BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00018757
         (835 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006829322.1| hypothetical protein AMTR_s00202p00033660 [A...   267   7e-73
ref|XP_006649448.1| PREDICTED: DNA topoisomerase 3-alpha-like [O...   266   1e-71
emb|CBI37515.3| unnamed protein product [Vitis vinifera]              266   2e-71
gb|EEE58379.1| hypothetical protein OsJ_09535 [Oryza sativa Japo...   265   4e-71
gb|EEC74578.1| hypothetical protein OsI_10148 [Oryza sativa Indi...   265   4e-71
ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group] g...   265   4e-71
gb|AAM15783.1|AC104428_4 Putative DNA topoisomerase III [Oryza s...   265   4e-71
tpg|DAA43538.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea m...   265   8e-71
gb|EEC84165.1| hypothetical protein OsI_30540 [Oryza sativa Indi...   262   2e-70
ref|XP_002465810.1| hypothetical protein SORBIDRAFT_01g046210 [S...   264   2e-70
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...   261   4e-70
ref|XP_004985595.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   262   7e-70
ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [F...   259   9e-70
gb|EOX92637.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]       255   6e-69
gb|EOX92638.1| Topoisomerase 3alpha isoform 2, partial [Theobrom...   255   6e-69
gb|EMT33584.1| DNA topoisomerase 3-alpha [Aegilops tauschii]          257   1e-68
ref|XP_006279975.1| hypothetical protein CARUB_v10025845mg [Caps...   253   2e-68
ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   258   3e-68
ref|XP_003558748.1| PREDICTED: DNA topoisomerase 3-alpha [Brachy...   255   4e-68
ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   257   4e-68

>ref|XP_006829322.1| hypothetical protein AMTR_s00202p00033660 [Amborella trichopoda]
           gi|548834342|gb|ERM96738.1| hypothetical protein
           AMTR_s00202p00033660 [Amborella trichopoda]
          Length = 988

 Score =  267 bits (683), Expect(2) = 7e-73
 Identities = 124/173 (71%), Positives = 149/173 (86%), Gaps = 1/173 (0%)
 Frame = +3

Query: 183 EIDLRIGASFTRLQIMLLRDAFLLPFTDDERKLILSYGPCQFPTLGFVVERYWEIQAHVP 362
           EIDLRIGASFTR Q MLL++AF+L  +DD++ +I+SYGPCQFPTLGFVVERYWEIQAH P
Sbjct: 256 EIDLRIGASFTRFQTMLLKNAFVLNISDDDKNVIVSYGPCQFPTLGFVVERYWEIQAHEP 315

Query: 363 EEFWTINCSHTSDDGTSTFNWIHGRLFDYAAA-VIYELCVNEPTATVTKITHEEKRKYPH 539
           EEFWTINCSH +D+G +TFNW  G LFDY+ A +IYE+CV EPTATV K++H+E+RKYP 
Sbjct: 316 EEFWTINCSHKTDEGIATFNWTRGHLFDYSCALIIYEMCVEEPTATVKKVSHQERRKYPP 375

Query: 540 YPLSTVELQKRGS*YFGLTPGNIMKVAEELCQIGFISYPRTETDAFSPNTDLQ 698
           +PLST+ELQKR S YF ++  + MKVAE+L Q GFISYPRTETD+FSPNTDLQ
Sbjct: 376 HPLSTLELQKRASQYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSPNTDLQ 428



 Score = 34.3 bits (77), Expect(2) = 7e-73
 Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +1

Query: 37  DCWTSYDSS--S*EIHHAAQNLKVPDQRLVDAVDARQ 141
           D W ++ S+    EI HA QNL  P+Q   DAVDARQ
Sbjct: 219 DIWRAHFSALIDREIRHAVQNLGRPNQLFSDAVDARQ 255


>ref|XP_006649448.1| PREDICTED: DNA topoisomerase 3-alpha-like [Oryza brachyantha]
          Length = 923

 Score =  266 bits (681), Expect(2) = 1e-71
 Identities = 128/172 (74%), Positives = 145/172 (84%), Gaps = 1/172 (0%)
 Frame = +3

Query: 183 EIDLRIGASFTRLQIMLLRDAFLLPFTDDERKLILSYGPCQFPTLGFVVERYWEIQAHVP 362
           EIDLRIGASFTR Q MLLRDAF+L  T DER +ILSYGPCQFPTLGF+VER+WEIQAH P
Sbjct: 187 EIDLRIGASFTRFQTMLLRDAFVLDDTGDERNMILSYGPCQFPTLGFIVERFWEIQAHEP 246

Query: 363 EEFWTINCSHTSDDGTSTFNWIHGRLFDYAAA-VIYELCVNEPTATVTKITHEEKRKYPH 539
           EEFWTINCSHTSD+GT++F WI G LFDY++A VIYE+CV EP ATV  + ++EK KYP 
Sbjct: 247 EEFWTINCSHTSDEGTASFGWIRGHLFDYSSAVVIYEMCVEEPMATVQNVRNQEKLKYPP 306

Query: 540 YPLSTVELQKRGS*YFGLTPGNIMKVAEELCQIGFISYPRTETDAFSPNTDL 695
           YPLST+ELQKR S YF ++  + MKVAEEL Q GFISYPRTETD FSPNTDL
Sbjct: 307 YPLSTIELQKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNTDL 358



 Score = 30.8 bits (68), Expect(2) = 1e-71
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +1

Query: 70  EIHHAAQNLKVPDQRLVDAVDARQ 141
           EIH A Q+L  P++   DAVDARQ
Sbjct: 163 EIHEAVQHLDRPNKLFADAVDARQ 186


>emb|CBI37515.3| unnamed protein product [Vitis vinifera]
          Length = 373

 Score =  266 bits (679), Expect(2) = 2e-71
 Identities = 127/195 (65%), Positives = 149/195 (76%), Gaps = 1/195 (0%)
 Frame = +3

Query: 183 EIDLRIGASFTRLQIMLLRDAFLLPFTDDERKLILSYGPCQFPTLGFVVERYWEIQAHVP 362
           EIDLRIGASFTR Q MLLRDAF+L F  D+R L+LSYGPCQFPTLGFVVERYWEIQ+H P
Sbjct: 177 EIDLRIGASFTRFQTMLLRDAFVLDFAADDRNLVLSYGPCQFPTLGFVVERYWEIQSHEP 236

Query: 363 EEFWTINCSHTSDDGTSTFNWIHGRLFDYAAAV-IYELCVNEPTATVTKITHEEKRKYPH 539
           EEFWTINCSH SD+GTSTFNW+   LFDY  AV IYE+C+ EPTATVTK+  +EK KYP 
Sbjct: 237 EEFWTINCSHKSDEGTSTFNWMRAHLFDYTCAVIIYEMCIQEPTATVTKVRQQEKLKYPP 296

Query: 540 YPLSTVELQKRGS*YFGLTPGNIMKVAEELCQIGFISYPRTETDAFSPNTDLQDTHAELA 719
           +PL+T+EL+KR S YF ++  + MKVAE+L Q GFISYPRTETD FS  TDL     ++ 
Sbjct: 297 HPLNTIELEKRASRYFHMSSEHTMKVAEDLYQTGFISYPRTETDYFSERTDLHSYLIKIT 356

Query: 720 KKRRRTVSKPYSRSI 764
            K+       Y R +
Sbjct: 357 MKKTEKEGSEYDRRV 371



 Score = 31.2 bits (69), Expect(2) = 2e-71
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +1

Query: 70  EIHHAAQNLKVPDQRLVDAVDARQ 141
           EIH + QNL  P+Q   DAVD RQ
Sbjct: 153 EIHESVQNLVRPNQLFADAVDVRQ 176


>gb|EEE58379.1| hypothetical protein OsJ_09535 [Oryza sativa Japonica Group]
          Length = 983

 Score =  265 bits (677), Expect(2) = 4e-71
 Identities = 128/181 (70%), Positives = 149/181 (82%), Gaps = 2/181 (1%)
 Frame = +3

Query: 183 EIDLRIGASFTRLQIMLLRDAFLLPFTDDERKLILSYGPCQFPTLGFVVERYWEIQAHVP 362
           EIDLRIGASFTR Q MLL+DAF+L  T D+R +ILSYGPCQFPTLGF+VER+WEIQAH P
Sbjct: 285 EIDLRIGASFTRFQTMLLKDAFVLDDTGDDRNIILSYGPCQFPTLGFIVERFWEIQAHEP 344

Query: 363 EEFWTINCSHTSDDGTSTFNWIHGRLFDYAAA-VIYELCVNEPTATVTKITHEEKRKYPH 539
           EEFWTINCSHTSD+GT++F WI G LFDY++A VIYE+CV EP ATV  + ++EK KYP 
Sbjct: 345 EEFWTINCSHTSDEGTASFGWIRGHLFDYSSAVVIYEMCVEEPMATVQNVRNQEKLKYPP 404

Query: 540 YPLSTVELQKRGS*YFGLTPGNIMKVAEELCQIGFISYPRTETDAFSPNTDLQD-THAEL 716
           YPLST+ELQKR S YF ++  + MKVAEEL Q GFISYPRTETD FSPNTDL    H ++
Sbjct: 405 YPLSTIELQKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNTDLHSIVHEQV 464

Query: 717 A 719
           A
Sbjct: 465 A 465



 Score = 30.8 bits (68), Expect(2) = 4e-71
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +1

Query: 70  EIHHAAQNLKVPDQRLVDAVDARQ 141
           EIH A Q+L  P++   DAVDARQ
Sbjct: 261 EIHEAVQHLDRPNKLFADAVDARQ 284


>gb|EEC74578.1| hypothetical protein OsI_10148 [Oryza sativa Indica Group]
          Length = 981

 Score =  265 bits (677), Expect(2) = 4e-71
 Identities = 128/181 (70%), Positives = 149/181 (82%), Gaps = 2/181 (1%)
 Frame = +3

Query: 183 EIDLRIGASFTRLQIMLLRDAFLLPFTDDERKLILSYGPCQFPTLGFVVERYWEIQAHVP 362
           EIDLRIGASFTR Q MLL+DAF+L  T D+R +ILSYGPCQFPTLGF+VER+WEIQAH P
Sbjct: 285 EIDLRIGASFTRFQTMLLKDAFVLDDTGDDRNIILSYGPCQFPTLGFIVERFWEIQAHEP 344

Query: 363 EEFWTINCSHTSDDGTSTFNWIHGRLFDYAAA-VIYELCVNEPTATVTKITHEEKRKYPH 539
           EEFWTINCSHTSD+GT++F WI G LFDY++A VIYE+CV EP ATV  + ++EK KYP 
Sbjct: 345 EEFWTINCSHTSDEGTASFGWIRGHLFDYSSAVVIYEMCVEEPMATVQNVRNQEKLKYPP 404

Query: 540 YPLSTVELQKRGS*YFGLTPGNIMKVAEELCQIGFISYPRTETDAFSPNTDLQD-THAEL 716
           YPLST+ELQKR S YF ++  + MKVAEEL Q GFISYPRTETD FSPNTDL    H ++
Sbjct: 405 YPLSTIELQKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNTDLHSIVHEQV 464

Query: 717 A 719
           A
Sbjct: 465 A 465



 Score = 30.8 bits (68), Expect(2) = 4e-71
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +1

Query: 70  EIHHAAQNLKVPDQRLVDAVDARQ 141
           EIH A Q+L  P++   DAVDARQ
Sbjct: 261 EIHEAVQHLDRPNKLFADAVDARQ 284


>ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group]
           gi|255674230|dbj|BAH92006.1| Os03g0165000 [Oryza sativa
           Japonica Group]
          Length = 928

 Score =  265 bits (677), Expect(2) = 4e-71
 Identities = 128/181 (70%), Positives = 149/181 (82%), Gaps = 2/181 (1%)
 Frame = +3

Query: 183 EIDLRIGASFTRLQIMLLRDAFLLPFTDDERKLILSYGPCQFPTLGFVVERYWEIQAHVP 362
           EIDLRIGASFTR Q MLL+DAF+L  T D+R +ILSYGPCQFPTLGF+VER+WEIQAH P
Sbjct: 187 EIDLRIGASFTRFQTMLLKDAFVLDDTGDDRNIILSYGPCQFPTLGFIVERFWEIQAHEP 246

Query: 363 EEFWTINCSHTSDDGTSTFNWIHGRLFDYAAA-VIYELCVNEPTATVTKITHEEKRKYPH 539
           EEFWTINCSHTSD+GT++F WI G LFDY++A VIYE+CV EP ATV  + ++EK KYP 
Sbjct: 247 EEFWTINCSHTSDEGTASFGWIRGHLFDYSSAVVIYEMCVEEPMATVQNVRNQEKLKYPP 306

Query: 540 YPLSTVELQKRGS*YFGLTPGNIMKVAEELCQIGFISYPRTETDAFSPNTDLQD-THAEL 716
           YPLST+ELQKR S YF ++  + MKVAEEL Q GFISYPRTETD FSPNTDL    H ++
Sbjct: 307 YPLSTIELQKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNTDLHSIVHEQV 366

Query: 717 A 719
           A
Sbjct: 367 A 367



 Score = 30.8 bits (68), Expect(2) = 4e-71
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +1

Query: 70  EIHHAAQNLKVPDQRLVDAVDARQ 141
           EIH A Q+L  P++   DAVDARQ
Sbjct: 163 EIHEAVQHLDRPNKLFADAVDARQ 186


>gb|AAM15783.1|AC104428_4 Putative DNA topoisomerase III [Oryza sativa Japonica Group]
           gi|108706350|gb|ABF94145.1| DNA topoisomerase family
           protein, expressed [Oryza sativa Japonica Group]
          Length = 912

 Score =  265 bits (677), Expect(2) = 4e-71
 Identities = 128/181 (70%), Positives = 149/181 (82%), Gaps = 2/181 (1%)
 Frame = +3

Query: 183 EIDLRIGASFTRLQIMLLRDAFLLPFTDDERKLILSYGPCQFPTLGFVVERYWEIQAHVP 362
           EIDLRIGASFTR Q MLL+DAF+L  T D+R +ILSYGPCQFPTLGF+VER+WEIQAH P
Sbjct: 285 EIDLRIGASFTRFQTMLLKDAFVLDDTGDDRNIILSYGPCQFPTLGFIVERFWEIQAHEP 344

Query: 363 EEFWTINCSHTSDDGTSTFNWIHGRLFDYAAA-VIYELCVNEPTATVTKITHEEKRKYPH 539
           EEFWTINCSHTSD+GT++F WI G LFDY++A VIYE+CV EP ATV  + ++EK KYP 
Sbjct: 345 EEFWTINCSHTSDEGTASFGWIRGHLFDYSSAVVIYEMCVEEPMATVQNVRNQEKLKYPP 404

Query: 540 YPLSTVELQKRGS*YFGLTPGNIMKVAEELCQIGFISYPRTETDAFSPNTDLQD-THAEL 716
           YPLST+ELQKR S YF ++  + MKVAEEL Q GFISYPRTETD FSPNTDL    H ++
Sbjct: 405 YPLSTIELQKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNTDLHSIVHEQV 464

Query: 717 A 719
           A
Sbjct: 465 A 465



 Score = 30.8 bits (68), Expect(2) = 4e-71
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +1

Query: 70  EIHHAAQNLKVPDQRLVDAVDARQ 141
           EIH A Q+L  P++   DAVDARQ
Sbjct: 261 EIHEAVQHLDRPNKLFADAVDARQ 284


>tpg|DAA43538.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea mays]
          Length = 915

 Score =  265 bits (678), Expect(2) = 8e-71
 Identities = 129/196 (65%), Positives = 156/196 (79%), Gaps = 1/196 (0%)
 Frame = +3

Query: 183 EIDLRIGASFTRLQIMLLRDAFLLPFTDDERKLILSYGPCQFPTLGFVVERYWEIQAHVP 362
           EIDLRIGASFTR Q MLL+DAF++  T DER L+LSYGPCQFPTLGF+VER+WEIQAH P
Sbjct: 184 EIDLRIGASFTRFQTMLLKDAFVIDVTGDERSLVLSYGPCQFPTLGFIVERFWEIQAHEP 243

Query: 363 EEFWTINCSHTSDDGTSTFNWIHGRLFDYAAAV-IYELCVNEPTATVTKITHEEKRKYPH 539
           EEFWTINC+HTSD+GT++F WI G LFDY+ A+ IYE+CV+EP ATV  + ++EK KYP 
Sbjct: 244 EEFWTINCTHTSDEGTASFGWIRGHLFDYSCAISIYEMCVSEPMATVQNVRNQEKLKYPP 303

Query: 540 YPLSTVELQKRGS*YFGLTPGNIMKVAEELCQIGFISYPRTETDAFSPNTDLQDTHAELA 719
           YPLSTVELQKR S YF ++  + MKVAEEL Q GFISYPRTETD FSPNTDL   HA + 
Sbjct: 304 YPLSTVELQKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNTDL---HAIVR 360

Query: 720 KKRRRTVSKPYSRSIV 767
           ++    V   Y++ ++
Sbjct: 361 EQVNHPVWGAYAQRLL 376



 Score = 29.3 bits (64), Expect(2) = 8e-71
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +1

Query: 70  EIHHAAQNLKVPDQRLVDAVDARQ 141
           EIH + Q+L  P++   DAVDARQ
Sbjct: 160 EIHESVQHLGRPNKLFADAVDARQ 183


>gb|EEC84165.1| hypothetical protein OsI_30540 [Oryza sativa Indica Group]
          Length = 897

 Score =  262 bits (670), Expect(2) = 2e-70
 Identities = 127/185 (68%), Positives = 149/185 (80%), Gaps = 2/185 (1%)
 Frame = +3

Query: 183 EIDLRIGASFTRLQIMLLRDAFLLPFTDDERKLILSYGPCQFPTLGFVVERYWEIQAHVP 362
           EIDLRIGASFTR Q +LL+DAF+L  T D+R +ILSYGPCQFPTLGF+VER+WEIQAH P
Sbjct: 187 EIDLRIGASFTRFQTVLLKDAFVLDDTGDDRNIILSYGPCQFPTLGFIVERFWEIQAHEP 246

Query: 363 EEFWTINCSHTSDDGTSTFNWIHGRLFDYAAA-VIYELCVNEPTATVTKITHEEKRKYPH 539
           EEFWTINCSHTSD+GT++F WI G LFDY++A VIYE+CV EP ATV  + ++EK KYP 
Sbjct: 247 EEFWTINCSHTSDEGTASFGWIRGHLFDYSSAVVIYEMCVKEPMATVQNVRNQEKLKYPP 306

Query: 540 YPLSTVELQKRGS*YFGLTPGNIMKVAEELCQIGFISYPRTETDAFSPNTDLQD-THAEL 716
           YPLST+ELQKR S YF ++  + MKVAEEL Q GFISYPRTETD FSPN DL    H ++
Sbjct: 307 YPLSTIELQKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNIDLHSIVHEQV 366

Query: 717 AKKRR 731
           A   R
Sbjct: 367 AHPNR 371



 Score = 30.8 bits (68), Expect(2) = 2e-70
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +1

Query: 70  EIHHAAQNLKVPDQRLVDAVDARQ 141
           EIH A Q+L  P++   DAVDARQ
Sbjct: 163 EIHEAVQHLDRPNKLFADAVDARQ 186


>ref|XP_002465810.1| hypothetical protein SORBIDRAFT_01g046210 [Sorghum bicolor]
           gi|241919664|gb|EER92808.1| hypothetical protein
           SORBIDRAFT_01g046210 [Sorghum bicolor]
          Length = 860

 Score =  264 bits (674), Expect(2) = 2e-70
 Identities = 128/196 (65%), Positives = 156/196 (79%), Gaps = 1/196 (0%)
 Frame = +3

Query: 183 EIDLRIGASFTRLQIMLLRDAFLLPFTDDERKLILSYGPCQFPTLGFVVERYWEIQAHVP 362
           EIDLRIGASFTR Q MLL+DAF++  T D+R L+LSYGPCQFPTLGF+VER+WEIQAH P
Sbjct: 184 EIDLRIGASFTRFQTMLLKDAFVINVTGDDRNLVLSYGPCQFPTLGFIVERFWEIQAHEP 243

Query: 363 EEFWTINCSHTSDDGTSTFNWIHGRLFDYAAAV-IYELCVNEPTATVTKITHEEKRKYPH 539
           EEFWTINC+HTSD+GT++F WI G LFDY+ A+ IYE+CV+EP ATV  + ++EK KYP 
Sbjct: 244 EEFWTINCTHTSDEGTASFGWIRGHLFDYSCAISIYEMCVSEPMATVQNVRNQEKLKYPP 303

Query: 540 YPLSTVELQKRGS*YFGLTPGNIMKVAEELCQIGFISYPRTETDAFSPNTDLQDTHAELA 719
           YPLSTVELQKR S YF ++  + MKVAEEL Q GFISYPRTETD FSPNTDL   HA + 
Sbjct: 304 YPLSTVELQKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNTDL---HAIVR 360

Query: 720 KKRRRTVSKPYSRSIV 767
           ++    V   Y++ ++
Sbjct: 361 EQVNHPVWGAYAQRLL 376



 Score = 29.3 bits (64), Expect(2) = 2e-70
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +1

Query: 70  EIHHAAQNLKVPDQRLVDAVDARQ 141
           EIH + Q+L  P++   DAVDARQ
Sbjct: 160 EIHESVQHLGRPNKLFADAVDARQ 183


>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score =  261 bits (667), Expect(2) = 4e-70
 Identities = 124/172 (72%), Positives = 142/172 (82%), Gaps = 1/172 (0%)
 Frame = +3

Query: 183 EIDLRIGASFTRLQIMLLRDAFLLPFTDDERKLILSYGPCQFPTLGFVVERYWEIQAHVP 362
           EIDLRIGASFTR Q MLLRDAF+L F  D+R L+LSYGPCQFPTLGFVVERYWEIQ+H P
Sbjct: 177 EIDLRIGASFTRFQTMLLRDAFVLDFAADDRNLVLSYGPCQFPTLGFVVERYWEIQSHEP 236

Query: 363 EEFWTINCSHTSDDGTSTFNWIHGRLFDYAAAV-IYELCVNEPTATVTKITHEEKRKYPH 539
           EEFWTINCSH SD+GTSTFNW+   LFDY  AV IYE+C+ EPTATVTK+  +EK KYP 
Sbjct: 237 EEFWTINCSHKSDEGTSTFNWMRAHLFDYTCAVIIYEMCIQEPTATVTKVRQQEKLKYPP 296

Query: 540 YPLSTVELQKRGS*YFGLTPGNIMKVAEELCQIGFISYPRTETDAFSPNTDL 695
           +PL+T+EL+KR S YF ++  + MKVAE+L Q GFISYPRTETD FS  TDL
Sbjct: 297 HPLNTIELEKRASRYFHMSSEHTMKVAEDLYQTGFISYPRTETDYFSERTDL 348



 Score = 31.2 bits (69), Expect(2) = 4e-70
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +1

Query: 70  EIHHAAQNLKVPDQRLVDAVDARQ 141
           EIH + QNL  P+Q   DAVD RQ
Sbjct: 153 EIHESVQNLVRPNQLFADAVDVRQ 176


>ref|XP_004985595.1| PREDICTED: DNA topoisomerase 3-alpha-like [Setaria italica]
          Length = 917

 Score =  262 bits (670), Expect(2) = 7e-70
 Identities = 128/196 (65%), Positives = 154/196 (78%), Gaps = 1/196 (0%)
 Frame = +3

Query: 183 EIDLRIGASFTRLQIMLLRDAFLLPFTDDERKLILSYGPCQFPTLGFVVERYWEIQAHVP 362
           EIDLRIGASFTR Q MLL+DAF++  T D+R L+LSYGPCQFPTLGF+VER+WEIQAH P
Sbjct: 185 EIDLRIGASFTRFQTMLLKDAFVIDVTGDDRNLVLSYGPCQFPTLGFIVERFWEIQAHEP 244

Query: 363 EEFWTINCSHTSDDGTSTFNWIHGRLFDYAAAVI-YELCVNEPTATVTKITHEEKRKYPH 539
           EEFWTINC+HTSD+GT++F WI G LFDY +AVI YE+CV EP ATV  + ++EK KYP 
Sbjct: 245 EEFWTINCTHTSDEGTASFGWIRGHLFDYPSAVILYEMCVEEPMATVQNVRNQEKLKYPP 304

Query: 540 YPLSTVELQKRGS*YFGLTPGNIMKVAEELCQIGFISYPRTETDAFSPNTDLQDTHAELA 719
           YPLST+ELQKR S YF ++  + MKVAEEL Q GFISYPRTETD FSPNTDL   HA + 
Sbjct: 305 YPLSTLELQKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNTDL---HAIVR 361

Query: 720 KKRRRTVSKPYSRSIV 767
           ++    V   Y+  ++
Sbjct: 362 EQVEHPVWGAYAHRLL 377



 Score = 29.3 bits (64), Expect(2) = 7e-70
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +1

Query: 70  EIHHAAQNLKVPDQRLVDAVDARQ 141
           EIH + Q+L  P++   DAVDARQ
Sbjct: 161 EIHESVQHLGRPNKLFADAVDARQ 184


>ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [Fragaria vesca subsp.
           vesca]
          Length = 908

 Score =  259 bits (663), Expect(2) = 9e-70
 Identities = 122/172 (70%), Positives = 142/172 (82%), Gaps = 1/172 (0%)
 Frame = +3

Query: 183 EIDLRIGASFTRLQIMLLRDAFLLPFTDDERKLILSYGPCQFPTLGFVVERYWEIQAHVP 362
           EIDLRIGASFTR Q MLLRDAF++    D+R L+LSYGPCQFPTLGF+VERYWEIQ+H P
Sbjct: 178 EIDLRIGASFTRFQTMLLRDAFVIDSATDDRNLVLSYGPCQFPTLGFIVERYWEIQSHEP 237

Query: 363 EEFWTINCSHTSDDGTSTFNWIHGRLFDYAAAV-IYELCVNEPTATVTKITHEEKRKYPH 539
           EEFWTINCSH SD+GT+TF W+ G LFD+A AV IYE+CV +P ATVTK+  +EK KYP 
Sbjct: 238 EEFWTINCSHRSDEGTATFGWMRGHLFDHACAVIIYEMCVEDPIATVTKVRQQEKPKYPP 297

Query: 540 YPLSTVELQKRGS*YFGLTPGNIMKVAEELCQIGFISYPRTETDAFSPNTDL 695
           YPL+T+EL+KR S YF ++  + MKVAEEL Q GFISYPRTETD FSP TDL
Sbjct: 298 YPLNTIELEKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDGFSPRTDL 349



 Score = 31.6 bits (70), Expect(2) = 9e-70
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +1

Query: 70  EIHHAAQNLKVPDQRLVDAVDARQ 141
           +IHHA QNL   ++   DAVDARQ
Sbjct: 154 DIHHAVQNLDNANKYFADAVDARQ 177


>gb|EOX92637.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]
          Length = 914

 Score =  255 bits (651), Expect(2) = 6e-69
 Identities = 119/172 (69%), Positives = 139/172 (80%), Gaps = 1/172 (0%)
 Frame = +3

Query: 183 EIDLRIGASFTRLQIMLLRDAFLLPFTDDERKLILSYGPCQFPTLGFVVERYWEIQAHVP 362
           EIDLRIGASFTR Q M+LRD F++    D+R L+LSYGPCQFPTLGFVVERYWE+Q+H P
Sbjct: 181 EIDLRIGASFTRFQTMMLRDKFVIDSATDDRNLVLSYGPCQFPTLGFVVERYWEVQSHEP 240

Query: 363 EEFWTINCSHTSDDGTSTFNWIHGRLFDYAAAVI-YELCVNEPTATVTKITHEEKRKYPH 539
           EEFWTINCSH  D+G +TFNW+ G LFD+  AVI YE+CV EP ATVTK+ H+EK KYP 
Sbjct: 241 EEFWTINCSHKLDEGVATFNWMRGHLFDHTCAVIVYEMCVQEPNATVTKVRHQEKLKYPP 300

Query: 540 YPLSTVELQKRGS*YFGLTPGNIMKVAEELCQIGFISYPRTETDAFSPNTDL 695
           YPLST+EL+KR S YF ++  + MKVAE+L Q GFISYPRTETD FS  TDL
Sbjct: 301 YPLSTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDCFSSRTDL 352



 Score = 33.5 bits (75), Expect(2) = 6e-69
 Identities = 16/24 (66%), Positives = 17/24 (70%)
 Frame = +1

Query: 70  EIHHAAQNLKVPDQRLVDAVDARQ 141
           EIHHA QNL  P+    DAVDARQ
Sbjct: 157 EIHHATQNLVDPNPWFSDAVDARQ 180


>gb|EOX92638.1| Topoisomerase 3alpha isoform 2, partial [Theobroma cacao]
          Length = 845

 Score =  255 bits (651), Expect(2) = 6e-69
 Identities = 119/172 (69%), Positives = 139/172 (80%), Gaps = 1/172 (0%)
 Frame = +3

Query: 183 EIDLRIGASFTRLQIMLLRDAFLLPFTDDERKLILSYGPCQFPTLGFVVERYWEIQAHVP 362
           EIDLRIGASFTR Q M+LRD F++    D+R L+LSYGPCQFPTLGFVVERYWE+Q+H P
Sbjct: 181 EIDLRIGASFTRFQTMMLRDKFVIDSATDDRNLVLSYGPCQFPTLGFVVERYWEVQSHEP 240

Query: 363 EEFWTINCSHTSDDGTSTFNWIHGRLFDYAAAVI-YELCVNEPTATVTKITHEEKRKYPH 539
           EEFWTINCSH  D+G +TFNW+ G LFD+  AVI YE+CV EP ATVTK+ H+EK KYP 
Sbjct: 241 EEFWTINCSHKLDEGVATFNWMRGHLFDHTCAVIVYEMCVQEPNATVTKVRHQEKLKYPP 300

Query: 540 YPLSTVELQKRGS*YFGLTPGNIMKVAEELCQIGFISYPRTETDAFSPNTDL 695
           YPLST+EL+KR S YF ++  + MKVAE+L Q GFISYPRTETD FS  TDL
Sbjct: 301 YPLSTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDCFSSRTDL 352



 Score = 33.5 bits (75), Expect(2) = 6e-69
 Identities = 16/24 (66%), Positives = 17/24 (70%)
 Frame = +1

Query: 70  EIHHAAQNLKVPDQRLVDAVDARQ 141
           EIHHA QNL  P+    DAVDARQ
Sbjct: 157 EIHHATQNLVDPNPWFSDAVDARQ 180


>gb|EMT33584.1| DNA topoisomerase 3-alpha [Aegilops tauschii]
          Length = 745

 Score =  257 bits (656), Expect(2) = 1e-68
 Identities = 123/172 (71%), Positives = 145/172 (84%), Gaps = 1/172 (0%)
 Frame = +3

Query: 183 EIDLRIGASFTRLQIMLLRDAFLLPFTDDERKLILSYGPCQFPTLGFVVERYWEIQAHVP 362
           EIDLRIGASFTR Q MLL+DAF+L  + +ER ++LSYGPCQFPTLGF+VER+WEIQAH P
Sbjct: 152 EIDLRIGASFTRFQTMLLKDAFVLDVSGEERNMVLSYGPCQFPTLGFIVERFWEIQAHEP 211

Query: 363 EEFWTINCSHTSDDGTSTFNWIHGRLFDYAAA-VIYELCVNEPTATVTKITHEEKRKYPH 539
           EEFWTINCSHTSD+GT++F WI G LFDY++A VIYE+CV+EP ATV  + ++EK KYP 
Sbjct: 212 EEFWTINCSHTSDEGTASFIWIRGHLFDYSSAVVIYEMCVHEPMATVQNVRNQEKLKYPP 271

Query: 540 YPLSTVELQKRGS*YFGLTPGNIMKVAEELCQIGFISYPRTETDAFSPNTDL 695
           YPLSTVELQKR S    ++  + MKVAEEL Q GFISYPRTETD+FSPNTDL
Sbjct: 272 YPLSTVELQKRASRCCRMSSEHTMKVAEELYQAGFISYPRTETDSFSPNTDL 323



 Score = 30.8 bits (68), Expect(2) = 1e-68
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +1

Query: 70  EIHHAAQNLKVPDQRLVDAVDARQ 141
           EIH A Q+L  P++   DAVDARQ
Sbjct: 128 EIHEAVQHLARPNKLFADAVDARQ 151


>ref|XP_006279975.1| hypothetical protein CARUB_v10025845mg [Capsella rubella]
           gi|482548679|gb|EOA12873.1| hypothetical protein
           CARUB_v10025845mg [Capsella rubella]
          Length = 919

 Score =  253 bits (646), Expect(2) = 2e-68
 Identities = 123/181 (67%), Positives = 142/181 (78%), Gaps = 2/181 (1%)
 Frame = +3

Query: 162 ETTKLDMEIDLRIGASFTRLQIMLLRDAFLLPFTDDERKLILSYGPCQFPTLGFVVERYW 341
           E      EIDLRIGASFTR Q MLLRD F +  T +ER  ++SYGPCQFPTLGF+VERYW
Sbjct: 177 EAVDARQEIDLRIGASFTRFQTMLLRDRFAIDSTGEERSRVISYGPCQFPTLGFIVERYW 236

Query: 342 EIQAHVPEEFWTINCSHTSDDGTSTFNWIHGRLFDYAAAVI-YELCVNEPTATVTKITHE 518
           EIQAH PEEFWTINCSH S++G +TFNW+ G LFDYA+AVI YE+CV EPTATV  + H 
Sbjct: 237 EIQAHEPEEFWTINCSHQSEEGIATFNWMRGHLFDYASAVILYEMCVEEPTATVMNVPHP 296

Query: 519 EKR-KYPHYPLSTVELQKRGS*YFGLTPGNIMKVAEELCQIGFISYPRTETDAFSPNTDL 695
            +R KYP YPL+T+EL+KR S YF L+  + MKVAEEL Q GFISYPRTETDAFS  TDL
Sbjct: 297 RERFKYPPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDAFSSRTDL 356

Query: 696 Q 698
           +
Sbjct: 357 R 357



 Score = 33.9 bits (76), Expect(2) = 2e-68
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = +1

Query: 70  EIHHAAQNLKVPDQRLVDAVDARQ 141
           EIH A QNL+ P+Q   +AVDARQ
Sbjct: 160 EIHEAVQNLRDPNQLFAEAVDARQ 183


>ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum lycopersicum]
          Length = 910

 Score =  258 bits (658), Expect(2) = 3e-68
 Identities = 122/173 (70%), Positives = 140/173 (80%), Gaps = 1/173 (0%)
 Frame = +3

Query: 183 EIDLRIGASFTRLQIMLLRDAFLLPFTDDERKLILSYGPCQFPTLGFVVERYWEIQAHVP 362
           EIDLRIGASFTR Q MLLR AF+L F  D+R L+LSYGPCQFPTLGFVVERYWEIQAH P
Sbjct: 187 EIDLRIGASFTRFQTMLLRGAFVLDFATDDRNLVLSYGPCQFPTLGFVVERYWEIQAHEP 246

Query: 363 EEFWTINCSHTSDDGTSTFNWIHGRLFDYAAAV-IYELCVNEPTATVTKITHEEKRKYPH 539
           EEFWTINC+H SD+GT+TFNW+ G LFDY   V IYE+C+ EP ATVTK+  +EK KYP 
Sbjct: 247 EEFWTINCTHNSDEGTATFNWMRGHLFDYTCGVMIYEMCIQEPIATVTKVKQQEKLKYPP 306

Query: 540 YPLSTVELQKRGS*YFGLTPGNIMKVAEELCQIGFISYPRTETDAFSPNTDLQ 698
           +PLST+EL+KR S YF ++    MKVAE+L Q GFISYPRTETD FS  TDL+
Sbjct: 307 HPLSTIELEKRASRYFRMSSEQTMKVAEDLYQNGFISYPRTETDCFSDKTDLR 359



 Score = 28.5 bits (62), Expect(2) = 3e-68
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +1

Query: 70  EIHHAAQNLKVPDQRLVDAVDARQ 141
           EIH + Q L  P+Q   DAVD RQ
Sbjct: 163 EIHQSVQTLVQPNQLFSDAVDVRQ 186


>ref|XP_003558748.1| PREDICTED: DNA topoisomerase 3-alpha [Brachypodium distachyon]
          Length = 924

 Score =  255 bits (652), Expect(2) = 4e-68
 Identities = 122/172 (70%), Positives = 143/172 (83%), Gaps = 1/172 (0%)
 Frame = +3

Query: 183 EIDLRIGASFTRLQIMLLRDAFLLPFTDDERKLILSYGPCQFPTLGFVVERYWEIQAHVP 362
           EIDLRIGASFTR Q MLL+DAF+L  + +ER ++LSYGPCQFPTLGF+VER+WEIQAH P
Sbjct: 186 EIDLRIGASFTRFQTMLLKDAFVLDVSGEERNMVLSYGPCQFPTLGFIVERFWEIQAHEP 245

Query: 363 EEFWTINCSHTSDDGTSTFNWIHGRLFDYAAA-VIYELCVNEPTATVTKITHEEKRKYPH 539
           EEFWTINCSHTSD+GT++F WI G LFDY++A VIYE+CV EP ATV  + ++EK KYP 
Sbjct: 246 EEFWTINCSHTSDEGTASFGWIRGHLFDYSSAIVIYEMCVQEPMATVQNVRNQEKLKYPP 305

Query: 540 YPLSTVELQKRGS*YFGLTPGNIMKVAEELCQIGFISYPRTETDAFSPNTDL 695
           YPLST+ELQKR S    ++  + MKVAEEL Q GFISYPRTETD FSPNTDL
Sbjct: 306 YPLSTLELQKRASRCCRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNTDL 357



 Score = 30.4 bits (67), Expect(2) = 4e-68
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +1

Query: 70  EIHHAAQNLKVPDQRLVDAVDARQ 141
           EIH A Q+L  P++   DAVDARQ
Sbjct: 162 EIHEAVQHLGRPNKLFADAVDARQ 185


>ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum tuberosum]
          Length = 915

 Score =  257 bits (657), Expect(2) = 4e-68
 Identities = 121/173 (69%), Positives = 141/173 (81%), Gaps = 1/173 (0%)
 Frame = +3

Query: 183 EIDLRIGASFTRLQIMLLRDAFLLPFTDDERKLILSYGPCQFPTLGFVVERYWEIQAHVP 362
           EIDLRIGASFTR Q MLLR AF+L F  D+R ++LSYGPCQFPTLGFVVERYWEIQAH P
Sbjct: 187 EIDLRIGASFTRFQTMLLRGAFVLDFATDDRNIVLSYGPCQFPTLGFVVERYWEIQAHEP 246

Query: 363 EEFWTINCSHTSDDGTSTFNWIHGRLFDYAAAV-IYELCVNEPTATVTKITHEEKRKYPH 539
           EEFWTINC+H SD+GT+TFNW+ G LFDY   V IYE+C+ EP ATVTK+  +EK KYP 
Sbjct: 247 EEFWTINCTHNSDEGTATFNWMRGHLFDYTCGVTIYEMCIQEPIATVTKVKQQEKLKYPP 306

Query: 540 YPLSTVELQKRGS*YFGLTPGNIMKVAEELCQIGFISYPRTETDAFSPNTDLQ 698
           +PLST+EL+KR S YF ++    MKVAE+L Q GFISYPRTETD+FS  TDL+
Sbjct: 307 HPLSTIELEKRASRYFRMSSEQTMKVAEDLYQNGFISYPRTETDSFSEKTDLR 359



 Score = 28.5 bits (62), Expect(2) = 4e-68
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +1

Query: 70  EIHHAAQNLKVPDQRLVDAVDARQ 141
           EIH + Q L  P+Q   DAVD RQ
Sbjct: 163 EIHQSVQTLVQPNQLFSDAVDVRQ 186