BLASTX nr result
ID: Ephedra27_contig00018213
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra27_contig00018213 (597 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006845708.1| hypothetical protein AMTR_s00019p00240430 [A... 150 2e-34 ref|XP_003620948.1| Protein OSB3 [Medicago truncatula] gi|355495... 120 3e-25 ref|XP_006280485.1| hypothetical protein CARUB_v10026422mg [Caps... 116 5e-24 ref|NP_974885.1| protein OSB3 [Arabidopsis thaliana] gi|33200777... 112 8e-23 ref|NP_568639.1| protein OSB3 [Arabidopsis thaliana] gi|75328911... 111 2e-22 gb|AAM61481.1| unknown [Arabidopsis thaliana] 111 2e-22 ref|XP_002863546.1| hypothetical protein ARALYDRAFT_494502 [Arab... 109 5e-22 ref|XP_001703164.1| chloroplast-targeted RNA-binding protein [Ch... 107 2e-21 ref|XP_002330744.1| predicted protein [Populus trichocarpa] 102 1e-19 ref|XP_002327104.1| predicted protein [Populus trichocarpa] gi|5... 100 2e-19 gb|EXB42196.1| hypothetical protein L484_001276 [Morus notabilis] 95 1e-17 ref|XP_006393529.1| hypothetical protein EUTSA_v10011640mg [Eutr... 95 1e-17 ref|XP_002529526.1| hypothetical protein RCOM_1716690 [Ricinus c... 95 2e-17 ref|XP_006398112.1| hypothetical protein EUTSA_v10000889mg [Eutr... 91 2e-16 ref|XP_004513105.1| PREDICTED: protein OSB2, chloroplastic-like ... 91 2e-16 ref|XP_002869952.1| hypothetical protein ARALYDRAFT_492872 [Arab... 89 9e-16 ref|XP_002510278.1| conserved hypothetical protein [Ricinus comm... 89 9e-16 ref|XP_002953456.1| hypothetical protein VOLCADRAFT_82305 [Volvo... 89 1e-15 ref|XP_006413910.1| hypothetical protein EUTSA_v10025547mg [Eutr... 88 2e-15 ref|NP_001031674.1| plastid transcriptionally active 9 [Arabidop... 88 2e-15 >ref|XP_006845708.1| hypothetical protein AMTR_s00019p00240430 [Amborella trichopoda] gi|548848280|gb|ERN07383.1| hypothetical protein AMTR_s00019p00240430 [Amborella trichopoda] Length = 500 Score = 150 bits (380), Expect = 2e-34 Identities = 76/172 (44%), Positives = 103/172 (59%), Gaps = 4/172 (2%) Frame = +2 Query: 2 KWFDNRKTKKSSTHPDFVHKSTHKSLWIEDFKTPTWVAPMLNNLQ-DKREN---LWNNYF 169 KW DNRK K THPDF HK T ++LW++ K WV L L+ D+R++ LW + F Sbjct: 313 KWCDNRKVKTQPTHPDFKHKETGEALWLDGPKAE-WVLSKLKTLEIDQRQDKGHLWEDLF 371 Query: 170 TDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISMLDKLKNDASSASQTTE 349 DPSKW DNRK+K HPDF HK+T +ALW++ + P WV+S L L+ D ++ + Sbjct: 372 ADPSKWCDNRKVKTQPTHPDFKHKETGEALWLDGIK-PEWVLSKLKTLEIDQRQ-NKDSN 429 Query: 350 NLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTPAWVIPML 505 +LWK A+ +W+D R K K PDF HKD K LW++ TP W + L Sbjct: 430 DLWKDLVANRDKWWDNRLSKVNPKAPDFKHKDSGKGLWLNG-STPDWALTNL 480 Score = 148 bits (373), Expect = 1e-33 Identities = 75/211 (35%), Positives = 119/211 (56%), Gaps = 14/211 (6%) Frame = +2 Query: 5 WFDNRKTKKSSTHPDFVHKSTHKSLWIED---------FKTPTWVAPMLNNLQDKR---- 145 W+DNR K++ +PDF +K++ ++LW++ ++P + A N + ++ Sbjct: 240 WYDNRFDKRNPRYPDFRNKNSKEALWLDKHTPDSVLSALESPEFCAKFANGQKIEKIRAD 299 Query: 146 -ENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISMLDKLKND 322 + W + F DPSKW DNRK+K HPDF HK+T +ALW++ + WV+S L L+ D Sbjct: 300 IGHRWEDLFADPSKWCDNRKVKTQPTHPDFKHKETGEALWLDGPK-AEWVLSKLKTLEID 358 Query: 323 ASSASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTPAWVIPM 502 Q +LW+ FA PS+W D RK+K + HPDF HK+ +ALW+D ++ P WV+ Sbjct: 359 QR---QDKGHLWEDLFADPSKWCDNRKVKTQPTHPDFKHKETGEALWLDGIK-PEWVLSK 414 Query: 503 LNNLQVEAFSAPLSVETLWIAYFSDPSKWFD 595 L L+++ S LW ++ KW+D Sbjct: 415 LKTLEIDQRQNKDS-NDLWKDLVANRDKWWD 444 Score = 108 bits (270), Expect = 1e-21 Identities = 58/158 (36%), Positives = 86/158 (54%), Gaps = 8/158 (5%) Frame = +2 Query: 146 ENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISMLDKLKNDA 325 E LW F P W+DNR K++ +PDF +K++ +ALW++ P V+S L+ + A Sbjct: 227 EGLWKELFAKPYNWYDNRFDKRNPRYPDFRNKNSKEALWLDK-HTPDSVLSALESPEFCA 285 Query: 326 SSAS-QTTENL-------WKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRT 481 A+ Q E + W+ FA PS+W D RK+K + HPDF HK+ +ALW+D + Sbjct: 286 KFANGQKIEKIRADIGHRWEDLFADPSKWCDNRKVKTQPTHPDFKHKETGEALWLDGPKA 345 Query: 482 PAWVIPMLNNLQVEAFSAPLSVETLWIAYFSDPSKWFD 595 WV+ L L+++ LW F+DPSKW D Sbjct: 346 -EWVLSKLKTLEIDQRQ---DKGHLWEDLFADPSKWCD 379 Score = 92.8 bits (229), Expect = 6e-17 Identities = 48/119 (40%), Positives = 65/119 (54%), Gaps = 6/119 (5%) Frame = +2 Query: 2 KWFDNRKTKKSSTHPDFVHKSTHKSLWIEDFKTPTWVAPMLNNLQ-DKREN-----LWNN 163 KW DNRK K THPDF HK T ++LW++ K P WV L L+ D+R+N LW + Sbjct: 376 KWCDNRKVKTQPTHPDFKHKETGEALWLDGIK-PEWVLSKLKTLEIDQRQNKDSNDLWKD 434 Query: 164 YFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISMLDKLKNDASSASQ 340 + KW+DNR K + PDF HKD+ LW+ N P W ++ L K +A + Sbjct: 435 LVANRDKWWDNRLSKVNPKAPDFKHKDSGKGLWL-NGSTPDWALTNLTPSKAKEEAADE 492 Score = 64.7 bits (156), Expect = 2e-08 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 9/101 (8%) Frame = +2 Query: 320 DASSASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDD--------- 472 D + E LWK FA P W+D R K+ ++PDF +K+ +ALW+D Sbjct: 218 DKVQKAVAVEGLWKELFAKPYNWYDNRFDKRNPRYPDFRNKNSKEALWLDKHTPDSVLSA 277 Query: 473 LRTPAWVIPMLNNLQVEAFSAPLSVETLWIAYFSDPSKWFD 595 L +P + N ++E A + W F+DPSKW D Sbjct: 278 LESPEFCAKFANGQKIEKIRADIGHR--WEDLFADPSKWCD 316 >ref|XP_003620948.1| Protein OSB3 [Medicago truncatula] gi|355495963|gb|AES77166.1| Protein OSB3 [Medicago truncatula] Length = 491 Score = 120 bits (301), Expect = 3e-25 Identities = 72/211 (34%), Positives = 112/211 (53%), Gaps = 24/211 (11%) Frame = +2 Query: 2 KWFDNRKTKKSST----HPDFVHKSTHKSLWIE-------------DFKTPTWVAPMLNN 130 KW+D R +K++ + +PDF K + S+W++ +F TP V P Sbjct: 287 KWWDFRDSKRNGSVNPKYPDFKRKDGNVSIWLDKASKSVLSRLKELEFDTPP-VKPKQTK 345 Query: 131 LQDKRENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISMLDK 310 K + WN+ +P+KW+DNR KK PDF HKDT LW+ + +P+WV S L + Sbjct: 346 -DSKGDESWNDLLQNPAKWWDNRVDKKYARAPDFKHKDTGVGLWLRD--SPSWVSSRLKE 402 Query: 311 LKNDASSA-------SQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWID 469 L+ +++S S+ ++ W +P++W+D R KK K PDF HKD +ALW+ Sbjct: 403 LEVESTSVKSKQAKDSKGSDESWNDLLQNPAKWWDNRLDKKNPKGPDFKHKDTGEALWLR 462 Query: 470 DLRTPAWVIPMLNNLQVEAFSAPLSVETLWI 562 +P+WV+P L L+ + SA ET W+ Sbjct: 463 G--SPSWVLPKLPPLKPKQQSA----ETSWM 487 Score = 85.1 bits (209), Expect = 1e-14 Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 17/164 (10%) Frame = +2 Query: 155 WNNYFTDPSKWFDNRKIKKSNN----HPDFVHKDTHDALWIENTRNPTWVISMLDKLKND 322 W + DP KW+D R K++ + +PDF KD + ++W++ V+S L +L+ D Sbjct: 278 WGDLLDDPKKWWDFRDSKRNGSVNPKYPDFKRKDGNVSIWLDKASKS--VLSRLKELEFD 335 Query: 323 A------SSASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTP 484 + + W +P++W+D R KK + PDF HKD LW+ D +P Sbjct: 336 TPPVKPKQTKDSKGDESWNDLLQNPAKWWDNRVDKKYARAPDFKHKDTGVGLWLRD--SP 393 Query: 485 AWVIPMLNNLQVEAFSA-------PLSVETLWIAYFSDPSKWFD 595 +WV L L+VE+ S + W +P+KW+D Sbjct: 394 SWVSSRLKELEVESTSVKSKQAKDSKGSDESWNDLLQNPAKWWD 437 >ref|XP_006280485.1| hypothetical protein CARUB_v10026422mg [Capsella rubella] gi|482549189|gb|EOA13383.1| hypothetical protein CARUB_v10026422mg [Capsella rubella] Length = 437 Score = 116 bits (290), Expect = 5e-24 Identities = 69/197 (35%), Positives = 93/197 (47%), Gaps = 25/197 (12%) Frame = +2 Query: 2 KWFDNRKTKKSST----HPDFVHKSTHKSLWIEDFKTPTWVAPMLNNL------------ 133 +WFD+R K + HPDF K+ SLW+ P W L+ L Sbjct: 238 EWFDHRGNKANGLVKPKHPDFKRKAGGLSLWLST--VPDWALLKLDELEFDVFVPNGDIK 295 Query: 134 --QDKRENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISMLD 307 Q K E W + +P KWFDNR K + PDF HK+T +ALW+ T +P WV+S L Sbjct: 296 LKQLKGEESWKDLVQNPDKWFDNRSEKTNVKAPDFKHKETGEALWM--TDSPIWVLSKLP 353 Query: 308 KLKNDASSASQTT-------ENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWI 466 LK + + E WK PS+W+D R K+ K PDF HK+ +ALWI Sbjct: 354 PLKKNQERPLMSNTVSLHKKEESWKNLVEDPSKWWDNRVDKRNPKGPDFKHKETGEALWI 413 Query: 467 DDLRTPAWVIPMLNNLQ 517 +P W + L L+ Sbjct: 414 SS--SPTWALSELPPLE 428 Score = 96.7 bits (239), Expect = 4e-18 Identities = 50/121 (41%), Positives = 69/121 (57%), Gaps = 14/121 (11%) Frame = +2 Query: 2 KWFDNRKTKKSSTHPDFVHKSTHKSLWIEDFKTPTWVA------------PMLNNLQD-- 139 KWFDNR K + PDF HK T ++LW+ D +P WV P+++N Sbjct: 314 KWFDNRSEKTNVKAPDFKHKETGEALWMTD--SPIWVLSKLPPLKKNQERPLMSNTVSLH 371 Query: 140 KRENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISMLDKLKN 319 K+E W N DPSKW+DNR K++ PDF HK+T +ALWI + +PTW +S L L+ Sbjct: 372 KKEESWKNLVEDPSKWWDNRVDKRNPKGPDFKHKETGEALWISS--SPTWALSELPPLEK 429 Query: 320 D 322 + Sbjct: 430 N 430 Score = 94.0 bits (232), Expect = 3e-17 Identities = 55/173 (31%), Positives = 80/173 (46%), Gaps = 18/173 (10%) Frame = +2 Query: 131 LQDKRENLWNNYFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALWIENTRNPTWVIS 298 + ++ N W + +P +WFD+R K + HPDF K +LW+ P W + Sbjct: 221 IDEETSNSWKHLIENPKEWFDHRGNKANGLVKPKHPDFKRKAGGLSLWLSTV--PDWALL 278 Query: 299 MLDKLK-------NDASSASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKA 457 LD+L+ D E WK +P +WFD R K K PDF HK+ +A Sbjct: 279 KLDELEFDVFVPNGDIKLKQLKGEESWKDLVQNPDKWFDNRSEKTNVKAPDFKHKETGEA 338 Query: 458 LWIDDLRTPAWVI----PMLNNLQVEAFSAPLSV---ETLWIAYFSDPSKWFD 595 LW+ D +P WV+ P+ N + S +S+ E W DPSKW+D Sbjct: 339 LWMTD--SPIWVLSKLPPLKKNQERPLMSNTVSLHKKEESWKNLVEDPSKWWD 389 >ref|NP_974885.1| protein OSB3 [Arabidopsis thaliana] gi|332007778|gb|AED95161.1| protein OSB3 [Arabidopsis thaliana] Length = 442 Score = 112 bits (280), Expect = 8e-23 Identities = 71/213 (33%), Positives = 99/213 (46%), Gaps = 41/213 (19%) Frame = +2 Query: 2 KWFDNRKTKKSST----HPDFVHKSTHKSLWIEDFKTPTW------------VAPM---- 121 +W D+R K + HPDF K SLW+ P W + P Sbjct: 227 EWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLST--APDWALLKLEELKFDVLVPKGNIK 284 Query: 122 LNNLQDKRENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISM 301 LN L+D E W + +P KW DNR K + +PDF HK+T +ALW+ T +P WV+S Sbjct: 285 LNQLKDIGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWM--TNSPIWVLSK 342 Query: 302 LDKLKND------ASSASQ---------------TTENLWKAFFAHPSRWFDKRKIKKRD 418 L LK + ++ SQ E +WK +PS+W+D R K+ Sbjct: 343 LPPLKKNQERPFMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNP 402 Query: 419 KHPDFTHKDCNKALWIDDLRTPAWVIPMLNNLQ 517 K PDF HK+ +ALWI D +P W + L L+ Sbjct: 403 KGPDFKHKETGEALWIGD--SPTWALSKLPPLK 433 Score = 90.9 bits (224), Expect = 2e-16 Identities = 50/135 (37%), Positives = 68/135 (50%), Gaps = 28/135 (20%) Frame = +2 Query: 2 KWFDNRKTKKSSTHPDFVHKSTHKSLWIEDFKTPTWV----------------------- 112 KW DNR K + +PDF HK T ++LW+ + +P WV Sbjct: 305 KWLDNRSDKTNVKYPDFKHKETGEALWMTN--SPIWVLSKLPPLKKNQERPFMSNKVSQL 362 Query: 113 -----APMLNNLQDKRENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTR 277 P N Q KRE +W N +PSKW+DNR K++ PDF HK+T +ALWI + Sbjct: 363 ELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIGD-- 420 Query: 278 NPTWVISMLDKLKND 322 +PTW +S L LK + Sbjct: 421 SPTWALSKLPPLKKN 435 Score = 82.0 bits (201), Expect = 1e-13 Identities = 52/189 (27%), Positives = 79/189 (41%), Gaps = 34/189 (17%) Frame = +2 Query: 131 LQDKRENLWNNYFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALWIENTRNPTWVIS 298 + ++ N W + +P +W D+R K + HPDF K +LW+ P W + Sbjct: 210 IDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLSTA--PDWALL 267 Query: 299 MLDKLKNDA---------SSASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCN 451 L++LK D + E WK +P +W D R K K+PDF HK+ Sbjct: 268 KLEELKFDVLVPKGNIKLNQLKDIGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETG 327 Query: 452 KALWIDDLRTPAWV---IPMLNNLQVEAFSA------------------PLSVETLWIAY 568 +ALW+ + +P WV +P L Q F + L E +W Sbjct: 328 EALWMTN--SPIWVLSKLPPLKKNQERPFMSNKVSQLELDVEVPKGNLKQLKREEIWKNL 385 Query: 569 FSDPSKWFD 595 +PSKW+D Sbjct: 386 VENPSKWWD 394 >ref|NP_568639.1| protein OSB3 [Arabidopsis thaliana] gi|75328911|sp|Q8GWJ4.1|OSB3_ARATH RecName: Full=Protein OSB3, chloroplastic/mitochondrial; AltName: Full=Organellar single-stranded DNA-binding protein 3; Flags: Precursor gi|26452626|dbj|BAC43396.1| unknown protein [Arabidopsis thaliana] gi|28973013|gb|AAO63831.1| unknown protein [Arabidopsis thaliana] gi|30102734|gb|AAP21285.1| At5g44785 [Arabidopsis thaliana] gi|110743279|dbj|BAE99530.1| hypothetical protein [Arabidopsis thaliana] gi|332007779|gb|AED95162.1| protein OSB3 [Arabidopsis thaliana] Length = 440 Score = 111 bits (277), Expect = 2e-22 Identities = 70/211 (33%), Positives = 96/211 (45%), Gaps = 39/211 (18%) Frame = +2 Query: 2 KWFDNRKTKKSST----HPDFVHKSTHKSLWIEDFKTPTWVAPMLNNL------------ 133 +W D+R K + HPDF K SLW+ P W L L Sbjct: 227 EWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLST--APDWALLKLEELKFDVLVPKGNIK 284 Query: 134 --QDKRENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISMLD 307 Q K E W + +P KW DNR K + +PDF HK+T +ALW+ N+ P WV+S L Sbjct: 285 LNQLKGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWMTNS--PIWVLSKLP 342 Query: 308 KLKND------ASSASQTT---------------ENLWKAFFAHPSRWFDKRKIKKRDKH 424 LK + ++ SQ E +WK +PS+W+D R K+ K Sbjct: 343 PLKKNQERPFMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKG 402 Query: 425 PDFTHKDCNKALWIDDLRTPAWVIPMLNNLQ 517 PDF HK+ +ALWI D +P W + L L+ Sbjct: 403 PDFKHKETGEALWIGD--SPTWALSKLPPLK 431 Score = 90.9 bits (224), Expect = 2e-16 Identities = 50/135 (37%), Positives = 68/135 (50%), Gaps = 28/135 (20%) Frame = +2 Query: 2 KWFDNRKTKKSSTHPDFVHKSTHKSLWIEDFKTPTWV----------------------- 112 KW DNR K + +PDF HK T ++LW+ + +P WV Sbjct: 303 KWLDNRSDKTNVKYPDFKHKETGEALWMTN--SPIWVLSKLPPLKKNQERPFMSNKVSQL 360 Query: 113 -----APMLNNLQDKRENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTR 277 P N Q KRE +W N +PSKW+DNR K++ PDF HK+T +ALWI + Sbjct: 361 ELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIGD-- 418 Query: 278 NPTWVISMLDKLKND 322 +PTW +S L LK + Sbjct: 419 SPTWALSKLPPLKKN 433 Score = 80.9 bits (198), Expect = 2e-13 Identities = 52/187 (27%), Positives = 78/187 (41%), Gaps = 32/187 (17%) Frame = +2 Query: 131 LQDKRENLWNNYFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALWIENTRNPTWVIS 298 + ++ N W + +P +W D+R K + HPDF K +LW+ P W + Sbjct: 210 IDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLSTA--PDWALL 267 Query: 299 MLDKLKNDASSASQTT-------ENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKA 457 L++LK D E WK +P +W D R K K+PDF HK+ +A Sbjct: 268 KLEELKFDVLVPKGNIKLNQLKGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEA 327 Query: 458 LWIDDLRTPAWV---IPMLNNLQVEAFSA------------------PLSVETLWIAYFS 574 LW+ + +P WV +P L Q F + L E +W Sbjct: 328 LWMTN--SPIWVLSKLPPLKKNQERPFMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVE 385 Query: 575 DPSKWFD 595 +PSKW+D Sbjct: 386 NPSKWWD 392 >gb|AAM61481.1| unknown [Arabidopsis thaliana] Length = 440 Score = 111 bits (277), Expect = 2e-22 Identities = 70/211 (33%), Positives = 96/211 (45%), Gaps = 39/211 (18%) Frame = +2 Query: 2 KWFDNRKTKKSST----HPDFVHKSTHKSLWIEDFKTPTWVAPMLNNL------------ 133 +W D+R K + HPDF K SLW+ P W L L Sbjct: 227 EWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLST--APDWALLKLEELKFDVLVPKGNIK 284 Query: 134 --QDKRENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISMLD 307 Q K E W + +P KW DNR K + +PDF HK+T +ALW+ N+ P WV+S L Sbjct: 285 LNQLKGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWMTNS--PIWVLSKLP 342 Query: 308 KLKND------ASSASQTT---------------ENLWKAFFAHPSRWFDKRKIKKRDKH 424 LK + ++ SQ E +WK +PS+W+D R K+ K Sbjct: 343 PLKKNQERPLMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKG 402 Query: 425 PDFTHKDCNKALWIDDLRTPAWVIPMLNNLQ 517 PDF HK+ +ALWI D +P W + L L+ Sbjct: 403 PDFKHKETGEALWIGD--SPTWALSKLPPLK 431 Score = 91.3 bits (225), Expect = 2e-16 Identities = 50/135 (37%), Positives = 71/135 (52%), Gaps = 28/135 (20%) Frame = +2 Query: 2 KWFDNRKTKKSSTHPDFVHKSTHKSLWIEDFKTPTWVA------------PMLNNL---- 133 KW DNR K + +PDF HK T ++LW+ + +P WV P+++N Sbjct: 303 KWLDNRSDKTNVKYPDFKHKETGEALWMTN--SPIWVLSKLPPLKKNQERPLMSNKVSQL 360 Query: 134 ------------QDKRENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTR 277 Q KRE +W N +PSKW+DNR K++ PDF HK+T +ALWI + Sbjct: 361 ELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIGD-- 418 Query: 278 NPTWVISMLDKLKND 322 +PTW +S L LK + Sbjct: 419 SPTWALSKLPPLKKN 433 Score = 81.6 bits (200), Expect = 1e-13 Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 32/187 (17%) Frame = +2 Query: 131 LQDKRENLWNNYFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALWIENTRNPTWVIS 298 + ++ N W + +P +W D+R K + HPDF K +LW+ P W + Sbjct: 210 IDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLSTA--PDWALL 267 Query: 299 MLDKLKNDASSASQTT-------ENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKA 457 L++LK D E WK +P +W D R K K+PDF HK+ +A Sbjct: 268 KLEELKFDVLVPKGNIKLNQLKGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEA 327 Query: 458 LWIDDLRTPAWVI------------PMLNN------LQVEAFSA---PLSVETLWIAYFS 574 LW+ + +P WV+ P+++N L VE L E +W Sbjct: 328 LWMTN--SPIWVLSKLPPLKKNQERPLMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVE 385 Query: 575 DPSKWFD 595 +PSKW+D Sbjct: 386 NPSKWWD 392 >ref|XP_002863546.1| hypothetical protein ARALYDRAFT_494502 [Arabidopsis lyrata subsp. lyrata] gi|297309381|gb|EFH39805.1| hypothetical protein ARALYDRAFT_494502 [Arabidopsis lyrata subsp. lyrata] Length = 441 Score = 109 bits (273), Expect = 5e-22 Identities = 67/211 (31%), Positives = 93/211 (44%), Gaps = 39/211 (18%) Frame = +2 Query: 2 KWFDNRKTKKSST----HPDFVHKSTHKSLWIEDFKTPTWVAPMLNNL------------ 133 +W D+R K + HPDF K SLW+ P W P L L Sbjct: 227 EWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLST--APDWALPKLKELEFDVLVPKGNIK 284 Query: 134 --QDKRENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISMLD 307 Q K E W + +P KW DNR K + +PDF HK+T +ALW+ T +P WV+S L Sbjct: 285 LNQLKGEESWKDLVQNPDKWLDNRLDKTNVKYPDFKHKETGEALWM--TNSPIWVLSKLP 342 Query: 308 KLKNDASSASQTT---------------------ENLWKAFFAHPSRWFDKRKIKKRDKH 424 LK + + E WK +PS+W+D R K+ K Sbjct: 343 PLKKNQERPLMSNTVPQLELDVVVPNGNLTQLKREESWKNLVENPSKWWDNRLDKRNPKA 402 Query: 425 PDFTHKDCNKALWIDDLRTPAWVIPMLNNLQ 517 PDF HK+ + LWI++ +P W + L L+ Sbjct: 403 PDFKHKETGEVLWINN-NSPTWALSKLPPLK 432 Score = 90.9 bits (224), Expect = 2e-16 Identities = 50/135 (37%), Positives = 69/135 (51%), Gaps = 28/135 (20%) Frame = +2 Query: 2 KWFDNRKTKKSSTHPDFVHKSTHKSLWIEDFKTPTWVA------------PMLNNL---- 133 KW DNR K + +PDF HK T ++LW+ + +P WV P+++N Sbjct: 303 KWLDNRLDKTNVKYPDFKHKETGEALWMTN--SPIWVLSKLPPLKKNQERPLMSNTVPQL 360 Query: 134 ------------QDKRENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTR 277 Q KRE W N +PSKW+DNR K++ PDF HK+T + LWI N Sbjct: 361 ELDVVVPNGNLTQLKREESWKNLVENPSKWWDNRLDKRNPKAPDFKHKETGEVLWI-NNN 419 Query: 278 NPTWVISMLDKLKND 322 +PTW +S L LK + Sbjct: 420 SPTWALSKLPPLKKN 434 Score = 75.9 bits (185), Expect = 8e-12 Identities = 50/187 (26%), Positives = 80/187 (42%), Gaps = 32/187 (17%) Frame = +2 Query: 131 LQDKRENLWNNYFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALWIENTRNPTWVIS 298 + ++ N W + +P +W D+R K + HPDF K +LW+ P W + Sbjct: 210 IDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLSTA--PDWALP 267 Query: 299 MLDKL-------KNDASSASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKA 457 L +L K + E WK +P +W D R K K+PDF HK+ +A Sbjct: 268 KLKELEFDVLVPKGNIKLNQLKGEESWKDLVQNPDKWLDNRLDKTNVKYPDFKHKETGEA 327 Query: 458 LWIDDLRTPAWVI------------PMLNN----LQVEAF-----SAPLSVETLWIAYFS 574 LW+ + +P WV+ P+++N L+++ L E W Sbjct: 328 LWMTN--SPIWVLSKLPPLKKNQERPLMSNTVPQLELDVVVPNGNLTQLKREESWKNLVE 385 Query: 575 DPSKWFD 595 +PSKW+D Sbjct: 386 NPSKWWD 392 >ref|XP_001703164.1| chloroplast-targeted RNA-binding protein [Chlamydomonas reinhardtii] gi|37545634|gb|AAM76787.1| RNA-binding protein RB38 [Chlamydomonas reinhardtii] gi|37723144|gb|AAP30010.1| 38 kDa RNA-binding protein [Chlamydomonas reinhardtii] gi|158270704|gb|EDO96540.1| chloroplast-targeted RNA-binding protein [Chlamydomonas reinhardtii] Length = 382 Score = 107 bits (267), Expect = 2e-21 Identities = 74/278 (26%), Positives = 113/278 (40%), Gaps = 80/278 (28%) Frame = +2 Query: 2 KWFDNRKTKKSSTHPDFVHKSTHK-SLWIEDFKTPTWVAPMLNNLQDKRENL-------- 154 +W+DNR K + PDFV K +LWI+ PTWV +L++L ++ N Sbjct: 56 EWYDNRTRKTNPKAPDFVRKDDRAVALWIDGRDVPTWVEELLHDLDSRQVNRRQQRDSES 115 Query: 155 -------------------------WNNYFTDPSKWFDNRKIKKSNNHPDFVHK-DTHDA 256 W ++P +W+DNR K S+ PDFV + D + A Sbjct: 116 GDERGGRGERRSGPGGGRQAAEAANWEALRSNPDEWYDNRNRKTSDRQPDFVRRDDRNSA 175 Query: 257 LWIENTRNPTWVISMLDKL----------------------KNDASSASQTTENL--WKA 364 LW+++ P WV +L +L + + + E L W++ Sbjct: 176 LWLDSRGVPEWVDELLAELDERQAARREQRVAERAAGGGDERQEGGGGRRGAEELANWES 235 Query: 365 FFAHPSRWFDKRKIKKRDKHPDFTHKDCNK-ALWIDDLRTPAWVIPMLNNL--------- 514 A+P W+D R K D+ PDF +D + ALW+D P WV +L L Sbjct: 236 LRANPIEWYDNRSRKTSDRQPDFVRRDDRRAALWLDSRGAPPWVGDLLAELDAAAQARRQ 295 Query: 515 --QVEAFSAPLSVE---------TLWIAYFSDPSKWFD 595 Q E +AP + E W + ++P WFD Sbjct: 296 QRQAERSAAPSTPELEAKRAAEAANWESLRANPEAWFD 333 Score = 102 bits (253), Expect = 1e-19 Identities = 67/225 (29%), Positives = 98/225 (43%), Gaps = 54/225 (24%) Frame = +2 Query: 2 KWFDNRKTKKSSTHPDFVHKSTHKS-LWIEDFKTPTWVAPMLNNLQDKR----------- 145 +W+DNR K S PDFV + S LW++ P WV +L L +++ Sbjct: 150 EWYDNRNRKTSDRQPDFVRRDDRNSALWLDSRGVPEWVDELLAELDERQAARREQRVAER 209 Query: 146 ------------------ENL--WNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDA-LW 262 E L W + +P +W+DNR K S+ PDFV +D A LW Sbjct: 210 AAGGGDERQEGGGGRRGAEELANWESLRANPIEWYDNRSRKTSDRQPDFVRRDDRRAALW 269 Query: 263 IENTRNPTWVISMLDKLKNDAS----------SASQTTENL----------WKAFFAHPS 382 +++ P WV +L +L A SA+ +T L W++ A+P Sbjct: 270 LDSRGAPPWVGDLLAELDAAAQARRQQRQAERSAAPSTPELEAKRAAEAANWESLRANPE 329 Query: 383 RWFDKRKIKKRDKHPDFTHK-DCNKALWIDDLRTPAWVIPMLNNL 514 WFD R K+ K PDF K D +ALW+ P W+ +L+ L Sbjct: 330 AWFDNRNNKQTPKSPDFRKKDDRTQALWVTSYGAPEWLNELLSEL 374 >ref|XP_002330744.1| predicted protein [Populus trichocarpa] Length = 354 Score = 102 bits (253), Expect = 1e-19 Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 10/129 (7%) Frame = +2 Query: 149 NLWNNYFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALWIENTRNPTWVISMLDKLK 316 N W + +P++W+D R K+S HPDF HK+ + ++W+ T P+W+ S L+K+K Sbjct: 206 NSWTDLLENPNQWWDYRSSKRSGLVKPKHPDFKHKNNNQSVWL--TGAPSWIFSGLEKVK 263 Query: 317 NDASSA------SQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLR 478 D +A Q E WK +P +W+D R KK K PDF HK+ + LW+D Sbjct: 264 FDVKTALPTQTKQQKEEECWKDLVENPHKWWDNRVDKKNPKSPDFKHKETGEGLWLD--T 321 Query: 479 TPAWVIPML 505 +PAWV+P L Sbjct: 322 SPAWVLPKL 330 Score = 80.9 bits (198), Expect = 2e-13 Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 17/122 (13%) Frame = +2 Query: 2 KWFDNRKTKKSST----HPDFVHKSTHKSLWIEDFKTPTWVAPMLNNL------------ 133 +W+D R +K+S HPDF HK+ ++S+W+ P+W+ L + Sbjct: 217 QWWDYRSSKRSGLVKPKHPDFKHKNNNQSVWLTG--APSWIFSGLEKVKFDVKTALPTQT 274 Query: 134 -QDKRENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISMLDK 310 Q K E W + +P KW+DNR KK+ PDF HK+T + LW++ +P WV+ L Sbjct: 275 KQQKEEECWKDLVENPHKWWDNRVDKKNPKSPDFKHKETGEGLWLDT--SPAWVLPKLPP 332 Query: 311 LK 316 K Sbjct: 333 TK 334 >ref|XP_002327104.1| predicted protein [Populus trichocarpa] gi|566202259|ref|XP_006375003.1| hypothetical protein POPTR_0014s03490g [Populus trichocarpa] gi|550323317|gb|ERP52800.1| hypothetical protein POPTR_0014s03490g [Populus trichocarpa] Length = 371 Score = 100 bits (250), Expect = 2e-19 Identities = 49/119 (41%), Positives = 66/119 (55%), Gaps = 5/119 (4%) Frame = +2 Query: 152 LWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISMLDKLKNDASS 331 LW +F+ P +W+DNRK KK++ PDF HK + DALW+ +P W+ + L L A Sbjct: 224 LWKAFFSSPHEWWDNRKFKKNSKLPDFKHKISGDALWLRPD-DPLWIKTKLQLLDWKAGE 282 Query: 332 ASQTTEN-----LWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTPAWV 493 + + LW+ FFA P W+D RK KK PDF HKD +ALW+ P WV Sbjct: 283 HCEEERHKNHLYLWQVFFASPHEWWDNRKNKKNSASPDFKHKDTGEALWLSP-NDPPWV 340 Score = 87.8 bits (216), Expect = 2e-15 Identities = 47/117 (40%), Positives = 68/117 (58%), Gaps = 15/117 (12%) Frame = +2 Query: 2 KWFDNRKTKKSSTHPDFVHKSTHKSLWIEDFKTPTWVAPMLNNL---------QDKREN- 151 +W+DNRK KK+S PDF HK + +LW+ P W+ L L +++ +N Sbjct: 234 EWWDNRKFKKNSKLPDFKHKISGDALWLRP-DDPLWIKTKLQLLDWKAGEHCEEERHKNH 292 Query: 152 --LWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWV---ISMLD 307 LW +F P +W+DNRK KK++ PDF HKDT +ALW+ + +P WV I +LD Sbjct: 293 LYLWQVFFASPHEWWDNRKNKKNSASPDFKHKDTGEALWL-SPNDPPWVKRQIQLLD 348 Score = 63.5 bits (153), Expect = 4e-08 Identities = 36/91 (39%), Positives = 46/91 (50%), Gaps = 10/91 (10%) Frame = +2 Query: 353 LWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWI--DDLRTPAWVIPMLNNLQVEA 526 LWKAFF+ P W+D RK KK K PDF HK ALW+ DD P W+ LQ+ Sbjct: 224 LWKAFFSSPHEWWDNRKFKKNSKLPDFKHKISGDALWLRPDD---PLWI---KTKLQLLD 277 Query: 527 FSAPLSVET--------LWIAYFSDPSKWFD 595 + A E LW +F+ P +W+D Sbjct: 278 WKAGEHCEEERHKNHLYLWQVFFASPHEWWD 308 >gb|EXB42196.1| hypothetical protein L484_001276 [Morus notabilis] Length = 380 Score = 95.1 bits (235), Expect = 1e-17 Identities = 57/198 (28%), Positives = 84/198 (42%), Gaps = 30/198 (15%) Frame = +2 Query: 2 KWFDNRKTK----KSSTHPDFVHKSTHKSLWIE-----------------DFKTPTWVAP 118 +W+DNR K S +PDF+HK + +W+ K T V Sbjct: 168 QWWDNRDKKCNRSVSQKYPDFIHKDDRRGVWLNRAPRSVLIELEGLQFDVQIKNSTEVEQ 227 Query: 119 MLNNLQDKRENLWNNYFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALWIENTRNPT 286 +D W + + +W D R K + +PDF HKD ALW+ + P Sbjct: 228 FKGAKKDGDSASWRDLIDNSEQWKDYRNSKLNGLVNPRYPDFKHKDGSLALWLSSA--PQ 285 Query: 287 WVISMLDKLKNDAS-----SASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCN 451 WV L+ LK D + + LWK HP +W+D R K ++ PDF HK+ Sbjct: 286 WVSLQLEGLKFDGGFKKPKAVKANKDELWKDLVEHPEKWWDNRLGKLKENSPDFKHKETG 345 Query: 452 KALWIDDLRTPAWVIPML 505 + LW+ +P WV+ L Sbjct: 346 EGLWLRS--SPTWVLSKL 361 Score = 77.0 bits (188), Expect = 3e-12 Identities = 45/133 (33%), Positives = 65/133 (48%), Gaps = 18/133 (13%) Frame = +2 Query: 2 KWFDNRKTKKSST----HPDFVHKSTHKSLWIEDFKTPTWVAPMLNNLQ----------- 136 +W D R +K + +PDF HK +LW+ P WV+ L L+ Sbjct: 249 QWKDYRNSKLNGLVNPRYPDFKHKDGSLALWLSS--APQWVSLQLEGLKFDGGFKKPKAV 306 Query: 137 -DKRENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISML--D 307 ++ LW + P KW+DNR K N PDF HK+T + LW+ + +PTWV+S L Sbjct: 307 KANKDELWKDLVEHPEKWWDNRLGKLKENSPDFKHKETGEGLWLRS--SPTWVLSKLPPP 364 Query: 308 KLKNDASSASQTT 346 K K D+S + T Sbjct: 365 KSKQDSSFGKRDT 377 Score = 74.3 bits (181), Expect = 2e-11 Identities = 50/172 (29%), Positives = 74/172 (43%), Gaps = 25/172 (14%) Frame = +2 Query: 155 WNNYFTDPSKWFDNRKIK----KSNNHPDFVHKDTHDALWIENTRNPTWVISMLDKLKND 322 W + +P +W+DNR K S +PDF+HKD +W+ R P V+ L+ L+ D Sbjct: 159 WTDLLENPKQWWDNRDKKCNRSVSQKYPDFIHKDDRRGVWL--NRAPRSVLIELEGLQFD 216 Query: 323 ASSASQT------------TENLWKAFFAHPSRWFDKRKIK----KRDKHPDFTHKDCNK 454 + T W+ + +W D R K ++PDF HKD + Sbjct: 217 VQIKNSTEVEQFKGAKKDGDSASWRDLIDNSEQWKDYRNSKLNGLVNPRYPDFKHKDGSL 276 Query: 455 ALWIDDLRTPAWVIPMLNNLQVE-AFSAPLSV----ETLWIAYFSDPSKWFD 595 ALW+ P WV L L+ + F P +V + LW P KW+D Sbjct: 277 ALWLSS--APQWVSLQLEGLKFDGGFKKPKAVKANKDELWKDLVEHPEKWWD 326 >ref|XP_006393529.1| hypothetical protein EUTSA_v10011640mg [Eutrema salsugineum] gi|557090107|gb|ESQ30815.1| hypothetical protein EUTSA_v10011640mg [Eutrema salsugineum] Length = 329 Score = 95.1 bits (235), Expect = 1e-17 Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 3/125 (2%) Frame = +2 Query: 149 NLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWV---ISMLDKLKN 319 +LWN +F +P +W+D R+ KK+ PDF HKDT++A W+ + P WV + + D+ + Sbjct: 196 HLWNAFFANPDEWWDKRRNKKNPKQPDFKHKDTNEAFWL-GSDTPVWVTRQLELFDQKRP 254 Query: 320 DASSASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTPAWVIP 499 D FFA+P W+D R+ K + PDF HKD +ALW+ TP WV Sbjct: 255 D-------------VFFANPQEWWDNRRDKLNPRWPDFKHKDTGEALWLHS-DTPVWVSR 300 Query: 500 MLNNL 514 L L Sbjct: 301 QLELL 305 Score = 88.2 bits (217), Expect = 2e-15 Identities = 41/104 (39%), Positives = 62/104 (59%) Frame = +2 Query: 2 KWFDNRKTKKSSTHPDFVHKSTHKSLWIEDFKTPTWVAPMLNNLQDKRENLWNNYFTDPS 181 +W+D R+ KK+ PDF HK T+++ W+ TP WV L KR ++ +F +P Sbjct: 207 EWWDKRRNKKNPKQPDFKHKDTNEAFWLGS-DTPVWVTRQLELFDQKRPDV---FFANPQ 262 Query: 182 KWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISMLDKL 313 +W+DNR+ K + PDF HKDT +ALW+ ++ P WV L+ L Sbjct: 263 EWWDNRRDKLNPRWPDFKHKDTGEALWL-HSDTPVWVSRQLELL 305 Score = 70.9 bits (172), Expect = 3e-10 Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 1/97 (1%) Frame = +2 Query: 308 KLKNDASSASQTTE-NLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTP 484 K + D S+ E +LW AFFA+P W+DKR+ KK K PDF HKD N+A W+ TP Sbjct: 181 KSETDGIEESKNDEIHLWNAFFANPDEWWDKRRNKKNPKQPDFKHKDTNEAFWLGS-DTP 239 Query: 485 AWVIPMLNNLQVEAFSAPLSVETLWIAYFSDPSKWFD 595 WV Q+E F + +F++P +W+D Sbjct: 240 VWV-----TRQLELFD-----QKRPDVFFANPQEWWD 266 >ref|XP_002529526.1| hypothetical protein RCOM_1716690 [Ricinus communis] gi|223531010|gb|EEF32864.1| hypothetical protein RCOM_1716690 [Ricinus communis] Length = 281 Score = 94.7 bits (234), Expect = 2e-17 Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 28/196 (14%) Frame = +2 Query: 2 KWFDNRKTKKSSTHPDFVHKSTHKSLWIEDFKTPTWVAPMLNNLQ-DKRE---------- 148 +W+D R + F K + L+I D TP W+ L + DK+ Sbjct: 78 EWWDIRSQVDNPKGASFERKKNGELLYI-DHATPKWIQEKLEGMAFDKKTTVEGGKGSMI 136 Query: 149 -------NLWNNYFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALWIENTRNPTWVI 295 N W +DP +W+D R K + HPDF KD ALW+ P W++ Sbjct: 137 KNGDSVLNSWRELASDPKQWWDYRSSKLNGLVNPKHPDFKRKDGDVALWLNKA--PRWIL 194 Query: 296 SMLDKLKNDAS--SASQTTENL----WKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKA 457 S L+KL+ D + Q ++ W HP++W+D R KK +++PDF HK+ Sbjct: 195 SELEKLEFDVQIPKSKQVKQHKGDANWTDLVGHPNKWWDNRLNKKNERYPDFKHKETGVG 254 Query: 458 LWIDDLRTPAWVIPML 505 LW+ + +P WV+ L Sbjct: 255 LWLSN--SPTWVLSEL 268 Score = 82.4 bits (202), Expect = 8e-14 Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 17/129 (13%) Frame = +2 Query: 2 KWFDNRKTKKSST----HPDFVHKSTHKSLWIEDFKTPTWVAPMLNNL------------ 133 +W+D R +K + HPDF K +LW+ K P W+ L L Sbjct: 155 QWWDYRSSKLNGLVNPKHPDFKRKDGDVALWLN--KAPRWILSELEKLEFDVQIPKSKQV 212 Query: 134 -QDKRENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISMLDK 310 Q K + W + P+KW+DNR KK+ +PDF HK+T LW+ N +PTWV+S L Sbjct: 213 KQHKGDANWTDLVGHPNKWWDNRLNKKNERYPDFKHKETGVGLWLSN--SPTWVLSELPP 270 Query: 311 LKNDASSAS 337 +K D ++A+ Sbjct: 271 MKGDKNAAT 279 Score = 67.4 bits (163), Expect = 3e-09 Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 22/172 (12%) Frame = +2 Query: 146 ENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISMLDKLKNDA 325 E W + T P +W+D R + F K + L+I++ P W+ L+ + D Sbjct: 66 EQSWKDLLTSPHEWWDIRSQVDNPKGASFERKKNGELLYIDHA-TPKWIQEKLEGMAFDK 124 Query: 326 SSA-----------SQTTENLWKAFFAHPSRWFDKRKIK----KRDKHPDFTHKDCNKAL 460 + + N W+ + P +W+D R K KHPDF KD + AL Sbjct: 125 KTTVEGGKGSMIKNGDSVLNSWRELASDPKQWWDYRSSKLNGLVNPKHPDFKRKDGDVAL 184 Query: 461 WIDDLRTPAWVIPMLNNLQVEAFSAPLSVETL-------WIAYFSDPSKWFD 595 W++ + P W++ L L+ + P S + W P+KW+D Sbjct: 185 WLN--KAPRWILSELEKLEFDV-QIPKSKQVKQHKGDANWTDLVGHPNKWWD 233 >ref|XP_006398112.1| hypothetical protein EUTSA_v10000889mg [Eutrema salsugineum] gi|557099201|gb|ESQ39565.1| hypothetical protein EUTSA_v10000889mg [Eutrema salsugineum] Length = 437 Score = 91.3 bits (225), Expect = 2e-16 Identities = 65/202 (32%), Positives = 90/202 (44%), Gaps = 17/202 (8%) Frame = +2 Query: 2 KWFDNRKTKKSST----HPDFVHKSTHKSLWIEDFKTPTWVAPMLNNL------------ 133 +W D+R K S HPDF K SLW++ P WV LN L Sbjct: 216 EWVDHRGNKASGLVKPRHPDFKGKEGDLSLWLDS--APDWVLQKLNRLKFDVFVPKGKLK 273 Query: 134 QDKRENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISMLDKL 313 Q K E W + +P KW D+R K + PDF H++T +ALW+ T +PTWV+S L L Sbjct: 274 QLKGEESWKDLVENPDKWLDSRSTKTNVKAPDFKHRETGEALWM--TDSPTWVLSKLPPL 331 Query: 314 KNDASSAS-QTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTPAW 490 K T N+ K PDF HK+ +ALW+ +P W Sbjct: 332 KKTQERPQIVNTTNV---------------------KAPDFKHKESGEALWM--TASPTW 368 Query: 491 VIPMLNNLQVEAFSAPLSVETL 556 V+ L L+ ++ PL +T+ Sbjct: 369 VLLKLPPLK-KSQEQPLMAKTV 389 Score = 84.3 bits (207), Expect = 2e-14 Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 9/138 (6%) Frame = +2 Query: 131 LQDKRENLWNNYFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALWIENTRNPTWVIS 298 + ++ N W + +P +W D+R K S HPDF K+ +LW+++ P WV+ Sbjct: 199 MDEETSNAWKHLLENPKEWVDHRGNKASGLVKPRHPDFKGKEGDLSLWLDSA--PDWVLQ 256 Query: 299 MLDKLKNDASSASQTTENL-----WKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALW 463 L++LK D + L WK +P +W D R K K PDF H++ +ALW Sbjct: 257 KLNRLKFDVFVPKGKLKQLKGEESWKDLVENPDKWLDSRSTKTNVKAPDFKHRETGEALW 316 Query: 464 IDDLRTPAWVIPMLNNLQ 517 + D +P WV+ L L+ Sbjct: 317 MTD--SPTWVLSKLPPLK 332 >ref|XP_004513105.1| PREDICTED: protein OSB2, chloroplastic-like [Cicer arietinum] Length = 377 Score = 91.3 bits (225), Expect = 2e-16 Identities = 47/137 (34%), Positives = 72/137 (52%), Gaps = 10/137 (7%) Frame = +2 Query: 137 DKRENLWNNYFTDPSKWFDNRKIKK----SNNHPDFVHKDTHDALWIENTRNPTWVISML 304 D + W+N DP +W+D R K+ S +PDF KD +WI+ R P WV+S L Sbjct: 236 DSLSSSWSNLLGDPKQWWDYRDSKRKELVSPRYPDFKRKDGSAPIWID--RAPKWVLSRL 293 Query: 305 DKLKNDA------SSASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWI 466 +L+ D + + W +P++W+D R KK ++ PDF HK+ + LW+ Sbjct: 294 QELEFDIPVVKPKQAKDGNGDQSWNDLVQNPAKWWDNRLNKKNERGPDFKHKETGEGLWL 353 Query: 467 DDLRTPAWVIPMLNNLQ 517 D +P+WV+P L LQ Sbjct: 354 KD--SPSWVLPKLPPLQ 368 Score = 73.9 bits (180), Expect = 3e-11 Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 17/122 (13%) Frame = +2 Query: 2 KWFDNRKTKK----SSTHPDFVHKSTHKSLWIEDFKTPTWVAPMLNNLQ----------- 136 +W+D R +K+ S +PDF K +WI+ + P WV L L+ Sbjct: 251 QWWDYRDSKRKELVSPRYPDFKRKDGSAPIWID--RAPKWVLSRLQELEFDIPVVKPKQA 308 Query: 137 --DKRENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISMLDK 310 + WN+ +P+KW+DNR KK+ PDF HK+T + LW+++ +P+WV+ L Sbjct: 309 KDGNGDQSWNDLVQNPAKWWDNRLNKKNERGPDFKHKETGEGLWLKD--SPSWVLPKLPP 366 Query: 311 LK 316 L+ Sbjct: 367 LQ 368 Score = 58.9 bits (141), Expect = 1e-06 Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 13/164 (7%) Frame = +2 Query: 143 RENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISMLDKLKND 322 +E W + +PS+W D + K+S F K + + E ++ T +K D Sbjct: 182 KEKFWKDVLNNPSEWRDVQSTKESAESTAFERKPNGE-IQSEVKQSMTGG----EKKYPD 236 Query: 323 ASSASQTTENLWKAFFAHPSRWFDKRKIKKRD----KHPDFTHKDCNKALWIDDLRTPAW 490 + S+S W P +W+D R K+++ ++PDF KD + +WID R P W Sbjct: 237 SLSSS------WSNLLGDPKQWWDYRDSKRKELVSPRYPDFKRKDGSAPIWID--RAPKW 288 Query: 491 VIPMLNNLQVEAFSAPL---------SVETLWIAYFSDPSKWFD 595 V+ L L+ F P+ + + W +P+KW+D Sbjct: 289 VLSRLQELE---FDIPVVKPKQAKDGNGDQSWNDLVQNPAKWWD 329 >ref|XP_002869952.1| hypothetical protein ARALYDRAFT_492872 [Arabidopsis lyrata subsp. lyrata] gi|297315788|gb|EFH46211.1| hypothetical protein ARALYDRAFT_492872 [Arabidopsis lyrata subsp. lyrata] Length = 365 Score = 89.0 bits (219), Expect = 9e-16 Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 10/133 (7%) Frame = +2 Query: 137 DKRENLWNNYFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALWIENTRNPTWVISML 304 D+ + WN+ +P +W+D+R+ K + HPDF KD+ +LW+ P WV+ L Sbjct: 226 DEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSLSLWLNKA--PNWVLPKL 283 Query: 305 DKLKNDASSASQTT------ENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWI 466 + LK D E WK +P +W+D R K+ K PDF HK+ +ALW+ Sbjct: 284 EGLKFDVLVPKGRVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWL 343 Query: 467 DDLRTPAWVIPML 505 ++ +P WV+P L Sbjct: 344 NE--SPTWVLPKL 354 Score = 83.2 bits (204), Expect = 5e-14 Identities = 46/127 (36%), Positives = 64/127 (50%), Gaps = 17/127 (13%) Frame = +2 Query: 2 KWFDNRKTKKSST----HPDFVHKSTHKSLWIEDFKTPTWVAPMLNNL------------ 133 +W+D+R+ K + HPDF K + SLW+ K P WV P L L Sbjct: 241 EWWDHRENKVNGLVKPRHPDFKSKDSSLSLWLN--KAPNWVLPKLEGLKFDVLVPKGRVV 298 Query: 134 -QDKRENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISMLDK 310 Q K E W + +P KW+DNR K++ PDF HK+T +ALW+ +PTWV+ L Sbjct: 299 KQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWL--NESPTWVLPKLPP 356 Query: 311 LKNDASS 331 +K S Sbjct: 357 VKKKQES 363 >ref|XP_002510278.1| conserved hypothetical protein [Ricinus communis] gi|223550979|gb|EEF52465.1| conserved hypothetical protein [Ricinus communis] Length = 378 Score = 89.0 bits (219), Expect = 9e-16 Identities = 50/140 (35%), Positives = 71/140 (50%), Gaps = 17/140 (12%) Frame = +2 Query: 125 NNLQD--KRENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVIS 298 NN+++ R +LW +F P +W+D RK K++ PDF HK + LW+ +P WV Sbjct: 210 NNMENYKNRLDLWQLFFCKPCEWWDKRKSKQNPELPDFKHKYNGENLWLRPD-DPPWVKR 268 Query: 299 MLDKLKNDASSASQTT-------------ENLWKAFFAHPSRWFDKRKIKKRDKHPDFTH 439 L L + + Q +LW+ FF++P W+D RK K + PDF H Sbjct: 269 HLQLLDMEIAKQRQANGVGKSGMMRYSNRHHLWQVFFSNPHEWWDNRKNKTNRRSPDFKH 328 Query: 440 KDCNKALWI--DDLRTPAWV 493 KD +ALWI DD P WV Sbjct: 329 KDTGEALWIMRDD---PPWV 345 Score = 80.5 bits (197), Expect = 3e-13 Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 29/150 (19%) Frame = +2 Query: 2 KWFDNRKTKKSSTHPDFVHKSTHKSLWIEDFKTPTWVAPMLNNLQ--------------- 136 +W+D RK+K++ PDF HK ++LW+ P WV L L Sbjct: 231 EWWDKRKSKQNPELPDFKHKYNGENLWLRP-DDPPWVKRHLQLLDMEIAKQRQANGVGKS 289 Query: 137 -----DKRENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWV--- 292 R +LW +F++P +W+DNRK K + PDF HKDT +ALWI +P WV Sbjct: 290 GMMRYSNRHHLWQVFFSNPHEWWDNRKNKTNRRSPDFKHKDTGEALWIMRD-DPPWVKRQ 348 Query: 293 ISMLDKL------KNDASSASQTTENLWKA 364 + +LD + + S SQ +E ++ A Sbjct: 349 LKLLDFIMAEQCVREKVGSGSQLSEWIFDA 378 Score = 56.2 bits (134), Expect = 6e-06 Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 15/97 (15%) Frame = +2 Query: 350 NLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWI--DDLRTPAWVIPMLNNLQVE 523 +LW+ FF P W+DKRK K+ + PDF HK + LW+ DD P WV L L +E Sbjct: 220 DLWQLFFCKPCEWWDKRKSKQNPELPDFKHKYNGENLWLRPDD---PPWVKRHLQLLDME 276 Query: 524 -------------AFSAPLSVETLWIAYFSDPSKWFD 595 + LW +FS+P +W+D Sbjct: 277 IAKQRQANGVGKSGMMRYSNRHHLWQVFFSNPHEWWD 313 >ref|XP_002953456.1| hypothetical protein VOLCADRAFT_82305 [Volvox carteri f. nagariensis] gi|300261215|gb|EFJ45429.1| hypothetical protein VOLCADRAFT_82305 [Volvox carteri f. nagariensis] Length = 413 Score = 88.6 bits (218), Expect = 1e-15 Identities = 62/222 (27%), Positives = 91/222 (40%), Gaps = 51/222 (22%) Frame = +2 Query: 2 KWFDNRKTKKSSTHPDFVHKSTHK-SLWIEDFKTPTWVAPMLNNLQDKRENL-------- 154 +W+DNRK K + PDFV K ++WI+ TP W L+ L ++ Sbjct: 53 EWYDNRKRKTNPKAPDFVRKDDRSVAIWIDGRDTPGWYEEFLDELDSRQGGQQRGDRFGG 112 Query: 155 -----------------WNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHD-ALWIENTRN 280 W + +P +WFDNR K + PDF KD ALWI++ Sbjct: 113 DRPGGDRNDRRAAEMANWESLRNNPEEWFDNRSRKTNPRAPDFRRKDDRAVALWIDSYGA 172 Query: 281 PTWVISMLDKLKNDASSAS----------------QTTENL-------WKAFFAHPSRWF 391 P W+ +L +L S S Q E+ W + ++P WF Sbjct: 173 PEWLDDLLHELDARQSQRSSGYSQQQQGGYQQAPDQYVEDKRAAEMAKWDSLRSNPELWF 232 Query: 392 DKRKIKKRDKHPDFTHK-DCNKALWIDDLRTPAWVIPMLNNL 514 D R+ K K PDF K D + ALW+ + P ++ +L L Sbjct: 233 DNRRTKTNPKAPDFKLKSDRSVALWLSSYQLPDYLDDLLAEL 274 Score = 83.2 bits (204), Expect = 5e-14 Identities = 50/158 (31%), Positives = 72/158 (45%), Gaps = 23/158 (14%) Frame = +2 Query: 110 VAPMLNNLQDKRENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHD-ALWIENTRNPT 286 VAP + +D+ + W+ +P++W+DNRK K + PDFV KD A+WI+ P Sbjct: 29 VAPCSWSKRDEVLSNWDALRANPNEWYDNRKRKTNPKAPDFVRKDDRSVAIWIDGRDTPG 88 Query: 287 WVISMLDKL---------------------KNDASSASQTTENLWKAFFAHPSRWFDKRK 403 W LD+L +ND +A W++ +P WFD R Sbjct: 89 WYEEFLDELDSRQGGQQRGDRFGGDRPGGDRNDRRAAEMAN---WESLRNNPEEWFDNRS 145 Query: 404 IKKRDKHPDFTHKDCNK-ALWIDDLRTPAWVIPMLNNL 514 K + PDF KD ALWID P W+ +L+ L Sbjct: 146 RKTNPRAPDFRRKDDRAVALWIDSYGAPEWLDDLLHEL 183 >ref|XP_006413910.1| hypothetical protein EUTSA_v10025547mg [Eutrema salsugineum] gi|557115080|gb|ESQ55363.1| hypothetical protein EUTSA_v10025547mg [Eutrema salsugineum] Length = 360 Score = 88.2 bits (217), Expect = 2e-15 Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 10/127 (7%) Frame = +2 Query: 155 WNNYFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALWIENTRNPTWVISMLDKLKND 322 WN+ +P +W+D+R+ K + HPDF +KDT +LW+ P WV+ L+ L+ D Sbjct: 225 WNHLIENPKEWWDHRENKANGLVKPRHPDFKNKDTSVSLWLNKA--PDWVLPKLEGLEFD 282 Query: 323 ASSASQTT------ENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTP 484 E WK +P +W+D R K+ K PDF HK+ +ALW+++ +P Sbjct: 283 VLVPKSRGVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNE--SP 340 Query: 485 AWVIPML 505 WV+P L Sbjct: 341 TWVLPKL 347 Score = 83.2 bits (204), Expect = 5e-14 Identities = 45/118 (38%), Positives = 62/118 (52%), Gaps = 17/118 (14%) Frame = +2 Query: 2 KWFDNRKTKKSST----HPDFVHKSTHKSLWIEDFKTPTWVAPMLNNL------------ 133 +W+D+R+ K + HPDF +K T SLW+ K P WV P L L Sbjct: 234 EWWDHRENKANGLVKPRHPDFKNKDTSVSLWLN--KAPDWVLPKLEGLEFDVLVPKSRGV 291 Query: 134 -QDKRENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISML 304 Q K E W + +P KW+DNR K++ PDF HK+T +ALW+ +PTWV+ L Sbjct: 292 KQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWL--NESPTWVLPKL 347 >ref|NP_001031674.1| plastid transcriptionally active 9 [Arabidopsis thaliana] gi|332658861|gb|AEE84261.1| plastid transcriptionally active 9 [Arabidopsis thaliana] Length = 371 Score = 88.2 bits (217), Expect = 2e-15 Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 10/133 (7%) Frame = +2 Query: 137 DKRENLWNNYFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALWIENTRNPTWVISML 304 D+ + WN+ +P +W+D+R+ K + HPDF KD+ +LW+ P WV+ L Sbjct: 231 DEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLNKA--PNWVLPKL 288 Query: 305 DKLKNDASSASQTT------ENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWI 466 + L+ D E WK +P +W+D R K+ K PDF HK+ +ALW+ Sbjct: 289 EGLEFDVLVPKARVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWL 348 Query: 467 DDLRTPAWVIPML 505 ++ +P WV+P L Sbjct: 349 NE--SPTWVLPKL 359 Score = 82.8 bits (203), Expect = 6e-14 Identities = 46/127 (36%), Positives = 64/127 (50%), Gaps = 17/127 (13%) Frame = +2 Query: 2 KWFDNRKTKKSST----HPDFVHKSTHKSLWIEDFKTPTWVAPMLNNL------------ 133 +W+D+R+ K + HPDF K + SLW+ K P WV P L L Sbjct: 246 EWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLN--KAPNWVLPKLEGLEFDVLVPKARVV 303 Query: 134 -QDKRENLWNNYFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIENTRNPTWVISMLDK 310 Q K E W + +P KW+DNR K++ PDF HK+T +ALW+ +PTWV+ L Sbjct: 304 KQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWL--NESPTWVLPKLPP 361 Query: 311 LKNDASS 331 +K S Sbjct: 362 VKKKQES 368