BLASTX nr result
ID: Ephedra27_contig00018275
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00018275
(759 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Sela... 333 5e-89
ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela... 333 5e-89
ref|XP_002951663.1| hypothetical protein VOLCADRAFT_81566 [Volvo... 305 1e-80
ref|XP_002502032.1| predicted protein [Micromonas sp. RCC299] gi... 298 1e-78
ref|XP_003057499.1| predicted protein [Micromonas pusilla CCMP15... 296 7e-78
ref|XP_003075225.1| RNA polymerase I, large subunit (ISS) [Ostre... 294 2e-77
ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi... 294 3e-77
ref|XP_001416093.1| predicted protein [Ostreococcus lucimarinus ... 288 1e-75
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 277 3e-72
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 277 3e-72
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 276 4e-72
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 276 4e-72
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao] 273 4e-71
gb|EGO27147.1| hypothetical protein SERLADRAFT_446372 [Serpula l... 270 5e-70
gb|EGO01485.1| hypothetical protein SERLA73DRAFT_103293 [Serpula... 270 5e-70
emb|CCM03577.1| predicted protein [Fibroporia radiculosa] 269 9e-70
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu... 268 1e-69
ref|XP_003026267.1| hypothetical protein SCHCODRAFT_71335 [Schiz... 268 1e-69
gb|EFA78358.1| RNA polymerase III [Polysphondylium pallidum PN500] 268 1e-69
gb|EJD42702.1| beta and beta-prime subunits of DNA dependent RNA... 268 2e-69
>ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Selaginella moellendorffii]
gi|300158014|gb|EFJ24638.1| hypothetical protein
SELMODRAFT_442419 [Selaginella moellendorffii]
Length = 1348
Score = 333 bits (853), Expect = 5e-89
Identities = 169/254 (66%), Positives = 200/254 (78%), Gaps = 2/254 (0%)
Frame = +3
Query: 3 CPRCGDYNGTVKKLTSTLRITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDL 182
CPRCGD NG VKKL STL+I H+KY+K + E +F +AV+ +KE+K ++ IQ+DL
Sbjct: 175 CPRCGDINGVVKKLGSTLKIIHDKYAKNYEAFEEMAHKFDDAVKVNKEMKGYMKNIQEDL 234
Query: 183 TPLKVLNLFTKMVDEDCDVLYLHGRPEKLIVTHMAVPPVVIRPSVITDG--GSNEDDITM 356
TPLKVL LF K++ EDC VL L RPE+LIV HM VPPV IRPSV D GSNEDD+T+
Sbjct: 235 TPLKVLGLFEKIIGEDCVVLDLVDRPEQLIVQHMPVPPVAIRPSVEMDAAVGSNEDDVTI 294
Query: 357 KLLDIIKTNVRLHTELEAGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRG 536
KL+ II+ N ++ LE+G I CME WD LQ+QV +YINS+LPGLP +M GKP+RG
Sbjct: 295 KLMHIIEQNNQIRACLESGLSIAKCMEIWDFLQIQVAMYINSELPGLPPNM-QTGKPLRG 353
Query: 537 FVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYN 716
FVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKV+EVAVP+LMA LTYPEKVS +N
Sbjct: 354 FVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVSEVAVPILMAQTLTYPEKVSAHN 413
Query: 717 IEKLRQRVSNGPQK 758
IEKLRQRV NG +K
Sbjct: 414 IEKLRQRVINGKEK 427
>ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
gi|300146624|gb|EFJ13293.1| hypothetical protein
SELMODRAFT_446351 [Selaginella moellendorffii]
Length = 1393
Score = 333 bits (853), Expect = 5e-89
Identities = 169/254 (66%), Positives = 200/254 (78%), Gaps = 2/254 (0%)
Frame = +3
Query: 3 CPRCGDYNGTVKKLTSTLRITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDL 182
CPRCGD NG VKKL STL+I H+KY+K + E +F +AV+ +KE+K ++ IQ+DL
Sbjct: 175 CPRCGDINGVVKKLGSTLKIIHDKYAKNYEAFEEMAHKFDDAVKVNKEMKGYMKNIQEDL 234
Query: 183 TPLKVLNLFTKMVDEDCDVLYLHGRPEKLIVTHMAVPPVVIRPSVITDG--GSNEDDITM 356
TPLKVL LF K++ EDC VL L RPE+LIV HM VPPV IRPSV D GSNEDD+T+
Sbjct: 235 TPLKVLGLFEKIIGEDCVVLDLVDRPEQLIVQHMPVPPVAIRPSVEMDAAVGSNEDDVTI 294
Query: 357 KLLDIIKTNVRLHTELEAGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRG 536
KL+ II+ N ++ LE+G I CME WD LQ+QV +YINS+LPGLP +M GKP+RG
Sbjct: 295 KLMHIIEQNNQIRACLESGLSIAKCMEIWDFLQIQVAMYINSELPGLPPNM-QTGKPLRG 353
Query: 537 FVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYN 716
FVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKV+EVAVP+LMA LTYPEKVS +N
Sbjct: 354 FVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVSEVAVPILMAQTLTYPEKVSAHN 413
Query: 717 IEKLRQRVSNGPQK 758
IEKLRQRV NG +K
Sbjct: 414 IEKLRQRVINGKEK 427
>ref|XP_002951663.1| hypothetical protein VOLCADRAFT_81566 [Volvox carteri f.
nagariensis] gi|300262911|gb|EFJ47114.1| hypothetical
protein VOLCADRAFT_81566 [Volvox carteri f. nagariensis]
Length = 1365
Score = 305 bits (781), Expect = 1e-80
Identities = 153/249 (61%), Positives = 186/249 (74%)
Frame = +3
Query: 3 CPRCGDYNGTVKKLTSTLRITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDL 182
CP CG+YN TVKK T L+I HE+Y+K E + A+A++ + +LK L+R+ DDL
Sbjct: 112 CPHCGEYNATVKKATGVLKIIHERYAKNESL--------ADAIKYNDQLKPHLHRMADDL 163
Query: 183 TPLKVLNLFTKMVDEDCDVLYLHGRPEKLIVTHMAVPPVVIRPSVITDGGSNEDDITMKL 362
PL+V LF + DED D+L + GRPE L+ TH+AVPPV IRPSV DG SNEDDITMKL
Sbjct: 164 HPLRVRALFENIPDEDLDLLDIQGRPEDLVTTHLAVPPVAIRPSVEMDGSSNEDDITMKL 223
Query: 363 LDIIKTNVRLHTELEAGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGFV 542
+ II N L LE G I + ME WD LQVQ + INSDLPGLP+ M G+P+RGFV
Sbjct: 224 MQIIDVNNVLRQGLEKGLPINNLMENWDFLQVQCAMLINSDLPGLPAQMQMPGRPLRGFV 283
Query: 543 QRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNIE 722
QRLKGKQGRFRGNLSGKRVDF+GRTVISPDPNL++ +V VP MA+VLTYPE+V+R+NI+
Sbjct: 284 QRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLQIFQVCVPQHMAVVLTYPERVTRHNID 343
Query: 723 KLRQRVSNG 749
KLRQRV NG
Sbjct: 344 KLRQRVLNG 352
>ref|XP_002502032.1| predicted protein [Micromonas sp. RCC299]
gi|226517297|gb|ACO63290.1| predicted protein
[Micromonas sp. RCC299]
Length = 1479
Score = 298 bits (763), Expect = 1e-78
Identities = 149/254 (58%), Positives = 189/254 (74%), Gaps = 2/254 (0%)
Frame = +3
Query: 3 CPRCGDYNGTVKKLTSTLRITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDL 182
CP CG NG VK+ ++L+I HEKYSK ++ Y+ EF EAV+ + +LKA L R+QDDL
Sbjct: 177 CPSCGAANGAVKRTGASLKIVHEKYSKNPELMEAYVKEFEEAVKHNDQLKANLARVQDDL 236
Query: 183 TPLKVLNLFTKMVDEDCDVLYLHGRPEKLIVTHMAVPPVVIRPSVITDG--GSNEDDITM 356
P++V ++ +K+ DC++L + RPE LI+TH+ VPPV IRPSV +G GSNEDDITM
Sbjct: 237 NPIRVESILSKISPMDCELLDVADRPEHLILTHLPVPPVCIRPSVEMEGQAGSNEDDITM 296
Query: 357 KLLDIIKTNVRLHTELEAGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRG 536
KL+ II+ N L LE G I + ME WD LQ+Q +YINS+LPGL + GKP+RG
Sbjct: 297 KLIQIIEVNNVLRQGLEKGLAINNLMENWDFLQIQCAMYINSELPGLSAQYQGPGKPLRG 356
Query: 537 FVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYN 716
FVQRLKGKQGRFRGNLSGKRVDF+GRTVISPDPNL++ EV VPM +A ++TYPE VSR+N
Sbjct: 357 FVQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLRIDEVGVPMHIAKMMTYPEVVSRHN 416
Query: 717 IEKLRQRVSNGPQK 758
IE +R+RV NG K
Sbjct: 417 IEMIRERVRNGMNK 430
>ref|XP_003057499.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461851|gb|EEH59144.1| predicted protein
[Micromonas pusilla CCMP1545]
Length = 1591
Score = 296 bits (757), Expect = 7e-78
Identities = 147/254 (57%), Positives = 188/254 (74%), Gaps = 2/254 (0%)
Frame = +3
Query: 3 CPRCGDYNGTVKKLTSTLRITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDL 182
C CG NG VK+ +L+I HEKYSK ++ EYL +F EAV+ + +LK L+R+QDDL
Sbjct: 177 CYYCGAANGVVKRAGQSLKIVHEKYSKNPELMEEYLKQFEEAVKFNDQLKQNLSRVQDDL 236
Query: 183 TPLKVLNLFTKMVDEDCDVLYLHGRPEKLIVTHMAVPPVVIRPSVITDG--GSNEDDITM 356
P++V+++F ++ DC++L + RPE LI+TH+ VPPV IRPSV DG GSNEDDITM
Sbjct: 237 NPIRVISIFRRISPMDCELLDIADRPEHLILTHLPVPPVCIRPSVEMDGVAGSNEDDITM 296
Query: 357 KLLDIIKTNVRLHTELEAGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRG 536
KL+ II+ N L LE G I + ME WD LQVQ+ +Y NS+LPGL GKP+RG
Sbjct: 297 KLIQIIEVNNVLRQGLEKGLAIANLMENWDFLQVQIAMYFNSELPGLSLQYQGPGKPLRG 356
Query: 537 FVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYN 716
FVQRLKGKQGRFRGNLSGKRVDF+GRTVISPDPNL++ EV VPM +A ++TYPE +S++N
Sbjct: 357 FVQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLRIDEVGVPMHIAKLMTYPEVISKHN 416
Query: 717 IEKLRQRVSNGPQK 758
IE +R+RV NG K
Sbjct: 417 IEHIRERVRNGMNK 430
>ref|XP_003075225.1| RNA polymerase I, large subunit (ISS) [Ostreococcus tauri]
gi|116061779|emb|CAL52497.1| RNA polymerase I, large
subunit (ISS) [Ostreococcus tauri]
Length = 1406
Score = 294 bits (753), Expect = 2e-77
Identities = 143/251 (56%), Positives = 184/251 (73%), Gaps = 2/251 (0%)
Frame = +3
Query: 3 CPRCGDYNGTVKKLTSTLRITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDL 182
CP CGDYNG K+ TL+I HEKYSK + E+L EF A++ +++L+A L ++QDDL
Sbjct: 176 CPHCGDYNGVTKRAGQTLKIVHEKYSKNPALLEEFLKEFETALKYNEQLRASLPKVQDDL 235
Query: 183 TPLKVLNLFTKMVDEDCDVLYLHGRPEKLIVTHMAVPPVVIRPSVITDG--GSNEDDITM 356
P++VL++ ++ D+DC++L + RPE L++TH+ VPP IRPSV DG GSNEDDITM
Sbjct: 236 NPIRVLSILQRITDQDCELLDIADRPEHLLLTHLPVPPCCIRPSVEMDGVSGSNEDDITM 295
Query: 357 KLLDIIKTNVRLHTELEAGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRG 536
KL+ II+ N L LE G I + ME WD LQ+Q +YINS+LPGL GKP+RG
Sbjct: 296 KLIQIIEVNNVLRQGLEKGLTINNLMENWDFLQIQCAMYINSELPGLSLQYQGPGKPLRG 355
Query: 537 FVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYN 716
FVQRLKGKQGRFRGNLSGKRVDF+ RTVISPDPNL + EV +P+ +A +TYPE V+R+N
Sbjct: 356 FVQRLKGKQGRFRGNLSGKRVDFSARTVISPDPNLGIDEVGIPIYIAKTMTYPEVVNRHN 415
Query: 717 IEKLRQRVSNG 749
I LR+RV NG
Sbjct: 416 IAMLRERVRNG 426
>ref|XP_001757221.1| predicted protein [Physcomitrella patens]
gi|162691719|gb|EDQ78080.1| predicted protein
[Physcomitrella patens]
Length = 1397
Score = 294 bits (752), Expect = 3e-77
Identities = 152/255 (59%), Positives = 185/255 (72%), Gaps = 3/255 (1%)
Frame = +3
Query: 3 CPRCGDYNGTVKKLTST-LRITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDD 179
C RCGDYNG VKK+ +++ H+KY KA D++ E + +A++ ELK +NR+ D+
Sbjct: 168 CTRCGDYNGVVKKMAQPPVKLIHDKYGKALDLKEEMIVSLEDAMKCKPELKNCINRVYDN 227
Query: 180 LTPLKVLNLFTKMVDEDCDVLYLHGRPEKLIVTHMAVPPVVIRPSVITDG--GSNEDDIT 353
L P++VL LF M+++DC+VL L RPEKLIVTH+ VPPV IRPSV + GSNEDDIT
Sbjct: 228 LDPMRVLQLFESMIEQDCEVLDLAERPEKLIVTHLIVPPVAIRPSVEMESAAGSNEDDIT 287
Query: 354 MKLLDIIKTNVRLHTELEAGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMR 533
++LL I+ N L T +E G ME W+LLQ QV INS+ P S GK R
Sbjct: 288 VRLLGILNCNNSLRTCVEQGLAAEKTMETWELLQSQVSQLINSETPVPRSEQPTSGKQPR 347
Query: 534 GFVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRY 713
GFVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLK+TEVAVP+LMA +LTYPEKVSRY
Sbjct: 348 GFVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKITEVAVPLLMAQLLTYPEKVSRY 407
Query: 714 NIEKLRQRVSNGPQK 758
NI+KLR R+ NG K
Sbjct: 408 NIDKLRGRIINGMTK 422
>ref|XP_001416093.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576317|gb|ABO94385.1| predicted protein
[Ostreococcus lucimarinus CCE9901]
Length = 1395
Score = 288 bits (738), Expect = 1e-75
Identities = 140/254 (55%), Positives = 183/254 (72%), Gaps = 2/254 (0%)
Frame = +3
Query: 3 CPRCGDYNGTVKKLTSTLRITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDL 182
CP CGDYNG K+ TL+I HEKYSK + E++ EF A++ +++L+A L ++QDDL
Sbjct: 175 CPHCGDYNGVTKRAGQTLKIVHEKYSKNPALLEEFMKEFETALKYNEQLRASLPKVQDDL 234
Query: 183 TPLKVLNLFTKMVDEDCDVLYLHGRPEKLIVTHMAVPPVVIRPSVITDG--GSNEDDITM 356
P++VL + ++ DC++L + RPE L++TH+ VPP IRPSV DG GSNEDDITM
Sbjct: 235 NPIRVLGILQRVTSADCELLDIADRPEHLLLTHLPVPPCCIRPSVEMDGVSGSNEDDITM 294
Query: 357 KLLDIIKTNVRLHTELEAGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRG 536
KL+ II+ N L LE G + + ME WD LQ+Q +YINS+LPGL GKP+RG
Sbjct: 295 KLIQIIEVNNVLRQGLEKGLAVNNMMENWDFLQIQCAMYINSELPGLSLQYQGPGKPLRG 354
Query: 537 FVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYN 716
FVQRLKGKQGRFRGNLSGKRVDF+ RTVISPDPNL++ EV VP+ +A +TYPE V+++N
Sbjct: 355 FVQRLKGKQGRFRGNLSGKRVDFSARTVISPDPNLRIDEVGVPIHIAKTMTYPEVVNKHN 414
Query: 717 IEKLRQRVSNGPQK 758
+ LR+RV NG K
Sbjct: 415 MVMLRERVRNGMAK 428
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 277 bits (708), Expect = 3e-72
Identities = 143/254 (56%), Positives = 184/254 (72%), Gaps = 2/254 (0%)
Frame = +3
Query: 3 CPRCGDYNGTVKKLTSTLRITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDL 182
C RCG NG VKK S L I H++ A+ L E + A+ KE KA + + D L
Sbjct: 166 CSRCGYMNGIVKKAVSVLGIIHDRSKIADGS----LEECSSAISHTKESKASFS-VVDIL 220
Query: 183 TPLKVLNLFTKMVDEDCDVLYLHGRPEKLIVTHMAVPPVVIRPSVITDGG--SNEDDITM 356
P+KVL+LF +M+DEDCD+L L RPEKL++T++ VPP+ IRPSV DGG SNE+D+T
Sbjct: 221 NPVKVLSLFKRMMDEDCDLLNLAERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTE 280
Query: 357 KLLDIIKTNVRLHTELEAGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRG 536
+L II+ N LH EL+ G + C+ WD LQ++V YINSD+ G+P +M +P+ G
Sbjct: 281 RLKRIIQANASLHQELQDTGSTSKCLAGWDYLQIEVAQYINSDVRGVPLAM-QAARPLSG 339
Query: 537 FVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYN 716
FVQRLKGKQGRFRGNLSGKRV++TGRTVISPDPNLK+TEVA+P+LMA +L+YPE+VS +N
Sbjct: 340 FVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHN 399
Query: 717 IEKLRQRVSNGPQK 758
IEKLRQ + NGP K
Sbjct: 400 IEKLRQCILNGPFK 413
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 277 bits (708), Expect = 3e-72
Identities = 143/254 (56%), Positives = 184/254 (72%), Gaps = 2/254 (0%)
Frame = +3
Query: 3 CPRCGDYNGTVKKLTSTLRITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDL 182
C RCG NG VKK S L I H++ A+ L E + A+ KE KA + + D L
Sbjct: 166 CSRCGYMNGIVKKAVSVLGIIHDRSKIADGS----LEECSSAISHTKESKASFS-VVDIL 220
Query: 183 TPLKVLNLFTKMVDEDCDVLYLHGRPEKLIVTHMAVPPVVIRPSVITDGG--SNEDDITM 356
P+KVL+LF +M+DEDCD+L L RPEKL++T++ VPP+ IRPSV DGG SNE+D+T
Sbjct: 221 NPVKVLSLFKRMMDEDCDLLNLAERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTE 280
Query: 357 KLLDIIKTNVRLHTELEAGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRG 536
+L II+ N LH EL+ G + C+ WD LQ++V YINSD+ G+P +M +P+ G
Sbjct: 281 RLKRIIQANASLHQELQDTGSTSKCLAGWDYLQIEVAQYINSDVRGVPLAM-QAARPLSG 339
Query: 537 FVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYN 716
FVQRLKGKQGRFRGNLSGKRV++TGRTVISPDPNLK+TEVA+P+LMA +L+YPE+VS +N
Sbjct: 340 FVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHN 399
Query: 717 IEKLRQRVSNGPQK 758
IEKLRQ + NGP K
Sbjct: 400 IEKLRQCILNGPFK 413
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Citrus sinensis]
gi|568870034|ref|XP_006488217.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc1-like isoform X2 [Citrus
sinensis]
Length = 1404
Score = 276 bits (707), Expect = 4e-72
Identities = 148/253 (58%), Positives = 180/253 (71%), Gaps = 1/253 (0%)
Frame = +3
Query: 3 CPRCGDYNGTVKKLTSTLRITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDL 182
CPRCG NG VKK + L I H++ SK +E L EFA A+ KE KA +N L
Sbjct: 171 CPRCGYINGMVKKAVAVLGIIHDR-SKV----TESLQEFASAITHTKESKAAVNVATYIL 225
Query: 183 TPLKVLNLFTKMVDEDCDVLYLHGRPEKLIVTHMAVPPVVIRPSVITDGG-SNEDDITMK 359
P+ VL LF +M D DC+VLYL RPEKLI+T++AVPP+ IRPSVI DG SNE+DIT +
Sbjct: 226 NPVNVLFLFKRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDGSQSNENDITER 285
Query: 360 LLDIIKTNVRLHTELEAGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGF 539
L II+TN L EL + W+ LQV+V YINSD+ G+P SM +P+ GF
Sbjct: 286 LKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSM-QVARPLSGF 344
Query: 540 VQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNI 719
VQRLKGKQGRFRGNLSGKRV++TGRTVISPDPNLK+TEVA+P+ MA +LTYPE+VS +NI
Sbjct: 345 VQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNI 404
Query: 720 EKLRQRVSNGPQK 758
EKLRQ + NGP K
Sbjct: 405 EKLRQCIQNGPDK 417
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 276 bits (707), Expect = 4e-72
Identities = 148/253 (58%), Positives = 180/253 (71%), Gaps = 1/253 (0%)
Frame = +3
Query: 3 CPRCGDYNGTVKKLTSTLRITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDL 182
CPRCG NG VKK + L I H++ SK +E L EFA A+ KE KA +N L
Sbjct: 186 CPRCGYINGMVKKAVAVLGIIHDR-SKV----TESLQEFASAITHTKESKAAVNVATYIL 240
Query: 183 TPLKVLNLFTKMVDEDCDVLYLHGRPEKLIVTHMAVPPVVIRPSVITDGG-SNEDDITMK 359
P+ VL LF +M D DC+VLYL RPEKLI+T++AVPP+ IRPSVI DG SNE+DIT +
Sbjct: 241 NPVNVLFLFKRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDGSQSNENDITER 300
Query: 360 LLDIIKTNVRLHTELEAGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGF 539
L II+TN L EL + W+ LQV+V YINSD+ G+P SM +P+ GF
Sbjct: 301 LKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSM-QVARPLSGF 359
Query: 540 VQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNI 719
VQRLKGKQGRFRGNLSGKRV++TGRTVISPDPNLK+TEVA+P+ MA +LTYPE+VS +NI
Sbjct: 360 VQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNI 419
Query: 720 EKLRQRVSNGPQK 758
EKLRQ + NGP K
Sbjct: 420 EKLRQCIQNGPDK 432
>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
Length = 1395
Score = 273 bits (699), Expect = 4e-71
Identities = 145/253 (57%), Positives = 177/253 (69%), Gaps = 1/253 (0%)
Frame = +3
Query: 3 CPRCGDYNGTVKKLTSTLRITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDL 182
C RCG NGTVKK + L I H++ I L EF A+ KE KA N L
Sbjct: 163 CWRCGYVNGTVKKAVAMLGIIHDR----SKINDNSLEEFRSAISHTKESKASFNVATYVL 218
Query: 183 TPLKVLNLFTKMVDEDCDVLYLHGRPEKLIVTHMAVPPVVIRPSVITDGG-SNEDDITMK 359
P+KVL+LF +M D DC++LYL RPEKLI+T++AVPP+ IRPSVI DG SNE+DIT +
Sbjct: 219 NPVKVLSLFKRMTDLDCELLYLSDRPEKLIITNIAVPPIPIRPSVIMDGSQSNENDITER 278
Query: 360 LLDIIKTNVRLHTELEAGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGF 539
L II+ N L EL C+ W++LQV+V YINSD+ G+P SM KP+ GF
Sbjct: 279 LKRIIQANASLRQELVETNAAFKCLGGWEMLQVEVAQYINSDVRGVPFSM-QVSKPLSGF 337
Query: 540 VQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNI 719
VQR+KGK GRFRGNLSGKRV++TGRTVISPDPNLK+TEVA+P+ MA +LTYPE+VS +NI
Sbjct: 338 VQRIKGKHGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVSNHNI 397
Query: 720 EKLRQRVSNGPQK 758
EKLRQ V NGP K
Sbjct: 398 EKLRQCVRNGPSK 410
>gb|EGO27147.1| hypothetical protein SERLADRAFT_446372 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1403
Score = 270 bits (689), Expect = 5e-70
Identities = 143/255 (56%), Positives = 180/255 (70%), Gaps = 6/255 (2%)
Frame = +3
Query: 3 CPRCGDYNGTVKKLTSTLRITHEKY--SKAEDIRSEYLSEFAEAVRQDKELKAFLNR-IQ 173
CP C NG VKK L+I H+K+ K + ++ FA AV KEL +LN+ +
Sbjct: 153 CPYCSATNGAVKK-AGALKIIHDKFRAKKTAEEMEKWKRTFAPAVEAQKELGMYLNKAVH 211
Query: 174 DDLTPLKVLNLFTKMVDEDCDVLYL---HGRPEKLIVTHMAVPPVVIRPSVITDGGSNED 344
+DL PLKVL+LF ++ DEDC++L L HGRPE+ I +++VPPV IRPSV DG SNED
Sbjct: 212 EDLNPLKVLDLFKRISDEDCELLGLRPAHGRPEEYIWQYISVPPVCIRPSVAQDGASNED 271
Query: 345 DITMKLLDIIKTNVRLHTELEAGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGK 524
D+T+KL +I+ TN + L G ME W+ LQ+ V +YINS+LPG+PS P K
Sbjct: 272 DLTVKLTEIVFTNALIKQGLSKGAPTAQFMEHWEFLQLSVAMYINSELPGVPSQ--PGQK 329
Query: 525 PMRGFVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKV 704
PMRGFVQRLKGKQGRFRGNLSGKRVDF+GRTVISPDPNL++ EVAVP +A VLTYPE+V
Sbjct: 330 PMRGFVQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLRIDEVAVPERVAKVLTYPERV 389
Query: 705 SRYNIEKLRQRVSNG 749
+ +NIE L+Q V NG
Sbjct: 390 TPHNIEGLKQAVRNG 404
>gb|EGO01485.1| hypothetical protein SERLA73DRAFT_103293 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1400
Score = 270 bits (689), Expect = 5e-70
Identities = 143/255 (56%), Positives = 180/255 (70%), Gaps = 6/255 (2%)
Frame = +3
Query: 3 CPRCGDYNGTVKKLTSTLRITHEKY--SKAEDIRSEYLSEFAEAVRQDKELKAFLNR-IQ 173
CP C NG VKK L+I H+K+ K + ++ FA AV KEL +LN+ +
Sbjct: 150 CPYCSATNGAVKK-AGALKIIHDKFRAKKTAEEMEKWKRTFAPAVEAQKELGMYLNKAVH 208
Query: 174 DDLTPLKVLNLFTKMVDEDCDVLYL---HGRPEKLIVTHMAVPPVVIRPSVITDGGSNED 344
+DL PLKVL+LF ++ DEDC++L L HGRPE+ I +++VPPV IRPSV DG SNED
Sbjct: 209 EDLNPLKVLDLFKRISDEDCELLGLRPAHGRPEEYIWQYISVPPVCIRPSVAQDGASNED 268
Query: 345 DITMKLLDIIKTNVRLHTELEAGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGK 524
D+T+KL +I+ TN + L G ME W+ LQ+ V +YINS+LPG+PS P K
Sbjct: 269 DLTVKLTEIVFTNALIKQGLSKGAPTAQFMEHWEFLQLSVAMYINSELPGVPSQ--PGQK 326
Query: 525 PMRGFVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKV 704
PMRGFVQRLKGKQGRFRGNLSGKRVDF+GRTVISPDPNL++ EVAVP +A VLTYPE+V
Sbjct: 327 PMRGFVQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLRIDEVAVPERVAKVLTYPERV 386
Query: 705 SRYNIEKLRQRVSNG 749
+ +NIE L+Q V NG
Sbjct: 387 TPHNIEGLKQAVRNG 401
>emb|CCM03577.1| predicted protein [Fibroporia radiculosa]
Length = 1403
Score = 269 bits (687), Expect = 9e-70
Identities = 139/255 (54%), Positives = 180/255 (70%), Gaps = 6/255 (2%)
Frame = +3
Query: 3 CPRCGDYNGTVKKLTSTLRITHEKY--SKAEDIRSEYLSEFAEAVRQDKELKAFLNR-IQ 173
CP C NGTVKK L+I H+K+ K D ++ + F AV KEL +LN+ +
Sbjct: 153 CPYCSSTNGTVKK-AGALKIIHDKFRAKKTADEMEKWKTTFTSAVEAQKELGMYLNKAVH 211
Query: 174 DDLTPLKVLNLFTKMVDEDCDVLYL---HGRPEKLIVTHMAVPPVVIRPSVITDGGSNED 344
+DL PLKVLNLF ++ DEDC++L L HGRPE+ + +++VPPV IRPSV DG SNED
Sbjct: 212 EDLNPLKVLNLFKRISDEDCELLGLRPAHGRPEEYVWQYISVPPVCIRPSVAQDGASNED 271
Query: 345 DITMKLLDIIKTNVRLHTELEAGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGK 524
D+T+KL +I+ TN + L G ME WD LQ+ V +YINS+LPG+PS M K
Sbjct: 272 DLTVKLTEIVFTNALIKQGLAKGAPTAQFMEQWDFLQLSVAMYINSELPGVPSQM--GQK 329
Query: 525 PMRGFVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKV 704
P+RGF QRLKGKQGRFRGNLSGKRVDF+GRTVISPDPNL++ EVAVP ++ +LTYPE+V
Sbjct: 330 PIRGFCQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLRIDEVAVPERVSKILTYPERV 389
Query: 705 SRYNIEKLRQRVSNG 749
+ +NI+ L++ V NG
Sbjct: 390 TAHNIDMLKKAVRNG 404
>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
polymerase III largest subunit, putative [Ricinus
communis]
Length = 1383
Score = 268 bits (686), Expect = 1e-69
Identities = 145/254 (57%), Positives = 185/254 (72%), Gaps = 2/254 (0%)
Frame = +3
Query: 3 CPRCGDYNGTVKKLTSTLRITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDL 182
C RCGD NG VKK S L I H++ + YL E A+ KE +A ++ L
Sbjct: 139 CTRCGDMNGMVKKAGSVLSIIHDRAKLVDG----YLEECRSAIAHTKESRAPISLATYIL 194
Query: 183 TPLKVLNLFTKMVDEDCDVLYLHGRPEKLIVTHMAVPPVVIRPSVITDG-GSNEDDITMK 359
TP+KVL+LF ++ +EDC+VL L+ RPEKLI+T++AVPP+ IRPSV TDG SNE+DIT +
Sbjct: 195 TPVKVLSLFKRIPEEDCEVLGLYDRPEKLIITNIAVPPISIRPSVFTDGLQSNENDITER 254
Query: 360 LLDIIKTNVRLHTELEAGGQ-ITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRG 536
L II+ N L EL G + +++WD LQ V LY+NSD+ +P+++ GKP+ G
Sbjct: 255 LKQIIQANASLRMELLEGRMSVNKYLDSWDGLQAAVALYMNSDVR-VPNNV-EVGKPLSG 312
Query: 537 FVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYN 716
FVQRLKGKQGRFRGNLSGKRV+FTGRTVISPDPNLK+TEVA+P+ MA +L+YPE+VS +N
Sbjct: 313 FVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPIHMARILSYPERVSHHN 372
Query: 717 IEKLRQRVSNGPQK 758
IEKLRQ VSNGPQK
Sbjct: 373 IEKLRQLVSNGPQK 386
>ref|XP_003026267.1| hypothetical protein SCHCODRAFT_71335 [Schizophyllum commune H4-8]
gi|300099948|gb|EFI91364.1| hypothetical protein
SCHCODRAFT_71335 [Schizophyllum commune H4-8]
Length = 1402
Score = 268 bits (685), Expect = 1e-69
Identities = 140/256 (54%), Positives = 180/256 (70%), Gaps = 6/256 (2%)
Frame = +3
Query: 3 CPRCGDYNGTVKKLTSTLRITHEKY--SKAEDIRSEYLSEFAEAVRQDKELKAFLNR-IQ 173
CP C NGTVKK L+I H+K+ K D + FA A+ KEL FLN+ +
Sbjct: 153 CPYCAATNGTVKK-AGALKIIHDKFRSKKTADEMERWKRTFASAIEAQKELAQFLNKAVN 211
Query: 174 DDLTPLKVLNLFTKMVDEDCDVLYLH---GRPEKLIVTHMAVPPVVIRPSVITDGGSNED 344
+DL PLKVL+LF ++ DEDC++L L GRPE+ + +++VPPV IRPSV DG SNED
Sbjct: 212 EDLNPLKVLDLFRRISDEDCELLGLRPKFGRPEEFLWQYISVPPVAIRPSVAQDGASNED 271
Query: 345 DITMKLLDIIKTNVRLHTELEAGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGK 524
D+T+KL +I+ TN + L G ME W+ LQ+ V +YINS+LPG+PS P +
Sbjct: 272 DLTVKLTEIVFTNALIKQGLAKGAPTPQFMEQWEFLQLSVAMYINSELPGVPSQ--PGQR 329
Query: 525 PMRGFVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKV 704
P+RGFVQRLKGKQGRFRGNLSGKRVDF+GRTVISPDPNL++ EVAVP +A +LTYPE+V
Sbjct: 330 PIRGFVQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLRIDEVAVPERVAKILTYPERV 389
Query: 705 SRYNIEKLRQRVSNGP 752
+ +N+E LR+ V NGP
Sbjct: 390 TVHNMEGLRKAVLNGP 405
>gb|EFA78358.1| RNA polymerase III [Polysphondylium pallidum PN500]
Length = 1393
Score = 268 bits (685), Expect = 1e-69
Identities = 138/258 (53%), Positives = 184/258 (71%), Gaps = 6/258 (2%)
Frame = +3
Query: 3 CPRCGDYNGTVKKLTSTLRITHEKYS-KAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDD 179
CPRC GTVKK+ S L++ HE+Y K ++ ++LS F EA++ + E+K + + Q+D
Sbjct: 155 CPRCNMVQGTVKKV-SALKLVHERYKGKNDEYIRDFLSNFDEAIKYNSEMKGHIKKAQED 213
Query: 180 LTPLKVLNLFTKMVDEDCDVLYLH---GRPEKLIVTHMAVPPVVIRPSVITDGGS--NED 344
L PL LNLF ++ +D ++L ++ GRPE+LI+TH+ VPPV IRPSV DGGS NED
Sbjct: 214 LNPLVALNLFKRITSQDTELLDMNPELGRPERLILTHILVPPVCIRPSVPMDGGSGSNED 273
Query: 345 DITMKLLDIIKTNVRLHTELEAGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGK 524
D+TMKL DI+ N + T ++ + ME WD LQ +YINS+LPGLP M P+ K
Sbjct: 274 DLTMKLSDILHINENIRTNVDKMEMVA-IMEDWDYLQASCAIYINSELPGLPLQMKPQ-K 331
Query: 525 PMRGFVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKV 704
P+RG QRLKGK GRFRGNLSGKRVDF+GRTVISPDPNL + EVAVP L+A+ +TYPE+V
Sbjct: 332 PIRGLSQRLKGKTGRFRGNLSGKRVDFSGRTVISPDPNLNIDEVAVPHLIALTMTYPERV 391
Query: 705 SRYNIEKLRQRVSNGPQK 758
+ YN+ +L++ V NGP K
Sbjct: 392 AEYNLTRLQKYVINGPDK 409
>gb|EJD42702.1| beta and beta-prime subunits of DNA dependent RNA-polymerase
[Auricularia delicata TFB-10046 SS5]
Length = 1404
Score = 268 bits (684), Expect = 2e-69
Identities = 137/256 (53%), Positives = 182/256 (71%), Gaps = 6/256 (2%)
Frame = +3
Query: 3 CPRCGDYNGTVKKLTSTLRITHEKY--SKAEDIRSEYLSEFAEAVRQDKELKAFLNR-IQ 173
CP C NGTVKK TL+I H+KY K D ++ S F AV K+L +L++ +
Sbjct: 153 CPYCASINGTVKK-GGTLKIVHDKYRAKKTADEMEKFKSTFKSAVEFQKDLGTYLSKAVI 211
Query: 174 DDLTPLKVLNLFTKMVDEDCDVLYL---HGRPEKLIVTHMAVPPVVIRPSVITDGGSNED 344
++L PLKVL+LF ++ DEDC++L + HGRPE + +++VPPV IRPSV DGGSNED
Sbjct: 212 EELNPLKVLDLFKRISDEDCELLGMKPVHGRPEHYLWQYISVPPVCIRPSVAQDGGSNED 271
Query: 345 DITMKLLDIIKTNVRLHTELEAGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGK 524
D+T+KL +I+ +N + ++ G I ME W+ LQ+ V +YINS++PGL + P +
Sbjct: 272 DLTVKLAEIVFSNTLIKQGIQKGAPIQQLMEQWEFLQISVAVYINSEMPGLQNQ--PNQR 329
Query: 525 PMRGFVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKV 704
P+RGF QRLKGKQGRFRGNLSGKRVDF+GRTVISPDPNL++ EVAVP +A +LTYPE+V
Sbjct: 330 PIRGFCQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLRIDEVAVPQRVAKILTYPERV 389
Query: 705 SRYNIEKLRQRVSNGP 752
+ N+EKLR V NGP
Sbjct: 390 TSSNLEKLRLAVRNGP 405