BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00019596
         (797 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004919205.1| PREDICTED: putative mediator of RNA polymera...    68   4e-09
emb|CCF72558.1| unnamed protein product [Babesia microti strain RI]    62   2e-07

>ref|XP_004919205.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 26-like [Xenopus (Silurana) tropicalis]
          Length = 505

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 50/222 (22%), Positives = 108/222 (48%), Gaps = 6/222 (2%)
 Frame = +3

Query: 15  ASRSSIVGRNADLDHYAATDSKALPSRGSHLGQNADLNKSQITDSHAFPSRSSNFDRKAN 194
           + R+S  GRN+D  +   +D +    R S +G+N+ + ++     ++   R+S+  R ++
Sbjct: 289 SGRNSSYGRNSDGRN---SDGRNSTGRNSSMGRNS-MGRNSRMGRNSSMGRNSSMGRNSS 344

Query: 195 LGHYAV-----TDTEAPPSRANDLGRNADLSRSQINDSQAFVGRSRNIVPNTNLGHYGLR 359
           +G  ++         +   R++++GRN+++ R+      + +GR+ N+  N+N+G     
Sbjct: 345 MGRNSMGRNSRMGRNSSMGRSSNMGRNSNMGRNSNMGRNSSMGRNSNMGRNSNMGRNSSM 404

Query: 360 EGTENLGSSGSLGKNPDLGGYGNRDKNAYLGQYSYEVRNGKEYPSLSGIHLSHHSASGLN 539
               ++G + ++G+N ++G   N  +N+ +G+ S   RN     S  G     +S+ G N
Sbjct: 405 GRNSSMGRNSNMGRNSNMGRNSNMGRNSSMGRNSSMGRNSMGRNSSMG----RNSSMGRN 460

Query: 540 GLGREDTSSLRARVESHGFGAVESLMSDHDCG-ESVYGAPSG 662
            +GR  +    +   +   G   S+  + + G  S+ GA  G
Sbjct: 461 SMGRNSSMGRNSMGRNSSMGRNSSMGRNSNMGRNSMEGAGGG 502


>emb|CCF72558.1| unnamed protein product [Babesia microti strain RI]
          Length = 648

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 38/139 (27%), Positives = 65/139 (46%)
 Frame = +3

Query: 33  VGRNADLDHYAATDSKALPSRGSHLGQNADLNKSQITDSHAFPSRSSNFDRKANLGHYAV 212
           +G++A+L   A  D     S   ++G++A+L K    D     S   N  + ANLG  A 
Sbjct: 474 IGKDANLGKDAGIDKDKTLSEDKNIGKDANLGKDAGIDKDKTLSEDKNIGKDANLGKDAG 533

Query: 213 TDTEAPPSRANDLGRNADLSRSQINDSQAFVGRSRNIVPNTNLGHYGLREGTENLGSSGS 392
            D +   S   ++G++A+L +    D    +   +NI  + NLG     +  + L    +
Sbjct: 534 IDKDKTLSEDKNIGKDANLGKDAGIDKDKTLSEDKNIGKDANLGKDAGIDKDKTLSEDKN 593

Query: 393 LGKNPDLGGYGNRDKNAYL 449
           +GK+ +LG Y N   + YL
Sbjct: 594 IGKDANLGNYTNLPNSIYL 612