BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00019755
         (501 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001765725.1| predicted protein [Physcomitrella patens] gi...   142   4e-32
ref|XP_002122165.2| PREDICTED: DNA-dependent protein kinase cata...    63   5e-08
ref|XP_002110143.1| hypothetical protein TRIADDRAFT_20924 [Trich...    59   7e-07
ref|XP_001626382.1| predicted protein [Nematostella vectensis] g...    58   2e-06
ref|XP_004350354.1| DNA-dependent protein kinase subunit [Dictyo...    56   4e-06
gb|EFA79656.1| DNA-dependent protein kinase subunit [Polysphondy...    56   4e-06

>ref|XP_001765725.1| predicted protein [Physcomitrella patens] gi|162683151|gb|EDQ69564.1|
            predicted protein [Physcomitrella patens]
          Length = 4165

 Score =  142 bits (359), Expect = 4e-32
 Identities = 72/165 (43%), Positives = 99/165 (60%)
 Frame = +3

Query: 6    MIDVHILELLFFCIKSIRIASTDDMGTGSDKILNKVITGLQMLVERNMNLLLKTKKDRKL 185
            ++D +I E+LFFCIKS+++   DD   G+ K +NK +  LQ LV RN+ LL K +KDR L
Sbjct: 1160 IVDRYIFEILFFCIKSLKLGELDDEQIGTMKQMNKTVELLQRLVTRNITLLEKKRKDRPL 1219

Query: 186  FSSIHDFLDWLFNQTCRPEENCRKTCMGLFSSICKLSPVGSPANWFKNKFSSPKQITSAM 365
            F ++ DFL W+F QT       R  CM LF SIC   P  S A+WF+    S  Q++S +
Sbjct: 1220 FLALDDFLQWVFEQTRLLHGRSRTKCMMLFCSICLSIPGCSSAHWFRANICSGDQVSSTV 1279

Query: 366  KVFDIELQYPEGPIEKNYVHLLNLWMAKFVCSIHWYGWALNEGLV 500
            K FD+ + YP  P     +    LW+ KFV SIHW+ WAL E ++
Sbjct: 1280 KQFDVGMDYPHHP----SLQQEQLWLTKFVRSIHWFEWALKENII 1320


>ref|XP_002122165.2| PREDICTED: DNA-dependent protein kinase catalytic subunit [Ciona
            intestinalis]
          Length = 1306

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 12/178 (6%)
 Frame = +3

Query: 3    TMIDVHILELLFFCIKSIRIASTDDMGTGSDKILNKVITGLQMLVERNMNLLLKTKKDRK 182
            T++D  I E L   I S+ ++  D+M  G+ K+  + +  ++ ++    ++L K    R+
Sbjct: 1081 TLVDEFIFETLVTFINSLSLSHVDEMFIGTQKVCKQALEHIERIISVKSSMLCKPSDIRR 1140

Query: 183  L--------FSSIHDFLDWLFNQTCRPEENCRKTCMGLFSSICKLSPV--GSPANWFKNK 332
                       ++   ++WLF+Q  RP+  CR  CM LF    KL P    S  +W K K
Sbjct: 1141 TPRCFTNTTSITLSWIVEWLFDQCGRPQTECRHMCMHLFHEFIKLLPTEERSATSWVKRK 1200

Query: 333  FSSPKQITSAMKVFDIEL--QYPEGPIEKNYVHLLNLWMAKFVCSIHWYGWALNEGLV 500
             +      + +K F+  L    P    EK  + +L  W    + +I  Y W   + ++
Sbjct: 1201 LTK-YGAGNLVKRFEWGLVNMQPVLNKEKLTIKILCGWFDHVIAAIEVYSWLFQQKIL 1257


>ref|XP_002110143.1| hypothetical protein TRIADDRAFT_20924 [Trichoplax adhaerens]
            gi|190588267|gb|EDV28309.1| hypothetical protein
            TRIADDRAFT_20924, partial [Trichoplax adhaerens]
          Length = 4042

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 39/181 (21%), Positives = 80/181 (44%), Gaps = 15/181 (8%)
 Frame = +3

Query: 3    TMIDVHILELLFFCIKSIRIASTDDMGTGSDKILNKVITGLQMLVERNMNLLLKTKKDRK 182
            T++D  I E+L   + S+ ++ TD+   G+ + L+K +  ++ +++   + L K  K+R+
Sbjct: 1026 TLVDTFIFEILVNYVNSLALSHTDEKSLGTQEQLSKALAHIERIIKAKASTLNKESKNRR 1085

Query: 183  LFS-------SIHDFLDWLFNQTCRPEENCRKTCMGLFSSIC-KLSPVGSPANWFKNKFS 338
              +       ++H  ++WL  Q  RP+  CR  CM L   +  +LS V +  +W K    
Sbjct: 1086 TPTGFMTKTVTLHHVVNWLVRQCGRPQTACRHQCMQLVYGLAPQLSGVSTIQDWVKTIIG 1145

Query: 339  SPKQITSAMKVFDIELQYPEGPIEKNY-------VHLLNLWMAKFVCSIHWYGWALNEGL 497
            S        +      +Y  G  +          +  +  W   F+ ++  Y W  +E +
Sbjct: 1146 SSSVTFFITRFEGGGSKYGIGRYQTALDISDTFNLRSMKNWYDYFLAALDCYSWVFSEKM 1205

Query: 498  V 500
            +
Sbjct: 1206 M 1206


>ref|XP_001626382.1| predicted protein [Nematostella vectensis]
            gi|156213256|gb|EDO34282.1| predicted protein
            [Nematostella vectensis]
          Length = 1495

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 12/121 (9%)
 Frame = +3

Query: 3    TMIDVHILELLFFCIKSIRIASTDDMGTGSDKILNKVITGLQMLVERNMNLLLKTKKDRK 182
            +++DV +LE+L   ++S+ +A TDD   G+    ++VI+ L+ +++    LL K  K R+
Sbjct: 934  SLVDVFVLEILVTYLESLALAHTDDPAQGTQDQCSQVISHLERIIKTKATLLDKENKQRR 993

Query: 183  L--------FSSIHDFLDWLFNQTCRPEENCRKTCMGLFSSICKLSP----VGSPANWFK 326
            +          ++   +  L     +P+  CR  CM L   +C+++P    +GS A W K
Sbjct: 994  IPRGFQMLDSITLSHLIPLLIKLCGKPQTECRHQCMKL---VCQVTPLLHGIGSAAIWMK 1050

Query: 327  N 329
            N
Sbjct: 1051 N 1051


>ref|XP_004350354.1| DNA-dependent protein kinase subunit [Dictyostelium fasciculatum]
           gi|328865264|gb|EGG13650.1| DNA-dependent protein kinase
           subunit [Dictyostelium fasciculatum]
          Length = 3111

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 28/194 (14%)
 Frame = +3

Query: 3   TMIDVHILELLFFCIKSIRIAST--------------DDMGTGS---DKILNK---VITG 122
           T++   I EL+   + S+RI+S+              DD G  S   D+I NK   V+T 
Sbjct: 35  TLVTQFIFELMHMVLLSLRISSSSSSIRGAGEGGDKGDDDGAASSENDEIANKLSHVLTV 94

Query: 123 LQMLVERNMNLLLKTKKDRKLFSSIHDFLDWLFNQTC-RPEENCRKTCMGLFSSICKLSP 299
           +  ++ER +++L K+   R+  + +  F+ WLF + C R E   R   + LF  +  + P
Sbjct: 95  MVKVIERKLDILNKSNAQRREHTDLQAFVLWLFKECCGRTESRARTEAILLFQRLVVMLP 154

Query: 300 -VGSPANWFKNKFSSPKQITSAMKVFD--IELQYPEGPIEKN----YVHLLNLWMAKFVC 458
            + S + W K+       I   M+V +    L  P G  +       V  +  W      
Sbjct: 155 GIKSGSQWIKDNIKK-HGIGFIMEVAEPANSLSPPTGSKKSGGSAPTVAEIEFWFKHLQT 213

Query: 459 SIHWYGWALNEGLV 500
           S+H Y W L+E  +
Sbjct: 214 SLHVYTWYLSESFI 227


>gb|EFA79656.1| DNA-dependent protein kinase subunit [Polysphondylium pallidum PN500]
          Length = 4074

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 20/183 (10%)
 Frame = +3

Query: 6    MIDVHILELLFFCIKSIRIAST-----DDMGTGSDKI---LNKVITGLQMLVERNMNLLL 161
            +I V + E+    + S+R+        DD  T   ++   L  VI  +  ++ER   LL 
Sbjct: 1100 LISVFLFEIAHQVLLSMRLCGAVADEGDDTTTLEVEVGEKLQAVIDAVVRVIERRAELLN 1159

Query: 162  KTKKDRKLFSSIHDFLDWLFNQTCRPEENCRKTCMGLFSSICKLSPVGSPAN-WFKN--- 329
            +T  +R+    + DF+ W+F +  R E   R T + LF  + +L P    AN W ++   
Sbjct: 1160 RTNNNRREHKDLADFVGWVFGEVGRMERRVRFTSIALFGRVVQLLPGQKRANIWIQHQVK 1219

Query: 330  --------KFSSPKQITSAMKVFDIELQYPEGPIEKNYVHLLNLWMAKFVCSIHWYGWAL 485
                    K + P Q  SAM         P      N+ H +  WM +   S+  Y W  
Sbjct: 1220 QHGLAALIKMAEPPQTASAM---------PPKLDGNNHRH-VEFWMRRLQASLAVYIWYF 1269

Query: 486  NEG 494
             EG
Sbjct: 1270 GEG 1272