BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00019750
         (543 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001785966.1| histone H3 [Physcomitrella patens] gi|162662...   117   2e-24
ref|XP_002970101.1| hypothetical protein SELMODRAFT_171192 [Sela...   110   2e-22
dbj|BAL45431.1| centromere specific histone H3 variant [Allium t...   107   1e-21
gb|AHH01567.1| centromere-specific histone H3 variant [Lotus jap...   103   3e-20
emb|CCO14525.1| histone H3 [Bathycoccus prasinos]                     103   3e-20
ref|XP_005647377.1| histone-fold-containing protein [Coccomyxa s...   101   1e-19
dbj|BAL45430.1| centromere specific histone H3 variant [Allium s...   101   1e-19
dbj|BAL45432.1| centromere specific histone H3 variant [Allium c...   101   1e-19
dbj|BAL45429.1| centromere specific histone H3 variant [Allium f...   101   1e-19
ref|XP_004306687.1| PREDICTED: histone H3-like centromeric prote...   100   2e-19
gb|AFK37617.1| unknown [Lotus japonicus]                              100   2e-19
ref|XP_005702721.1| histone H3 [Galdieria sulphuraria] gi|452819...   100   2e-19
ref|XP_002281073.1| PREDICTED: histone H3-like centromeric prote...   100   2e-19
gb|EWM27785.1| histone h3 [Nannochloropsis gaditana]                  100   3e-19
gb|EXB79991.1| Histone H3-like centromeric protein [Morus notabi...    99   5e-19
ref|XP_005849451.1| hypothetical protein CHLNCDRAFT_20865, parti...    99   5e-19
ref|XP_002958803.1| hypothetical protein VOLCADRAFT_69930 [Volvo...    99   5e-19
gb|ACX30894.1| CENH3 [Oryza punctata] gi|260072761|gb|ACX30896.1...    99   7e-19
gb|ACX30892.1| CENH3 [Oryza minuta] gi|260072759|gb|ACX30895.1| ...    99   7e-19
gb|ACX30891.1| CENH3 [Oryza minuta] gi|260072763|gb|ACX30897.1| ...    99   7e-19

>ref|XP_001785966.1| histone H3 [Physcomitrella patens] gi|162662346|gb|EDQ49221.1|
           histone H3 [Physcomitrella patens]
          Length = 128

 Score =  117 bits (292), Expect = 2e-24
 Identities = 53/71 (74%), Positives = 62/71 (87%)
 Frame = -1

Query: 543 PSLPFVRLVRETTALYSHDVNRWTAEAFTALQEAAEDYIVHLFEDTNLCALHAKRVTIMP 364
           P LPF R V+E T +Y+ DV+RWTAEA TALQEA EDY+ HLFEDTNLCA+HAKRVTIMP
Sbjct: 55  PRLPFARYVKEITMMYASDVSRWTAEALTALQEATEDYMCHLFEDTNLCAIHAKRVTIMP 114

Query: 363 RDMQLARRIRG 331
           +D+QLARR+RG
Sbjct: 115 KDLQLARRLRG 125


>ref|XP_002970101.1| hypothetical protein SELMODRAFT_171192 [Selaginella moellendorffii]
           gi|302806908|ref|XP_002985185.1| hypothetical protein
           SELMODRAFT_121910 [Selaginella moellendorffii]
           gi|300147013|gb|EFJ13679.1| hypothetical protein
           SELMODRAFT_121910 [Selaginella moellendorffii]
           gi|300162612|gb|EFJ29225.1| hypothetical protein
           SELMODRAFT_171192 [Selaginella moellendorffii]
          Length = 126

 Score =  110 bits (275), Expect = 2e-22
 Identities = 50/69 (72%), Positives = 60/69 (86%)
 Frame = -1

Query: 537 LPFVRLVRETTALYSHDVNRWTAEAFTALQEAAEDYIVHLFEDTNLCALHAKRVTIMPRD 358
           LPF R+VRE T ++S +V+RWTAE   ALQEAAEDY+VHLFEDTNLCA+H KRVTIMP+D
Sbjct: 52  LPFARVVREITNVFSSEVSRWTAEGLIALQEAAEDYLVHLFEDTNLCAIHGKRVTIMPKD 111

Query: 357 MQLARRIRG 331
           + LARR+RG
Sbjct: 112 LHLARRLRG 120


>dbj|BAL45431.1| centromere specific histone H3 variant [Allium tuberosum]
          Length = 154

 Score =  107 bits (268), Expect = 1e-21
 Identities = 50/73 (68%), Positives = 61/73 (83%)
 Frame = -1

Query: 543 PSLPFVRLVRETTALYSHDVNRWTAEAFTALQEAAEDYIVHLFEDTNLCALHAKRVTIMP 364
           P+ PF+RLVRETT LYS DV RWT EA TA+QEAAE +IV++ E+ NLCA+HAKRVT+M 
Sbjct: 79  PAAPFIRLVRETTNLYSRDVTRWTPEALTAIQEAAEIFIVNMLEEANLCAIHAKRVTVMQ 138

Query: 363 RDMQLARRIRGVR 325
           +D+QLARRI G R
Sbjct: 139 KDIQLARRIGGAR 151


>gb|AHH01567.1| centromere-specific histone H3 variant [Lotus japonicus]
          Length = 159

 Score =  103 bits (257), Expect = 3e-20
 Identities = 48/72 (66%), Positives = 61/72 (84%)
 Frame = -1

Query: 543 PSLPFVRLVRETTALYSHDVNRWTAEAFTALQEAAEDYIVHLFEDTNLCALHAKRVTIMP 364
           P+ PF+RLVRETT   S +V+RWTAEA  ALQEAAEDY+V +FED  LCA+HAKRVT+M 
Sbjct: 84  PAAPFLRLVRETTRQLSFEVSRWTAEAVVALQEAAEDYLVTMFEDGMLCAIHAKRVTLMK 143

Query: 363 RDMQLARRIRGV 328
           +D++LARR+RG+
Sbjct: 144 KDIELARRLRGI 155


>emb|CCO14525.1| histone H3 [Bathycoccus prasinos]
          Length = 121

 Score =  103 bits (256), Expect = 3e-20
 Identities = 49/69 (71%), Positives = 57/69 (82%)
 Frame = -1

Query: 537 LPFVRLVRETTALYSHDVNRWTAEAFTALQEAAEDYIVHLFEDTNLCALHAKRVTIMPRD 358
           LPF RLVRE    ++    RWTAEA  ALQE++ED++VHLFED NLCA+HAKRVTIMP+D
Sbjct: 45  LPFARLVREICNEFTDQPMRWTAEALLALQESSEDFLVHLFEDCNLCAIHAKRVTIMPKD 104

Query: 357 MQLARRIRG 331
           MQLARRIRG
Sbjct: 105 MQLARRIRG 113


>ref|XP_005647377.1| histone-fold-containing protein [Coccomyxa subellipsoidea C-169]
           gi|384249351|gb|EIE22833.1| histone-fold-containing
           protein [Coccomyxa subellipsoidea C-169]
          Length = 150

 Score =  101 bits (252), Expect = 1e-19
 Identities = 47/69 (68%), Positives = 57/69 (82%)
 Frame = -1

Query: 537 LPFVRLVRETTALYSHDVNRWTAEAFTALQEAAEDYIVHLFEDTNLCALHAKRVTIMPRD 358
           LPF RL RE T +++ +  RWTAEA  A+QEA ED++VHL ED NLCA+HAKRVTIMP+D
Sbjct: 74  LPFARLCREITNIFAPEPFRWTAEALLAMQEATEDFMVHLLEDCNLCAIHAKRVTIMPKD 133

Query: 357 MQLARRIRG 331
           +QLARRIRG
Sbjct: 134 LQLARRIRG 142


>dbj|BAL45430.1| centromere specific histone H3 variant [Allium sativum]
          Length = 154

 Score =  101 bits (252), Expect = 1e-19
 Identities = 46/73 (63%), Positives = 60/73 (82%)
 Frame = -1

Query: 543 PSLPFVRLVRETTALYSHDVNRWTAEAFTALQEAAEDYIVHLFEDTNLCALHAKRVTIMP 364
           P+ PF+RLVRE T LYS +VNRWT EA  A+QEAAE ++++L ++ NLCA+HAKRVT+M 
Sbjct: 79  PAAPFIRLVREITMLYSKEVNRWTPEALLAIQEAAEFFLINLLQEANLCAIHAKRVTVMQ 138

Query: 363 RDMQLARRIRGVR 325
           +D+QLARRI G R
Sbjct: 139 KDIQLARRIGGSR 151


>dbj|BAL45432.1| centromere specific histone H3 variant [Allium cepa]
          Length = 154

 Score =  101 bits (251), Expect = 1e-19
 Identities = 47/73 (64%), Positives = 59/73 (80%)
 Frame = -1

Query: 543 PSLPFVRLVRETTALYSHDVNRWTAEAFTALQEAAEDYIVHLFEDTNLCALHAKRVTIMP 364
           P+ PF+RLVRE T LYS +V RWT EA  A+QEAAE +I++L E+ NLCA+HAKRVT+M 
Sbjct: 79  PAAPFIRLVREITNLYSKEVTRWTPEALLAIQEAAEFFIINLLEEANLCAIHAKRVTLMQ 138

Query: 363 RDMQLARRIRGVR 325
           +D+QLARRI G R
Sbjct: 139 KDIQLARRIGGAR 151


>dbj|BAL45429.1| centromere specific histone H3 variant [Allium fistulosum]
          Length = 154

 Score =  101 bits (251), Expect = 1e-19
 Identities = 47/73 (64%), Positives = 59/73 (80%)
 Frame = -1

Query: 543 PSLPFVRLVRETTALYSHDVNRWTAEAFTALQEAAEDYIVHLFEDTNLCALHAKRVTIMP 364
           P+ PF+RLVRE T LYS +V RWT EA  A+QEAAE +I++L E+ NLCA+HAKRVT+M 
Sbjct: 79  PAAPFIRLVREITNLYSKEVTRWTPEALLAIQEAAEFFIINLLEEANLCAIHAKRVTLMQ 138

Query: 363 RDMQLARRIRGVR 325
           +D+QLARRI G R
Sbjct: 139 KDIQLARRIGGAR 151


>ref|XP_004306687.1| PREDICTED: histone H3-like centromeric protein HTR12-like [Fragaria
           vesca subsp. vesca]
          Length = 170

 Score =  100 bits (250), Expect = 2e-19
 Identities = 45/72 (62%), Positives = 58/72 (80%)
 Frame = -1

Query: 543 PSLPFVRLVRETTALYSHDVNRWTAEAFTALQEAAEDYIVHLFEDTNLCALHAKRVTIMP 364
           PS PF+R VRE ++  S+DV RWTAEA   + EAAEDY+VHLFED+ LCA+HAKRVT+M 
Sbjct: 95  PSAPFIRCVREISSTLSNDVTRWTAEALQCIHEAAEDYLVHLFEDSMLCAIHAKRVTLMR 154

Query: 363 RDMQLARRIRGV 328
           +D +LARR+ G+
Sbjct: 155 KDFELARRLGGI 166


>gb|AFK37617.1| unknown [Lotus japonicus]
          Length = 159

 Score =  100 bits (250), Expect = 2e-19
 Identities = 47/72 (65%), Positives = 60/72 (83%)
 Frame = -1

Query: 543 PSLPFVRLVRETTALYSHDVNRWTAEAFTALQEAAEDYIVHLFEDTNLCALHAKRVTIMP 364
           P+ PF+RLVRETT   S +V+RWTAEA  A QEAAEDY+V +FED  LCA+HAKRVT+M 
Sbjct: 84  PAAPFLRLVRETTRQLSFEVSRWTAEAVVAPQEAAEDYLVTMFEDGMLCAIHAKRVTLMK 143

Query: 363 RDMQLARRIRGV 328
           +D++LARR+RG+
Sbjct: 144 KDIELARRLRGI 155


>ref|XP_005702721.1| histone H3 [Galdieria sulphuraria] gi|452819111|gb|EME26201.1|
           histone H3 [Galdieria sulphuraria]
          Length = 146

 Score =  100 bits (249), Expect = 2e-19
 Identities = 50/73 (68%), Positives = 57/73 (78%)
 Frame = -1

Query: 537 LPFVRLVRETTALYSHDVNRWTAEAFTALQEAAEDYIVHLFEDTNLCALHAKRVTIMPRD 358
           LPF RLV+E T  Y H++ RW  EA  ALQ +AEDY+V L ED NLCA+HAKRVTIMP+D
Sbjct: 70  LPFARLVKEITQHYHHEL-RWQVEAVLALQTSAEDYLVGLLEDANLCAIHAKRVTIMPKD 128

Query: 357 MQLARRIRGVRAD 319
           MQLARRIRG R D
Sbjct: 129 MQLARRIRGYRDD 141


>ref|XP_002281073.1| PREDICTED: histone H3-like centromeric protein HTR12 [Vitis
           vinifera] gi|297745416|emb|CBI40496.3| unnamed protein
           product [Vitis vinifera]
          Length = 156

 Score =  100 bits (249), Expect = 2e-19
 Identities = 45/71 (63%), Positives = 58/71 (81%)
 Frame = -1

Query: 543 PSLPFVRLVRETTALYSHDVNRWTAEAFTALQEAAEDYIVHLFEDTNLCALHAKRVTIMP 364
           P+ PF+R VRE +  ++ +++RWTAEA  ALQEAAEDY+VHLFED  LCA+HAKRVT+M 
Sbjct: 81  PAAPFIRTVREISYFFAPEISRWTAEALVALQEAAEDYLVHLFEDAMLCAIHAKRVTLMK 140

Query: 363 RDMQLARRIRG 331
           +D +LARRI G
Sbjct: 141 KDWELARRIGG 151


>gb|EWM27785.1| histone h3 [Nannochloropsis gaditana]
          Length = 224

 Score =  100 bits (248), Expect = 3e-19
 Identities = 50/75 (66%), Positives = 55/75 (73%)
 Frame = -1

Query: 537 LPFVRLVRETTALYSHDVNRWTAEAFTALQEAAEDYIVHLFEDTNLCALHAKRVTIMPRD 358
           LPF RLVRE     S    RW A +  ALQEAAE ++VHLFED NLCA+HAKRVTIMP+D
Sbjct: 80  LPFARLVREVQGEISTKQYRWQANSLLALQEAAEAHLVHLFEDANLCAIHAKRVTIMPKD 139

Query: 357 MQLARRIRGVRADRP 313
           MQLARRIRG   D P
Sbjct: 140 MQLARRIRGPLRDHP 154


>gb|EXB79991.1| Histone H3-like centromeric protein [Morus notabilis]
          Length = 129

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 47/71 (66%), Positives = 57/71 (80%)
 Frame = -1

Query: 543 PSLPFVRLVRETTALYSHDVNRWTAEAFTALQEAAEDYIVHLFEDTNLCALHAKRVTIMP 364
           PSLPF+R VRE T   S +V RW AEA  ALQEAAED++VHLFE++ LCA+HAKRVT+M 
Sbjct: 54  PSLPFIRCVREITKQLSPEVTRWQAEALLALQEAAEDFLVHLFEESMLCAIHAKRVTLMK 113

Query: 363 RDMQLARRIRG 331
           +D +LARRI G
Sbjct: 114 KDFELARRIGG 124


>ref|XP_005849451.1| hypothetical protein CHLNCDRAFT_20865, partial [Chlorella
           variabilis] gi|307109111|gb|EFN57349.1| hypothetical
           protein CHLNCDRAFT_20865, partial [Chlorella variabilis]
          Length = 105

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 48/69 (69%), Positives = 54/69 (78%)
 Frame = -1

Query: 537 LPFVRLVRETTALYSHDVNRWTAEAFTALQEAAEDYIVHLFEDTNLCALHAKRVTIMPRD 358
           +PF RL RE T   + +  RWTAE   ALQEA ED+IVHL ED NLCA+HAKRVTIMP+D
Sbjct: 29  MPFARLAREITNNVAPEPFRWTAEGLLALQEATEDFIVHLLEDCNLCAIHAKRVTIMPKD 88

Query: 357 MQLARRIRG 331
           MQLARRIRG
Sbjct: 89  MQLARRIRG 97


>ref|XP_002958803.1| hypothetical protein VOLCADRAFT_69930 [Volvox carteri f.
           nagariensis] gi|300255863|gb|EFJ40146.1| hypothetical
           protein VOLCADRAFT_69930 [Volvox carteri f. nagariensis]
          Length = 105

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 49/69 (71%), Positives = 55/69 (79%)
 Frame = -1

Query: 537 LPFVRLVRETTALYSHDVNRWTAEAFTALQEAAEDYIVHLFEDTNLCALHAKRVTIMPRD 358
           LPF RLVRE +     +  RWTAEA  ALQEA+ED +VHL ED NLCA+HAKRVTIMP+D
Sbjct: 29  LPFSRLVREISNTMLREPFRWTAEALLALQEASEDMLVHLLEDCNLCAIHAKRVTIMPKD 88

Query: 357 MQLARRIRG 331
           MQLARRIRG
Sbjct: 89  MQLARRIRG 97


>gb|ACX30894.1| CENH3 [Oryza punctata] gi|260072761|gb|ACX30896.1| CENH3 [Oryza
           punctata]
          Length = 166

 Score = 99.0 bits (245), Expect = 7e-19
 Identities = 50/73 (68%), Positives = 57/73 (78%)
 Frame = -1

Query: 543 PSLPFVRLVRETTALYSHDVNRWTAEAFTALQEAAEDYIVHLFEDTNLCALHAKRVTIMP 364
           P  PF RLVRE T  YS DV+RWT EA  ALQEAAE ++V +FE +NLCA+HAKRVTIM 
Sbjct: 92  PFAPFSRLVREITDFYSKDVSRWTLEALLALQEAAEYHLVDIFEVSNLCAIHAKRVTIMQ 151

Query: 363 RDMQLARRIRGVR 325
           +DMQLARRI G R
Sbjct: 152 KDMQLARRIGGRR 164


>gb|ACX30892.1| CENH3 [Oryza minuta] gi|260072759|gb|ACX30895.1| CENH3 [Oryza
           rhizomatis] gi|260072767|gb|ACX30899.1| CENH3 [Oryza
           minuta] gi|260072769|gb|ACX30900.1| CENH3 [Oryza
           rhizomatis] gi|313575522|gb|ADK35171.2| centromeric
           histone 3 [Oryza officinalis]
          Length = 166

 Score = 99.0 bits (245), Expect = 7e-19
 Identities = 50/73 (68%), Positives = 57/73 (78%)
 Frame = -1

Query: 543 PSLPFVRLVRETTALYSHDVNRWTAEAFTALQEAAEDYIVHLFEDTNLCALHAKRVTIMP 364
           P  PF RLVRE T  YS DV+RWT EA  ALQEAAE ++V +FE +NLCA+HAKRVTIM 
Sbjct: 92  PFAPFSRLVREITDFYSKDVSRWTLEAILALQEAAEYHLVDIFEVSNLCAIHAKRVTIMQ 151

Query: 363 RDMQLARRIRGVR 325
           +DMQLARRI G R
Sbjct: 152 KDMQLARRIGGRR 164


>gb|ACX30891.1| CENH3 [Oryza minuta] gi|260072763|gb|ACX30897.1| CENH3 [Oryza
           minuta]
          Length = 166

 Score = 99.0 bits (245), Expect = 7e-19
 Identities = 50/73 (68%), Positives = 57/73 (78%)
 Frame = -1

Query: 543 PSLPFVRLVRETTALYSHDVNRWTAEAFTALQEAAEDYIVHLFEDTNLCALHAKRVTIMP 364
           P  PF RLVRE T  YS DV+RWT EA  ALQEAAE ++V +FE +NLCA+HAKRVTIM 
Sbjct: 92  PFAPFSRLVREITDFYSKDVSRWTLEALLALQEAAEYHLVDIFEVSNLCAIHAKRVTIMQ 151

Query: 363 RDMQLARRIRGVR 325
           +DMQLARRI G R
Sbjct: 152 KDMQLARRIGGRR 164