BLASTX nr result

ID: Ephedra27_contig00019099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00019099
         (403 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17267.1| unknown [Picea sitchensis]                              64   2e-08
ref|XP_006858525.1| hypothetical protein AMTR_s00071p00152290 [A...    56   6e-06

>gb|ABR17267.1| unknown [Picea sitchensis]
          Length = 99

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 31/65 (47%), Positives = 40/65 (61%)
 Frame = +3

Query: 3   SSLAGLTSALVFFRTPATRXXXXXXXXXXXXXSAYTDCSRIFDGPFPKWPVPAYTAPTST 182
           SS+AG  SAL+ FR+P TR             SAYTDCSRIFDG  PKWP+P   +   +
Sbjct: 31  SSVAGAGSALLLFRSPTTRWAAVAFGAGVGLGSAYTDCSRIFDGSLPKWPLPPNVSSPLS 90

Query: 183 TTNSE 197
           +++SE
Sbjct: 91  SSSSE 95


>ref|XP_006858525.1| hypothetical protein AMTR_s00071p00152290 [Amborella trichopoda]
           gi|548862634|gb|ERN19992.1| hypothetical protein
           AMTR_s00071p00152290 [Amborella trichopoda]
          Length = 110

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/67 (40%), Positives = 35/67 (52%)
 Frame = +3

Query: 3   SSLAGLTSALVFFRTPATRXXXXXXXXXXXXXSAYTDCSRIFDGPFPKWPVPAYTAPTST 182
           SS AG  + L+FFR+P TR             +AYTDCS IFDG   KWP+P  ++    
Sbjct: 31  SSFAGAFAGLLFFRSPVTRWASVAFGAGVGIGTAYTDCSHIFDGSPTKWPIPPKSSDIPP 90

Query: 183 TTNSESQ 203
            T  + Q
Sbjct: 91  PTTQKQQ 97


Top