BLASTX nr result

ID: Ephedra27_contig00018980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00018980
         (1467 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001775171.1| predicted protein [Physcomitrella patens] gi...    66   3e-08
ref|XP_001782576.1| predicted protein [Physcomitrella patens] gi...    64   2e-07

>ref|XP_001775171.1| predicted protein [Physcomitrella patens]
           gi|162673510|gb|EDQ60032.1| predicted protein
           [Physcomitrella patens]
          Length = 1110

 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 35/90 (38%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
 Frame = -2

Query: 266 NGENVFTDMLVYVCRSLRELRQRCVVCKKRIP-TLSPLFFCDAEFCLYQFEEERMGVSLL 90
           N +N F  + + +C  LR L  RC++C K++  +++ +  CD + CLY+FEE  +GVS+L
Sbjct: 365 NNKNPFIGLALAICHQLRLLPGRCLICWKKLSCSVTRMRTCDEDLCLYRFEELGLGVSVL 424

Query: 89  QELQNT-KLARFLIATALEASISARDVFEP 3
            E++++ +L    ++ A  A  SARDVFEP
Sbjct: 425 DEVKSSPELVEVELSLAHTALESARDVFEP 454


>ref|XP_001782576.1| predicted protein [Physcomitrella patens]
           gi|162665896|gb|EDQ52565.1| predicted protein
           [Physcomitrella patens]
          Length = 939

 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 69/286 (24%), Positives = 124/286 (43%), Gaps = 3/286 (1%)
 Frame = -2

Query: 851 VYRLALEAKKKCDYALLDTKTDMEDNLLAWCSVSVDAHRHAVSLGIDVRGILFDSRKFST 672
           +Y  + +A+K+C+     T  D++ N L W SV        V L  D+ GI+ D  + + 
Sbjct: 199 LYAFSEDARKQCEACKAQTLGDLQ-NPLMWLSVVSKPKVLVVELQFDLVGIIDD--RVAA 255

Query: 671 ALGFPFDGSELIIEINLADGEWSTLEIREDFMDSAEIRCYVKEPVDVLKRKRDEMIE-ND 495
            LG   +   + + +  +   WS     E  +   E  C      ++   +  ++IE  D
Sbjct: 256 GLGLSIN-EHVSLSLEFSKNTWS-----ETTLQWTEFECQ-----NITVSQDSKLIEARD 304

Query: 494 LHFVEEKMWIAKKKNKKSNEDELAVLMKEYVKNRFELQWQLKIMGFIRRTLKTQNFGARV 315
               E   ++            L VL  +  +  F     L   G    + +T N+    
Sbjct: 305 TERDEIDRYLESSFGAGHRSYGLDVLFPDLTRKFFAA---LNHHG----SAQTGNYQYME 357

Query: 314 VVPEMIKEFKKGKAWWNGENVFTDMLVYVCRSLRELRQRCVVCKKRIP-TLSPLFFCDAE 138
            + E +          N +N F  + + +   L+ L Q C++C +  P +++ +  CD++
Sbjct: 358 GIDENL----------NNKNPFLGLALAISHQLKRLPQCCIICWREHPFSVTRMRTCDSD 407

Query: 137 FCLYQFEEERMGVSLLQELQNT-KLARFLIATALEASISARDVFEP 3
            CL+ FEE  +GVS+L E++++ +L    +A A  A  S RDVFEP
Sbjct: 408 LCLHLFEELGLGVSVLGEVKSSPELVEMEMAFAAAALRSKRDVFEP 453


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