BLASTX nr result
ID: Ephedra27_contig00018856
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00018856
(717 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABG85249.1| ERAD RING E3 [Arabidopsis thaliana] 64 4e-08
ref|NP_194253.2| E3 ubiquitin protein ligase RIN2 [Arabidopsis t... 64 4e-08
ref|XP_006283408.1| hypothetical protein CARUB_v10004457mg [Caps... 63 8e-08
ref|XP_002869683.1| hypothetical protein ARALYDRAFT_492309 [Arab... 63 8e-08
ref|XP_006280230.1| hypothetical protein CARUB_v10026147mg [Caps... 62 1e-07
ref|XP_002510949.1| protein binding protein, putative [Ricinus c... 62 2e-07
ref|XP_003598144.1| E3 ubiquitin-protein ligase synoviolin [Medi... 61 3e-07
ref|XP_006413327.1| hypothetical protein EUTSA_v10024774mg [Eutr... 61 4e-07
gb|EPS71683.1| hypothetical protein M569_03075 [Genlisea aurea] 60 9e-07
gb|EOY22894.1| RPM1 interacting protein 2 isoform 3 [Theobroma c... 60 9e-07
gb|EOY22893.1| RPM1 interacting protein 2 isoform 2 [Theobroma c... 60 9e-07
gb|EOY22892.1| RPM1 interacting protein 2 isoform 1 [Theobroma c... 60 9e-07
ref|XP_004240756.1| PREDICTED: E3 ubiquitin protein ligase RIN2-... 60 9e-07
ref|XP_004240755.1| PREDICTED: E3 ubiquitin protein ligase RIN2-... 60 9e-07
ref|NP_568760.1| E3 ubiquitin protein ligase RIN3 [Arabidopsis t... 59 1e-06
ref|NP_001190515.1| E3 ubiquitin protein ligase RIN3 [Arabidopsi... 59 1e-06
ref|XP_002864111.1| predicted protein [Arabidopsis lyrata subsp.... 59 1e-06
gb|ABG85250.1| ERAD RING E3 [synthetic construct] 59 1e-06
gb|AAL32977.1| AT5g51450/MFG13_16 [Arabidopsis thaliana] 59 1e-06
ref|XP_006658559.1| PREDICTED: E3 ubiquitin protein ligase RIN2-... 59 2e-06
>gb|ABG85249.1| ERAD RING E3 [Arabidopsis thaliana]
Length = 264
Score = 64.3 bits (155), Expect = 4e-08
Identities = 31/61 (50%), Positives = 41/61 (67%)
Frame = -1
Query: 675 NIGRGHGLENNGMQNRLDAGDARMASMVNTAREVLPHIPEEIIIQDLRRTNSVALTINNL 496
N GR GL + N + + +M T REV+PH+P+EII QDL+RTNSVA+T+NNL
Sbjct: 203 NGGRTGGLHLRTVSNTTNESLTNILAMAETVREVMPHVPDEIIFQDLQRTNSVAVTVNNL 262
Query: 495 L 493
L
Sbjct: 263 L 263
>ref|NP_194253.2| E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana]
gi|30686808|ref|NP_849552.1| E3 ubiquitin protein ligase
RIN2 [Arabidopsis thaliana]
gi|75304438|sp|Q8VYC8.1|RIN2_ARATH RecName: Full=E3
ubiquitin protein ligase RIN2; AltName: Full=AMF
receptor-like protein 1A; AltName: Full=RPM1-interacting
protein 2 gi|18176187|gb|AAL60000.1| unknown protein
[Arabidopsis thaliana] gi|332659628|gb|AEE85028.1| E3
ubiquitin protein ligase RIN2 [Arabidopsis thaliana]
gi|332659629|gb|AEE85029.1| E3 ubiquitin protein ligase
RIN2 [Arabidopsis thaliana]
Length = 578
Score = 64.3 bits (155), Expect = 4e-08
Identities = 31/61 (50%), Positives = 41/61 (67%)
Frame = -1
Query: 675 NIGRGHGLENNGMQNRLDAGDARMASMVNTAREVLPHIPEEIIIQDLRRTNSVALTINNL 496
N GR GL + N + + +M T REV+PH+P+EII QDL+RTNSVA+T+NNL
Sbjct: 516 NGGRTGGLHLRTVSNTTNESLTNILAMAETVREVMPHVPDEIIFQDLQRTNSVAVTVNNL 575
Query: 495 L 493
L
Sbjct: 576 L 576
>ref|XP_006283408.1| hypothetical protein CARUB_v10004457mg [Capsella rubella]
gi|565442191|ref|XP_006283409.1| hypothetical protein
CARUB_v10004457mg [Capsella rubella]
gi|482552113|gb|EOA16306.1| hypothetical protein
CARUB_v10004457mg [Capsella rubella]
gi|482552114|gb|EOA16307.1| hypothetical protein
CARUB_v10004457mg [Capsella rubella]
Length = 578
Score = 63.2 bits (152), Expect = 8e-08
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = -1
Query: 669 GRGHGLENNGMQNRLDAGDARMASMVNTAREVLPHIPEEIIIQDLRRTNSVALTINNLL 493
GR GL + + + A + +M T REV+PH+P+EII QDL+RTNSVA+T+NNLL
Sbjct: 518 GRTGGLHLRTVSSTTNESLANILAMAETVREVMPHVPDEIIFQDLQRTNSVAVTVNNLL 576
>ref|XP_002869683.1| hypothetical protein ARALYDRAFT_492309 [Arabidopsis lyrata subsp.
lyrata] gi|297315519|gb|EFH45942.1| hypothetical protein
ARALYDRAFT_492309 [Arabidopsis lyrata subsp. lyrata]
Length = 578
Score = 63.2 bits (152), Expect = 8e-08
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = -1
Query: 669 GRGHGLENNGMQNRLDAGDARMASMVNTAREVLPHIPEEIIIQDLRRTNSVALTINNLL 493
GR GL + + + A + +M T REV+PH+P+EII QDL+RTNSVA+T+NNLL
Sbjct: 518 GRTGGLHLRTVSSTTNESLANILAMAETVREVMPHVPDEIIFQDLQRTNSVAVTVNNLL 576
>ref|XP_006280230.1| hypothetical protein CARUB_v10026147mg [Capsella rubella]
gi|482548934|gb|EOA13128.1| hypothetical protein
CARUB_v10026147mg [Capsella rubella]
Length = 578
Score = 62.4 bits (150), Expect = 1e-07
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = -1
Query: 633 NRLDAGDARMASMVNTAREVLPHIPEEIIIQDLRRTNSVALTINNLL 493
+R D A + +MV T RE+LPH+P+EII QDL+RTNS A+T+NNLL
Sbjct: 529 SRADNNMASILAMVGTVREILPHVPDEIIFQDLQRTNSAAVTVNNLL 575
>ref|XP_002510949.1| protein binding protein, putative [Ricinus communis]
gi|223550064|gb|EEF51551.1| protein binding protein,
putative [Ricinus communis]
Length = 585
Score = 62.0 bits (149), Expect = 2e-07
Identities = 30/62 (48%), Positives = 40/62 (64%)
Frame = -1
Query: 678 RNIGRGHGLENNGMQNRLDAGDARMASMVNTAREVLPHIPEEIIIQDLRRTNSVALTINN 499
R+ G GL + A + +M T REVLPHIP+E+I+QDL+RTNSV +T+NN
Sbjct: 522 RSAGGTGGLHMRSPSRSANDNVANLLAMAETVREVLPHIPDELILQDLQRTNSVTVTVNN 581
Query: 498 LL 493
LL
Sbjct: 582 LL 583
>ref|XP_003598144.1| E3 ubiquitin-protein ligase synoviolin [Medicago truncatula]
gi|355487192|gb|AES68395.1| E3 ubiquitin-protein ligase
synoviolin [Medicago truncatula]
Length = 589
Score = 61.2 bits (147), Expect = 3e-07
Identities = 33/73 (45%), Positives = 43/73 (58%)
Frame = -1
Query: 711 RPRTPRVGLRFRNIGRGHGLENNGMQNRLDAGDARMASMVNTAREVLPHIPEEIIIQDLR 532
+P P G+R G GL + A + +M T REVLPHIP++II QDL+
Sbjct: 517 QPTAPSPGVRLP--GGNGGLHIRTASRSANDNLANVLAMAETVREVLPHIPDDIIFQDLQ 574
Query: 531 RTNSVALTINNLL 493
RTNSV +T+NNLL
Sbjct: 575 RTNSVTVTVNNLL 587
>ref|XP_006413327.1| hypothetical protein EUTSA_v10024774mg [Eutrema salsugineum]
gi|557114497|gb|ESQ54780.1| hypothetical protein
EUTSA_v10024774mg [Eutrema salsugineum]
Length = 578
Score = 60.8 bits (146), Expect = 4e-07
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = -1
Query: 669 GRGHGLENNGMQNRLDAGDARMASMVNTAREVLPHIPEEIIIQDLRRTNSVALTINNLL 493
GR L + + + A + +M T REV+PH+P+EII QDL+RTNSVA+T+NNLL
Sbjct: 518 GRTGALHLRTVSSATNESLANILAMAETVREVMPHVPDEIIFQDLQRTNSVAVTVNNLL 576
>gb|EPS71683.1| hypothetical protein M569_03075 [Genlisea aurea]
Length = 566
Score = 59.7 bits (143), Expect = 9e-07
Identities = 26/44 (59%), Positives = 35/44 (79%)
Frame = -1
Query: 624 DAGDARMASMVNTAREVLPHIPEEIIIQDLRRTNSVALTINNLL 493
D + + +M T REVLPHIP++II+QDL+RTNSV +T+NNLL
Sbjct: 521 DTSSSSINAMAETVREVLPHIPDDIILQDLQRTNSVVVTVNNLL 564
>gb|EOY22894.1| RPM1 interacting protein 2 isoform 3 [Theobroma cacao]
Length = 451
Score = 59.7 bits (143), Expect = 9e-07
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = -1
Query: 699 PRVGLRFRNIGRGHGLENNGMQNRLDAGDARMASMVNTAREVLPHIPEEIIIQDLRRTNS 520
P VG R+ G L + A + +M T REVLPH+P+E+I QDL+RTNS
Sbjct: 383 PNVGGRYP--GNAGSLHMRTASRTANDNIANILAMAETVREVLPHVPDELIFQDLQRTNS 440
Query: 519 VALTINNLL 493
V +T+NNLL
Sbjct: 441 VTVTVNNLL 449
>gb|EOY22893.1| RPM1 interacting protein 2 isoform 2 [Theobroma cacao]
Length = 455
Score = 59.7 bits (143), Expect = 9e-07
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = -1
Query: 699 PRVGLRFRNIGRGHGLENNGMQNRLDAGDARMASMVNTAREVLPHIPEEIIIQDLRRTNS 520
P VG R+ G L + A + +M T REVLPH+P+E+I QDL+RTNS
Sbjct: 387 PNVGGRYP--GNAGSLHMRTASRTANDNIANILAMAETVREVLPHVPDELIFQDLQRTNS 444
Query: 519 VALTINNLL 493
V +T+NNLL
Sbjct: 445 VTVTVNNLL 453
>gb|EOY22892.1| RPM1 interacting protein 2 isoform 1 [Theobroma cacao]
Length = 586
Score = 59.7 bits (143), Expect = 9e-07
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = -1
Query: 699 PRVGLRFRNIGRGHGLENNGMQNRLDAGDARMASMVNTAREVLPHIPEEIIIQDLRRTNS 520
P VG R+ G L + A + +M T REVLPH+P+E+I QDL+RTNS
Sbjct: 518 PNVGGRYP--GNAGSLHMRTASRTANDNIANILAMAETVREVLPHVPDELIFQDLQRTNS 575
Query: 519 VALTINNLL 493
V +T+NNLL
Sbjct: 576 VTVTVNNLL 584
>ref|XP_004240756.1| PREDICTED: E3 ubiquitin protein ligase RIN2-like isoform 2 [Solanum
lycopersicum]
Length = 565
Score = 59.7 bits (143), Expect = 9e-07
Identities = 30/62 (48%), Positives = 40/62 (64%)
Frame = -1
Query: 678 RNIGRGHGLENNGMQNRLDAGDARMASMVNTAREVLPHIPEEIIIQDLRRTNSVALTINN 499
R+IG GL + + +MV T REVLPHIP+EII +DL+RT+SV +T+NN
Sbjct: 502 RHIGGAGGLHLRTTSRATNNNIPNIHTMVETVREVLPHIPDEIIFEDLQRTHSVTVTVNN 561
Query: 498 LL 493
LL
Sbjct: 562 LL 563
>ref|XP_004240755.1| PREDICTED: E3 ubiquitin protein ligase RIN2-like isoform 1 [Solanum
lycopersicum]
Length = 594
Score = 59.7 bits (143), Expect = 9e-07
Identities = 30/62 (48%), Positives = 40/62 (64%)
Frame = -1
Query: 678 RNIGRGHGLENNGMQNRLDAGDARMASMVNTAREVLPHIPEEIIIQDLRRTNSVALTINN 499
R+IG GL + + +MV T REVLPHIP+EII +DL+RT+SV +T+NN
Sbjct: 531 RHIGGAGGLHLRTTSRATNNNIPNIHTMVETVREVLPHIPDEIIFEDLQRTHSVTVTVNN 590
Query: 498 LL 493
LL
Sbjct: 591 LL 592
>ref|NP_568760.1| E3 ubiquitin protein ligase RIN3 [Arabidopsis thaliana]
gi|300681231|sp|Q8W4Q5.2|RIN3_ARATH RecName: Full=E3
ubiquitin protein ligase RIN3; AltName:
Full=RPM1-interacting protein 3
gi|332008699|gb|AED96082.1| E3 ubiquitin protein ligase
RIN3 [Arabidopsis thaliana]
Length = 577
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/40 (65%), Positives = 34/40 (85%)
Frame = -1
Query: 612 ARMASMVNTAREVLPHIPEEIIIQDLRRTNSVALTINNLL 493
A + +M T REVLPH+P+EII QDL+RTNSV++T+NNLL
Sbjct: 536 ASILAMAETVREVLPHVPDEIIFQDLQRTNSVSVTVNNLL 575
>ref|NP_001190515.1| E3 ubiquitin protein ligase RIN3 [Arabidopsis thaliana]
gi|332008700|gb|AED96083.1| E3 ubiquitin protein ligase
RIN3 [Arabidopsis thaliana]
Length = 595
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/40 (65%), Positives = 34/40 (85%)
Frame = -1
Query: 612 ARMASMVNTAREVLPHIPEEIIIQDLRRTNSVALTINNLL 493
A + +M T REVLPH+P+EII QDL+RTNSV++T+NNLL
Sbjct: 554 ASILAMAETVREVLPHVPDEIIFQDLQRTNSVSVTVNNLL 593
>ref|XP_002864111.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309946|gb|EFH40370.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 577
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/40 (65%), Positives = 34/40 (85%)
Frame = -1
Query: 612 ARMASMVNTAREVLPHIPEEIIIQDLRRTNSVALTINNLL 493
A + +M T REVLPH+P+EII QDL+RTNSV++T+NNLL
Sbjct: 536 ASILAMAETVREVLPHVPDEIIFQDLQRTNSVSVTVNNLL 575
>gb|ABG85250.1| ERAD RING E3 [synthetic construct]
Length = 579
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/40 (65%), Positives = 34/40 (85%)
Frame = -1
Query: 612 ARMASMVNTAREVLPHIPEEIIIQDLRRTNSVALTINNLL 493
A + +M T REVLPH+P+EII QDL+RTNSV++T+NNLL
Sbjct: 537 ASILAMAETVREVLPHVPDEIIFQDLQRTNSVSVTVNNLL 576
>gb|AAL32977.1| AT5g51450/MFG13_16 [Arabidopsis thaliana]
Length = 577
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/40 (65%), Positives = 34/40 (85%)
Frame = -1
Query: 612 ARMASMVNTAREVLPHIPEEIIIQDLRRTNSVALTINNLL 493
A + +M T REVLPH+P+EII QDL+RTNSV++T+NNLL
Sbjct: 536 ASILAMAETVREVLPHVPDEIIFQDLQRTNSVSVTVNNLL 575
>ref|XP_006658559.1| PREDICTED: E3 ubiquitin protein ligase RIN2-like, partial [Oryza
brachyantha]
Length = 532
Score = 58.5 bits (140), Expect = 2e-06
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = -1
Query: 657 GLENNGMQNRLDAGDARMASMVNTAREVLPHIPEEIIIQDLRRTNSVALTINNLL 493
GL G ++ + + SMV+ REVLPHIP+E+II+DL RTN++ T+NNLL
Sbjct: 475 GLRLRGTARTVNGSMSEVLSMVDRVREVLPHIPDELIIEDLMRTNNINATVNNLL 529