BLASTX nr result
ID: Ephedra27_contig00019296
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00019296
(682 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ESW10786.1| hypothetical protein PHAVU_009G237900g [Phaseolus... 61 3e-07
gb|AAF71823.1|AF153276_1 pumilio domain-containing protein PPD1 ... 59 1e-06
ref|XP_002311896.2| hypothetical protein POPTR_0008s00490g [Popu... 58 2e-06
ref|XP_006468093.1| PREDICTED: pumilio homolog 5-like isoform X4... 57 7e-06
ref|XP_006468090.1| PREDICTED: pumilio homolog 5-like isoform X1... 57 7e-06
ref|XP_006436386.1| hypothetical protein CICLE_v100306131mg [Cit... 57 7e-06
ref|XP_006436385.1| hypothetical protein CICLE_v100306131mg [Cit... 57 7e-06
>gb|ESW10786.1| hypothetical protein PHAVU_009G237900g [Phaseolus vulgaris]
gi|561011880|gb|ESW10787.1| hypothetical protein
PHAVU_009G237900g [Phaseolus vulgaris]
Length = 975
Score = 61.2 bits (147), Expect = 3e-07
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Frame = +1
Query: 379 MATENPVRLLGSGGGETQTWSGGLQHSA--SSSADMAEEQDRRNMIRGEKFHSSRQ-MFP 549
MATE+P+R+ +GG W + +A S+S +MA E D +++G +FHS R+ + P
Sbjct: 1 MATESPIRISEAGG----KWPSHKEATAFGSTSHNMATE-DLGILLKGHRFHSGRKDVTP 55
Query: 550 NRSGSAPPTFEGSLAALGGLFPNYVSGPNSTW 645
NRSGSAPP+ EGS A+ L P + N+++
Sbjct: 56 NRSGSAPPSMEGSFLAIENLLPQQIITQNASF 87
>gb|AAF71823.1|AF153276_1 pumilio domain-containing protein PPD1 [Populus tremula x Populus
tremuloides]
Length = 966
Score = 58.9 bits (141), Expect = 1e-06
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +1
Query: 379 MATENPVRLLGSGGGETQTWSGGLQHSASSSADMAEEQDRRNMIRGEKFHSSR-QMFPNR 555
MATE+P+R++ SGG + S S MA E+ +++ + FH + P+R
Sbjct: 1 MATESPMRMVESGGARKWSSSKDSAVLGSPLRSMAAEE-LGLLLKRQGFHGDETETIPSR 59
Query: 556 SGSAPPTFEGSLAALGGLFPNYVSGPNSTWES 651
SGSAPP+ EGS AA+G L + SG +S+ ES
Sbjct: 60 SGSAPPSMEGSFAAIGNLLAQHNSGMSSSLES 91
>ref|XP_002311896.2| hypothetical protein POPTR_0008s00490g [Populus trichocarpa]
gi|550332073|gb|EEE89263.2| hypothetical protein
POPTR_0008s00490g [Populus trichocarpa]
Length = 992
Score = 58.2 bits (139), Expect = 2e-06
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Frame = +1
Query: 379 MATENPVRLLGSGGGETQTWSGGLQHSASSSADMAEEQDRRNMIRGEKFHSSR-QMFPNR 555
MATE+P+R++ SGG + S S MA E+ +++ + FH P+R
Sbjct: 1 MATESPMRMVESGGARKWSSSKDSAVLGSPLRSMAAEE-LGLLLKRQGFHGDETDTIPSR 59
Query: 556 SGSAPPTFEGSLAALGGLFPNYVSGPNSTWES 651
SGSAPP+ EGS AA+G L + SG +S+ ES
Sbjct: 60 SGSAPPSMEGSFAAIGNLLAQHNSGMSSSLES 91
>ref|XP_006468093.1| PREDICTED: pumilio homolog 5-like isoform X4 [Citrus sinensis]
Length = 1014
Score = 56.6 bits (135), Expect = 7e-06
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Frame = +1
Query: 379 MATENPVRLLGSGGGETQTWSGGLQHSASSSADMAEEQDRRN------MIRGEKFHSSR- 537
MATE+P+ ++ GG + W HS+ SA + +++G++F +
Sbjct: 1 MATESPMIMVEGGGA--RNW-----HSSKDSAVFGPRFENMGAEELGLLLKGQRFRGDQT 53
Query: 538 QMFPNRSGSAPPTFEGSLAALGGLFPNYVSGPNSTWESQTEK-GNAE 675
M P+RSGSAPP+ EGS+AA+G L + S N++ ES + GN E
Sbjct: 54 DMIPSRSGSAPPSMEGSIAAIGNLLAKHNSSTNASLESLSNALGNYE 100
>ref|XP_006468090.1| PREDICTED: pumilio homolog 5-like isoform X1 [Citrus sinensis]
gi|568827490|ref|XP_006468091.1| PREDICTED: pumilio
homolog 5-like isoform X2 [Citrus sinensis]
gi|568827492|ref|XP_006468092.1| PREDICTED: pumilio
homolog 5-like isoform X3 [Citrus sinensis]
Length = 1019
Score = 56.6 bits (135), Expect = 7e-06
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Frame = +1
Query: 379 MATENPVRLLGSGGGETQTWSGGLQHSASSSADMAEEQDRRN------MIRGEKFHSSR- 537
MATE+P+ ++ GG + W HS+ SA + +++G++F +
Sbjct: 1 MATESPMIMVEGGGA--RNW-----HSSKDSAVFGPRFENMGAEELGLLLKGQRFRGDQT 53
Query: 538 QMFPNRSGSAPPTFEGSLAALGGLFPNYVSGPNSTWESQTEK-GNAE 675
M P+RSGSAPP+ EGS+AA+G L + S N++ ES + GN E
Sbjct: 54 DMIPSRSGSAPPSMEGSIAAIGNLLAKHNSSTNASLESLSNALGNYE 100
>ref|XP_006436386.1| hypothetical protein CICLE_v100306131mg [Citrus clementina]
gi|557538582|gb|ESR49626.1| hypothetical protein
CICLE_v100306131mg [Citrus clementina]
Length = 1014
Score = 56.6 bits (135), Expect = 7e-06
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Frame = +1
Query: 379 MATENPVRLLGSGGGETQTWSGGLQHSASSSADMAEEQDRRN------MIRGEKFHSSR- 537
MATE+P+ ++ GG + W HS+ SA + +++G++F +
Sbjct: 1 MATESPMIMVEGGGA--RNW-----HSSKDSAVFGPRFENMGAEELGLLLKGQRFRGDQT 53
Query: 538 QMFPNRSGSAPPTFEGSLAALGGLFPNYVSGPNSTWESQTEK-GNAE 675
M P+RSGSAPP+ EGS+AA+G L + S N++ ES + GN E
Sbjct: 54 DMIPSRSGSAPPSMEGSIAAIGNLLAKHNSSTNASLESLSNALGNYE 100
>ref|XP_006436385.1| hypothetical protein CICLE_v100306131mg [Citrus clementina]
gi|567887730|ref|XP_006436387.1| hypothetical protein
CICLE_v100306131mg [Citrus clementina]
gi|557538581|gb|ESR49625.1| hypothetical protein
CICLE_v100306131mg [Citrus clementina]
gi|557538583|gb|ESR49627.1| hypothetical protein
CICLE_v100306131mg [Citrus clementina]
Length = 1019
Score = 56.6 bits (135), Expect = 7e-06
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Frame = +1
Query: 379 MATENPVRLLGSGGGETQTWSGGLQHSASSSADMAEEQDRRN------MIRGEKFHSSR- 537
MATE+P+ ++ GG + W HS+ SA + +++G++F +
Sbjct: 1 MATESPMIMVEGGGA--RNW-----HSSKDSAVFGPRFENMGAEELGLLLKGQRFRGDQT 53
Query: 538 QMFPNRSGSAPPTFEGSLAALGGLFPNYVSGPNSTWESQTEK-GNAE 675
M P+RSGSAPP+ EGS+AA+G L + S N++ ES + GN E
Sbjct: 54 DMIPSRSGSAPPSMEGSIAAIGNLLAKHNSSTNASLESLSNALGNYE 100