BLASTX nr result

ID: Ephedra27_contig00018549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00018549
         (473 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317036.2| hypothetical protein POPTR_0011s15100g, part...    55   7e-06
ref|XP_001775042.1| predicted protein [Physcomitrella patens] gi...    55   7e-06
gb|EMJ01448.1| hypothetical protein PRUPE_ppa015164mg [Prunus pe...    55   1e-05
ref|XP_002277530.1| PREDICTED: RING-H2 finger protein ATL79 [Vit...    55   1e-05
ref|XP_003616665.1| RING finger protein [Medicago truncatula] gi...    55   1e-05

>ref|XP_002317036.2| hypothetical protein POPTR_0011s15100g, partial [Populus
           trichocarpa] gi|550328435|gb|EEE97648.2| hypothetical
           protein POPTR_0011s15100g, partial [Populus trichocarpa]
          Length = 258

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/60 (41%), Positives = 37/60 (61%)
 Frame = -2

Query: 388 GAERECCICLTEFVQSENIRVTSGCWNVYHGDCIDKWISFSHVSLPLVQLLLYTSQMNLP 209
           GAE +C ICL+EFV+ E IRV   C + +H  C++KW++ SH S P  +     S ++ P
Sbjct: 122 GAEADCAICLSEFVEGEGIRVLGRCNHGFHVHCVEKWLA-SHSSCPTCRCSCLASSLSSP 180


>ref|XP_001775042.1| predicted protein [Physcomitrella patens]
           gi|162673629|gb|EDQ60149.1| predicted protein
           [Physcomitrella patens]
          Length = 127

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/71 (36%), Positives = 41/71 (57%)
 Frame = -2

Query: 445 IEILNIFKCQDNLTEHGDEGAERECCICLTEFVQSENIRVTSGCWNVYHGDCIDKWISFS 266
           ++ L +  C+D      DE  +REC +CLTEF   +N+R+   C +++H +CID W   S
Sbjct: 63  VDALPLIHCKDL-----DEKDDRECPVCLTEFEPEDNLRLLPACKHIFHQECIDAWFD-S 116

Query: 265 HVSLPLVQLLL 233
           H + PL +  L
Sbjct: 117 HSTCPLCRASL 127


>gb|EMJ01448.1| hypothetical protein PRUPE_ppa015164mg [Prunus persica]
          Length = 160

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 22/57 (38%), Positives = 34/57 (59%)
 Frame = -2

Query: 397 GDEGAERECCICLTEFVQSENIRVTSGCWNVYHGDCIDKWISFSHVSLPLVQLLLYT 227
           G E  E  C ICL EF + + +   S C +V+H DCI++WI  SH + P+ + L ++
Sbjct: 78  GQEALEETCSICLVEFEKEDVVSQLSKCGHVFHMDCIERWIESSHFTCPICRSLFFS 134


>ref|XP_002277530.1| PREDICTED: RING-H2 finger protein ATL79 [Vitis vinifera]
          Length = 187

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/60 (45%), Positives = 36/60 (60%)
 Frame = -2

Query: 388 GAERECCICLTEFVQSENIRVTSGCWNVYHGDCIDKWISFSHVSLPLVQLLLYTSQMNLP 209
           GAE EC ICL+EFV+ E IRV   C + +H  CI +W+S SH S P  +     +  +LP
Sbjct: 118 GAEAECAICLSEFVEGEGIRVMGQCKHGFHVQCIQEWLS-SHSSCPTCRGSCLPTSAHLP 176


>ref|XP_003616665.1| RING finger protein [Medicago truncatula]
           gi|355518000|gb|AES99623.1| RING finger protein
           [Medicago truncatula]
          Length = 170

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/80 (37%), Positives = 44/80 (55%)
 Frame = -2

Query: 472 KSASLSAT*IEILNIFKCQDNLTEHGDEGAERECCICLTEFVQSENIRVTSGCWNVYHGD 293
           +S  L+A  I+ L I   Q N + H  E  E ECCICL+ F   E ++V   C + +H +
Sbjct: 72  QSEGLNADAIKKLPIILHQSNTSNHALE--ETECCICLSTFRDGEKVKVLPSCDHYFHCE 129

Query: 292 CIDKWISFSHVSLPLVQLLL 233
           C+D W+  +H S PL +  L
Sbjct: 130 CVDAWL-VNHSSCPLCRASL 148


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