BLASTX nr result

ID: Ephedra27_contig00018944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00018944
         (418 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25219.1| unknown [Picea sitchensis]                              95   1e-17
gb|ABR16492.1| unknown [Picea sitchensis]                              81   1e-13
gb|ABR17776.1| unknown [Picea sitchensis]                              81   2e-13

>gb|ABK25219.1| unknown [Picea sitchensis]
          Length = 563

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 59/142 (41%), Positives = 87/142 (61%), Gaps = 7/142 (4%)
 Frame = +3

Query: 3   VFVTETVFVPLWDFSAYKNKLLPFLRGLACREEFLSSSSTFKMIIRFGKQLFHGNKTEDL 182
           V ++ET     WDFSAY NKLL  L+ L  R+E   ++ T K++IRFGKQL +G    D 
Sbjct: 169 VSISETALHAYWDFSAYGNKLLSCLQFLRSRDE--ETTRTVKLMIRFGKQLLNGPNLYDQ 226

Query: 183 --CKDFTSLSRMMDLYGRNRILSQFSSACSDAAITALKAKLEGSLGFVKVSSQDKISVHC 356
               D  SL R+ ++Y + R+   FS+ACS+ A+ A++ +LE  L +VKVSS+ KIS+H 
Sbjct: 227 LGSGDLISLQRLQEVYRQKRMNYIFSTACSETALRAVRLQLE-QLEYVKVSSRKKISIHV 285

Query: 357 -----IQSFRRFNVSLRFEGED 407
                +   +RFNVS+R +  +
Sbjct: 286 ADLEDLGRAQRFNVSVRCDSNE 307


>gb|ABR16492.1| unknown [Picea sitchensis]
          Length = 582

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 56/142 (39%), Positives = 82/142 (57%), Gaps = 12/142 (8%)
 Frame = +3

Query: 3   VFVTETVFVPLWDFSAYKNKLLPFLRGLACREEFLSSSSTFKMIIRFGKQLFHGNKTEDL 182
           + V+E V    WDFSAYK KLLP L+ L  +++   ++   K++IRFGKQLF G    +L
Sbjct: 178 ICVSENVVSSHWDFSAYKAKLLPCLQFLRSQDQ--ETTRAIKLMIRFGKQLFDG---PNL 232

Query: 183 CKD-----FTSLSRMMDLYGRNRILSQFSSACSDAAITALKAKLEGSLGFVKVSSQDKIS 347
           C       F SL+ + +L+   R+   FS+ACS   +T L+ +LE +  +VKVSS+ KIS
Sbjct: 233 CDQFHNGGFVSLAHLQELFRGRRLNYFFSTACSKMVVTDLRLQLEHT-EYVKVSSRKKIS 291

Query: 348 VHCIQ-------SFRRFNVSLR 392
           +             +RFNVS+R
Sbjct: 292 LQVADLEDLEEGHPQRFNVSIR 313


>gb|ABR17776.1| unknown [Picea sitchensis]
          Length = 433

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 56/142 (39%), Positives = 81/142 (57%), Gaps = 12/142 (8%)
 Frame = +3

Query: 3   VFVTETVFVPLWDFSAYKNKLLPFLRGLACREEFLSSSSTFKMIIRFGKQLFHGNKTEDL 182
           + V+E V    WDFSAYK KLLP L+ L  +E+   ++   K++IRFGKQLF G    +L
Sbjct: 29  ICVSENVVSSHWDFSAYKAKLLPCLQFLRSQEQ--ETTRAIKLMIRFGKQLFDG---PNL 83

Query: 183 CK-----DFTSLSRMMDLYGRNRILSQFSSACSDAAITALKAKLEGSLGFVKVSSQDKIS 347
           C       F SL+ + +L+   R+   FS+ACS   +T L+ + E +  +VKVSS+ KIS
Sbjct: 84  CDQFHNGSFVSLAHLQELFRGRRLNYFFSTACSKMVVTDLRLQFEHT-EYVKVSSRKKIS 142

Query: 348 VHCIQ-------SFRRFNVSLR 392
           +             +RFNVS+R
Sbjct: 143 LQVADLEDLEEGHPQRFNVSIR 164


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