BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00018152
         (872 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW27478.1| hypothetical protein PHAVU_003G205300g [Phaseolus...   115   1e-37
ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-37
ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citr...   125   3e-37
ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Caps...   126   4e-37
ref|NP_190408.1| pentatricopeptide repeat-containing protein [Ar...   126   5e-37
gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]     122   1e-36
gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]       116   1e-36
ref|XP_004515902.1| PREDICTED: pentatricopeptide repeat-containi...   109   1e-36
gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus pe...   125   2e-36
ref|XP_002877605.1| pentatricopeptide repeat-containing protein ...   124   2e-36
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...   111   1e-35
ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-35
ref|XP_006404282.1| hypothetical protein EUTSA_v10010209mg [Eutr...   121   2e-35
ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containi...   107   3e-35
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...   119   7e-35
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...   112   1e-34
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...   118   1e-34
gb|ESW27479.1| hypothetical protein PHAVU_003G205400g [Phaseolus...   103   3e-34
ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containi...   112   5e-34
ref|XP_002321639.2| pentatricopeptide repeat-containing family p...   125   5e-34

>gb|ESW27478.1| hypothetical protein PHAVU_003G205300g [Phaseolus vulgaris]
          Length = 631

 Score =  115 bits (289), Expect(2) = 1e-37
 Identities = 58/158 (36%), Positives = 96/158 (60%), Gaps = 5/158 (3%)
 Frame = +3

Query: 12  YNAMLSVLSKKKTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQKKGMSKDVLKLFIWTM 191
           YNA+ SVL++  + Q FW   EE+K  G  ++ +T + +  + QK  M +D +KL+   M
Sbjct: 265 YNAVASVLARNDSIQEFWSVIEELKSVGHELDIDTYIKISRQLQKNRMMEDAVKLYEHMM 324

Query: 192 ETKTYKPDVYYCFIVLHFLSKPKKPDVDAAKRVVEAFTKAGGTMDKRAFDGLHRCLTKAE 371
           +  +YKP V  C ++L  +S   KP++D   RV   +   G T+ K  +DG+HR LT A 
Sbjct: 325 DG-SYKPLVQDCSLLLKSISASDKPNLDLVFRVARKYESTGHTLSKAIYDGIHRSLTGAG 383

Query: 372 RFEEAMDTMKS-----YTPDNVTYSQLIFGLCKAKKCE 470
           +F+EA + +++     + PDN+TYSQ+++GLCK ++ E
Sbjct: 384 KFDEAENIVRTMRNAGHKPDNITYSQVVYGLCKMRRFE 421



 Score = 68.2 bits (165), Expect(2) = 1e-37
 Identities = 38/123 (30%), Positives = 65/123 (52%)
 Frame = +1

Query: 502 TWSVLMEGHLNANETDKSLELFWEMVESGCNVDFRIFKALIDHLFNNKREMDACNVMRKV 681
           TW++L++GH +ANE +K+L  F +M+E  CN D  +   L+D  F+ KR   A  V  ++
Sbjct: 441 TWTILIQGHCDANELEKALLCFSKMIEKDCNPDADLLDVLVDGFFSQKRIQGAYEVFIEI 500

Query: 682 IEEKKLNANPSHFVYAEIIKKLADSGMFEEASKFFDLTAGQFSYGHVALARPIISLLGKR 861
              +K   +P    Y ++I+KL +   FEEA +   L     ++ +     P +  + K 
Sbjct: 501 --SRKCRISPWQATYKKLIEKLLEVTKFEEALELLRLMK---THNYPPYHLPFVPYISKF 555

Query: 862 GTV 870
           G+V
Sbjct: 556 GSV 558


>ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Citrus sinensis]
          Length = 639

 Score =  126 bits (316), Expect(2) = 2e-37
 Identities = 64/158 (40%), Positives = 96/158 (60%), Gaps = 5/158 (3%)
 Frame = +3

Query: 12  YNAMLSVLSKKKTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQKKGMSKDVLKLFIWTM 191
           YN +L VL++ ++ ++FW   EEMK+ G+ M+ +T + +  +FQK  M +D +KLF + M
Sbjct: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328

Query: 192 ETKTYKPDVYYCFIVLHFLSKPKKPDVDAAKRVVEAFTKAGGTMDKRAFDGLHRCLTKAE 371
           +   YKP V  C ++L  +S    PD+    RV   +   G ++ K  +DG+HR LTK  
Sbjct: 329 DGP-YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387

Query: 372 RFEEAMDTMKS-----YTPDNVTYSQLIFGLCKAKKCE 470
           RF+EA   MK+     + PDN+TYSQ+IFGLCKA   E
Sbjct: 388 RFDEAEKIMKAMKNAGFEPDNITYSQVIFGLCKAGSFE 425



 Score = 57.0 bits (136), Expect(2) = 2e-37
 Identities = 35/123 (28%), Positives = 60/123 (48%)
 Frame = +1

Query: 502 TWSVLMEGHLNANETDKSLELFWEMVESGCNVDFRIFKALIDHLFNNKREMDACNVMRKV 681
           +W++L++GH  ANE D++L  F +M+E   + D  +   LI+   + KR   A  ++ ++
Sbjct: 445 SWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504

Query: 682 IEEKKLNANPSHFVYAEIIKKLADSGMFEEASKFFDLTAGQFSYGHVALARPIISLLGKR 861
           IE  K+   P    +  +I+KL  +   EEA     L   Q    +     P +  + K 
Sbjct: 505 IE--KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ---NYPPFPEPFVQYISKF 559

Query: 862 GTV 870
           GTV
Sbjct: 560 GTV 562


>ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citrus clementina]
           gi|557542189|gb|ESR53167.1| hypothetical protein
           CICLE_v10019266mg [Citrus clementina]
          Length = 639

 Score =  125 bits (314), Expect(2) = 3e-37
 Identities = 63/158 (39%), Positives = 97/158 (61%), Gaps = 5/158 (3%)
 Frame = +3

Query: 12  YNAMLSVLSKKKTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQKKGMSKDVLKLFIWTM 191
           YN +L VL++ ++ ++FW   EEMK+ G+ M+ +T + +  +FQK  + +D +KLF + M
Sbjct: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRIMEDAVKLFEFMM 328

Query: 192 ETKTYKPDVYYCFIVLHFLSKPKKPDVDAAKRVVEAFTKAGGTMDKRAFDGLHRCLTKAE 371
           +   YKP V  C ++L  +S    PD+    RV   +   G ++ K  +DG+HR LTK  
Sbjct: 329 DGP-YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387

Query: 372 RFEEAMDTMKS-----YTPDNVTYSQLIFGLCKAKKCE 470
           RF+EA   MK+     + PDN+TYSQ+IFGLCKA + E
Sbjct: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425



 Score = 57.4 bits (137), Expect(2) = 3e-37
 Identities = 35/122 (28%), Positives = 60/122 (49%)
 Frame = +1

Query: 502 TWSVLMEGHLNANETDKSLELFWEMVESGCNVDFRIFKALIDHLFNNKREMDACNVMRKV 681
           TW++L++GH  ANE D++L  F +M+E   + D  +   LI+   + KR   A  ++ ++
Sbjct: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504

Query: 682 IEEKKLNANPSHFVYAEIIKKLADSGMFEEASKFFDLTAGQFSYGHVALARPIISLLGKR 861
           IE  K++  P    +  +I+KL  +   EEA     L   Q    +     P +  + K 
Sbjct: 505 IE--KVHLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ---NYPPFPEPFVQYISKF 559

Query: 862 GT 867
           GT
Sbjct: 560 GT 561


>ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Capsella rubella]
           gi|565465717|ref|XP_006290750.1| hypothetical protein
           CARUB_v10016848mg [Capsella rubella]
           gi|482559456|gb|EOA23647.1| hypothetical protein
           CARUB_v10016848mg [Capsella rubella]
           gi|482559457|gb|EOA23648.1| hypothetical protein
           CARUB_v10016848mg [Capsella rubella]
          Length = 618

 Score =  126 bits (317), Expect(2) = 4e-37
 Identities = 66/158 (41%), Positives = 95/158 (60%), Gaps = 5/158 (3%)
 Frame = +3

Query: 12  YNAMLSVLSKKKTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQKKGMSKDVLKLFIWTM 191
           YNA L VL++  +   FW   +EMK  G+ M+ +T + V  +FQK  M  + +KL+ + M
Sbjct: 263 YNAALRVLTRPNSVAEFWNVVDEMKIAGYEMDLDTYIRVSRQFQKSRMMTEAVKLYEYMM 322

Query: 192 ETKTYKPDVYYCFIVLHFLSKPKKPDVDAAKRVVEAFTKAGGTMDKRAFDGLHRCLTKAE 371
           +   +KP V+ C  +L  LS    PD+D   RV   F  +G ++ K  +DG+HR LT   
Sbjct: 323 DGP-FKPLVHDCSTLLRSLSAGPNPDLDLVFRVSRKFESSGNSLSKAVYDGIHRSLTSVG 381

Query: 372 RFEEAMDTMK-----SYTPDNVTYSQLIFGLCKAKKCE 470
           RF+EA + +K     SY PDN+TYSQL+FGLCKAK+ E
Sbjct: 382 RFDEAEEIIKAMRNASYEPDNITYSQLVFGLCKAKRLE 419



 Score = 55.8 bits (133), Expect(2) = 4e-37
 Identities = 37/123 (30%), Positives = 56/123 (45%)
 Frame = +1

Query: 502 TWSVLMEGHLNANETDKSLELFWEMVESGCNVDFRIFKALIDHLFNNKREMDACNVMRKV 681
           TW++L++GH   NE DK+   F  M+E G +VD  + + LI    +  R   A   + ++
Sbjct: 439 TWTILIQGHCKNNELDKAFACFANMLEKGFDVDSDLLEVLIGGFLSQNRIEGAYKFLMEM 498

Query: 682 IEEKKLNANPSHFVYAEIIKKLADSGMFEEASKFFDLTAGQFSYGHVALARPIISLLGKR 861
           +  +  N  P    Y  +I KL +    EEA    DL        + A A P    L K 
Sbjct: 499 V--RNANVRPWQSTYKILIDKLLEIKKGEEA---LDLLQMMKKQNYPAYAEPFDGYLAKF 553

Query: 862 GTV 870
           GT+
Sbjct: 554 GTL 556


>ref|NP_190408.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207690|sp|Q9STK5.1|PP269_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g48250, chloroplastic; Flags: Precursor
           gi|4678363|emb|CAB41173.1| putative protein [Arabidopsis
           thaliana] gi|332644870|gb|AEE78391.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  126 bits (316), Expect(2) = 5e-37
 Identities = 63/158 (39%), Positives = 94/158 (59%), Gaps = 5/158 (3%)
 Frame = +3

Query: 12  YNAMLSVLSKKKTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQKKGMSKDVLKLFIWTM 191
           YNA L VL++  +   FW   +EMK  G+ M+ +T + V  +FQK  M  + +KL+ + M
Sbjct: 266 YNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMM 325

Query: 192 ETKTYKPDVYYCFIVLHFLSKPKKPDVDAAKRVVEAFTKAGGTMDKRAFDGLHRCLTKAE 371
           +   +KP +  C ++L +LS    PD+D   RV   +   G ++ K  +DG+HR LT   
Sbjct: 326 DGP-FKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVG 384

Query: 372 RFEEAMDTMKS-----YTPDNVTYSQLIFGLCKAKKCE 470
           RF+EA +  K+     Y PDN+TYSQL+FGLCKAK+ E
Sbjct: 385 RFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLE 422



 Score = 55.8 bits (133), Expect(2) = 5e-37
 Identities = 41/124 (33%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
 Frame = +1

Query: 502 TWSVLMEGHLNANETDKSLELFWEMVESGCNVDFRIFKALID-HLFNNKREMDACNVMRK 678
           TW++L++GH   NE DK+L  F  M+E G ++D  +   LID  + +NK E  +  +M  
Sbjct: 442 TWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEM 501

Query: 679 VIEEKKLNANPSHFVYAEIIKKLADSGMFEEASKFFDLTAGQFSYGHVALARPIISLLGK 858
           V   K  N  P    Y  +I KL      EEA    DL        + A A      L K
Sbjct: 502 V---KNANVKPWQSTYKLLIDKLLKIKKSEEA---LDLLQMMKKQNYPAYAEAFDGYLAK 555

Query: 859 RGTV 870
            GT+
Sbjct: 556 FGTL 559


>gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]
          Length = 628

 Score =  122 bits (306), Expect(2) = 1e-36
 Identities = 65/161 (40%), Positives = 93/161 (57%), Gaps = 5/161 (3%)
 Frame = +3

Query: 3   SSVYNAMLSVLSKKKTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQKKGMSKDVLKLFI 182
           S  YNA   VLS+  +   FW   EEMK  G+ ++ +  + +  +FQK  M +D +KL+ 
Sbjct: 264 SVTYNAAARVLSRDDSIGEFWGMIEEMKGAGYDLDIDNYIKISRQFQKSKMMEDSVKLYE 323

Query: 183 WTMETKTYKPDVYYCFIVLHFLSKPKKPDVDAAKRVVEAFTKAGGTMDKRAFDGLHRCLT 362
           + M+   +KP    C ++L  +S    PD   A RV + +   G T+ K A+DG+HR LT
Sbjct: 324 FMMDGP-FKPSAQDCNLLLRSISAGDNPDCSLAFRVAKKYESTGRTLSKAAYDGIHRSLT 382

Query: 363 KAERFEEAMDTMK-----SYTPDNVTYSQLIFGLCKAKKCE 470
            A RF+EA   MK      Y PDN+TYSQL+FGLCKA++ E
Sbjct: 383 SAGRFDEAEKMMKVMRNAGYEPDNITYSQLVFGLCKARRLE 423



 Score = 58.5 bits (140), Expect(2) = 1e-36
 Identities = 34/123 (27%), Positives = 60/123 (48%)
 Frame = +1

Query: 502 TWSVLMEGHLNANETDKSLELFWEMVESGCNVDFRIFKALIDHLFNNKREMDACNVMRKV 681
           TW++L++GH +A E DK L  F +M+E  CNVD  +   LI    + ++   A +++ ++
Sbjct: 443 TWTILIQGHCSAGEVDKGLMCFMKMMEEDCNVDGDLLDVLIKGFLSQRKIKGAYDLLIEL 502

Query: 682 IEEKKLNANPSHFVYAEIIKKLADSGMFEEASKFFDLTAGQFSYGHVALARPIISLLGKR 861
           ++  K    P    Y  +I+K+ +    EEA     L      + +     P +  + K 
Sbjct: 503 VD--KARVIPWQATYKNLIEKMLEVRKLEEAMNLLRLMK---KHKYPPYHDPFVPYISKF 557

Query: 862 GTV 870
           GTV
Sbjct: 558 GTV 560


>gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]
          Length = 627

 Score =  116 bits (291), Expect(2) = 1e-36
 Identities = 60/153 (39%), Positives = 89/153 (58%), Gaps = 5/153 (3%)
 Frame = +3

Query: 12  YNAMLSVLSKKKTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQKKGMSKDVLKLFIWTM 191
           YN +L +L ++++   FW    EM   GF ++ +T + V   FQK  M +D +KL+   M
Sbjct: 272 YNGVLRILCREESIDEFWNVFSEMNAAGFRLDIDTYVKVSRSFQKNAMFEDGVKLYEHMM 331

Query: 192 ETKTYKPDVYYCFIVLHFLSKPKKPDVDAAKRVVEAFTKAGGTMDKRAFDGLHRCLTKAE 371
           ++  YKP V  C  +L  LS+   PD+    RV+E F   G ++ K  +DG+HR LT+  
Sbjct: 332 DSP-YKPSVSECNYLLQALSRHGSPDLGLIDRVIEKFVAGGNSLSKTLYDGIHRSLTRLG 390

Query: 372 RFEEAMDTMK-----SYTPDNVTYSQLIFGLCK 455
           +FEEA   ++      + PDNVTYSQL+FGLCK
Sbjct: 391 KFEEAEGIVEKMRENGFEPDNVTYSQLVFGLCK 423



 Score = 64.3 bits (155), Expect(2) = 1e-36
 Identities = 37/125 (29%), Positives = 63/125 (50%)
 Frame = +1

Query: 496 MITWSVLMEGHLNANETDKSLELFWEMVESGCNVDFRIFKALIDHLFNNKREMDACNVMR 675
           ++TW++L+ GH    ETDK++  F  M+E G + D  + +A++D L    R  DA  ++ 
Sbjct: 446 IMTWTILIRGHFKGGETDKAMLHFARMMEKGFDPDADLLEAIVDELSKKSRAPDAFRLLV 505

Query: 676 KVIEEKKLNANPSHFVYAEIIKKLADSGMFEEASKFFDLTAGQFSYGHVALARPIISLLG 855
           ++ E  KL   P    +  +I++L D   FEEA +   +   Q    H     P +  + 
Sbjct: 506 ELAE--KLKLRPWQSTFKNLIQQLLDGRRFEEAVRLLAMMKRQNYPPH---CEPFVDYVS 560

Query: 856 KRGTV 870
           K G+V
Sbjct: 561 KFGSV 565


>ref|XP_004515902.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cicer arietinum]
          Length = 635

 Score =  109 bits (273), Expect(2) = 1e-36
 Identities = 56/158 (35%), Positives = 95/158 (60%), Gaps = 5/158 (3%)
 Frame = +3

Query: 12  YNAMLSVLSKKKTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQKKGMSKDVLKLFIWTM 191
           YNA+  VL++  + + FW   EEMK   + ++ +T  ++ M+  K  M ++ ++L+   M
Sbjct: 270 YNAVARVLARPGSIKEFWSILEEMKSVRYQLDIDTYTTITMQLVKNQMIENAVELYELMM 329

Query: 192 ETKTYKPDVYYCFIVLHFLSKPKKPDVDAAKRVVEAFTKAGGTMDKRAFDGLHRCLTKAE 371
           +  +YKP  + C ++L+ +S    P+ D A RV + +   G T+ K  +DG+HR LT A 
Sbjct: 330 DG-SYKPSTHDCCVLLNAISTSDFPNSDLAFRVAKKYESVGHTLTKEIYDGIHRSLTSAG 388

Query: 372 RFEEAMDTMKS-----YTPDNVTYSQLIFGLCKAKKCE 470
           +F+EA   +K+     + PD+VTYSQ++FGLCK K+ E
Sbjct: 389 KFDEAEKIVKTMSNAGFEPDSVTYSQVVFGLCKMKRLE 426



 Score = 70.9 bits (172), Expect(2) = 1e-36
 Identities = 37/123 (30%), Positives = 64/123 (52%)
 Frame = +1

Query: 502 TWSVLMEGHLNANETDKSLELFWEMVESGCNVDFRIFKALIDHLFNNKREMDACNVMRKV 681
           TWS+L++G+  ANE DK+L    +M+E GCN D      L+D   + ++  DA   + ++
Sbjct: 446 TWSILIQGYCAANEVDKALHCLLKMIEKGCNADAGAISVLVDSWLSQEKIDDAYKFLAEM 505

Query: 682 IEEKKLNANPSHFVYAEIIKKLADSGMFEEASKFFDLTAGQFSYGHVALARPIISLLGKR 861
           +  +  +A+P    Y ++I+ L   G  EEA     L    + + +    +PI+  + K 
Sbjct: 506 V--RNCDASPRQPTYEKVIENLLGIGKLEEALVLLCL---MWKHKYTPFTKPIVQFISKS 560

Query: 862 GTV 870
           GTV
Sbjct: 561 GTV 563


>gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus persica]
          Length = 646

 Score =  125 bits (313), Expect(2) = 2e-36
 Identities = 65/158 (41%), Positives = 92/158 (58%), Gaps = 5/158 (3%)
 Frame = +3

Query: 12  YNAMLSVLSKKKTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQKKGMSKDVLKLFIWTM 191
           YNA+  +L++  +   FW   EEMK  G  ++ +T + +  +FQK  M +D +KL+   M
Sbjct: 285 YNAVARILAQADSIGEFWSVIEEMKGAGHELDLDTYIKITRQFQKSKMMEDAVKLYELMM 344

Query: 192 ETKTYKPDVYYCFIVLHFLSKPKKPDVDAAKRVVEAFTKAGGTMDKRAFDGLHRCLTKAE 371
           +   YKP    C ++L  +S   KPD+D   RV + F  AG T+ K  +DG+HR LT A 
Sbjct: 345 DGP-YKPSAQDCSMLLRSISANDKPDLDMVFRVAKKFESAGNTLSKAVYDGIHRSLTSAG 403

Query: 372 RFEEAMDTMK-----SYTPDNVTYSQLIFGLCKAKKCE 470
            F+EA    K      Y PDN+TYSQL+FGLCKAK+ E
Sbjct: 404 SFDEAEKITKVMRNAGYEPDNITYSQLVFGLCKAKRLE 441



 Score = 55.1 bits (131), Expect(2) = 2e-36
 Identities = 33/125 (26%), Positives = 59/125 (47%)
 Frame = +1

Query: 496 MITWSVLMEGHLNANETDKSLELFWEMVESGCNVDFRIFKALIDHLFNNKREMDACNVMR 675
           ++TW++L++GH  ANE D +L  F +M+E GC+ D  +   LI+     ++   A  ++ 
Sbjct: 459 IMTWTILIQGHCAANEVDTALVCFAKMIEKGCDADADLLDVLINGFLKQRKIEGAYKLLI 518

Query: 676 KVIEEKKLNANPSHFVYAEIIKKLADSGMFEEASKFFDLTAGQFSYGHVALARPIISLLG 855
           +++   +L   P    Y  +I+ L      +EA     L   Q    +     P +  L 
Sbjct: 519 EMVNMTRL--RPWQATYKNLIENLLGVRKLDEAFALLHLMKKQ---SYPPYPDPFVQYLS 573

Query: 856 KRGTV 870
           K G+V
Sbjct: 574 KFGSV 578


>ref|XP_002877605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323443|gb|EFH53864.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 618

 Score =  124 bits (312), Expect(2) = 2e-36
 Identities = 63/158 (39%), Positives = 93/158 (58%), Gaps = 5/158 (3%)
 Frame = +3

Query: 12  YNAMLSVLSKKKTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQKKGMSKDVLKLFIWTM 191
           YNA L VL++  +   FW   +EMK  G  M+ +T + V  +FQK  M  + +KL+ + M
Sbjct: 263 YNAALRVLARPNSVAEFWSVVDEMKTAGHEMDLDTYIKVSRQFQKSRMITETVKLYEYMM 322

Query: 192 ETKTYKPDVYYCFIVLHFLSKPKKPDVDAAKRVVEAFTKAGGTMDKRAFDGLHRCLTKAE 371
           +   +KP +  C ++L +LS    PD+D   RV   +   G ++ K  +DG+HR LT   
Sbjct: 323 DGP-FKPSIQDCSLLLRYLSARPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVG 381

Query: 372 RFEEAMDTMKS-----YTPDNVTYSQLIFGLCKAKKCE 470
           RF+EA +  K+     Y PDN+TYSQL+FGLCKAK+ E
Sbjct: 382 RFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLE 419



 Score = 55.1 bits (131), Expect(2) = 2e-36
 Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
 Frame = +1

Query: 502 TWSVLMEGHLNANETDKSLELFWEMVESGCNVDFRIFKALID-HLFNNKREMDACNVMRK 678
           TW++L++GH   NE D++L  F  M+E G ++D  +   LID  L  N+ E  +  +M  
Sbjct: 439 TWTILIQGHCKNNELDRALACFANMLEKGFDIDSNLLDVLIDGFLIQNRIEGASIFLMEM 498

Query: 679 VIEEKKLNANPSHFVYAEIIKKLADSGMFEEASKFFDLTAGQFSYGHVALARPIISLLGK 858
           V   K  N  P    Y  +I KL +    +EA     L   Q    + A A      L K
Sbjct: 499 V---KNANVKPWQSTYKRLIDKLLEIKKGKEALDLLQLMKKQ---NYPAYAEAFDGYLAK 552

Query: 859 RGTV 870
            GT+
Sbjct: 553 FGTL 556


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score =  111 bits (278), Expect(2) = 1e-35
 Identities = 57/158 (36%), Positives = 93/158 (58%), Gaps = 5/158 (3%)
 Frame = +3

Query: 12  YNAMLSVLSKKKTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQKKGMSKDVLKLFIWTM 191
           YNA+  VL + ++ + FW   EEMK  G  ++ +T + +  + Q+  M +D +KL+   M
Sbjct: 267 YNAVARVLPRAESIEEFWSVIEEMKRVGHELDIDTYIKITRQLQRNRMMEDAVKLYELMM 326

Query: 192 ETKTYKPDVYYCFIVLHFLSKPKKPDVDAAKRVVEAFTKAGGTMDKRAFDGLHRCLTKAE 371
           +    KP V  C ++L  +S   KP++D   RV + +   G T+ K  +DG+HR LT A 
Sbjct: 327 DGSC-KPLVQDCNMLLKSISANDKPNLDLVFRVAKKYESTGHTLSKAIYDGIHRSLTSAG 385

Query: 372 RFEEAMDTMKS-----YTPDNVTYSQLIFGLCKAKKCE 470
            F+EA + +++     Y PDN+TYSQ++FGLCK ++ E
Sbjct: 386 NFDEAENIVRTMRNAGYEPDNITYSQMVFGLCKMRRFE 423



 Score = 65.9 bits (159), Expect(2) = 1e-35
 Identities = 38/123 (30%), Positives = 64/123 (52%)
 Frame = +1

Query: 502 TWSVLMEGHLNANETDKSLELFWEMVESGCNVDFRIFKALIDHLFNNKREMDACNVMRKV 681
           TW++L++GH +ANE DK+L  F +M+E GC+ D  +   L D   + KR   A  ++ ++
Sbjct: 443 TWTILIQGHCSANEVDKALLCFAKMIEKGCDPDADLLDVLADGFLSQKRIEGAYELVAEI 502

Query: 682 IEEKKLNANPSHFVYAEIIKKLADSGMFEEASKFFDLTAGQFSYGHVALARPIISLLGKR 861
              +K   +P    Y ++I+KL     FEEA +   L     S+ +     P +  + K 
Sbjct: 503 --SRKCRISPWQATYKKLIEKLLGVMKFEEALELLRLMK---SHNYPPYHLPFVPYISKF 557

Query: 862 GTV 870
           G+V
Sbjct: 558 GSV 560


>ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 630

 Score =  124 bits (310), Expect(2) = 1e-35
 Identities = 67/161 (41%), Positives = 95/161 (59%), Gaps = 5/161 (3%)
 Frame = +3

Query: 3   SSVYNAMLSVLSKKKTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQKKGMSKDVLKLFI 182
           S  YN M  VL +  +   FW   EEMK  G  ++ +T + +  +FQK  M +D +KL+ 
Sbjct: 264 SVTYNGMSLVLGQASSIGEFWSVIEEMKVAGQELDLDTYIKLSRQFQKSKMVEDAVKLYE 323

Query: 183 WTMETKTYKPDVYYCFIVLHFLSKPKKPDVDAAKRVVEAFTKAGGTMDKRAFDGLHRCLT 362
             M+   YKP V    I+L  +S  ++PD+D   RVV+ F  AG T+ K  +DG+HR LT
Sbjct: 324 LMMDGP-YKPSVQDVSILLRSISANERPDMDLVFRVVKKFESAGFTLSKAVYDGIHRSLT 382

Query: 363 KAERFEEAMDTM-----KSYTPDNVTYSQLIFGLCKAKKCE 470
              RF+EA DT+       + PDN+TYSQ++FGLCKAKK +
Sbjct: 383 NLGRFDEAEDTLIAMRNAGFEPDNITYSQVVFGLCKAKKLD 423



 Score = 53.5 bits (127), Expect(2) = 1e-35
 Identities = 34/123 (27%), Positives = 57/123 (46%)
 Frame = +1

Query: 502 TWSVLMEGHLNANETDKSLELFWEMVESGCNVDFRIFKALIDHLFNNKREMDACNVMRKV 681
           TW +L++GH  ANE DK+L  F +M+E  C  D  I   LI+ L    +   A  ++ ++
Sbjct: 443 TWMILIQGHCAANEIDKALICFAKMMEKECKADADILDVLINGLIKQAKVDGAYKLLIEM 502

Query: 682 IEEKKLNANPSHFVYAEIIKKLADSGMFEEASKFFDLTAGQFSYGHVALARPIISLLGKR 861
           +     +  P    +  +I+ L  +   EEA +   L   Q   G+     P +  + K 
Sbjct: 503 L--NTAHVRPWQATFKNLIQNLLGARKLEEAMELLCLMKKQ---GYPPYPEPFVGYISKF 557

Query: 862 GTV 870
           G+V
Sbjct: 558 GSV 560


>ref|XP_006404282.1| hypothetical protein EUTSA_v10010209mg [Eutrema salsugineum]
           gi|557105401|gb|ESQ45735.1| hypothetical protein
           EUTSA_v10010209mg [Eutrema salsugineum]
          Length = 617

 Score =  121 bits (304), Expect(2) = 2e-35
 Identities = 63/158 (39%), Positives = 93/158 (58%), Gaps = 5/158 (3%)
 Frame = +3

Query: 12  YNAMLSVLSKKKTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQKKGMSKDVLKLFIWTM 191
           YNA L VL++  +   FW   +EMK  G  ++ +T + V+ +FQK  M  + +KL+   M
Sbjct: 263 YNAALRVLARPNSVAEFWSVVDEMKVAGHEVDLDTYIKVLRQFQKSRMMIEAVKLYELMM 322

Query: 192 ETKTYKPDVYYCFIVLHFLSKPKKPDVDAAKRVVEAFTKAGGTMDKRAFDGLHRCLTKAE 371
           +   +KP    C ++L  LS   KPD+D   RV   +   G ++ K  +DG+HR LT   
Sbjct: 323 DGP-FKPSAQDCSLLLRSLSAGHKPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVG 381

Query: 372 RFEEAMDTMKS-----YTPDNVTYSQLIFGLCKAKKCE 470
           RF+EA + +K+     Y PDN+TYSQL+FGLCKAK+ E
Sbjct: 382 RFDEAEEIIKAMRDSGYEPDNITYSQLVFGLCKAKRLE 419



 Score = 55.1 bits (131), Expect(2) = 2e-35
 Identities = 33/123 (26%), Positives = 56/123 (45%)
 Frame = +1

Query: 502 TWSVLMEGHLNANETDKSLELFWEMVESGCNVDFRIFKALIDHLFNNKREMDACNVMRKV 681
           TW++L++GH   +E D++   F  M+E G ++D  +   L++   +  R   AC  + ++
Sbjct: 439 TWTILIQGHCKNSEVDQAFACFGNMLEKGFDIDSDLLAVLVNGFLSQNRIEGACKFLMEM 498

Query: 682 IEEKKLNANPSHFVYAEIIKKLADSGMFEEASKFFDLTAGQFSYGHVALARPIISLLGKR 861
           +  +  N  P    Y  +I KL +    EEA    DL        +   A P    L K 
Sbjct: 499 V--RNANVKPWQNTYKALIDKLLEIKKGEEA---LDLLQMMKKQNYPVYAEPFDGYLAKF 553

Query: 862 GTV 870
           G+V
Sbjct: 554 GSV 556


>ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score =  107 bits (266), Expect(2) = 3e-35
 Identities = 56/158 (35%), Positives = 88/158 (55%), Gaps = 5/158 (3%)
 Frame = +3

Query: 12  YNAMLSVLSKKKTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQKKGMSKDVLKLFIWTM 191
           YNA+  VL+   + + FW   EEMK  G  ++ +T + +  K QK  M +D +KL+  TM
Sbjct: 271 YNAIARVLASTDSIEKFWSVIEEMKSVGHELDIDTYIKISKKLQKNKMMEDAVKLYELTM 330

Query: 192 ETKTYKPDVYYCFIVLHFLSKPKKPDVDAAKRVVEAFTKAGGTMDKRAFDGLHRCLTKAE 371
           +  +YKP V  C ++L  +S    P++D   RV + +     T+ K  +DG+HR L+ A 
Sbjct: 331 D-GSYKPSVKDCSLLLKSISASDDPNLDLVFRVSKKYESTWHTLSKAIYDGIHRSLSGAG 389

Query: 372 RFEEAMDTMK-----SYTPDNVTYSQLIFGLCKAKKCE 470
           + +EA   +       Y PDN+TY+Q IFG CK +K +
Sbjct: 390 KLDEAESIVNHMRNAGYEPDNITYNQTIFGFCKMRKLD 427



 Score = 68.9 bits (167), Expect(2) = 3e-35
 Identities = 38/123 (30%), Positives = 61/123 (49%)
 Frame = +1

Query: 502 TWSVLMEGHLNANETDKSLELFWEMVESGCNVDFRIFKALIDHLFNNKREMDACNVMRKV 681
           TW++L++GH  ANE D++L     M+E GCN D  +   LI      KR  DA  ++ ++
Sbjct: 447 TWTILIQGHCVANEVDRALLCLNRMIEKGCNADAAVLGVLIGSFLGQKRIDDAYKLLVEI 506

Query: 682 IEEKKLNANPSHFVYAEIIKKLADSGMFEEASKFFDLTAGQFSYGHVALARPIISLLGKR 861
           +   K   +P H  YA++I  L   G  EEA    DL     ++    +  P +  + K 
Sbjct: 507 V--SKHGTSPRHGTYAKLIDNLLGIGKLEEA---LDLHCLMRNHEFTPIIEPFVQYISKF 561

Query: 862 GTV 870
           G++
Sbjct: 562 GSI 564


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score =  119 bits (297), Expect(2) = 7e-35
 Identities = 61/158 (38%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
 Frame = +3

Query: 12  YNAMLSVLSKKKTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQKKGMSKDVLKLFIWTM 191
           YNA+  VL +  +   FW   EEMK  G  M+ +T + +  +FQK  +  D +KL+ + M
Sbjct: 266 YNAIARVLGRDDSIGEFWSVVEEMKNAGHEMDIDTYIKISRQFQKNKLMGDAVKLYEFMM 325

Query: 192 ETKTYKPDVYYCFIVLHFLSKPKKPDVDAAKRVVEAFTKAGGTMDKRAFDGLHRCLTKAE 371
           +   +KP V  C ++L  +S    PD++   RVV  +   G ++ K  +DG+HR LT   
Sbjct: 326 DGP-FKPSVQDCSMLLRSISASNYPDLNLVFRVVNKYEATGNSLSKAVYDGIHRSLTSIG 384

Query: 372 RFEEAMDTMK-----SYTPDNVTYSQLIFGLCKAKKCE 470
            F+EA   MK      Y PDN+TYSQL+FGLCKA++ E
Sbjct: 385 NFDEAAKMMKCMQTAGYEPDNITYSQLVFGLCKARRLE 422



 Score = 55.8 bits (133), Expect(2) = 7e-35
 Identities = 34/123 (27%), Positives = 58/123 (47%)
 Frame = +1

Query: 502 TWSVLMEGHLNANETDKSLELFWEMVESGCNVDFRIFKALIDHLFNNKREMDACNVMRKV 681
           TW++L++GH  ANE  K+L    +M+E  C+ D  +   LI+   + KR   A  +   +
Sbjct: 442 TWTILIQGHCVANEVGKALMCLAKMMEKHCDPDADLLAVLINAFLSQKRIDGAYTLFMDM 501

Query: 682 IEEKKLNANPSHFVYAEIIKKLADSGMFEEASKFFDLTAGQFSYGHVALARPIISLLGKR 861
           +++ +L   P    Y  +I+KL +    EEA     L      + H     P +  + + 
Sbjct: 502 VDKARL--RPWQATYKLLIEKLLEVRKLEEALNLLRLMK---QHNHPPFPEPFVQYISRF 556

Query: 862 GTV 870
           GTV
Sbjct: 557 GTV 559


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score =  112 bits (281), Expect(2) = 1e-34
 Identities = 58/158 (36%), Positives = 91/158 (57%), Gaps = 5/158 (3%)
 Frame = +3

Query: 12  YNAMLSVLSKKKTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQKKGMSKDVLKLFIWTM 191
           YNA+  VL +  + + FW   EEMK     ++ +T + +  +FQK  M  + +KL+   M
Sbjct: 261 YNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKISRQFQKSKMMGEAVKLYELMM 320

Query: 192 ETKTYKPDVYYCFIVLHFLSKPKKPDVDAAKRVVEAFTKAGGTMDKRAFDGLHRCLTKAE 371
           +   YKP +  C ++L  ++    PD+    RV + F   G ++ K  +DG+HR LT   
Sbjct: 321 DGP-YKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATGYSLSKAMYDGIHRSLTSTG 379

Query: 372 RFEEAMDTMKS-----YTPDNVTYSQLIFGLCKAKKCE 470
           +F++A + +KS     Y PDNVTYSQL+FGLCKA++ E
Sbjct: 380 KFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLE 417



 Score = 61.6 bits (148), Expect(2) = 1e-34
 Identities = 37/123 (30%), Positives = 58/123 (47%)
 Frame = +1

Query: 502 TWSVLMEGHLNANETDKSLELFWEMVESGCNVDFRIFKALIDHLFNNKREMDACNVMRKV 681
           TW++L++GH NANE D +L  F +M+E  C+ D  +   LI    N K+   A  ++ ++
Sbjct: 437 TWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGFLNQKKLNGAYQLLIEL 496

Query: 682 IEEKKLNANPSHFVYAEIIKKLADSGMFEEASKFFDLTAGQFSYGHVALARPIISLLGKR 861
               K +  P    Y ++IK L +    EEA     L   Q    +     P +  + K 
Sbjct: 497 --TNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQ---NYPPFPEPFVQYISKF 551

Query: 862 GTV 870
           GTV
Sbjct: 552 GTV 554


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  118 bits (296), Expect(2) = 1e-34
 Identities = 64/161 (39%), Positives = 93/161 (57%), Gaps = 5/161 (3%)
 Frame = +3

Query: 3   SSVYNAMLSVLSKKKTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQKKGMSKDVLKLFI 182
           S  YN +  VL +  +   FW   EEMK  G  M+ +T + +  +FQK  M +D +KL+ 
Sbjct: 265 SITYNVIARVLGRDDSIGEFWSMVEEMKSKGHEMDIDTYIKISRQFQKNKMLEDAVKLYE 324

Query: 183 WTMETKTYKPDVYYCFIVLHFLSKPKKPDVDAAKRVVEAFTKAGGTMDKRAFDGLHRCLT 362
             M+   YKP V  C ++L  +S    PD+    RV E +   G ++ K  +DG+HR LT
Sbjct: 325 IMMDGP-YKPSVQDCTMLLRSISLSSNPDLALVFRVTEKYEAVGNSLCKAVYDGIHRSLT 383

Query: 363 KAERFEEA---MDTMKS--YTPDNVTYSQLIFGLCKAKKCE 470
              RF+EA   M++M+S    PDN+TYSQL++GLCKA+K E
Sbjct: 384 SVGRFDEAGKIMESMRSAGCEPDNITYSQLVYGLCKARKLE 424



 Score = 55.8 bits (133), Expect(2) = 1e-34
 Identities = 37/123 (30%), Positives = 57/123 (46%)
 Frame = +1

Query: 502 TWSVLMEGHLNANETDKSLELFWEMVESGCNVDFRIFKALIDHLFNNKREMDACNVMRKV 681
           TW++L++GH  A E DK+L  F +M+E  C+ D  + + LI+   + KR   A  ++ ++
Sbjct: 444 TWTILIQGHCAAKEVDKALICFAKMMEKNCDADADLLEVLINGFLSQKRIDGAYKLLVEM 503

Query: 682 IEEKKLNANPSHFVYAEIIKKLADSGMFEEASKFFDLTAGQFSYGHVALARPIISLLGKR 861
           +    L   P    Y  +I KL      EEA     L   Q    +     P I  + K 
Sbjct: 504 VNTAHL--VPWQATYKLMINKLLGVRKLEEAINLLHLMKKQ---NYPPFPEPFIEYISKF 558

Query: 862 GTV 870
           GTV
Sbjct: 559 GTV 561


>gb|ESW27479.1| hypothetical protein PHAVU_003G205400g [Phaseolus vulgaris]
          Length = 636

 Score =  103 bits (257), Expect(2) = 3e-34
 Identities = 53/158 (33%), Positives = 88/158 (55%), Gaps = 5/158 (3%)
 Frame = +3

Query: 12  YNAMLSVLSKKKTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQKKGMSKDVLKLFIWTM 191
           YNA   VL++  + + FW   EEMK     ++ +T L +    Q+  M +D +KL+   M
Sbjct: 271 YNAFARVLARTDSIEKFWSVIEEMKSVDHELDIDTYLKISRILQRNRMMEDAVKLYELMM 330

Query: 192 ETKTYKPDVYYCFIVLHFLSKPKKPDVDAAKRVVEAFTKAGGTMDKRAFDGLHRCLTKAE 371
           ++ +YKP V  C  +L+ +S+  KP++D   RV + +   G T+ K  +DG+HR L  + 
Sbjct: 331 DS-SYKPSVEDCCFLLNSISESDKPNLDLVFRVSKKYESTGHTLSKAIYDGIHRSLASSG 389

Query: 372 RFEEAMDTMK-----SYTPDNVTYSQLIFGLCKAKKCE 470
           + +EA D +       + PDN+TY Q+I G CK ++ E
Sbjct: 390 KLDEAEDIVNRMRNAGHEPDNITYGQVIVGFCKMRRLE 427



 Score = 69.3 bits (168), Expect(2) = 3e-34
 Identities = 40/123 (32%), Positives = 63/123 (51%)
 Frame = +1

Query: 502 TWSVLMEGHLNANETDKSLELFWEMVESGCNVDFRIFKALIDHLFNNKREMDACNVMRKV 681
           TW++L++G+  A+E DK+L    +M+E GCN+D  +   L D     KR  DA  ++ KV
Sbjct: 447 TWTLLVQGYCVASEVDKALLCLHKMIEKGCNLDATVLSVLTDSFLGQKRIDDAYKLLVKV 506

Query: 682 IEEKKLNANPSHFVYAEIIKKLADSGMFEEASKFFDLTAGQFSYGHVALARPIISLLGKR 861
           +   K  A+PSH  Y ++I  L +   FEEA     LT     +    +  P +  +   
Sbjct: 507 V--TKHGASPSHGTYKKLIVNLLEIEKFEEALNLLCLTR---KHKCTPILEPFVQYISNF 561

Query: 862 GTV 870
           G+V
Sbjct: 562 GSV 564


>ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Solanum lycopersicum]
          Length = 642

 Score =  112 bits (281), Expect(2) = 5e-34
 Identities = 61/158 (38%), Positives = 95/158 (60%), Gaps = 5/158 (3%)
 Frame = +3

Query: 12  YNAMLSVLSKKKTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQKKGMSKDVLKLFIWTM 191
           YN +L VL ++++ + FW   +EM   GF ++ +T + +   FQK  M KD ++L+   M
Sbjct: 270 YNGILRVLCREESIEEFWGVVKEMMSLGFEIDLDTYIKISRHFQKIKMLKDAVELYELMM 329

Query: 192 ETKTYKPDVYYCFIVLHFLSKPKKPDVDAAKRVVEAFTKAGGTMDKRAFDGLHRCLTKAE 371
           + + +KP +  C I+L  +++    D+D   RVVE F  AG +  K  +D +HRCLT   
Sbjct: 330 DGQ-FKPSLGECNILLRSIAQSYSSDLDLLFRVVEKFEAAGHSRSKIIYDVIHRCLTNLG 388

Query: 372 RFEEA---MDTMK--SYTPDNVTYSQLIFGLCKAKKCE 470
           RFEEA    + M+   + PDN+TYSQLI+GLCK ++ E
Sbjct: 389 RFEEAEKITEAMRDAGFEPDNITYSQLIYGLCKVRRLE 426



 Score = 59.3 bits (142), Expect(2) = 5e-34
 Identities = 35/123 (28%), Positives = 58/123 (47%)
 Frame = +1

Query: 502 TWSVLMEGHLNANETDKSLELFWEMVESGCNVDFRIFKALIDHLFNNKREMDACNVMRKV 681
           TW+VL++GH  A E DK+L  F +M+E   + D  +   L++   + +R   A  ++ ++
Sbjct: 446 TWTVLIQGHCFAGEVDKALFCFAKMMEKNVDTDADLLDVLLNGFLSQRRVFGAYQLLTEL 505

Query: 682 IEEKKLNANPSHFVYAEIIKKLADSGMFEEASKFFDLTAGQFSYGHVALARPIISLLGKR 861
           +   K    P    Y  +I+KL     FEEA    DL      + +     P +  + K 
Sbjct: 506 V--NKFQMRPWQATYKLVIQKLLGERKFEEA---LDLLRRMKKHNYPPFPEPFLQYISKS 560

Query: 862 GTV 870
           GTV
Sbjct: 561 GTV 563


>ref|XP_002321639.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550322390|gb|EEF05766.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 486

 Score =  125 bits (313), Expect(2) = 5e-34
 Identities = 59/158 (37%), Positives = 97/158 (61%), Gaps = 5/158 (3%)
 Frame = +3

Query: 12  YNAMLSVLSKKKTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQKKGMSKDVLKLFIWTM 191
           YNA++ VL +  +   FW   +EMK  G+ M+ +T + +  +FQK  + +D ++L+ + M
Sbjct: 125 YNALVRVLGRDDSIGEFWSVVDEMKNAGYEMDIDTYIKISRQFQKIKLMEDAVRLYEFMM 184

Query: 192 ETKTYKPDVYYCFIVLHFLSKPKKPDVDAAKRVVEAFTKAGGTMDKRAFDGLHRCLTKAE 371
           +   +KP V  C+I+L  ++    PD+D   RVV+ +   G ++ K  +DG+HR  T A 
Sbjct: 185 DGP-FKPSVQDCYILLRSVAASDNPDLDLVSRVVDGYKATGNSLSKSVYDGMHRSFTSAG 243

Query: 372 RFEEAMDTMKS-----YTPDNVTYSQLIFGLCKAKKCE 470
           +F+EA   +K+     Y PDN+TYSQL+FGLCK+K+ E
Sbjct: 244 KFDEAEKIVKAMRDAGYEPDNITYSQLVFGLCKSKRLE 281



 Score = 47.0 bits (110), Expect(2) = 5e-34
 Identities = 36/123 (29%), Positives = 54/123 (43%)
 Frame = +1

Query: 502 TWSVLMEGHLNANETDKSLELFWEMVESGCNVDFRIFKALIDHLFNNKREMDACNVMRKV 681
           TW++L++GH  AN+ DK L    +M E   + D  +   L+   F ++R+MD       V
Sbjct: 301 TWTILIQGHFAANQVDKGLLCLVKMTEKNTDPDADLLDVLVKG-FLSQRKMDGAYTF-LV 358

Query: 682 IEEKKLNANPSHFVYAEIIKKLADSGMFEEASKFFDLTAGQFSYGHVALARPIISLLGKR 861
               KL   P    Y  +I+KL      EEA+   DL      + +     P    + K 
Sbjct: 359 EMVNKLRLVPWQATYKLLIEKLLQVRKLEEAT---DLLRLMKKHNYPPFPEPFDQYISKF 415

Query: 862 GTV 870
           GTV
Sbjct: 416 GTV 418