BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00018270
         (585 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
ref|XP_006405566.1| hypothetical protein EUTSA_v10028245mg [Eutr...    74   3e-11
ref|XP_002870737.1| pentatricopeptide repeat-containing protein ...    73   6e-11
ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
ref|NP_198814.1| pentatricopeptide repeat-containing protein [Ar...    72   1e-10
ref|XP_006286056.1| hypothetical protein CARUB_v10007588mg [Caps...    72   1e-10
ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]            72   1e-10
gb|EOY03346.1| Tetratricopeptide repeat (TPR)-like superfamily p...    70   3e-10
ref|XP_002517447.1| pentatricopeptide repeat-containing protein,...    70   4e-10
gb|ESW35832.1| hypothetical protein PHAVU_001G268500g [Phaseolus...    70   5e-10
gb|EMJ16220.1| hypothetical protein PRUPE_ppa003340mg [Prunus pe...    70   5e-10
ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containi...    70   5e-10
ref|XP_002324029.2| hypothetical protein POPTR_0017s11210g [Popu...    68   2e-09
ref|XP_006338491.1| PREDICTED: pentatricopeptide repeat-containi...    68   2e-09
ref|XP_004232248.1| PREDICTED: pentatricopeptide repeat-containi...    67   3e-09
ref|XP_004304956.1| PREDICTED: pentatricopeptide repeat-containi...    67   4e-09
ref|XP_006482520.1| PREDICTED: pentatricopeptide repeat-containi...    66   6e-09
ref|XP_006431055.1| hypothetical protein CICLE_v10011224mg [Citr...    66   6e-09
ref|XP_004502213.1| PREDICTED: pentatricopeptide repeat-containi...    66   6e-09

>ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic [Vitis vinifera]
           gi|296087770|emb|CBI35026.3| unnamed protein product
           [Vitis vinifera]
          Length = 675

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 32/86 (37%), Positives = 60/86 (69%)
 Frame = -1

Query: 585 QHYDQALSLYREIEAQGSILPEKVHFQVMHIYAHKGDLEAVITLFEKLELDDNIDKKALY 406
           + +++A ++Y+E+E +G +  ++VHFQ++ +Y  +GD + V +LFE+L+ D NI+KK L+
Sbjct: 585 REFEKADAIYKEMEEEGCVFSDEVHFQMLSLYGARGDFQMVDSLFERLDSDPNINKKELH 644

Query: 405 LSLSHIYLKLNRPRDAFRITSEIERR 328
           L ++ IY + NR  DA +I + +  R
Sbjct: 645 LVVASIYERANRLNDASQIMNRMRER 670


>ref|XP_006405566.1| hypothetical protein EUTSA_v10028245mg [Eutrema salsugineum]
           gi|557106704|gb|ESQ47019.1| hypothetical protein
           EUTSA_v10028245mg [Eutrema salsugineum]
          Length = 683

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 31/86 (36%), Positives = 60/86 (69%)
 Frame = -1

Query: 585 QHYDQALSLYREIEAQGSILPEKVHFQVMHIYAHKGDLEAVITLFEKLELDDNIDKKALY 406
           + +++A ++YRE++ +G + P++VHFQ++ +Y+ K D E V +LFE+LE D N++ K L+
Sbjct: 590 REFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFERLESDPNVNSKELH 649

Query: 405 LSLSHIYLKLNRPRDAFRITSEIERR 328
           L ++ +Y + +R  DA R+ + +  R
Sbjct: 650 LVVAALYERADRLNDASRVMNRMRER 675


>ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297316573|gb|EFH46996.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 680

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 30/86 (34%), Positives = 60/86 (69%)
 Frame = -1

Query: 585 QHYDQALSLYREIEAQGSILPEKVHFQVMHIYAHKGDLEAVITLFEKLELDDNIDKKALY 406
           + +++A ++YRE++ +G + P++VHFQ++ +Y+ K D E V +LFE+LE D N++ K L+
Sbjct: 587 REFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFERLESDPNVNSKELH 646

Query: 405 LSLSHIYLKLNRPRDAFRITSEIERR 328
           L ++ +Y + ++  DA R+ + +  R
Sbjct: 647 LVVAALYERADKLNDASRVMNRMRER 672


>ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Glycine max]
          Length = 658

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 33/90 (36%), Positives = 60/90 (66%)
 Frame = -1

Query: 585 QHYDQALSLYREIEAQGSILPEKVHFQVMHIYAHKGDLEAVITLFEKLELDDNIDKKALY 406
           + +D+A +LYR++  +G + P++VHFQ++ +Y  + D   V +LFEKL+ + NI+KK L+
Sbjct: 565 REFDKADALYRQMHEEGCVFPDEVHFQMLSLYGARKDFVMVESLFEKLDSNPNINKKELH 624

Query: 405 LSLSHIYLKLNRPRDAFRITSEIERRVELS 316
           L ++ IY + +R  DA RI + + ++   S
Sbjct: 625 LVVASIYERADRLNDASRIMNRMNQKANRS 654


>ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g39980, chloroplastic; Flags: Precursor
           gi|10176990|dbj|BAB10222.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007115|gb|AED94498.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 678

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 29/86 (33%), Positives = 60/86 (69%)
 Frame = -1

Query: 585 QHYDQALSLYREIEAQGSILPEKVHFQVMHIYAHKGDLEAVITLFEKLELDDNIDKKALY 406
           + +++A ++YRE++ +G + P++VHFQ++ +Y+ K D E V +LF++LE D N++ K L+
Sbjct: 585 REFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELH 644

Query: 405 LSLSHIYLKLNRPRDAFRITSEIERR 328
           L ++ +Y + ++  DA R+ + +  R
Sbjct: 645 LVVAALYERADKLNDASRVMNRMRER 670


>ref|XP_006286056.1| hypothetical protein CARUB_v10007588mg [Capsella rubella]
           gi|482554761|gb|EOA18954.1| hypothetical protein
           CARUB_v10007588mg [Capsella rubella]
          Length = 679

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 29/86 (33%), Positives = 60/86 (69%)
 Frame = -1

Query: 585 QHYDQALSLYREIEAQGSILPEKVHFQVMHIYAHKGDLEAVITLFEKLELDDNIDKKALY 406
           + +++A ++YRE++ +G + P++VHFQ++ +Y+ K D E V TLF++LE + N++ K L+
Sbjct: 587 REFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVETLFQRLESEPNVNSKELH 646

Query: 405 LSLSHIYLKLNRPRDAFRITSEIERR 328
           L ++ +Y + ++  DA R+ + +  R
Sbjct: 647 LVVAALYERADKLNDASRVMNRMRER 672


>ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Glycine max]
          Length = 667

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 32/86 (37%), Positives = 59/86 (68%)
 Frame = -1

Query: 585 QHYDQALSLYREIEAQGSILPEKVHFQVMHIYAHKGDLEAVITLFEKLELDDNIDKKALY 406
           + +D+A +LYR++  +G + P++VHFQ++ +Y  + D   V +LFEKL+ + NI+KK L+
Sbjct: 574 REFDKADALYRQMHEEGCVFPDEVHFQMLSLYGARKDFVMVESLFEKLDSNPNINKKELH 633

Query: 405 LSLSHIYLKLNRPRDAFRITSEIERR 328
           L ++ IY + +R  DA RI + + ++
Sbjct: 634 LVVASIYERADRLNDASRIMNRMNKK 659


>dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
          Length = 546

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 29/86 (33%), Positives = 60/86 (69%)
 Frame = -1

Query: 585 QHYDQALSLYREIEAQGSILPEKVHFQVMHIYAHKGDLEAVITLFEKLELDDNIDKKALY 406
           + +++A ++YRE++ +G + P++VHFQ++ +Y+ K D E V +LF++LE D N++ K L+
Sbjct: 453 REFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELH 512

Query: 405 LSLSHIYLKLNRPRDAFRITSEIERR 328
           L ++ +Y + ++  DA R+ + +  R
Sbjct: 513 LVVAALYERADKLNDASRVMNRMRER 538


>gb|EOY03346.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 672

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 32/86 (37%), Positives = 59/86 (68%)
 Frame = -1

Query: 585 QHYDQALSLYREIEAQGSILPEKVHFQVMHIYAHKGDLEAVITLFEKLELDDNIDKKALY 406
           + +D+A ++Y+E++ +G + P++VHFQ++ +   + D + V +LFEKL+ D NI+KK L+
Sbjct: 582 REFDKADAVYKEMQEEGCVFPDEVHFQMLSLCGARKDFKMVESLFEKLDSDPNINKKELH 641

Query: 405 LSLSHIYLKLNRPRDAFRITSEIERR 328
           L ++ IY + NR  DA +I + +  R
Sbjct: 642 LVVASIYERGNRLNDASQIMNRMSER 667


>ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543458|gb|EEF44989.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 654

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 32/85 (37%), Positives = 58/85 (68%)
 Frame = -1

Query: 585 QHYDQALSLYREIEAQGSILPEKVHFQVMHIYAHKGDLEAVITLFEKLELDDNIDKKALY 406
           + +++A ++YRE++ +  + P++VHFQ++ +Y  + D   V +LFEKL+ D NI+KK L+
Sbjct: 564 REFEKADAVYREMQEEECVFPDEVHFQMLSLYGARKDFIMVESLFEKLDSDPNINKKELH 623

Query: 405 LSLSHIYLKLNRPRDAFRITSEIER 331
           L ++ IY + NR  DA RI + + +
Sbjct: 624 LVVASIYERQNRLNDASRIMNRMSK 648


>gb|ESW35832.1| hypothetical protein PHAVU_001G268500g [Phaseolus vulgaris]
          Length = 677

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 30/86 (34%), Positives = 58/86 (67%)
 Frame = -1

Query: 585 QHYDQALSLYREIEAQGSILPEKVHFQVMHIYAHKGDLEAVITLFEKLELDDNIDKKALY 406
           + +D+A  LYR++  +G + P++VHFQ++ +Y  + D   V +LFEKL+ + N++KK L+
Sbjct: 584 REFDKADGLYRQMHEEGCVFPDEVHFQMLSLYGARKDFMMVESLFEKLDSNPNVNKKELH 643

Query: 405 LSLSHIYLKLNRPRDAFRITSEIERR 328
           L ++ IY + +R  DA R+ ++  ++
Sbjct: 644 LVVASIYERADRLNDASRVMNKTNQK 669


>gb|EMJ16220.1| hypothetical protein PRUPE_ppa003340mg [Prunus persica]
          Length = 584

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 32/86 (37%), Positives = 58/86 (67%)
 Frame = -1

Query: 585 QHYDQALSLYREIEAQGSILPEKVHFQVMHIYAHKGDLEAVITLFEKLELDDNIDKKALY 406
           + +++A +LYRE++ +G +  ++VHFQ++ +Y  + D + V  LF++L  D NI+KK L+
Sbjct: 494 REFEKADALYREMQEEGCVFSDEVHFQMLTLYGARKDFKMVEALFKRLMCDPNINKKELH 553

Query: 405 LSLSHIYLKLNRPRDAFRITSEIERR 328
           L ++ IY + NR  DA RI +++  R
Sbjct: 554 LVVASIYERSNRLNDASRIMNKMNER 579


>ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Cucumis sativus]
           gi|449530101|ref|XP_004172035.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Cucumis sativus]
          Length = 680

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 31/83 (37%), Positives = 57/83 (68%)
 Frame = -1

Query: 579 YDQALSLYREIEAQGSILPEKVHFQVMHIYAHKGDLEAVITLFEKLELDDNIDKKALYLS 400
           +D A +LY E++ +G +  ++VHFQ++ +Y  + D + + +LFE+L+ D NI+KK L+L 
Sbjct: 591 FDTADALYMEMQEEGCVFTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLV 650

Query: 399 LSHIYLKLNRPRDAFRITSEIER 331
           ++ IY + NR +DA RI + + +
Sbjct: 651 VASIYERGNRSKDASRIINRMNK 673


>ref|XP_002324029.2| hypothetical protein POPTR_0017s11210g [Populus trichocarpa]
           gi|550320029|gb|EEF04162.2| hypothetical protein
           POPTR_0017s11210g [Populus trichocarpa]
          Length = 639

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 30/83 (36%), Positives = 56/83 (67%)
 Frame = -1

Query: 579 YDQALSLYREIEAQGSILPEKVHFQVMHIYAHKGDLEAVITLFEKLELDDNIDKKALYLS 400
           +++A +LY+E++ +  + P++VHFQ++ +Y  + D   +  LFE+L+ D NI+KK L+L 
Sbjct: 549 FEKADALYKEMQEEECVFPDEVHFQMLSLYGARKDFMMIEALFERLDSDPNINKKELHLV 608

Query: 399 LSHIYLKLNRPRDAFRITSEIER 331
           ++ IY + NR  DA RI + + +
Sbjct: 609 VASIYERKNRLNDASRIMNRMSK 631


>ref|XP_006338491.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Solanum tuberosum]
          Length = 668

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 31/86 (36%), Positives = 56/86 (65%)
 Frame = -1

Query: 585 QHYDQALSLYREIEAQGSILPEKVHFQVMHIYAHKGDLEAVITLFEKLELDDNIDKKALY 406
           Q +++A  +Y+E+  +G +  ++VHFQ++ +Y  + + E V TL++ L+ D N++KK L+
Sbjct: 580 QEFEKADMVYKEMHEEGCVFSDEVHFQMLSLYGARRNYEMVETLYKMLDSDPNVNKKELH 639

Query: 405 LSLSHIYLKLNRPRDAFRITSEIERR 328
           L ++ IY K NR  DA RI + +  R
Sbjct: 640 LVVAGIYEKANRVNDASRIVNRMTYR 665


>ref|XP_004232248.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Solanum lycopersicum]
          Length = 665

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 31/86 (36%), Positives = 56/86 (65%)
 Frame = -1

Query: 585 QHYDQALSLYREIEAQGSILPEKVHFQVMHIYAHKGDLEAVITLFEKLELDDNIDKKALY 406
           Q +++A  +Y+E+  +G +  ++VHFQ++ +Y  + + E V TL++ L+ D N++KK L+
Sbjct: 577 QEFEKADMVYKEMHEEGCVFSDEVHFQMLSLYGARRNYEMVETLYKVLDSDPNVNKKELH 636

Query: 405 LSLSHIYLKLNRPRDAFRITSEIERR 328
           L ++ IY K NR  DA RI + +  R
Sbjct: 637 LVVAAIYEKANRMNDASRIINRMTYR 662


>ref|XP_004304956.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 672

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 31/88 (35%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
 Frame = -1

Query: 585 QHYDQALSLYREIEAQGSILPEKVHFQVMHIYAHKGDLEAVITLFEKLELDDNIDKKALY 406
           + +++A ++YRE++ +G +  +++HFQ++ +Y  + D + V  +FE+L  D NI+KK L+
Sbjct: 582 REFEKADAVYREMQEEGCVFSDEIHFQMLSLYGARKDFKTVEAMFERLVCDPNINKKELH 641

Query: 405 LSLSHIYLKLNRPRDAFRITSEI-ERRV 325
           L ++ IY + NR  D+ RI + + E RV
Sbjct: 642 LVVAGIYERSNRLNDSHRIMNRMNESRV 669


>ref|XP_006482520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Citrus sinensis]
          Length = 677

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 30/86 (34%), Positives = 55/86 (63%)
 Frame = -1

Query: 585 QHYDQALSLYREIEAQGSILPEKVHFQVMHIYAHKGDLEAVITLFEKLELDDNIDKKALY 406
           + ++ A  LY E++ +G +  ++VHFQ++ +Y  + D   + +LFE+L+ D NI+KK L+
Sbjct: 584 REFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELH 643

Query: 405 LSLSHIYLKLNRPRDAFRITSEIERR 328
             ++ IY + NR  DA RI + + +R
Sbjct: 644 HVVAGIYERANRLNDASRIMNRMNKR 669


>ref|XP_006431055.1| hypothetical protein CICLE_v10011224mg [Citrus clementina]
           gi|557533112|gb|ESR44295.1| hypothetical protein
           CICLE_v10011224mg [Citrus clementina]
          Length = 677

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 30/86 (34%), Positives = 55/86 (63%)
 Frame = -1

Query: 585 QHYDQALSLYREIEAQGSILPEKVHFQVMHIYAHKGDLEAVITLFEKLELDDNIDKKALY 406
           + ++ A  LY E++ +G +  ++VHFQ++ +Y  + D   + +LFE+L+ D NI+KK L+
Sbjct: 584 REFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELH 643

Query: 405 LSLSHIYLKLNRPRDAFRITSEIERR 328
             ++ IY + NR  DA RI + + +R
Sbjct: 644 HVVAGIYERANRLNDASRIMNRMNKR 669


>ref|XP_004502213.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Cicer arietinum]
          Length = 669

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 29/84 (34%), Positives = 56/84 (66%)
 Frame = -1

Query: 579 YDQALSLYREIEAQGSILPEKVHFQVMHIYAHKGDLEAVITLFEKLELDDNIDKKALYLS 400
           +++A +LY+++  +G + P++VHFQ++ +Y  + D   V +LFEK++   NI+KK LY  
Sbjct: 578 FEKADALYKQMYEKGCVFPDEVHFQMLSLYGARMDFTRVESLFEKIDSHPNINKKELYFV 637

Query: 399 LSHIYLKLNRPRDAFRITSEIERR 328
           +++IY + +R  DA RI + +  +
Sbjct: 638 VANIYERADRFNDASRIMNRLNHK 661