BLASTX nr result

ID: Ephedra27_contig00018377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00018377
         (550 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC96080.1| alpha-expansin precursor [Nicotiana tabacum]            61   2e-07
ref|XP_006355116.1| PREDICTED: expansin-A15-like [Solanum tubero...    57   2e-06
ref|XP_004238818.1| PREDICTED: expansin-A1 [Solanum lycopersicum]      57   2e-06
emb|CAD90261.1| expansin12 [Solanum lycopersicum]                      57   2e-06
gb|AAW28563.1| Alpha-expansin 1 precursor , putative [Solanum de...    57   2e-06
gb|AAU90318.1| Alpha-expansin 1 precursor , putative [Solanum de...    57   2e-06
ref|XP_004138914.1| PREDICTED: expansin-A1-like [Cucumis sativus...    57   4e-06

>gb|AAC96080.1| alpha-expansin precursor [Nicotiana tabacum]
          Length = 249

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 46/126 (36%), Positives = 62/126 (49%), Gaps = 9/126 (7%)
 Frame = -3

Query: 521 HFALSANAFFLIATQQSKXXXXXXXXXXXXXXXXXRFTISGDDKETEVLITNLGGGGNVD 342
           HF LS   F  IA  ++                  RFTI+G      VL+TN+GGGG+V 
Sbjct: 123 HFDLSQPIFQHIAQYKAGIVPVAYRRVPCRRRGGIRFTINGHAYFNLVLVTNVGGGGDVH 182

Query: 341 AVRATWPGVTGWKEMTRSSTKGGQVW---------TITFELLTGDGRQLIASAVIP*IWA 189
           AV A     TGW+ M+R+    GQ W         T++F++ TGDGR LI+  V P  W+
Sbjct: 183 AV-AVKGSRTGWQPMSRN---WGQNWQNNNYLNGQTLSFKVTTGDGRSLISYNVAPAHWS 238

Query: 188 SLHQFT 171
             H +T
Sbjct: 239 FGHTYT 244


>ref|XP_006355116.1| PREDICTED: expansin-A15-like [Solanum tuberosum]
          Length = 249

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 9/126 (7%)
 Frame = -3

Query: 521 HFALSANAFFLIATQQSKXXXXXXXXXXXXXXXXXRFTISGDDKETEVLITNLGGGGNVD 342
           HF LS   F  IA  ++                  RFTI+G      VL+TN+GGGG+V 
Sbjct: 123 HFDLSQPIFQHIAHYKAGIVPVAYRRVPCRRRGGIRFTINGHSYFNLVLVTNVGGGGDVH 182

Query: 341 AVRATWPGVTGWKEMTRSSTKGGQVW---------TITFELLTGDGRQLIASAVIP*IWA 189
           +V A     TGW+ M+R+    GQ W         T++F++ TGDGR LI+  V P  W+
Sbjct: 183 SV-AVKGSRTGWQPMSRN---WGQNWQNNNNLNGQTLSFKVTTGDGRSLISYNVAPAHWS 238

Query: 188 SLHQFT 171
               +T
Sbjct: 239 FGQTYT 244


>ref|XP_004238818.1| PREDICTED: expansin-A1 [Solanum lycopersicum]
          Length = 249

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 9/126 (7%)
 Frame = -3

Query: 521 HFALSANAFFLIATQQSKXXXXXXXXXXXXXXXXXRFTISGDDKETEVLITNLGGGGNVD 342
           HF LS   F  IA  ++                  RFTI+G      VL+TN+GGGG+V 
Sbjct: 123 HFDLSQPIFQHIAHYKAGIVPVAYRRVPCRRRGGIRFTINGHSYFNLVLVTNVGGGGDVH 182

Query: 341 AVRATWPGVTGWKEMTRSSTKGGQVW---------TITFELLTGDGRQLIASAVIP*IWA 189
           +V A     TGW+ M+R+    GQ W         T++F++ TGDGR LI+  V P  W+
Sbjct: 183 SV-AVKGSRTGWQPMSRN---WGQNWQNNNNLNGQTLSFKVTTGDGRSLISYNVAPAHWS 238

Query: 188 SLHQFT 171
               +T
Sbjct: 239 FGQTYT 244


>emb|CAD90261.1| expansin12 [Solanum lycopersicum]
          Length = 233

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 9/126 (7%)
 Frame = -3

Query: 521 HFALSANAFFLIATQQSKXXXXXXXXXXXXXXXXXRFTISGDDKETEVLITNLGGGGNVD 342
           HF LS   F  IA  ++                  RFTI+G      VL+TN+GGGG+V 
Sbjct: 107 HFDLSQPIFQHIAHYKAGIVPVAYRRVPCRRRGGIRFTINGHSYFNLVLVTNVGGGGDVH 166

Query: 341 AVRATWPGVTGWKEMTRSSTKGGQVW---------TITFELLTGDGRQLIASAVIP*IWA 189
           +V A     TGW+ M+R+    GQ W         T++F++ TGDGR LI+  V P  W+
Sbjct: 167 SV-AVKGSRTGWQPMSRN---WGQNWQNNNDLNGQTLSFKVTTGDGRSLISYNVAPAHWS 222

Query: 188 SLHQFT 171
               +T
Sbjct: 223 FGQTYT 228


>gb|AAW28563.1| Alpha-expansin 1 precursor , putative [Solanum demissum]
          Length = 249

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 9/126 (7%)
 Frame = -3

Query: 521 HFALSANAFFLIATQQSKXXXXXXXXXXXXXXXXXRFTISGDDKETEVLITNLGGGGNVD 342
           HF LS   F  IA  ++                  RFTI+G      VL+TN+GGGG+V 
Sbjct: 123 HFDLSQPIFQHIAHYKAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLVTNVGGGGDVH 182

Query: 341 AVRATWPGVTGWKEMTRSSTKGGQVW---------TITFELLTGDGRQLIASAVIP*IWA 189
           +V A     TGW+ M+R+    GQ W         T++F++ TGDGR LI+  V P  W+
Sbjct: 183 SV-AVKGSRTGWQPMSRN---WGQNWQNNNNLNGQTLSFKVTTGDGRSLISYNVAPAHWS 238

Query: 188 SLHQFT 171
               +T
Sbjct: 239 FGQTYT 244


>gb|AAU90318.1| Alpha-expansin 1 precursor , putative [Solanum demissum]
          Length = 249

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 9/126 (7%)
 Frame = -3

Query: 521 HFALSANAFFLIATQQSKXXXXXXXXXXXXXXXXXRFTISGDDKETEVLITNLGGGGNVD 342
           HF LS   F  IA  ++                  RFTI+G      VL+TN+GGGG+V 
Sbjct: 123 HFDLSQPIFQHIAHYKAGIVPVAYRRVPCRRRGGIRFTINGHSYFNLVLVTNVGGGGDVH 182

Query: 341 AVRATWPGVTGWKEMTRSSTKGGQVW---------TITFELLTGDGRQLIASAVIP*IWA 189
           +V A     TGW+ M+R+    GQ W         T++F++ TGDGR LI+  V P  W+
Sbjct: 183 SV-AVKGSRTGWQPMSRN---WGQNWQSNNNLNGQTLSFKVTTGDGRSLISYNVAPAHWS 238

Query: 188 SLHQFT 171
               +T
Sbjct: 239 FGQTYT 244


>ref|XP_004138914.1| PREDICTED: expansin-A1-like [Cucumis sativus]
           gi|449526507|ref|XP_004170255.1| PREDICTED:
           expansin-A1-like [Cucumis sativus]
          Length = 244

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 44/128 (34%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
 Frame = -3

Query: 521 HFALSANAFFLIATQQSKXXXXXXXXXXXXXXXXXRFTISGDDKETEVLITNLGGGGNVD 342
           HF LS + F  IA   +                  RFTI G      VLITN+GG G+V 
Sbjct: 118 HFDLSQSVFLRIAQYHAGIVPVLYRRAPCKRKGGVRFTIKGHSYFNLVLITNVGGAGDVH 177

Query: 341 AVRATWPGVTGWKEMTRSSTKGGQVW---------TITFELLTGDGRQLIASAVIP*IWA 189
           AV    P  +GW+ M+R+    GQ W          ++F+L T DGR LI++ V P  W+
Sbjct: 178 AVSVKGPR-SGWQPMSRN---WGQNWQSHNYLDAQPLSFKLTTSDGRTLISNNVAPAGWS 233

Query: 188 SLHQFTPS 165
               F  S
Sbjct: 234 FGQTFAGS 241


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