BLASTX nr result
ID: Ephedra27_contig00018223
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00018223
(792 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003554853.1| PREDICTED: chloroplastic group IIA intron sp... 101 3e-19
ref|XP_006408495.1| hypothetical protein EUTSA_v10019986mg [Eutr... 100 8e-19
ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti... 100 8e-19
ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron sp... 100 8e-19
ref|XP_004489340.1| PREDICTED: chloroplastic group IIA intron sp... 99 2e-18
ref|XP_004489339.1| PREDICTED: chloroplastic group IIA intron sp... 99 2e-18
ref|XP_004975884.1| PREDICTED: chloroplastic group IIA intron sp... 99 2e-18
gb|AFW58511.1| CFM2 [Zea mays] 98 3e-18
gb|ABS89145.1| CFM2 [Zea mays] 98 3e-18
ref|XP_006653494.1| PREDICTED: uncharacterized protein LOC102722... 97 5e-18
ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron sp... 97 5e-18
ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron sp... 97 5e-18
gb|EOY02282.1| CRM family member 2, putative isoform 2 [Theobrom... 97 6e-18
gb|EOY02281.1| CRM family member 2, putative isoform 1 [Theobrom... 97 6e-18
dbj|BAK05795.1| predicted protein [Hordeum vulgare subsp. vulgare] 97 8e-18
emb|CBI34982.3| unnamed protein product [Vitis vinifera] 97 8e-18
ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp... 97 8e-18
gb|AAF24608.1|AC010870_1 unknown protein [Arabidopsis thaliana] 97 8e-18
ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana] gi|2... 97 8e-18
emb|CAD41031.1| OSJNBa0060P14.12 [Oryza sativa Japonica Group] g... 96 1e-17
>ref|XP_003554853.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Glycine max]
Length = 1027
Score = 101 bits (251), Expect = 3e-19
Identities = 48/104 (46%), Positives = 75/104 (72%)
Frame = +1
Query: 7 VYKMEKSDVTRMPLPLSNKQRLILRRQALKLKRPVQFHMGKKNVVQGLVDSICEYFKRHP 186
V M +++ + LSN++RL+LR+QALK+K+ +GK N+V GL +I +F++HP
Sbjct: 884 VRDMSSNELPSRSVYLSNRERLLLRKQALKMKKRPVLSVGKSNIVTGLAKAIKAHFQKHP 943
Query: 187 LILVSLKGRDKRTTMAEIASELTERTRSVLVSQETSKIILYRGW 318
L +V++KGR K T++ E+ S+L + T +VLVSQE +K+ILYRGW
Sbjct: 944 LAIVNVKGRAKGTSIQEVVSKLEQETGAVLVSQELNKVILYRGW 987
>ref|XP_006408495.1| hypothetical protein EUTSA_v10019986mg [Eutrema salsugineum]
gi|557109641|gb|ESQ49948.1| hypothetical protein
EUTSA_v10019986mg [Eutrema salsugineum]
Length = 998
Score = 100 bits (248), Expect = 8e-19
Identities = 49/99 (49%), Positives = 74/99 (74%)
Frame = +1
Query: 22 KSDVTRMPLPLSNKQRLILRRQALKLKRPVQFHMGKKNVVQGLVDSICEYFKRHPLILVS 201
KS+ + LSN++RLILR+QALK+K+ F +G+ NVV GL ++ +F+R+PL +V+
Sbjct: 850 KSEKDGLVADLSNRERLILRKQALKMKKRPPFAVGRSNVVTGLAKTLKIHFERNPLAIVN 909
Query: 202 LKGRDKRTTMAEIASELTERTRSVLVSQETSKIILYRGW 318
+KGR K T++ E+ ++L E T ++LVSQE SK+ILYRGW
Sbjct: 910 VKGRAKGTSVQEVIAKLKEETGALLVSQEPSKVILYRGW 948
>ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
splicing facilitator CRS1, chloroplastic-like [Cucumis
sativus]
Length = 1053
Score = 100 bits (248), Expect = 8e-19
Identities = 49/89 (55%), Positives = 68/89 (76%)
Frame = +1
Query: 52 LSNKQRLILRRQALKLKRPVQFHMGKKNVVQGLVDSICEYFKRHPLILVSLKGRDKRTTM 231
LSNK+RL+LRRQALK+K+ +GK NV+ G+ +I E+FK+H L +V++KGR K T++
Sbjct: 928 LSNKERLLLRRQALKMKKLPVLSVGKSNVITGVAKAIKEHFKKHSLAIVNVKGRAKGTSV 987
Query: 232 AEIASELTERTRSVLVSQETSKIILYRGW 318
EI +L + T +VLVSQE SK+ILYRGW
Sbjct: 988 QEIVFKLEQATGAVLVSQEPSKVILYRGW 1016
>ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Cucumis sativus]
Length = 1032
Score = 100 bits (248), Expect = 8e-19
Identities = 49/89 (55%), Positives = 68/89 (76%)
Frame = +1
Query: 52 LSNKQRLILRRQALKLKRPVQFHMGKKNVVQGLVDSICEYFKRHPLILVSLKGRDKRTTM 231
LSNK+RL+LRRQALK+K+ +GK NV+ G+ +I E+FK+H L +V++KGR K T++
Sbjct: 907 LSNKERLLLRRQALKMKKLPVLSVGKSNVITGVAKAIKEHFKKHSLAIVNVKGRAKGTSV 966
Query: 232 AEIASELTERTRSVLVSQETSKIILYRGW 318
EI +L + T +VLVSQE SK+ILYRGW
Sbjct: 967 QEIVFKLEQATGAVLVSQEPSKVILYRGW 995
>ref|XP_004489340.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X2 [Cicer arietinum]
Length = 834
Score = 99.0 bits (245), Expect = 2e-18
Identities = 48/91 (52%), Positives = 68/91 (74%)
Frame = +1
Query: 46 LPLSNKQRLILRRQALKLKRPVQFHMGKKNVVQGLVDSICEYFKRHPLILVSLKGRDKRT 225
L LSN++RL+LRRQAL +K+ +GK N V GL +I ++F++HP ++V++KGR K T
Sbjct: 704 LYLSNRERLLLRRQALNMKKRPLLAIGKSNTVTGLAKAIKDHFRKHPFVIVNVKGRAKGT 763
Query: 226 TMAEIASELTERTRSVLVSQETSKIILYRGW 318
++ E+ S+L T +VLVSQE SKIILYRGW
Sbjct: 764 SVHELVSKLEHATGAVLVSQEPSKIILYRGW 794
>ref|XP_004489339.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X1 [Cicer arietinum]
Length = 1019
Score = 99.0 bits (245), Expect = 2e-18
Identities = 48/91 (52%), Positives = 68/91 (74%)
Frame = +1
Query: 46 LPLSNKQRLILRRQALKLKRPVQFHMGKKNVVQGLVDSICEYFKRHPLILVSLKGRDKRT 225
L LSN++RL+LRRQAL +K+ +GK N V GL +I ++F++HP ++V++KGR K T
Sbjct: 889 LYLSNRERLLLRRQALNMKKRPLLAIGKSNTVTGLAKAIKDHFRKHPFVIVNVKGRAKGT 948
Query: 226 TMAEIASELTERTRSVLVSQETSKIILYRGW 318
++ E+ S+L T +VLVSQE SKIILYRGW
Sbjct: 949 SVHELVSKLEHATGAVLVSQEPSKIILYRGW 979
>ref|XP_004975884.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X1 [Setaria italica]
Length = 985
Score = 98.6 bits (244), Expect = 2e-18
Identities = 53/126 (42%), Positives = 78/126 (61%), Gaps = 4/126 (3%)
Frame = +1
Query: 49 PLSNKQRLILRRQALKLKRPVQFHMGKKNVVQGLVDSICEYFKRHPLILVSLKGRDKRTT 228
PL+N++RL+LR+QALK+K+ +G+ NV+ G+ +I +FK+HPL +V++K R T
Sbjct: 854 PLTNQERLMLRKQALKMKKKPVLSIGRNNVITGVAKTIKTHFKKHPLAIVNIKNRADGTP 913
Query: 229 MAEIASELTERTRSVLVSQETSKIILYRGW----LXXXXXXXXXXXXXXXXXXXXLLKAI 396
+ ++ SEL E T SVLVS+ET+K+ILYRGW LL+AI
Sbjct: 914 IQQLISELEEATGSVLVSRETNKVILYRGWGAEVAQKSSMENSANGEEKEVISPQLLEAI 973
Query: 397 QNECGL 414
+ ECGL
Sbjct: 974 RLECGL 979
>gb|AFW58511.1| CFM2 [Zea mays]
Length = 1039
Score = 98.2 bits (243), Expect = 3e-18
Identities = 55/141 (39%), Positives = 84/141 (59%), Gaps = 7/141 (4%)
Frame = +1
Query: 13 KMEKSDVTRMPL---PLSNKQRLILRRQALKLKRPVQFHMGKKNVVQGLVDSICEYFKRH 183
K++ ++ PL PLSN++RL+LR+QAL++K+ +G+ N + G+ +I +FK+H
Sbjct: 893 KLDAESLSVSPLRAAPLSNQERLVLRKQALQMKKRPVLSIGRNNAITGVAKTIKTHFKKH 952
Query: 184 PLILVSLKGRDKRTTMAEIASELTERTRSVLVSQETSKIILYRGW----LXXXXXXXXXX 351
PL +V++K R T + ++ SEL E T SVLVS+ET+K+ILYRGW
Sbjct: 953 PLAIVNIKNRADGTPIQQLISELEEATGSVLVSRETNKVILYRGWGAEVAQKSSRESSTD 1012
Query: 352 XXXXXXXXXXLLKAIQNECGL 414
LL+AI+ ECGL
Sbjct: 1013 EGEKEVISPQLLEAIRLECGL 1033
>gb|ABS89145.1| CFM2 [Zea mays]
Length = 942
Score = 98.2 bits (243), Expect = 3e-18
Identities = 55/141 (39%), Positives = 84/141 (59%), Gaps = 7/141 (4%)
Frame = +1
Query: 13 KMEKSDVTRMPL---PLSNKQRLILRRQALKLKRPVQFHMGKKNVVQGLVDSICEYFKRH 183
K++ ++ PL PLSN++RL+LR+QAL++K+ +G+ N + G+ +I +FK+H
Sbjct: 796 KLDAESLSVSPLRAAPLSNQERLVLRKQALQMKKRPVLSIGRNNAITGVAKTIKTHFKKH 855
Query: 184 PLILVSLKGRDKRTTMAEIASELTERTRSVLVSQETSKIILYRGW----LXXXXXXXXXX 351
PL +V++K R T + ++ SEL E T SVLVS+ET+K+ILYRGW
Sbjct: 856 PLAIVNIKNRADGTPIQQLISELEEATGSVLVSRETNKVILYRGWGAEVAQKSSRESSTD 915
Query: 352 XXXXXXXXXXLLKAIQNECGL 414
LL+AI+ ECGL
Sbjct: 916 EGEKEVISPQLLEAIRLECGL 936
>ref|XP_006653494.1| PREDICTED: uncharacterized protein LOC102722114 [Oryza brachyantha]
Length = 1344
Score = 97.4 bits (241), Expect = 5e-18
Identities = 53/126 (42%), Positives = 77/126 (61%), Gaps = 4/126 (3%)
Frame = +1
Query: 49 PLSNKQRLILRRQALKLKRPVQFHMGKKNVVQGLVDSICEYFKRHPLILVSLKGRDKRTT 228
PLSN++RL+LR+QALKLK+ +G+ NV+ G+ +I +FK+HPL +V++K R T
Sbjct: 1213 PLSNRERLMLRKQALKLKKRPVLAIGRNNVITGVAKTIKTHFKKHPLAIVNIKNRADGTP 1272
Query: 229 MAEIASELTERTRSVLVSQETSKIILYRGW----LXXXXXXXXXXXXXXXXXXXXLLKAI 396
+ ++ SEL E T S+LVS+E +K+ILYRGW LL+AI
Sbjct: 1273 IQQLISELEEATGSILVSREPNKVILYRGWGADVAQNSSNGTSTEQVEKEVISPQLLEAI 1332
Query: 397 QNECGL 414
+ ECGL
Sbjct: 1333 RLECGL 1338
>ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 1049
Score = 97.4 bits (241), Expect = 5e-18
Identities = 45/89 (50%), Positives = 69/89 (77%)
Frame = +1
Query: 52 LSNKQRLILRRQALKLKRPVQFHMGKKNVVQGLVDSICEYFKRHPLILVSLKGRDKRTTM 231
LSN++RL+LR+QALK+K+ +G+ N+V G+ +I E+FK++PL +V++KGR K T++
Sbjct: 908 LSNRERLLLRKQALKMKKQPVLAVGRSNIVTGVAKNIKEHFKKYPLAIVNVKGRAKGTSV 967
Query: 232 AEIASELTERTRSVLVSQETSKIILYRGW 318
E+ +L + T +VLVSQE SK+ILYRGW
Sbjct: 968 REVVFKLEQATGAVLVSQEPSKVILYRGW 996
>ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Solanum lycopersicum]
Length = 1049
Score = 97.4 bits (241), Expect = 5e-18
Identities = 45/89 (50%), Positives = 69/89 (77%)
Frame = +1
Query: 52 LSNKQRLILRRQALKLKRPVQFHMGKKNVVQGLVDSICEYFKRHPLILVSLKGRDKRTTM 231
LSN++RL+LR+QALK+K+ +G+ N+V G+ +I E+FK++PL +V++KGR K T++
Sbjct: 908 LSNRERLLLRKQALKMKKQPVLAVGRSNIVTGVAKNIKEHFKKYPLAIVNVKGRAKGTSV 967
Query: 232 AEIASELTERTRSVLVSQETSKIILYRGW 318
E+ +L + T +VLVSQE SK+ILYRGW
Sbjct: 968 REVVFKLEQATGAVLVSQEPSKVILYRGW 996
>gb|EOY02282.1| CRM family member 2, putative isoform 2 [Theobroma cacao]
Length = 1045
Score = 97.1 bits (240), Expect = 6e-18
Identities = 46/89 (51%), Positives = 67/89 (75%)
Frame = +1
Query: 52 LSNKQRLILRRQALKLKRPVQFHMGKKNVVQGLVDSICEYFKRHPLILVSLKGRDKRTTM 231
LSNK RL+LR+QALK+K+ +G+ N+V G+ +I +F++HPL +V++KGR K T++
Sbjct: 909 LSNKDRLLLRKQALKMKKRPVLAVGRSNIVTGVAKAIRAHFQKHPLAIVNVKGRAKGTSV 968
Query: 232 AEIASELTERTRSVLVSQETSKIILYRGW 318
E+ +L E T +VLVSQE SK+ILYRGW
Sbjct: 969 QEVVLKLQEATGAVLVSQEPSKVILYRGW 997
>gb|EOY02281.1| CRM family member 2, putative isoform 1 [Theobroma cacao]
Length = 1087
Score = 97.1 bits (240), Expect = 6e-18
Identities = 46/89 (51%), Positives = 67/89 (75%)
Frame = +1
Query: 52 LSNKQRLILRRQALKLKRPVQFHMGKKNVVQGLVDSICEYFKRHPLILVSLKGRDKRTTM 231
LSNK RL+LR+QALK+K+ +G+ N+V G+ +I +F++HPL +V++KGR K T++
Sbjct: 951 LSNKDRLLLRKQALKMKKRPVLAVGRSNIVTGVAKAIRAHFQKHPLAIVNVKGRAKGTSV 1010
Query: 232 AEIASELTERTRSVLVSQETSKIILYRGW 318
E+ +L E T +VLVSQE SK+ILYRGW
Sbjct: 1011 QEVVLKLQEATGAVLVSQEPSKVILYRGW 1039
>dbj|BAK05795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1070
Score = 96.7 bits (239), Expect = 8e-18
Identities = 54/140 (38%), Positives = 83/140 (59%), Gaps = 7/140 (5%)
Frame = +1
Query: 16 MEKSDVTRMP---LPLSNKQRLILRRQALKLKRPVQFHMGKKNVVQGLVDSICEYFKRHP 186
+++ R+P PLSN++RL+LR+QAL++K+ +G+ NV+ G+ +I +FK+HP
Sbjct: 925 LDQKHTPRLPSKAAPLSNRERLVLRKQALQMKKRPVLAIGRNNVITGVAKTIRTHFKKHP 984
Query: 187 LILVSLKGRDKRTTMAEIASELTERTRSVLVSQETSKIILYRGW----LXXXXXXXXXXX 354
L +V++K R T + ++ SEL E T SVLVS+E +K+ILYRGW
Sbjct: 985 LAVVNIKNRADGTPVQQLISELEEATGSVLVSREPNKVILYRGWGADATQTSSREDSTYV 1044
Query: 355 XXXXXXXXXLLKAIQNECGL 414
LL+AI+ ECGL
Sbjct: 1045 GEKEVISPQLLEAIRLECGL 1064
>emb|CBI34982.3| unnamed protein product [Vitis vinifera]
Length = 1028
Score = 96.7 bits (239), Expect = 8e-18
Identities = 44/90 (48%), Positives = 69/90 (76%)
Frame = +1
Query: 49 PLSNKQRLILRRQALKLKRPVQFHMGKKNVVQGLVDSICEYFKRHPLILVSLKGRDKRTT 228
PLSN++RL+LR+QAL++K+ +G+ N+V G+ +I +F++HPL +V++KGR K T+
Sbjct: 898 PLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTS 957
Query: 229 MAEIASELTERTRSVLVSQETSKIILYRGW 318
+ E+ +L + T +VLVSQE SK+ILYRGW
Sbjct: 958 VQEVIFKLEQATGAVLVSQEPSKVILYRGW 987
>ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Vitis vinifera]
Length = 1044
Score = 96.7 bits (239), Expect = 8e-18
Identities = 44/90 (48%), Positives = 69/90 (76%)
Frame = +1
Query: 49 PLSNKQRLILRRQALKLKRPVQFHMGKKNVVQGLVDSICEYFKRHPLILVSLKGRDKRTT 228
PLSN++RL+LR+QAL++K+ +G+ N+V G+ +I +F++HPL +V++KGR K T+
Sbjct: 898 PLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTS 957
Query: 229 MAEIASELTERTRSVLVSQETSKIILYRGW 318
+ E+ +L + T +VLVSQE SK+ILYRGW
Sbjct: 958 VQEVIFKLEQATGAVLVSQEPSKVILYRGW 987
>gb|AAF24608.1|AC010870_1 unknown protein [Arabidopsis thaliana]
Length = 1020
Score = 96.7 bits (239), Expect = 8e-18
Identities = 47/99 (47%), Positives = 73/99 (73%)
Frame = +1
Query: 22 KSDVTRMPLPLSNKQRLILRRQALKLKRPVQFHMGKKNVVQGLVDSICEYFKRHPLILVS 201
KS+ + LSN++RLILR+QALK+K+ F +G+ NVV GL ++ +F+++PL +V+
Sbjct: 874 KSENDGLVTDLSNRERLILRKQALKMKKRPPFAVGRSNVVTGLARTLKMHFQKNPLAIVN 933
Query: 202 LKGRDKRTTMAEIASELTERTRSVLVSQETSKIILYRGW 318
+KGR T++ E+ ++L E T ++LVSQE SK+ILYRGW
Sbjct: 934 VKGRANGTSVQEVIAKLKEETGALLVSQEPSKVILYRGW 972
>ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana] gi|22531018|gb|AAM97013.1|
unknown protein [Arabidopsis thaliana]
gi|37202002|gb|AAQ89616.1| At3g01370 [Arabidopsis
thaliana] gi|332640136|gb|AEE73657.1| CRM family member 2
[Arabidopsis thaliana]
Length = 1011
Score = 96.7 bits (239), Expect = 8e-18
Identities = 47/99 (47%), Positives = 73/99 (73%)
Frame = +1
Query: 22 KSDVTRMPLPLSNKQRLILRRQALKLKRPVQFHMGKKNVVQGLVDSICEYFKRHPLILVS 201
KS+ + LSN++RLILR+QALK+K+ F +G+ NVV GL ++ +F+++PL +V+
Sbjct: 865 KSENDGLVTDLSNRERLILRKQALKMKKRPPFAVGRSNVVTGLARTLKMHFQKNPLAIVN 924
Query: 202 LKGRDKRTTMAEIASELTERTRSVLVSQETSKIILYRGW 318
+KGR T++ E+ ++L E T ++LVSQE SK+ILYRGW
Sbjct: 925 VKGRANGTSVQEVIAKLKEETGALLVSQEPSKVILYRGW 963
>emb|CAD41031.1| OSJNBa0060P14.12 [Oryza sativa Japonica Group]
gi|32492164|emb|CAE04823.1| OSJNBb0048E02.3 [Oryza sativa
Japonica Group]
Length = 1012
Score = 96.3 bits (238), Expect = 1e-17
Identities = 46/100 (46%), Positives = 70/100 (70%)
Frame = +1
Query: 19 EKSDVTRMPLPLSNKQRLILRRQALKLKRPVQFHMGKKNVVQGLVDSICEYFKRHPLILV 198
+ S + PLSN++RL+LR+QALK+K+ +G+ NV+ G+ +I +FK+HPL +V
Sbjct: 870 KSSQLPSAAAPLSNRERLMLRKQALKMKKRPVLAVGRNNVITGVAKAIKTHFKKHPLAIV 929
Query: 199 SLKGRDKRTTMAEIASELTERTRSVLVSQETSKIILYRGW 318
++K R T + ++ SEL E T SVLVS+E +K+ILYRGW
Sbjct: 930 NIKNRADGTPIQQLISELEEATGSVLVSREPNKVILYRGW 969