BLASTX nr result

ID: Ephedra27_contig00018542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00018542
         (440 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37271.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|XP_002265647.1| PREDICTED: F-box/kelch-repeat protein At3g24...    59   9e-07
emb|CAN65567.1| hypothetical protein VITISV_001761 [Vitis vinifera]    59   9e-07

>emb|CBI37271.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
 Frame = -2

Query: 295 IQSGLSNYYFLSICFEVVFLN---MSDDISEEVSSNAQWSRLDPHSADTVLTRLPITTLA 125
           IQ+   N+  L I F +V++    MSD       S+  W+ L       +L+ LPI ++ 
Sbjct: 2   IQTFFCNWKLLIIKF-IVWIRQPRMSD-------SHLDWTLLGSDLTALILSHLPIASII 53

Query: 124 RCGLVCRDWKSLLSNPSFASYALHSKPRPPWFFLFGQSNVV 2
           R   VC+ W+S++S P F++    S    PWFFL GQSN++
Sbjct: 54  RASAVCKLWRSIISTPFFSNLLSTSAHHHPWFFLLGQSNIL 94


>ref|XP_002265647.1| PREDICTED: F-box/kelch-repeat protein At3g24760-like [Vitis
           vinifera]
          Length = 386

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/67 (37%), Positives = 39/67 (58%)
 Frame = -2

Query: 202 SNAQWSRLDPHSADTVLTRLPITTLARCGLVCRDWKSLLSNPSFASYALHSKPRPPWFFL 23
           S+  W+ L       +L+ LPI ++ R   VC+ W+S++S P F++    S    PWFFL
Sbjct: 4   SHLDWTLLGSDLTALILSHLPIASIIRASAVCKLWRSIISTPFFSNLLSTSAHHHPWFFL 63

Query: 22  FGQSNVV 2
            GQSN++
Sbjct: 64  LGQSNIL 70


>emb|CAN65567.1| hypothetical protein VITISV_001761 [Vitis vinifera]
          Length = 386

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/67 (37%), Positives = 39/67 (58%)
 Frame = -2

Query: 202 SNAQWSRLDPHSADTVLTRLPITTLARCGLVCRDWKSLLSNPSFASYALHSKPRPPWFFL 23
           S+  W+ L       +L+ LPI ++ R   VC+ W+S++S P F++    S    PWFFL
Sbjct: 4   SHLDWTLLGSDLTALILSHLPIASIIRASAVCKLWRSIISTPFFSNLLSTSAHHHPWFFL 63

Query: 22  FGQSNVV 2
            GQSN++
Sbjct: 64  LGQSNIL 70


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