BLASTX nr result

ID: Ephedra27_contig00019690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00019690
         (605 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC32141.1| probable ubiquitin-conjugating enzyme E2 [Picea m...    78   2e-12
gb|ABK25198.1| unknown [Picea sitchensis]                              77   5e-12
gb|ABR17368.1| unknown [Picea sitchensis]                              73   5e-11

>gb|AAC32141.1| probable ubiquitin-conjugating enzyme E2 [Picea mariana]
          Length = 242

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 42/84 (50%), Positives = 57/84 (67%), Gaps = 4/84 (4%)
 Frame = -3

Query: 603 YVEKHKEQKIAESLKNEL----GHCKNTSAGALEQSETSKQNGKEFGGRGPRKQKGLKSL 436
           Y EK+ EQ+ AE++ +EL    G  K ++  A EQS+  + N KE G +GP++ +  K+ 
Sbjct: 156 YAEKYSEQQKAENMNSELTSNKGDAKPSTTVAQEQSQAIRHNDKETGHKGPKRGRS-KNF 214

Query: 435 PMWFFVLLMAVFGSVMALPLLSLD 364
           P W  VLLMAVFGSVMALPLL+LD
Sbjct: 215 PTWLLVLLMAVFGSVMALPLLNLD 238


>gb|ABK25198.1| unknown [Picea sitchensis]
          Length = 242

 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 41/84 (48%), Positives = 57/84 (67%), Gaps = 4/84 (4%)
 Frame = -3

Query: 603 YVEKHKEQKIAESLKNEL----GHCKNTSAGALEQSETSKQNGKEFGGRGPRKQKGLKSL 436
           Y EK+ EQ+ AE++ +EL    G  K ++  A EQS+  + N K+ G +GP++ +  K+ 
Sbjct: 156 YAEKYSEQQKAENMNSELTSNKGDAKPSTTVAQEQSQAIRHNDKDTGHKGPKRGRS-KNF 214

Query: 435 PMWFFVLLMAVFGSVMALPLLSLD 364
           P W  VLLMAVFGSVMALPLL+LD
Sbjct: 215 PTWLLVLLMAVFGSVMALPLLNLD 238


>gb|ABR17368.1| unknown [Picea sitchensis]
          Length = 242

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 40/84 (47%), Positives = 56/84 (66%), Gaps = 4/84 (4%)
 Frame = -3

Query: 603 YVEKHKEQKIAESLKNEL----GHCKNTSAGALEQSETSKQNGKEFGGRGPRKQKGLKSL 436
           Y EK+ EQ+ AE++ +EL    G  K ++  A EQS+  + N K+   +GP++ +  K+ 
Sbjct: 156 YAEKYSEQQKAENMNSELTSNKGDAKPSTTVAQEQSQAIRHNDKDTVHKGPKRGRS-KNF 214

Query: 435 PMWFFVLLMAVFGSVMALPLLSLD 364
           P W  VLLMAVFGSVMALPLL+LD
Sbjct: 215 PTWLLVLLMAVFGSVMALPLLNLD 238


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