BLASTX nr result
ID: Ephedra27_contig00018228
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00018228
(490 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subun... 276 3e-72
ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai... 272 4e-71
dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 271 7e-71
dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 268 4e-70
gb|AAF06098.1| ribulose 1,5-bisphosphate carboxylase small chain... 266 2e-69
gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 266 3e-69
sp|Q42915.1|RBS_MANES RecName: Full=Ribulose bisphosphate carbox... 264 8e-69
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox... 264 1e-68
gb|AAF06100.1| ribulose 1,5-bisphosphate carboxylase small chain... 263 2e-68
ref|XP_004299075.1| PREDICTED: ribulose bisphosphate carboxylase... 261 5e-68
ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chai... 261 7e-68
dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 259 2e-67
gb|EMJ16250.1| hypothetical protein PRUPE_ppa012123mg [Prunus pe... 259 3e-67
sp|P29684.1|RBS_HEVBR RecName: Full=Ribulose bisphosphate carbox... 258 4e-67
gb|AFK42721.1| unknown [Lotus japonicus] 258 6e-67
sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carbox... 257 1e-66
ref|XP_002305162.2| Ribulose bisphosphate carboxylase small chai... 257 1e-66
ref|XP_004303137.1| PREDICTED: ribulose bisphosphate carboxylase... 256 2e-66
gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subun... 256 2e-66
sp|Q96542.1|RBS_BETVE RecName: Full=Ribulose bisphosphate carbox... 256 3e-66
>gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subunit [Jatropha
curcas]
Length = 181
Score = 276 bits (705), Expect = 3e-72
Identities = 128/162 (79%), Positives = 144/162 (88%)
Frame = -3
Query: 488 TATATAVSRTTPAQASMVAPFTGLKSAAAFPATRKSADITTLASNGGRVSCMKVWPTVGL 309
TAT +++R +PAQA+MVAPFTGLKS A FPA + + DIT++A NGGRV CMKVWPT GL
Sbjct: 8 TATVASINRASPAQATMVAPFTGLKSTAGFPARKTTNDITSIAGNGGRVQCMKVWPTQGL 67
Query: 308 KKFETLSYLPDLTREQLLKQVEYLLRQKLIPCLEFELEHGFVYREHHHSPGYYDGRYWTM 129
KKFETLSYLP LTREQL K+VEYLLR +PCLEFELEHGFVYRE++ SPGYYDGRYWTM
Sbjct: 68 KKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTM 127
Query: 128 WKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQ 3
WKLPMFGCTDAVQVLNELDEAIKAHP+GF+RIIGFD+ RQVQ
Sbjct: 128 WKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQ 169
>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast
precursor, putative [Ricinus communis]
gi|223528159|gb|EEF30223.1| Ribulose bisphosphate
carboxylase small chain, chloroplast precursor, putative
[Ricinus communis]
Length = 185
Score = 272 bits (695), Expect = 4e-71
Identities = 129/163 (79%), Positives = 146/163 (89%), Gaps = 1/163 (0%)
Frame = -3
Query: 488 TATATAVSRTTPAQASMVAPFTGLKSAAAFPATRKS-ADITTLASNGGRVSCMKVWPTVG 312
TAT +++R +PAQASMVAPFTGLKS +AFP TRK+ DITTLA+NGGRV CM+VWP +G
Sbjct: 8 TATVASLNRASPAQASMVAPFTGLKSTSAFPVTRKTNTDITTLANNGGRVQCMQVWPPLG 67
Query: 311 LKKFETLSYLPDLTREQLLKQVEYLLRQKLIPCLEFELEHGFVYREHHHSPGYYDGRYWT 132
KKFETLSYLPDLTREQL K+VEYLLR+ +PCLEFELEHGFVYRE+ SPGYYDGRYWT
Sbjct: 68 KKKFETLSYLPDLTREQLAKEVEYLLRKGWVPCLEFELEHGFVYRENARSPGYYDGRYWT 127
Query: 131 MWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQ 3
MWKLPMFGC+DAVQVL ELDEAIKA+P+ F+RIIGFDNVRQVQ
Sbjct: 128 MWKLPMFGCSDAVQVLKELDEAIKAYPNSFVRIIGFDNVRQVQ 170
>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Panax ginseng]
Length = 183
Score = 271 bits (693), Expect = 7e-71
Identities = 127/162 (78%), Positives = 140/162 (86%)
Frame = -3
Query: 488 TATATAVSRTTPAQASMVAPFTGLKSAAAFPATRKSADITTLASNGGRVSCMKVWPTVGL 309
+AT AVSR PAQASMVAPFTGLKS AAFP TRK DIT+L SNGGRV CMKVWP +GL
Sbjct: 8 SATVAAVSRAVPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMKVWPPLGL 67
Query: 308 KKFETLSYLPDLTREQLLKQVEYLLRQKLIPCLEFELEHGFVYREHHHSPGYYDGRYWTM 129
KKFETLSYLP LT+EQL K+V+YLLR +PCLEFELEHGFVYREHHHSPGYYDGRYWTM
Sbjct: 68 KKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHHSPGYYDGRYWTM 127
Query: 128 WKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQ 3
WKLPMFGCTD+ QVL E++E K +P+ +IRIIGFDNVRQVQ
Sbjct: 128 WKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIGFDNVRQVQ 169
>dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 268 bits (686), Expect = 4e-70
Identities = 124/162 (76%), Positives = 142/162 (87%)
Frame = -3
Query: 488 TATATAVSRTTPAQASMVAPFTGLKSAAAFPATRKSADITTLASNGGRVSCMKVWPTVGL 309
+A AV+R +PAQASMVAPFTGLKSA+AFP TRKSADIT+LASNGGRV CM+VWP +G
Sbjct: 8 SAAVAAVNRASPAQASMVAPFTGLKSASAFPVTRKSADITSLASNGGRVQCMQVWPPIGK 67
Query: 308 KKFETLSYLPDLTREQLLKQVEYLLRQKLIPCLEFELEHGFVYREHHHSPGYYDGRYWTM 129
KKFETLSYLP L+RE+LLK++EYLLR +PCLEFELE GFVYR++H SPGYYDGRYWTM
Sbjct: 68 KKFETLSYLPPLSREELLKEIEYLLRMNWVPCLEFELEKGFVYRDNHKSPGYYDGRYWTM 127
Query: 128 WKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQ 3
WKLPMFGCTD +QV ELDEAIK +P+ F+RIIGFDN RQVQ
Sbjct: 128 WKLPMFGCTDPLQVFKELDEAIKTYPNAFVRIIGFDNKRQVQ 169
>gb|AAF06098.1| ribulose 1,5-bisphosphate carboxylase small chain precursor
[Manihot esculenta] gi|6272551|gb|AAF06101.1| ribulose
1,5-bisphosphate carboxylase small chain precursor
[Manihot esculenta]
Length = 184
Score = 266 bits (680), Expect = 2e-69
Identities = 128/163 (78%), Positives = 140/163 (85%), Gaps = 1/163 (0%)
Frame = -3
Query: 488 TATATAVSRTTPAQASMVAPFTGLKSAAAFPATRK-SADITTLASNGGRVSCMKVWPTVG 312
TAT +++R +PAQASMVAPFTGLKS +AFPAT K SADIT+LASNGGRV CM+VWPT G
Sbjct: 8 TATVASINRASPAQASMVAPFTGLKSTSAFPATTKTSADITSLASNGGRVQCMQVWPTRG 67
Query: 311 LKKFETLSYLPDLTREQLLKQVEYLLRQKLIPCLEFELEHGFVYREHHHSPGYYDGRYWT 132
KKFETLSYLP L+REQL +++YLLR IPCLEFELEHGFVYR H PGYYDGRYWT
Sbjct: 68 KKKFETLSYLPPLSREQLASEIDYLLRSGWIPCLEFELEHGFVYRAHGSLPGYYDGRYWT 127
Query: 131 MWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQ 3
MWKLPMFGCTD+ QVL ELDE IKAHPDGF RIIGFDNVRQVQ
Sbjct: 128 MWKLPMFGCTDSSQVLKELDELIKAHPDGFARIIGFDNVRQVQ 170
>gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit 1A
[Corchorus olitorius]
Length = 183
Score = 266 bits (679), Expect = 3e-69
Identities = 126/162 (77%), Positives = 143/162 (88%), Gaps = 1/162 (0%)
Frame = -3
Query: 485 ATATAVSRTTPAQASMVAPFTGLKSAAAFPATRKS-ADITTLASNGGRVSCMKVWPTVGL 309
++AT V+R +PAQA++VAPFTGLKSA+AFP TRK+ DIT++ASNGGRV CM+VWP +G
Sbjct: 7 SSATVVNRASPAQATLVAPFTGLKSASAFPTTRKNNRDITSIASNGGRVQCMQVWPPLGK 66
Query: 308 KKFETLSYLPDLTREQLLKQVEYLLRQKLIPCLEFELEHGFVYREHHHSPGYYDGRYWTM 129
KKFETLSYLPDLT QL K+V+YLLR IPCLEFELEHGFVYREHHHSPGYYDGRYWTM
Sbjct: 67 KKFETLSYLPDLTPVQLAKEVDYLLRSGWIPCLEFELEHGFVYREHHHSPGYYDGRYWTM 126
Query: 128 WKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQ 3
WKLPMFGCTD+ QVL EL+EA KA+PD FIRIIGFDN RQVQ
Sbjct: 127 WKLPMFGCTDSSQVLKELEEAKKAYPDAFIRIIGFDNRRQVQ 168
>sp|Q42915.1|RBS_MANES RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|168363|gb|AAA99429.1| ribulose
1,5-bisphosphate carboxylase [Manihot esculenta]
gi|6272549|gb|AAF06099.1| ribulose 1,5-bisphosphate
carboxylase small chain precursor [Manihot esculenta]
Length = 182
Score = 264 bits (675), Expect = 8e-69
Identities = 124/163 (76%), Positives = 138/163 (84%), Gaps = 1/163 (0%)
Frame = -3
Query: 488 TATATAVSRTTPAQASMVAPFTGLKSAAAFPATRKS-ADITTLASNGGRVSCMKVWPTVG 312
TAT +++R +PAQA+MVAPFTGLKS FP TRK+ +DIT++ SNGG+V CMKVWPT+G
Sbjct: 8 TATVASINRVSPAQATMVAPFTGLKSTPVFPTTRKTNSDITSITSNGGKVQCMKVWPTLG 67
Query: 311 LKKFETLSYLPDLTREQLLKQVEYLLRQKLIPCLEFELEHGFVYREHHHSPGYYDGRYWT 132
+KKFETLSYLP LTREQL +VEYLLR IPCLEFELEHG VYREH PGYYDGRYWT
Sbjct: 68 MKKFETLSYLPPLTREQLASEVEYLLRSGWIPCLEFELEHGLVYREHARVPGYYDGRYWT 127
Query: 131 MWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQ 3
MWKLPMFGCTDA QVL ELDE IK HPDG+ RIIGFDNVRQVQ
Sbjct: 128 MWKLPMFGCTDAAQVLKELDELIKHHPDGYARIIGFDNVRQVQ 170
>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Aralia elata]
Length = 183
Score = 264 bits (674), Expect = 1e-68
Identities = 124/162 (76%), Positives = 139/162 (85%)
Frame = -3
Query: 488 TATATAVSRTTPAQASMVAPFTGLKSAAAFPATRKSADITTLASNGGRVSCMKVWPTVGL 309
+A+ AVSR PAQASMVAPFTGLKS AAFP TRK DIT+L SNGGRV CMKVWP +GL
Sbjct: 8 SASVAAVSRAAPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMKVWPPLGL 67
Query: 308 KKFETLSYLPDLTREQLLKQVEYLLRQKLIPCLEFELEHGFVYREHHHSPGYYDGRYWTM 129
KKFETLSYLP LT E+L K+V+YLLR +PCLEFELEHG+VYRE+H SPGYYDGRYWTM
Sbjct: 68 KKFETLSYLPPLTNEELAKEVDYLLRSGWVPCLEFELEHGWVYRENHRSPGYYDGRYWTM 127
Query: 128 WKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQ 3
WKLPMFGCTD+ QVLNE++E K +P+ FIRIIGFDNVRQVQ
Sbjct: 128 WKLPMFGCTDSSQVLNEVEECKKEYPNAFIRIIGFDNVRQVQ 169
>gb|AAF06100.1| ribulose 1,5-bisphosphate carboxylase small chain precursor
[Manihot esculenta]
Length = 184
Score = 263 bits (672), Expect = 2e-68
Identities = 127/163 (77%), Positives = 139/163 (85%), Gaps = 1/163 (0%)
Frame = -3
Query: 488 TATATAVSRTTPAQASMVAPFTGLKSAAAFPATRK-SADITTLASNGGRVSCMKVWPTVG 312
TAT +++R +PAQASMVAPFTGLKS +AF AT K SADIT+LASNGGRV CM+VWPT G
Sbjct: 8 TATVASINRASPAQASMVAPFTGLKSTSAFTATTKTSADITSLASNGGRVQCMQVWPTRG 67
Query: 311 LKKFETLSYLPDLTREQLLKQVEYLLRQKLIPCLEFELEHGFVYREHHHSPGYYDGRYWT 132
KKFETLSYLP L+REQL +++YLLR IPCLEFELEHGFVYR H PGYYDGRYWT
Sbjct: 68 KKKFETLSYLPPLSREQLASEIDYLLRSGWIPCLEFELEHGFVYRAHGSLPGYYDGRYWT 127
Query: 131 MWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQ 3
MWKLPMFGCTD+ QVL ELDE IKAHPDGF RIIGFDNVRQVQ
Sbjct: 128 MWKLPMFGCTDSSQVLKELDELIKAHPDGFARIIGFDNVRQVQ 170
>ref|XP_004299075.1| PREDICTED: ribulose bisphosphate carboxylase small chain 1,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 180
Score = 261 bits (668), Expect = 5e-68
Identities = 125/162 (77%), Positives = 140/162 (86%)
Frame = -3
Query: 488 TATATAVSRTTPAQASMVAPFTGLKSAAAFPATRKSADITTLASNGGRVSCMKVWPTVGL 309
+AT +V+R P QASMVAPF GLKSA+AFP TRK+ DITTLASNGGRV CM+VWP VGL
Sbjct: 8 SATVASVNRA-PVQASMVAPFNGLKSASAFPVTRKANDITTLASNGGRVQCMQVWPPVGL 66
Query: 308 KKFETLSYLPDLTREQLLKQVEYLLRQKLIPCLEFELEHGFVYREHHHSPGYYDGRYWTM 129
KKFETLSYLP L+ E L K+VEYLLR K +PCLEFELEHGFVYREH +SPGYYDGRYWTM
Sbjct: 67 KKFETLSYLPPLSVESLAKEVEYLLRNKWVPCLEFELEHGFVYREHGNSPGYYDGRYWTM 126
Query: 128 WKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQ 3
WKLPMFGCTDA QV+ EL+EA K +P+ FIRIIGFDN+RQVQ
Sbjct: 127 WKLPMFGCTDASQVIAELEEAKKTYPEAFIRIIGFDNIRQVQ 168
>ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chain 1B, chloroplast
precursor, putative [Ricinus communis]
gi|223539597|gb|EEF41184.1| Ribulose bisphosphate
carboxylase small chain 1B, chloroplast precursor,
putative [Ricinus communis]
Length = 181
Score = 261 bits (667), Expect = 7e-68
Identities = 124/161 (77%), Positives = 144/161 (89%), Gaps = 1/161 (0%)
Frame = -3
Query: 482 TATAVSRTTPAQASMVAPFTGLKSAAAFPATRKSA-DITTLASNGGRVSCMKVWPTVGLK 306
++ +VSR++PAQA+MVAPFTGLKSAA+FP TRK+ DIT++ASNGGRV CM+VWP +G K
Sbjct: 7 SSASVSRSSPAQATMVAPFTGLKSAASFPVTRKANNDITSIASNGGRVQCMQVWPPLGKK 66
Query: 305 KFETLSYLPDLTREQLLKQVEYLLRQKLIPCLEFELEHGFVYREHHHSPGYYDGRYWTMW 126
KFETLSYLPDLT EQL K+V+YLLR+ IPCLEFELEHGFVYRE+H SPGYYDGRYWTMW
Sbjct: 67 KFETLSYLPDLTDEQLAKEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGYYDGRYWTMW 126
Query: 125 KLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQ 3
KLPMFGC+D+ QVL ELDEA KA+P+ FIRIIGFDN RQVQ
Sbjct: 127 KLPMFGCSDSTQVLKELDEAKKAYPNSFIRIIGFDNRRQVQ 167
>dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 259 bits (663), Expect = 2e-67
Identities = 121/162 (74%), Positives = 135/162 (83%)
Frame = -3
Query: 488 TATATAVSRTTPAQASMVAPFTGLKSAAAFPATRKSADITTLASNGGRVSCMKVWPTVGL 309
+A AV T+P QA+MVAPFTGLKSA+AFP TRKS DIT+L SNGGRV CM+VWP VGL
Sbjct: 8 SAAVAAVKSTSPVQAAMVAPFTGLKSASAFPVTRKSNDITSLPSNGGRVQCMQVWPPVGL 67
Query: 308 KKFETLSYLPDLTREQLLKQVEYLLRQKLIPCLEFELEHGFVYREHHHSPGYYDGRYWTM 129
KKFETLSYLP LT QL K+++YLLR +PCLEFE E GFVYREHHHSPGYYDGRYWTM
Sbjct: 68 KKFETLSYLPPLTPTQLAKEIDYLLRSGWVPCLEFETEKGFVYREHHHSPGYYDGRYWTM 127
Query: 128 WKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQ 3
WKLPMFGCTD+ QVL EL+E KA+P F+RIIGFDN RQVQ
Sbjct: 128 WKLPMFGCTDSAQVLKELEECKKAYPTAFVRIIGFDNKRQVQ 169
>gb|EMJ16250.1| hypothetical protein PRUPE_ppa012123mg [Prunus persica]
Length = 183
Score = 259 bits (661), Expect = 3e-67
Identities = 121/162 (74%), Positives = 138/162 (85%)
Frame = -3
Query: 488 TATATAVSRTTPAQASMVAPFTGLKSAAAFPATRKSADITTLASNGGRVSCMKVWPTVGL 309
T + R PAQAS+VAPFTGLKSA+AFP +K+ DIT++ASNGGRV CMKVWPTVGL
Sbjct: 10 TVASVYADRAAPAQASLVAPFTGLKSASAFPGAKKTNDITSIASNGGRVQCMKVWPTVGL 69
Query: 308 KKFETLSYLPDLTREQLLKQVEYLLRQKLIPCLEFELEHGFVYREHHHSPGYYDGRYWTM 129
KKFETLSYLP L+ E L K+V+YLLR+ +PCLEFELE GFVYRE+H SPGYYDGRYWTM
Sbjct: 70 KKFETLSYLPPLSPESLAKEVDYLLRKNWVPCLEFELEKGFVYRENHRSPGYYDGRYWTM 129
Query: 128 WKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQ 3
WKLPMFGCTD+ QVL EL+EA KA+P+ FIRIIGFDNVRQVQ
Sbjct: 130 WKLPMFGCTDSSQVLKELEEAKKANPNSFIRIIGFDNVRQVQ 171
>sp|P29684.1|RBS_HEVBR RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|168217|gb|AAA33361.1|
ribulose-1,5-bisphosphate carboxylase small subunit
[Hevea brasiliensis]
Length = 183
Score = 258 bits (660), Expect = 4e-67
Identities = 124/163 (76%), Positives = 139/163 (85%), Gaps = 1/163 (0%)
Frame = -3
Query: 488 TATATAVSRTTPAQASMVAPFTGLKSAAAFPATRKSA-DITTLASNGGRVSCMKVWPTVG 312
TA ++R +PAQASMVAPFTGLKS +AFP TRK+ DIT++ASNGGRV CM+VWP G
Sbjct: 8 TAAVACINRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCMQVWPPRG 67
Query: 311 LKKFETLSYLPDLTREQLLKQVEYLLRQKLIPCLEFELEHGFVYREHHHSPGYYDGRYWT 132
K +ETLSYLP LTREQL K+VEYLLR+ +PCLEFELEHG VYRE+H SPGYYDGRYWT
Sbjct: 68 KKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWT 127
Query: 131 MWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQ 3
MWKLPMFGCTDAVQVL ELDE IKA+PD + RIIGFDNVRQVQ
Sbjct: 128 MWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQVQ 170
>gb|AFK42721.1| unknown [Lotus japonicus]
Length = 182
Score = 258 bits (659), Expect = 6e-67
Identities = 119/162 (73%), Positives = 138/162 (85%)
Frame = -3
Query: 488 TATATAVSRTTPAQASMVAPFTGLKSAAAFPATRKSADITTLASNGGRVSCMKVWPTVGL 309
+A AT + +PAQASMVAPFTGLKS A FP + + DIT++ASNGGRV CM+VWP +G
Sbjct: 9 SAAATTIKGASPAQASMVAPFTGLKSMAGFPVRKANNDITSIASNGGRVQCMQVWPPIGK 68
Query: 308 KKFETLSYLPDLTREQLLKQVEYLLRQKLIPCLEFELEHGFVYREHHHSPGYYDGRYWTM 129
KKFETLSYLP LT EQLLK+VEYLLR+ +PCLEFE E GFVYRE+H SPGYYDGRYWTM
Sbjct: 69 KKFETLSYLPPLTTEQLLKEVEYLLRKGWVPCLEFETEKGFVYRENHKSPGYYDGRYWTM 128
Query: 128 WKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQ 3
WKLPMFGC+DA QVL ELDEA++A+P+ F+RIIGFDNVRQVQ
Sbjct: 129 WKLPMFGCSDAAQVLKELDEAVRAYPNAFVRIIGFDNVRQVQ 170
>sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|19581|emb|CAA46475.1| ribulose bisphosphate
carboxylase [Malus sp.]
Length = 183
Score = 257 bits (657), Expect = 1e-66
Identities = 120/162 (74%), Positives = 136/162 (83%)
Frame = -3
Query: 488 TATATAVSRTTPAQASMVAPFTGLKSAAAFPATRKSADITTLASNGGRVSCMKVWPTVGL 309
T + R PAQA MVAPFTGLKS++A P TRKS DIT++ASNGGRV CM+VWP +GL
Sbjct: 10 TVATVSADRPAPAQARMVAPFTGLKSSSASPVTRKSNDITSIASNGGRVQCMQVWPPLGL 69
Query: 308 KKFETLSYLPDLTREQLLKQVEYLLRQKLIPCLEFELEHGFVYREHHHSPGYYDGRYWTM 129
KKFETLSYLP L+ E L K+V+YLLR+ +PCLEFELEHGFVYRE+H SPGYYDGRYWTM
Sbjct: 70 KKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTM 129
Query: 128 WKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQ 3
WKLPMFGCTD+ QVL EL+EA KA+P FIRIIGFDNVRQVQ
Sbjct: 130 WKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQ 171
>ref|XP_002305162.2| Ribulose bisphosphate carboxylase small chain 1A family protein
[Populus trichocarpa] gi|118487084|gb|ABK95372.1|
unknown [Populus trichocarpa]
gi|118488041|gb|ABK95841.1| unknown [Populus
trichocarpa] gi|550340699|gb|EEE85673.2| Ribulose
bisphosphate carboxylase small chain 1A family protein
[Populus trichocarpa]
Length = 182
Score = 257 bits (657), Expect = 1e-66
Identities = 122/163 (74%), Positives = 140/163 (85%), Gaps = 1/163 (0%)
Frame = -3
Query: 488 TATATAVSRTTPAQASMVAPFTGLKSAAAFP-ATRKSADITTLASNGGRVSCMKVWPTVG 312
++ A A TPAQA+MVAPF GLKSAAAFP +TRK+ DIT++ASNGGRV CM+VWP G
Sbjct: 8 SSAAVATVNRTPAQANMVAPFNGLKSAAAFPVSTRKANDITSIASNGGRVQCMQVWPPTG 67
Query: 311 LKKFETLSYLPDLTREQLLKQVEYLLRQKLIPCLEFELEHGFVYREHHHSPGYYDGRYWT 132
LKKFETLSYLPDLT E+L K+++YLLR K +PCLEFELE G+VYREHH SPGYYDGRYWT
Sbjct: 68 LKKFETLSYLPDLTEEELAKEIDYLLRSKWVPCLEFELEKGWVYREHHSSPGYYDGRYWT 127
Query: 131 MWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQ 3
MWKLPMFGCT+A QVL EL+EA KA+P+ FIRIIGFDN RQVQ
Sbjct: 128 MWKLPMFGCTEASQVLLELEEAKKAYPNAFIRIIGFDNTRQVQ 170
>ref|XP_004303137.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 182
Score = 256 bits (655), Expect = 2e-66
Identities = 127/162 (78%), Positives = 140/162 (86%), Gaps = 1/162 (0%)
Frame = -3
Query: 485 ATATAVSRTTPAQASMVAPFTGLKSAAAFPATRKS-ADITTLASNGGRVSCMKVWPTVGL 309
A ATA S PAQASMVAPFTGLKSA+AFP TRK+ +DIT+L SNGGRV CM+VWP VGL
Sbjct: 12 AVATAAS---PAQASMVAPFTGLKSASAFPITRKTNSDITSLPSNGGRVQCMQVWPPVGL 68
Query: 308 KKFETLSYLPDLTREQLLKQVEYLLRQKLIPCLEFELEHGFVYREHHHSPGYYDGRYWTM 129
KKFETLSYLP LT E L K+V++LLR K +PCLEFELE GFVYRE+H SPGYYDGRYWTM
Sbjct: 69 KKFETLSYLPPLTSESLAKEVDFLLRNKWVPCLEFELEKGFVYRENHKSPGYYDGRYWTM 128
Query: 128 WKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQ 3
WKLPMFGCTDA QVL EL+EA KA+P+ FIRIIGFDNVRQVQ
Sbjct: 129 WKLPMFGCTDASQVLKELEEAKKAYPNAFIRIIGFDNVRQVQ 170
>gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subunit [Malus
domestica x Pyrus communis]
Length = 179
Score = 256 bits (654), Expect = 2e-66
Identities = 119/161 (73%), Positives = 139/161 (86%)
Frame = -3
Query: 485 ATATAVSRTTPAQASMVAPFTGLKSAAAFPATRKSADITTLASNGGRVSCMKVWPTVGLK 306
++ T + + PAQA MVAPFTGLKS++AFP TRKS DIT++ASNGGRV CM+VWP +GLK
Sbjct: 7 SSGTVATVSAPAQARMVAPFTGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLK 66
Query: 305 KFETLSYLPDLTREQLLKQVEYLLRQKLIPCLEFELEHGFVYREHHHSPGYYDGRYWTMW 126
KFETLSYLP L+ E L K+V+YLLR+ +PCLEFELEHGFVYRE++ SPGYYDGRYWTMW
Sbjct: 67 KFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMW 126
Query: 125 KLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQ 3
KLPMFGCTD+ QVL EL+EA KA+P FIRIIGFDNVRQVQ
Sbjct: 127 KLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQ 167
>sp|Q96542.1|RBS_BETVE RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|1536889|emb|CAA69102.1|
ribulose-bisphosphate carboxylase [Betula pendula]
Length = 182
Score = 256 bits (653), Expect = 3e-66
Identities = 122/163 (74%), Positives = 140/163 (85%), Gaps = 1/163 (0%)
Frame = -3
Query: 488 TATATAVSRTTPAQASMVAPFTGLKSAAAFPATRKSA-DITTLASNGGRVSCMKVWPTVG 312
+AT AVSR +PAQ+SMVAPFT LKS +AFP T+K+ DIT++ASNGGRV CM+VWP +G
Sbjct: 8 SATVAAVSRASPAQSSMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLG 67
Query: 311 LKKFETLSYLPDLTREQLLKQVEYLLRQKLIPCLEFELEHGFVYREHHHSPGYYDGRYWT 132
LKKFETLSYLP L+ EQL K+V+YLLR+ LIPCLEFELEHGFVYREH+ SPGYYDGRYWT
Sbjct: 68 LKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWT 127
Query: 131 MWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQ 3
MWKLPMFGC D+ QVL EL+E KA+P FIRIIGFDN RQVQ
Sbjct: 128 MWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQ 170