BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00019238
         (449 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [A...   203   2e-50
ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chl...   201   6e-50
ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chl...   201   6e-50
gb|EMS58535.1| RNA pseudourine synthase 2, chloroplastic [Tritic...   200   1e-49
ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutr...   200   2e-49
ref|XP_004966473.1| PREDICTED: RNA pseudouridine synthase 2, chl...   200   2e-49
ref|XP_002439034.1| hypothetical protein SORBIDRAFT_10g030300 [S...   200   2e-49
ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chlor...   199   2e-49
ref|XP_003563280.1| PREDICTED: RNA pseudourine synthase 2, chlor...   199   3e-49
ref|NP_001058594.1| Os06g0717400 [Oryza sativa Japonica Group] g...   199   4e-49
gb|EEC81320.1| hypothetical protein OsI_24484 [Oryza sativa Indi...   199   4e-49
gb|EOY15125.1| Pseudouridine synthase family protein isoform 1 [...   198   7e-49
ref|XP_006656497.1| PREDICTED: RNA pseudouridine synthase 2, chl...   197   9e-49
gb|ACG41877.1| RNA binding protein [Zea mays]                         197   1e-48
ref|NP_001140404.1| RNA binding protein [Zea mays] gi|194699356|...   197   1e-48
ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor...   197   2e-48
emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]   197   2e-48
ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor...   196   3e-48
ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   195   6e-48
ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [...   194   1e-47

>ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [Amborella trichopoda]
           gi|548833830|gb|ERM96267.1| hypothetical protein
           AMTR_s00001p00157430 [Amborella trichopoda]
          Length = 452

 Score =  203 bits (517), Expect = 2e-50
 Identities = 97/147 (65%), Positives = 121/147 (82%)
 Frame = -1

Query: 449 SAVRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIE 270
           S++RPGIVHR+DKGTSGLLV+AKNE++HA L+EQF+ HT+ R+Y+SLTCGVP+  +G IE
Sbjct: 226 SSIRPGIVHRLDKGTSGLLVVAKNEHSHAHLSEQFKLHTIHRQYISLTCGVPSPSNGCIE 285

Query: 269 MSIARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRV 90
           + IARD NNR+RM AV   N   +AR A SRY V + L  GG  +VEWRL+TGRTHQIRV
Sbjct: 286 IPIARDMNNRIRMAAVSGQNNTRKARLATSRYHVMEVLAGGGSALVEWRLQTGRTHQIRV 345

Query: 89  HAQHIGFPLLGDEIYGGTKGLALSRLK 9
           HA++IG PLLGDE+YGGTK +ALSRL+
Sbjct: 346 HAKYIGNPLLGDEVYGGTKSMALSRLR 372


>ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Citrus
           sinensis]
          Length = 421

 Score =  201 bits (512), Expect = 6e-50
 Identities = 95/147 (64%), Positives = 121/147 (82%)
 Frame = -1

Query: 449 SAVRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIE 270
           +++RPGIVHR+DKGTSGLLV+AK+E++HA L+EQF+ HT+ R Y+SLT GVP++  GRIE
Sbjct: 208 ASIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRIE 267

Query: 269 MSIARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRV 90
           + I+RDPNNR+RM A+P SN   QAR AASRY V + L  GG  +VEWRLETGRTHQIR 
Sbjct: 268 VPISRDPNNRIRMAAIPGSNKHGQARHAASRYKVIEILAGGGSALVEWRLETGRTHQIRA 327

Query: 89  HAQHIGFPLLGDEIYGGTKGLALSRLK 9
           HA+++G PLLGDE+YGGTK +A S L+
Sbjct: 328 HAKYMGIPLLGDEVYGGTKNMAKSLLQ 354


>ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
           [Solanum tuberosum]
          Length = 431

 Score =  201 bits (512), Expect = 6e-50
 Identities = 95/149 (63%), Positives = 121/149 (81%)
 Frame = -1

Query: 449 SAVRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIE 270
           S+VRPGIVHR+DKGTSGLLV+AKNEN+ A LAEQF+KHT+ R YVS+TCGVPA   GR++
Sbjct: 220 SSVRPGIVHRLDKGTSGLLVVAKNENSLASLAEQFKKHTIKRVYVSITCGVPASVAGRVD 279

Query: 269 MSIARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRV 90
           + I RD NNR+RM A+P +    ++R A SRY V ++L +GG  +VEWRLETGRTHQIR 
Sbjct: 280 IPIGRDSNNRIRMAAIPGTPKSGKSRHAVSRYKVIEKLARGGSALVEWRLETGRTHQIRA 339

Query: 89  HAQHIGFPLLGDEIYGGTKGLALSRLKCK 3
           HA+++G PL+GDE+YGGTK +ALS L+ K
Sbjct: 340 HAKYLGIPLMGDEVYGGTKNMALSLLQPK 368


>gb|EMS58535.1| RNA pseudourine synthase 2, chloroplastic [Triticum urartu]
          Length = 485

 Score =  200 bits (509), Expect = 1e-49
 Identities = 97/145 (66%), Positives = 117/145 (80%)
 Frame = -1

Query: 443 VRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMS 264
           VRPGIVHR+DKGTSGLLV+AK+E++HA LAEQF+ HT+ R Y+SLTCGVP+    RIE+ 
Sbjct: 183 VRPGIVHRLDKGTSGLLVVAKDEHSHAQLAEQFKLHTISRVYISLTCGVPSPNSARIEVP 242

Query: 263 IARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRVHA 84
           I+RDPNNR+RM A P S  RY A+ AASRY V +  C GG  +VEWRLETGRTHQIR HA
Sbjct: 243 ISRDPNNRIRMVAAPGSGHRY-AKHAASRYKVREVFCAGGSALVEWRLETGRTHQIRAHA 301

Query: 83  QHIGFPLLGDEIYGGTKGLALSRLK 9
           +++G PLLGDE YGGTK +ALS L+
Sbjct: 302 KYLGNPLLGDETYGGTKSMALSLLR 326


>ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutrema salsugineum]
           gi|557086678|gb|ESQ27530.1| hypothetical protein
           EUTSA_v10018588mg [Eutrema salsugineum]
          Length = 432

 Score =  200 bits (508), Expect = 2e-49
 Identities = 95/147 (64%), Positives = 121/147 (82%)
 Frame = -1

Query: 449 SAVRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIE 270
           ++VRPGIVHR+DKGTSGLLV+AK+E++HA LAEQF+ HT+ R Y+SLT GVP+   GR++
Sbjct: 221 ASVRPGIVHRLDKGTSGLLVVAKDEHSHAHLAEQFKLHTIERVYISLTSGVPSPSQGRVD 280

Query: 269 MSIARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRV 90
           + I RDPNNR+RM A+P S +R +AR AASRY V + L  GG  +VEWRLETGRTHQIR 
Sbjct: 281 IPIGRDPNNRIRMAAIPGSLSRGKARHAASRYKVIETLAGGGSALVEWRLETGRTHQIRA 340

Query: 89  HAQHIGFPLLGDEIYGGTKGLALSRLK 9
           HA+++G PLLGDE+YGGTK +ALS L+
Sbjct: 341 HAKYMGVPLLGDEVYGGTKSVALSLLQ 367


>ref|XP_004966473.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
           [Setaria italica]
          Length = 437

 Score =  200 bits (508), Expect = 2e-49
 Identities = 99/145 (68%), Positives = 116/145 (80%)
 Frame = -1

Query: 443 VRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMS 264
           VRPGIVHR+DKGTSGLLV+AK+E++HA LAEQF+ HT+ R Y+SLTCGVP    GRIE S
Sbjct: 222 VRPGIVHRLDKGTSGLLVVAKDEHSHAQLAEQFKLHTIRRVYISLTCGVPHPNSGRIEAS 281

Query: 263 IARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRVHA 84
           IARDPNNR+RM A+  S  RY AR AASRY V +    GG  +VEWRLETGRTHQIR HA
Sbjct: 282 IARDPNNRIRMIAIAGSGQRY-ARHAASRYKVREVFAGGGSALVEWRLETGRTHQIRAHA 340

Query: 83  QHIGFPLLGDEIYGGTKGLALSRLK 9
           +++G PLLGDE YGGTK +ALS L+
Sbjct: 341 KYLGIPLLGDETYGGTKSMALSLLR 365


>ref|XP_002439034.1| hypothetical protein SORBIDRAFT_10g030300 [Sorghum bicolor]
           gi|241917257|gb|EER90401.1| hypothetical protein
           SORBIDRAFT_10g030300 [Sorghum bicolor]
          Length = 441

 Score =  200 bits (508), Expect = 2e-49
 Identities = 100/145 (68%), Positives = 116/145 (80%)
 Frame = -1

Query: 443 VRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMS 264
           VRPGIVHR+DKGTSGLLV+AK+E++HA LAEQF+ HT+ R Y+SLTCGVP    GRIE S
Sbjct: 227 VRPGIVHRLDKGTSGLLVVAKDEHSHAQLAEQFKLHTIRRVYISLTCGVPNPNSGRIEAS 286

Query: 263 IARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRVHA 84
           IARDPNNR+RM A+  S  RY AR AASRY V +    GG  +VEWRLETGRTHQIR HA
Sbjct: 287 IARDPNNRIRMIAIAGSGHRY-ARHAASRYKVREVFVGGGSALVEWRLETGRTHQIRAHA 345

Query: 83  QHIGFPLLGDEIYGGTKGLALSRLK 9
           ++IG PLLGDE YGGTK +ALS L+
Sbjct: 346 KYIGIPLLGDETYGGTKSMALSLLR 370


>ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Solanum
           lycopersicum]
          Length = 436

 Score =  199 bits (507), Expect = 2e-49
 Identities = 95/149 (63%), Positives = 120/149 (80%)
 Frame = -1

Query: 449 SAVRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIE 270
           S+VRPGIVHR+DKGTSGLLV+AKNE++ A LAEQF+KHT+ R YVS+TCGVPA   GR++
Sbjct: 220 SSVRPGIVHRLDKGTSGLLVVAKNEHSLADLAEQFKKHTIKRVYVSITCGVPASVAGRVD 279

Query: 269 MSIARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRV 90
           + I RD NNR+RM A+P +    ++R A SRY V ++L  GG  +VEWRLETGRTHQIR 
Sbjct: 280 IPIGRDSNNRIRMAAIPGTPKSGKSRHAVSRYKVIEKLAGGGSALVEWRLETGRTHQIRA 339

Query: 89  HAQHIGFPLLGDEIYGGTKGLALSRLKCK 3
           HA+H+G PL+GDE+YGGTK +ALS L+ K
Sbjct: 340 HAKHLGIPLMGDEVYGGTKNMALSLLQPK 368


>ref|XP_003563280.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like
           [Brachypodium distachyon]
          Length = 439

 Score =  199 bits (506), Expect = 3e-49
 Identities = 96/145 (66%), Positives = 117/145 (80%)
 Frame = -1

Query: 443 VRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMS 264
           VRPGIVHR+DKGTSGLLV+AK+E++HA LAEQF+ HT+ R Y+SLTCGVP     RIE+ 
Sbjct: 221 VRPGIVHRLDKGTSGLLVVAKDEHSHAQLAEQFKLHTIRRIYISLTCGVPNPNSARIEVP 280

Query: 263 IARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRVHA 84
           I+RDPNNR+RM A P S  RY AR AASRY V +  C GG  +VEW+LETGRTHQIR HA
Sbjct: 281 ISRDPNNRIRMIAAPGSGHRY-ARHAASRYKVREVFCSGGSALVEWKLETGRTHQIRAHA 339

Query: 83  QHIGFPLLGDEIYGGTKGLALSRLK 9
           +++G+PLLGDE YGG+K +ALS L+
Sbjct: 340 KYLGYPLLGDETYGGSKSMALSLLR 364


>ref|NP_001058594.1| Os06g0717400 [Oryza sativa Japonica Group]
           gi|75252835|sp|Q5Z8P2.1|PUS2_ORYSJ RecName: Full=RNA
           pseudouridine synthase 2, chloroplastic; AltName:
           Full=RNA pseudouridylate synthase 2; AltName:
           Full=RNA-uridine isomerase 2; Flags: Precursor
           gi|53791796|dbj|BAD53590.1| ribosomal large subunit
           pseudouridine synthase-like [Oryza sativa Japonica
           Group] gi|54291043|dbj|BAD61720.1| ribosomal large
           subunit pseudouridine synthase-like [Oryza sativa
           Japonica Group] gi|113596634|dbj|BAF20508.1|
           Os06g0717400 [Oryza sativa Japonica Group]
           gi|215706335|dbj|BAG93191.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222636236|gb|EEE66368.1| hypothetical protein
           OsJ_22675 [Oryza sativa Japonica Group]
          Length = 445

 Score =  199 bits (505), Expect = 4e-49
 Identities = 98/145 (67%), Positives = 115/145 (79%)
 Frame = -1

Query: 443 VRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMS 264
           VRPGIVHR+DKGTSGLLV+AK+E++HA LAEQF+ HT+ R Y+SLTCG P    GRIE+ 
Sbjct: 226 VRPGIVHRLDKGTSGLLVVAKDEHSHAQLAEQFKLHTIRRVYISLTCGAPNPNSGRIEVP 285

Query: 263 IARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRVHA 84
           IARDPNNR+RM A P S  RY AR AASRY V +    GG  +VEWRLETGRTHQIR HA
Sbjct: 286 IARDPNNRIRMIATPGSGHRY-ARHAASRYKVREVFAGGGSALVEWRLETGRTHQIRAHA 344

Query: 83  QHIGFPLLGDEIYGGTKGLALSRLK 9
           +++G PLLGDE YGGTK +ALS L+
Sbjct: 345 KYLGIPLLGDETYGGTKSMALSLLR 369


>gb|EEC81320.1| hypothetical protein OsI_24484 [Oryza sativa Indica Group]
          Length = 445

 Score =  199 bits (505), Expect = 4e-49
 Identities = 98/145 (67%), Positives = 115/145 (79%)
 Frame = -1

Query: 443 VRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMS 264
           VRPGIVHR+DKGTSGLLV+AK+E++HA LAEQF+ HT+ R Y+SLTCG P    GRIE+ 
Sbjct: 226 VRPGIVHRLDKGTSGLLVVAKDEHSHAQLAEQFKLHTIRRVYISLTCGAPNPNSGRIEVP 285

Query: 263 IARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRVHA 84
           IARDPNNR+RM A P S  RY AR AASRY V +    GG  +VEWRLETGRTHQIR HA
Sbjct: 286 IARDPNNRIRMIATPGSGHRY-ARHAASRYKVREVFAGGGSALVEWRLETGRTHQIRAHA 344

Query: 83  QHIGFPLLGDEIYGGTKGLALSRLK 9
           +++G PLLGDE YGGTK +ALS L+
Sbjct: 345 KYLGIPLLGDETYGGTKSMALSLLR 369


>gb|EOY15125.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
          Length = 433

 Score =  198 bits (503), Expect = 7e-49
 Identities = 93/147 (63%), Positives = 121/147 (82%)
 Frame = -1

Query: 449 SAVRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIE 270
           ++VRPGIVHR+DKGTSGLLV+AK+E++H+ L+EQF++HT+ R Y+SLTCGVP+   GR++
Sbjct: 219 ASVRPGIVHRLDKGTSGLLVVAKDEHSHSHLSEQFKQHTIQRVYISLTCGVPSPSAGRVD 278

Query: 269 MSIARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRV 90
           +SI RD NNRVRM AVP  N   +AR AASRY V + L  GG  +++WRLETGRTHQIR 
Sbjct: 279 ISIGRDSNNRVRMIAVPGLNHHGRARHAASRYKVIEVLAGGGSALIQWRLETGRTHQIRA 338

Query: 89  HAQHIGFPLLGDEIYGGTKGLALSRLK 9
           HA+++G PLLGDE+YGGTK +ALS L+
Sbjct: 339 HAKYMGIPLLGDEVYGGTKSMALSLLR 365


>ref|XP_006656497.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Oryza
           brachyantha]
          Length = 442

 Score =  197 bits (502), Expect = 9e-49
 Identities = 97/145 (66%), Positives = 115/145 (79%)
 Frame = -1

Query: 443 VRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMS 264
           VRPGIVHR+DKGTSGLLV+AK+E++HA LAEQF+ HT+ R Y+SLTCG P    GRIE+ 
Sbjct: 224 VRPGIVHRLDKGTSGLLVVAKDEHSHAQLAEQFKLHTIRRVYISLTCGAPNPNSGRIEVP 283

Query: 263 IARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRVHA 84
           IARDPNNR+RM A P S  RY AR AASRY V +    GG  +VEW+LETGRTHQIR HA
Sbjct: 284 IARDPNNRIRMIATPGSGHRY-ARHAASRYKVREVFAGGGSALVEWKLETGRTHQIRAHA 342

Query: 83  QHIGFPLLGDEIYGGTKGLALSRLK 9
           +++G PLLGDE YGGTK +ALS L+
Sbjct: 343 KYLGIPLLGDETYGGTKSMALSLLR 367


>gb|ACG41877.1| RNA binding protein [Zea mays]
          Length = 439

 Score =  197 bits (501), Expect = 1e-48
 Identities = 98/145 (67%), Positives = 115/145 (79%)
 Frame = -1

Query: 443 VRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMS 264
           VRPGIVHR+DKGTSGLLV+AK+E++HA LAEQF+ HT+ R Y+SLTCG P    GRIE S
Sbjct: 224 VRPGIVHRLDKGTSGLLVVAKDEHSHARLAEQFKLHTIRRVYISLTCGAPNPNSGRIEAS 283

Query: 263 IARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRVHA 84
           IARDPNNR+RM A+  S  RY AR AASRY V +    GG  +VEWRLETGRTHQIR HA
Sbjct: 284 IARDPNNRIRMTAIAGSGHRY-ARNAASRYKVREVFAGGGSALVEWRLETGRTHQIRAHA 342

Query: 83  QHIGFPLLGDEIYGGTKGLALSRLK 9
           ++IG PLLGDE YGGT+ +ALS L+
Sbjct: 343 KYIGIPLLGDETYGGTQSMALSLLR 367


>ref|NP_001140404.1| RNA binding protein [Zea mays] gi|194699356|gb|ACF83762.1| unknown
           [Zea mays] gi|413943105|gb|AFW75754.1| RNA binding
           protein [Zea mays]
          Length = 419

 Score =  197 bits (501), Expect = 1e-48
 Identities = 98/145 (67%), Positives = 115/145 (79%)
 Frame = -1

Query: 443 VRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMS 264
           VRPGIVHR+DKGTSGLLV+AK+E++HA LAEQF+ HT+ R Y+SLTCG P    GRIE S
Sbjct: 224 VRPGIVHRLDKGTSGLLVVAKDEHSHARLAEQFKLHTIRRVYISLTCGAPNPNSGRIEAS 283

Query: 263 IARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRVHA 84
           IARDPNNR+RM A+  S  RY AR AASRY V +    GG  +VEWRLETGRTHQIR HA
Sbjct: 284 IARDPNNRIRMTAIAGSGHRY-ARNAASRYKVREVFAGGGSALVEWRLETGRTHQIRAHA 342

Query: 83  QHIGFPLLGDEIYGGTKGLALSRLK 9
           ++IG PLLGDE YGGT+ +ALS L+
Sbjct: 343 KYIGIPLLGDETYGGTQSMALSLLR 367


>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
           vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
           product [Vitis vinifera]
          Length = 433

 Score =  197 bits (500), Expect = 2e-48
 Identities = 92/145 (63%), Positives = 116/145 (80%)
 Frame = -1

Query: 443 VRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMS 264
           +RPGIVHR+DKGTSGLLV+AK+E++HA L+EQF+ H++ R Y+SLT GVP    GR+E+ 
Sbjct: 220 IRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIP 279

Query: 263 IARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRVHA 84
           + RDPNNR+RM AVP  +   QAR AASRY V + L  GG  +VEWRLETGRTHQIR HA
Sbjct: 280 VGRDPNNRIRMTAVPGPSNSGQARHAASRYKVIEILAAGGSALVEWRLETGRTHQIRAHA 339

Query: 83  QHIGFPLLGDEIYGGTKGLALSRLK 9
           +++G PLLGDE+YGGTK +ALS L+
Sbjct: 340 KYLGIPLLGDEVYGGTKNMALSLLR 364


>emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]
          Length = 611

 Score =  197 bits (500), Expect = 2e-48
 Identities = 92/145 (63%), Positives = 116/145 (80%)
 Frame = -1

Query: 443 VRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMS 264
           +RPGIVHR+DKGTSGLLV+AK+E++HA L+EQF+ H++ R Y+SLT GVP    GR+E+ 
Sbjct: 366 IRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIP 425

Query: 263 IARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRVHA 84
           + RDPNNR+RM AVP  +   QAR AASRY V + L  GG  +VEWRLETGRTHQIR HA
Sbjct: 426 VGRDPNNRIRMTAVPGPSNSGQARHAASRYKVIEILAAGGSALVEWRLETGRTHQIRAHA 485

Query: 83  QHIGFPLLGDEIYGGTKGLALSRLK 9
           +++G PLLGDE+YGGTK +ALS L+
Sbjct: 486 KYLGIPLLGDEVYGGTKNMALSLLR 510


>ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis
           sativus]
          Length = 453

 Score =  196 bits (498), Expect = 3e-48
 Identities = 90/147 (61%), Positives = 118/147 (80%)
 Frame = -1

Query: 443 VRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMS 264
           +RPGIVHR+DKGTSGLLV+AK+E++HA L+ QF++H++ R Y+SLTCGVP    GRIEM 
Sbjct: 219 IRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMP 278

Query: 263 IARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRVHA 84
           I RDPNNR+RM A+  +     A++AASRY V + L +GG  +VEWRLETGRTHQIR HA
Sbjct: 279 ICRDPNNRIRMTAIDGTKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHA 338

Query: 83  QHIGFPLLGDEIYGGTKGLALSRLKCK 3
           +++G PLLGDE+YGGTK +A+S L+ +
Sbjct: 339 KYMGIPLLGDEVYGGTKSMAMSLLRTR 365


>ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 452

 Score =  195 bits (495), Expect = 6e-48
 Identities = 91/147 (61%), Positives = 120/147 (81%)
 Frame = -1

Query: 443 VRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMS 264
           +RPGIVHR+DKGTSGLLV+AK+E++HA L+ QF++H++ R Y+SLTCGVP    GRIEM 
Sbjct: 219 IRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMP 278

Query: 263 IARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRVHA 84
           I RDPNNR+RM A+  +N  + A++AASRY V + L +GG  +VEWRLETGRTHQIR HA
Sbjct: 279 ICRDPNNRIRMTAIDGTNNPH-AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHA 337

Query: 83  QHIGFPLLGDEIYGGTKGLALSRLKCK 3
           +++G PLLGDE+YGGTK +A+S L+ +
Sbjct: 338 KYMGIPLLGDEVYGGTKSMAMSLLRTR 364


>ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223541437|gb|EEF42987.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 399

 Score =  194 bits (492), Expect = 1e-47
 Identities = 92/147 (62%), Positives = 119/147 (80%)
 Frame = -1

Query: 449 SAVRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIE 270
           S++RPGIVHR+DKGTSGLLV+AK+E+AHA L+EQF++HT+ R Y+SLT GVP+   GRI+
Sbjct: 210 SSIRPGIVHRLDKGTSGLLVVAKDEHAHAHLSEQFKQHTIQRVYISLTSGVPSALTGRID 269

Query: 269 MSIARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRV 90
           + I RD NNR+RM A+P    + +AR AASR+ V + L  GG  +VEWRLETGRTHQIR 
Sbjct: 270 IPIGRDVNNRIRMTAIPGPIKQGRARHAASRFKVVETLAGGGSALVEWRLETGRTHQIRA 329

Query: 89  HAQHIGFPLLGDEIYGGTKGLALSRLK 9
           HA++IG PLLGDE+YGGT+ +ALS L+
Sbjct: 330 HAKYIGIPLLGDEVYGGTRSMALSLLR 356