BLASTX nr result

ID: Ephedra27_contig00018970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00018970
         (785 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006842336.1| hypothetical protein AMTR_s00079p00166070 [A...    60   1e-06

>ref|XP_006842336.1| hypothetical protein AMTR_s00079p00166070 [Amborella trichopoda]
           gi|548844402|gb|ERN04011.1| hypothetical protein
           AMTR_s00079p00166070 [Amborella trichopoda]
          Length = 1051

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 33/94 (35%), Positives = 58/94 (61%)
 Frame = +1

Query: 379 RQHAKTSGMLRKILETRL*RLQKASFFEKKPISKFQLDNTLLLMTTVSPNKS*GAWKDDD 558
           ++  +     RK++E+R  +LQK  FFEK+P+S+FQ D +L     +S +K         
Sbjct: 161 KEPTRVDSFSRKLVESRPQKLQKTGFFEKRPVSRFQTD-SLSFRGVISKSKKKHPKLLSP 219

Query: 559 PNQNLILSAVNASILMEATAKILEPGMQSSNKAR 660
                ILS+ +A+ LM+A +K+LEPG+Q++++A+
Sbjct: 220 VKSPGILSSKHAARLMDAASKLLEPGLQATSRAK 253


Top