BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00019844
         (759 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW11349.1| hypothetical protein PHAVU_008G022600g [Phaseolus...    48   2e-08
ref|XP_002305305.1| pentatricopeptide repeat-containing family p...    45   3e-08
ref|XP_002305302.1| predicted protein [Populus trichocarpa]            48   7e-08
ref|NP_197102.2| pentatricopeptide repeat-containing protein [Ar...    46   1e-07
ref|XP_006373506.1| pentatricopeptide repeat-containing family p...    49   1e-07
ref|XP_002329308.1| predicted protein [Populus trichocarpa]            49   1e-07
emb|CAC01797.1| putative protein [Arabidopsis thaliana]                46   1e-07
dbj|BAD94238.1| hypothetical protein [Arabidopsis thaliana]            46   1e-07
ref|XP_006400128.1| hypothetical protein EUTSA_v10012887mg [Eutr...    47   2e-07
ref|XP_006400160.1| hypothetical protein EUTSA_v10012992mg [Eutr...    47   4e-07
ref|XP_002882233.1| pentatricopeptide repeat-containing protein ...    42   9e-07
ref|XP_006602983.1| PREDICTED: pentatricopeptide repeat-containi...    47   1e-06
ref|XP_006297147.1| hypothetical protein CARUB_v10013150mg [Caps...    42   2e-06
ref|XP_006430875.1| hypothetical protein CICLE_v10011236mg [Citr...    41   4e-06
ref|XP_002278999.1| PREDICTED: pentatricopeptide repeat-containi...    45   4e-06
emb|CAN63553.1| hypothetical protein VITISV_003195 [Vitis vinifera]    45   4e-06
ref|XP_006482336.1| PREDICTED: pentatricopeptide repeat-containi...    42   7e-06
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...    39   7e-06
ref|NP_186898.1| pentatricopeptide repeat-containing protein [Ar...    40   9e-06

>gb|ESW11349.1| hypothetical protein PHAVU_008G022600g [Phaseolus vulgaris]
          Length = 629

 Score = 47.8 bits (112), Expect(2) = 2e-08
 Identities = 21/60 (35%), Positives = 32/60 (53%)
 Frame = -3

Query: 730 LCHKNRGTDAYNLLCKSIEQHKIKPSNDTYSEVIDKLSQSGMLNVACKVFDLMKEHGHVP 551
           LC  NR  DA  +LC+ + + ++KP + TY  ++ KL   G    A  +  LM+ HG  P
Sbjct: 481 LCQMNRAIDACKILCRLVNEKQLKPWHSTYKLLVTKLLDQGGFADALPILGLMRNHGFPP 540



 Score = 37.4 bits (85), Expect(2) = 2e-08
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = -1

Query: 489 DDAFSFVSTIKKDRIYGKAC-IAMVNAFWKESRHSEAHDLVSRLPYIIAKSPEILKITKG 313
           DDA  F+  +   R    +  + M+ AF+K  RH EAH+ +S+ P  I    ++L +   
Sbjct: 556 DDAVLFLRAMTSKRFPSTSVFLRMLEAFFKHGRHEEAHNFLSKCPRFIRNDVDVLNLLYS 615

Query: 312 TSTDKTA 292
             + + A
Sbjct: 616 MKSKEAA 622


>ref|XP_002305305.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222848269|gb|EEE85816.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 646

 Score = 45.4 bits (106), Expect(2) = 3e-08
 Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
 Frame = -3

Query: 745 GFAVHL-----CHKNRGTDAYNLLCKSIEQHKIKPSNDTYSEVIDKLSQSGMLNVACKVF 581
           G+AV L     C KN   DA NLLC  + Q+ + P   TY  +I KL   G    A  + 
Sbjct: 488 GYAVELLVNAYCLKNTAMDACNLLCDYVCQNHLCPWQTTYKVLISKLLVQGAFKDALNLL 547

Query: 580 DLMKEHGHVPKI 545
            LM+ HG  P I
Sbjct: 548 GLMQSHGIPPFI 559



 Score = 39.3 bits (90), Expect(2) = 3e-08
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
 Frame = -1

Query: 489 DDAFSFVSTIKKDRIYG-KACIAMVNAFWKESRHSEAHDLVSRLPYIIAKSPEILKI--T 319
           DDA +F++ +   +       + M  AF+K  RH EA D +S+ P  I    ++L +  +
Sbjct: 573 DDAIAFMNAMTTKKFPSISVALRMFKAFFKAKRHGEAQDFLSKCPIYIRNRADVLNLFCS 632

Query: 318 KGTSTDKTAIEDS 280
           K  S D TA + S
Sbjct: 633 KKFSNDTTATDVS 645


>ref|XP_002305302.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score = 47.8 bits (112), Expect(2) = 7e-08
 Identities = 29/72 (40%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = -3

Query: 745 GFAVHL-----CHKNRGTDAYNLLCKSIEQHKIKPSNDTYSEVIDKLSQSGMLNVACKVF 581
           G+AV L     C KNR  DA NLLC  + Q+ + P   TY  +I KL   G    A  + 
Sbjct: 470 GYAVELLVNAYCLKNRAMDACNLLCDYVCQNHLCPWQTTYKVLISKLLVQGAFKDALNLL 529

Query: 580 DLMKEHGHVPKI 545
            LM+ HG  P I
Sbjct: 530 GLMQSHGIPPFI 541



 Score = 35.8 bits (81), Expect(2) = 7e-08
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -1

Query: 489 DDAFSFVSTIKKDRIYG-KACIAMVNAFWKESRHSEAHDLVSRLPYIIAKSPEILKI 322
           DDA +F++ +   +       + M  AF+K  RH EA D +S+ P  I    ++L +
Sbjct: 555 DDAIAFMNAMTTKKFPSISVALRMFKAFFKAKRHGEAQDFLSKCPIYIRNRADVLNL 611


>ref|NP_197102.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75246487|sp|Q8LPF1.1|PP387_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g15980, mitochondrial; Flags: Precursor
           gi|20856902|gb|AAM26690.1| AT5g15980/F1N13_120
           [Arabidopsis thaliana] gi|25090366|gb|AAN72285.1|
           At5g15980/F1N13_120 [Arabidopsis thaliana]
           gi|332004849|gb|AED92232.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 668

 Score = 45.8 bits (107), Expect(2) = 1e-07
 Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
 Frame = -3

Query: 757 YIIKGFAVHLCHKNRGTDAYNLLCKSIEQHKIKPSNDTYSEVI-----DKLSQSGMLNVA 593
           Y  +   +  C+KN+  DAY LL   + ++++KP + TY  ++      K+++ G    A
Sbjct: 504 YSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEA 563

Query: 592 CKVFDLMKEHGHVPKI 545
             +  +MK+HG  P I
Sbjct: 564 LSLLPIMKDHGFPPFI 579



 Score = 37.0 bits (84), Expect(2) = 1e-07
 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -1

Query: 486 DAFSFVSTIKKDRI-YGKACIAMVNAFWKESRHSEAHDLVSRLPYIIAKSPEILKITKGT 310
           +A  F+  +  +   Y    + +     K +RHSEA DL+S  P  I  +P++L++    
Sbjct: 594 EALGFLKAMTSNNFPYISVVLRVFETMMKSARHSEAQDLLSLCPNYIRNNPDVLELFNTM 653

Query: 309 STDKTAIE 286
             +++A+E
Sbjct: 654 KPNESAVE 661


>ref|XP_006373506.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550320328|gb|ERP51303.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 658

 Score = 48.9 bits (115), Expect(2) = 1e-07
 Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
 Frame = -3

Query: 745 GFAVHL-----CHKNRGTDAYNLLCKSIEQHKIKPSNDTYSEVIDKLSQSGMLNVACKVF 581
           G+AV L     C KNR  DA NLLC  + Q+++ P   TY  +I KL   G    A  + 
Sbjct: 500 GYAVELLVNAYCLKNRAGDACNLLCDYVCQNQLHPWRTTYKVLISKLLAQGGFKDALNLL 559

Query: 580 DLMKEHGHVPKI 545
            LM+ HG  P I
Sbjct: 560 GLMQSHGIPPYI 571



 Score = 33.9 bits (76), Expect(2) = 1e-07
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -1

Query: 489 DDAFSFVSTIKKDRIYG-KACIAMVNAFWKESRHSEAHDLVSRLPYIIAKSPEILKI 322
           DDA +F++ +   +       + +  AF+   RHSEA D +S+ P  I    ++L +
Sbjct: 585 DDAIAFMNAMTTKKFPSISVSLRLFEAFFNAKRHSEAQDFLSKCPVFIRNHADVLTL 641


>ref|XP_002329308.1| predicted protein [Populus trichocarpa]
          Length = 658

 Score = 48.9 bits (115), Expect(2) = 1e-07
 Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
 Frame = -3

Query: 745 GFAVHL-----CHKNRGTDAYNLLCKSIEQHKIKPSNDTYSEVIDKLSQSGMLNVACKVF 581
           G+AV L     C KNR  DA NLLC  + Q+++ P   TY  +I KL   G    A  + 
Sbjct: 500 GYAVELLVNAYCLKNRAGDACNLLCDYVCQNQLHPWRTTYKVLISKLLAQGGFKDALNLL 559

Query: 580 DLMKEHGHVPKI 545
            LM+ HG  P I
Sbjct: 560 GLMQSHGIPPYI 571



 Score = 33.9 bits (76), Expect(2) = 1e-07
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -1

Query: 489 DDAFSFVSTIKKDRIYG-KACIAMVNAFWKESRHSEAHDLVSRLPYIIAKSPEILKI 322
           DDA +F++ +   +       + +  AF+   RHSEA D +S+ P  I    ++L +
Sbjct: 585 DDAIAFMNAMTTKKFPSISVSLRLFEAFFNAKRHSEAQDFLSKCPVFIRNHADVLTL 641


>emb|CAC01797.1| putative protein [Arabidopsis thaliana]
          Length = 645

 Score = 45.8 bits (107), Expect(2) = 1e-07
 Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
 Frame = -3

Query: 757 YIIKGFAVHLCHKNRGTDAYNLLCKSIEQHKIKPSNDTYSEVI-----DKLSQSGMLNVA 593
           Y  +   +  C+KN+  DAY LL   + ++++KP + TY  ++      K+++ G    A
Sbjct: 481 YSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEA 540

Query: 592 CKVFDLMKEHGHVPKI 545
             +  +MK+HG  P I
Sbjct: 541 LSLLPIMKDHGFPPFI 556



 Score = 37.0 bits (84), Expect(2) = 1e-07
 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -1

Query: 486 DAFSFVSTIKKDRI-YGKACIAMVNAFWKESRHSEAHDLVSRLPYIIAKSPEILKITKGT 310
           +A  F+  +  +   Y    + +     K +RHSEA DL+S  P  I  +P++L++    
Sbjct: 571 EALGFLKAMTSNNFPYISVVLRVFETMMKSARHSEAQDLLSLCPNYIRNNPDVLELFNTM 630

Query: 309 STDKTAIE 286
             +++A+E
Sbjct: 631 KPNESAVE 638


>dbj|BAD94238.1| hypothetical protein [Arabidopsis thaliana]
          Length = 291

 Score = 45.8 bits (107), Expect(2) = 1e-07
 Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
 Frame = -3

Query: 757 YIIKGFAVHLCHKNRGTDAYNLLCKSIEQHKIKPSNDTYSEVI-----DKLSQSGMLNVA 593
           Y  +   +  C+KN+  DAY LL   + ++++KP + TY  ++      K+++ G    A
Sbjct: 127 YSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEA 186

Query: 592 CKVFDLMKEHGHVPKI 545
             +  +MK+HG  P I
Sbjct: 187 LSLLPIMKDHGFPPFI 202



 Score = 37.0 bits (84), Expect(2) = 1e-07
 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -1

Query: 486 DAFSFVSTIKKDRI-YGKACIAMVNAFWKESRHSEAHDLVSRLPYIIAKSPEILKITKGT 310
           +A  F+  +  +   Y    + +     K +RHSEA DL+S  P  I  +P++L++    
Sbjct: 217 EALGFLKAMTSNNFPYISVVLRVFETMMKSARHSEAQDLLSLCPNYIRNNPDVLELFNTM 276

Query: 309 STDKTAIE 286
             +++A+E
Sbjct: 277 KPNESAVE 284


>ref|XP_006400128.1| hypothetical protein EUTSA_v10012887mg [Eutrema salsugineum]
           gi|557101218|gb|ESQ41581.1| hypothetical protein
           EUTSA_v10012887mg [Eutrema salsugineum]
          Length = 671

 Score = 47.0 bits (110), Expect(2) = 2e-07
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = -3

Query: 757 YIIKGFAVHLCHKNRGTDAYNLLCKSIEQHKIKPSNDTYSEVI-----DKLSQSGMLNVA 593
           Y  +  A+  C+KN+  DA  LL   ++Q+++KP + TY  ++      K+++ G    A
Sbjct: 507 YAFEKLALAYCNKNQARDACKLLTAQVKQNQLKPRHSTYKLLVRNLLTKKIARDGGFEEA 566

Query: 592 CKVFDLMKEHGHVP 551
             +  LMK+HG  P
Sbjct: 567 LNLLPLMKDHGFPP 580



 Score = 34.7 bits (78), Expect(2) = 2e-07
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = -1

Query: 438 KACIAMVNAFWKESRHSEAHDLVSRLPYIIAKSPEILKITKGTSTDKTAIE 286
           K  +++     K +RHSEA DL+S  P  I    ++L++      +++A+E
Sbjct: 614 KLVLSVFETMMKSARHSEAQDLLSTCPSYIRNHSDVLELFNSMKPNESAVE 664


>ref|XP_006400160.1| hypothetical protein EUTSA_v10012992mg [Eutrema salsugineum]
           gi|557101250|gb|ESQ41613.1| hypothetical protein
           EUTSA_v10012992mg [Eutrema salsugineum]
          Length = 613

 Score = 47.0 bits (110), Expect(2) = 4e-07
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = -3

Query: 757 YIIKGFAVHLCHKNRGTDAYNLLCKSIEQHKIKPSNDTYSEVI-----DKLSQSGMLNVA 593
           Y  +  A+  C+KN+  DA  LL   ++Q+++KP + TY  ++      K+++ G    A
Sbjct: 449 YAFEKLALAYCNKNQARDACKLLSAQVKQNQLKPRHSTYKLLVRNLLTKKIARDGGFEEA 508

Query: 592 CKVFDLMKEHGHVP 551
             +  LMK+HG  P
Sbjct: 509 LSLLPLMKDHGFPP 522



 Score = 33.9 bits (76), Expect(2) = 4e-07
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -1

Query: 438 KACIAMVNAFWKESRHSEAHDLVSRLPYIIAKSPEILKITKGTSTDKTAIE 286
           K  + +     K +RHSEA DL+S  P  I    ++L++      +++A+E
Sbjct: 556 KLVLRVFETMMKSARHSEAQDLLSTCPSYIRNHSDVLELFNSMKPNESAVE 606


>ref|XP_002882233.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297328073|gb|EFH58492.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 667

 Score = 42.0 bits (97), Expect(2) = 9e-07
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = -1

Query: 486 DAFSFVSTIKKDRIYGKACIAMV-NAFWKESRHSEAHDLVSRLPYIIAKSPEILKITKGT 310
           +AF+F+  +   +    + +  V  A  K +RHSEA DL+S  P  I ++ E+L++    
Sbjct: 589 EAFAFLKAVTSKKFPSNSMVLRVFEAMLKSARHSEAQDLLSMSPSYIRRNAEVLELFNSM 648

Query: 309 STDKTAIE 286
             DK ++E
Sbjct: 649 KPDKCSLE 656



 Score = 37.7 bits (86), Expect(2) = 9e-07
 Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
 Frame = -3

Query: 757 YIIKGFAVHLCHKNRGTDAYNLLCKSIEQHKIKPSNDTYSEVI-----DKLSQSGMLNVA 593
           Y  +   +  C+  +  D Y L  + ++Q+++KP + TY  ++      K+++ G    A
Sbjct: 499 YAFEKLVLAYCNSFQARDVYKLFTELVKQNQLKPWHSTYKIMVRNLLMKKVARDGGFEEA 558

Query: 592 CKVFDLMKEHGHVP 551
             +  +MK HG  P
Sbjct: 559 LSLLPMMKNHGFPP 572


>ref|XP_006602983.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like isoform X1 [Glycine max]
           gi|571549695|ref|XP_006602984.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like isoform X2 [Glycine max]
          Length = 629

 Score = 46.6 bits (109), Expect(2) = 1e-06
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = -3

Query: 727 CHKNRGTDAYNLLCKSIEQHKIKPSNDTYSEVIDKLSQSGMLNVACKVFDLMKEHGHVP 551
           C  NR  DA  +LC+ + + ++KP + TY  ++ KL   G    A  +  LM+ HG  P
Sbjct: 482 CQMNRAVDASKILCRLVNEKQLKPWHSTYKLLVTKLLVQGGFTDALNILGLMRTHGFPP 540



 Score = 32.7 bits (73), Expect(2) = 1e-06
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -1

Query: 489 DDAFSFVSTIKKDRIYGKAC-IAMVNAFWKESRHSEAHDLVSRLPYIIAKSPEILKI 322
           DDA  F+  +   R    +  + M  AF+K  RH EA + +S+ P  I    ++L +
Sbjct: 556 DDAVLFLKAMTSKRFPSTSMFLRMFEAFFKHRRHEEAQNFLSKCPRYIRNHADVLNL 612


>ref|XP_006297147.1| hypothetical protein CARUB_v10013150mg [Capsella rubella]
           gi|482565856|gb|EOA30045.1| hypothetical protein
           CARUB_v10013150mg [Capsella rubella]
          Length = 666

 Score = 42.0 bits (97), Expect(2) = 2e-06
 Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
 Frame = -1

Query: 486 DAFSFVSTIKKDRIYGKA-CIAMVNAFWKESRHSEAHDLVSRLPYIIAKSPEILKITKGT 310
           +AF+F+  +   +    +  + ++ A  K +RHSEA DL+S  P  I ++ E+L++    
Sbjct: 588 EAFAFLKAVTSKKFPSNSMALRVLEAMLKSARHSEAQDLLSMCPSYIRRNAEVLELFNSM 647

Query: 309 STDKTAIE 286
             DK ++E
Sbjct: 648 KPDKCSLE 655



 Score = 36.6 bits (83), Expect(2) = 2e-06
 Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
 Frame = -3

Query: 757 YIIKGFAVHLCHKNRGTDAYNLLCKSIEQHKIKPSNDTYSEVI-----DKLSQSGMLNVA 593
           Y  +   +  C+  +  DAY L  + ++Q+++KP + TY  ++      K+++ G    A
Sbjct: 498 YAFEKLVLAYCNSFKARDAYKLFTELVKQNQLKPWHSTYKIMVRNLLMKKVARDGGFEEA 557

Query: 592 CKVFDLMKEHGHVP 551
             +  +MK  G  P
Sbjct: 558 LSLLPMMKNQGFPP 571


>ref|XP_006430875.1| hypothetical protein CICLE_v10011236mg [Citrus clementina]
           gi|557532932|gb|ESR44115.1| hypothetical protein
           CICLE_v10011236mg [Citrus clementina]
          Length = 671

 Score = 41.2 bits (95), Expect(2) = 4e-06
 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
 Frame = -3

Query: 745 GFAVHL-----CHKNRGTDAYNLLCKSIEQHKIKPSNDTYSEVIDKLSQSGMLNVACKVF 581
           GFA+ L     C KNR  DA   +   + ++ +KP + TY E+I  L        A  + 
Sbjct: 514 GFAIDLLVNTYCSKNRAIDACKFVHNCVCEYDLKPWHTTYKELIKNLLVQRGFKDALSLL 573

Query: 580 DLMKEHGHVP 551
            LMK+HG  P
Sbjct: 574 CLMKDHGFPP 583



 Score = 36.2 bits (82), Expect(2) = 4e-06
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = -1

Query: 489 DDAFSFVSTIKKDRIYGKACI-AMVNAFWKESRHSEAHDLVSRLPYIIAKSPEILKI 322
           DDA +F+  +   R    + +  +  AF++  RHSEA DL+S+ P  I    ++L +
Sbjct: 599 DDAIAFLKGMTSKRFPSMSVVLCLFEAFFQARRHSEAQDLLSKCPRYIRNHADVLNL 655


>ref|XP_002278999.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Vitis vinifera]
          Length = 650

 Score = 44.7 bits (104), Expect(2) = 4e-06
 Identities = 23/59 (38%), Positives = 28/59 (47%)
 Frame = -3

Query: 727 CHKNRGTDAYNLLCKSIEQHKIKPSNDTYSEVIDKLSQSGMLNVACKVFDLMKEHGHVP 551
           C K R  DA  LLC    + K KP + TY  +I KL   G    A  +  LMK+H   P
Sbjct: 507 CCKGRSVDACGLLCDLASKEKFKPWHSTYKLLISKLLVQGGFQAALNLLGLMKDHEFPP 565



 Score = 32.7 bits (73), Expect(2) = 4e-06
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -1

Query: 489 DDAFSFVSTIKKDRIYGKACIAMV-NAFWKESRHSEAHDLVSRLPYIIAKSPEILKI 322
           DDA +F+  +   R    +       AF+K  RH+EA D +S+ P  I    ++L +
Sbjct: 581 DDAITFLRAMTVKRFPSTSVFLQTFEAFFKAGRHNEAQDFLSKCPGYIRNHADVLNL 637


>emb|CAN63553.1| hypothetical protein VITISV_003195 [Vitis vinifera]
          Length = 650

 Score = 44.7 bits (104), Expect(2) = 4e-06
 Identities = 23/59 (38%), Positives = 28/59 (47%)
 Frame = -3

Query: 727 CHKNRGTDAYNLLCKSIEQHKIKPSNDTYSEVIDKLSQSGMLNVACKVFDLMKEHGHVP 551
           C K R  DA  LLC    + K KP + TY  +I KL   G    A  +  LMK+H   P
Sbjct: 507 CCKGRSVDACGLLCDLASKEKFKPWHSTYKLLISKLLVQGGFQAALNLLGLMKDHEFPP 565



 Score = 32.7 bits (73), Expect(2) = 4e-06
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -1

Query: 489 DDAFSFVSTIKKDRIYGKACIAMV-NAFWKESRHSEAHDLVSRLPYIIAKSPEILKI 322
           DDA +F+  +   R    +       AF+K  RH+EA D +S+ P  I    ++L +
Sbjct: 581 DDAITFLRAMTVKRFPSTSVFLQTFEAFFKAGRHNEAQDFLSKCPGYIRNHADVLNL 637


>ref|XP_006482336.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Citrus sinensis]
          Length = 671

 Score = 41.6 bits (96), Expect(2) = 7e-06
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
 Frame = -3

Query: 745 GFAVHL-----CHKNRGTDAYNLLCKSIEQHKIKPSNDTYSEVIDKLSQSGMLNVACKVF 581
           G+A+ L     C KNR  DA   +   + ++ +KP + TY E+I  L        A  + 
Sbjct: 514 GYAIDLLVNTYCSKNRAIDACKFVHNCVREYDLKPWHTTYEELIKNLLVQRGFKDALSLL 573

Query: 580 DLMKEHGHVP 551
            LMK+HG  P
Sbjct: 574 CLMKDHGFPP 583



 Score = 35.0 bits (79), Expect(2) = 7e-06
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = -1

Query: 489 DDAFSFVSTIKKDRIYGKACI-AMVNAFWKESRHSEAHDLVSRLPYIIAKSPEILKI 322
           DDA +F+  +   R    + +  +  AF++  RHSEA DL+S+ P  +    ++L +
Sbjct: 599 DDAIAFLKGMTSKRFPSMSVVLCLFAAFFQARRHSEAQDLLSKCPRYVRNHADVLNL 655


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score = 38.5 bits (88), Expect(2) = 7e-06
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = -1

Query: 492 VDDAFSFVSTIK-KDRIYGKACIAMVNAFWKESRHSEAHDLVSRLPYIIAKSPEILKITK 316
           VDDA  F+  +  K+     A + +  +F++  RHSEA DL+ + P+ I K P+I ++  
Sbjct: 559 VDDAADFLKALSVKEYPSTSAYLNVFQSFFRAGRHSEAKDLLFKCPHHIRKHPKISELFG 618

Query: 315 GTSTD 301
              T+
Sbjct: 619 SAKTE 623



 Score = 38.1 bits (87), Expect(2) = 7e-06
 Identities = 21/61 (34%), Positives = 32/61 (52%)
 Frame = -3

Query: 703 AYNLLCKSIEQHKIKPSNDTYSEVIDKLSQSGMLNVACKVFDLMKEHGHVPKISIPLVQP 524
           AY L    +++ +++P   TY  +I+KL +   L  A  +  LMK+H H P    P VQ 
Sbjct: 494 AYTLFMDMVDKARLRPWQATYKLLIEKLLEVRKLEEALNLLRLMKQHNH-PPFPEPFVQY 552

Query: 523 I 521
           I
Sbjct: 553 I 553


>ref|NP_186898.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75264846|sp|Q9M891.1|PP208_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g02490, mitochondrial; Flags: Precursor
           gi|6957712|gb|AAF32456.1| unknown protein [Arabidopsis
           thaliana] gi|51536500|gb|AAU05488.1| At3g02490
           [Arabidopsis thaliana] gi|56381951|gb|AAV85694.1|
           At3g02490 [Arabidopsis thaliana]
           gi|332640296|gb|AEE73817.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score = 39.7 bits (91), Expect(2) = 9e-06
 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = -1

Query: 486 DAFSFVSTIKKDRIYGKACIAMV-NAFWKESRHSEAHDLVSRLPYIIAKSPEILKITKGT 310
           +AF+F+  +   +    + +  V  A  K +RHSEA DL+S  P  I ++ E+L++    
Sbjct: 587 EAFAFLKAVTSKKFPSNSMVLRVFEAMLKSARHSEAQDLLSMSPSYIRRNAEVLELFNTM 646

Query: 309 STDKTAIE 286
             +K ++E
Sbjct: 647 KPEKCSLE 654



 Score = 36.6 bits (83), Expect(2) = 9e-06
 Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
 Frame = -3

Query: 757 YIIKGFAVHLCHKNRGTDAYNLLCKSIEQHKIKPSNDTYSEVI-----DKLSQSGMLNVA 593
           Y  +   +  C+  +  D Y L  + ++Q+++KP + TY  ++      K+++ G    A
Sbjct: 497 YAFEKLVLAYCNSFQARDVYKLFSELVKQNQLKPWHSTYKIMVRNLLMKKVARDGGFEEA 556

Query: 592 CKVFDLMKEHGHVP 551
             +  +M+ HG  P
Sbjct: 557 LSLLPMMRNHGFPP 570