BLASTX nr result

ID: Ephedra27_contig00018111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00018111
         (635 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006360660.1| PREDICTED: protein ECERIFERUM 7-like [Solanu...    66   7e-09
emb|CBI18185.3| unnamed protein product [Vitis vinifera]               66   1e-08
ref|XP_002270464.1| PREDICTED: exosome complex component rrp45-l...    66   1e-08
emb|CAN74356.1| hypothetical protein VITISV_000912 [Vitis vinifera]    66   1e-08
ref|XP_004240124.1| PREDICTED: exosome complex component rrp45-l...    61   2e-07
ref|XP_006858247.1| hypothetical protein AMTR_s00062p00201720 [A...    60   7e-07
ref|XP_006369568.1| hypothetical protein POPTR_0001s26010g [Popu...    57   4e-06
ref|XP_002876561.1| hypothetical protein ARALYDRAFT_486522 [Arab...    57   6e-06

>ref|XP_006360660.1| PREDICTED: protein ECERIFERUM 7-like [Solanum tuberosum]
          Length = 443

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 56/210 (26%), Positives = 87/210 (41%), Gaps = 12/210 (5%)
 Frame = +3

Query: 3   GVSQGEVLRCFRIATGKATDVTNILKSAFEAYKTEREQKKIKRHKAPKASFVEDDFFKSA 182
           GV Q  V++C RIA+ KA D+T+ +K+  E+YKTER  + +KRH    A  V +   K+ 
Sbjct: 248 GVMQSVVMQCLRIASVKAGDITSKIKTVVESYKTERALRMVKRHAPINAVDVNEPGGKAK 307

Query: 183 AEKITAVAGESKIGVSEAKGVKVETGEILENKAMDEDLFKTAVDMIAANARXXXXXXXXX 362
                      +  VS++  + VE G I  NK  D++                       
Sbjct: 308 QILEGQKLKSEECSVSQSDDMDVEQGRI--NKRTDKN----------------------- 342

Query: 363 XXXXXXXXXXXXXFSGGPSKWDPFSKGLSD-------STKGG-----NSSTIDDAEMLDA 506
                        F+GGPS WDP+S+G++        +++G      N   + D    + 
Sbjct: 343 -----------RSFTGGPSSWDPYSEGVNTDELKATLASRGSVAVPMNLDNLGDTIRDET 391

Query: 507 VASSILDTENGTSLDTDSSKLSQMQSKSET 596
            +   L   N  S  TDS+      SK +T
Sbjct: 392 KSDEPLSDVNPVSSSTDSAGKEMATSKEKT 421


>emb|CBI18185.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 3/161 (1%)
 Frame = +3

Query: 3   GVSQGEVLRCFRIATGKATDVTNILKSAFEAYKTEREQKKIKRHKAPKASFVEDDFFKSA 182
           G+ Q  +++C RIA+ KA D+T+ +K+A EA+ TER  +KIKRH +  A  V     K  
Sbjct: 189 GIIQSVIMQCLRIASVKAADITSKIKNAVEAFNTERALRKIKRHSSSIAVDVSGPGAKMR 248

Query: 183 AEKITAVAGE--SKIGVSEAKGVKVETGEILENKAMDEDLFKTAVDMIAANARXXXXXXX 356
             K  +V  +  +++     + +K+E+ E    ++ D ++ KT +       R       
Sbjct: 249 ENKNQSVDEKVVNELSSHHMERLKMESEESCVTQSSDVEV-KTQLSEQGRTNR------- 300

Query: 357 XXXXXXXXXXXXXXXFSGGPSKWDPFSKGL-SDSTKGGNSS 476
                          F GGPS WDP+SKG+ SD  K   +S
Sbjct: 301 --------SDENTRSFIGGPSSWDPYSKGIDSDFLKASLAS 333


>ref|XP_002270464.1| PREDICTED: exosome complex component rrp45-like [Vitis vinifera]
          Length = 467

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 3/161 (1%)
 Frame = +3

Query: 3   GVSQGEVLRCFRIATGKATDVTNILKSAFEAYKTEREQKKIKRHKAPKASFVEDDFFKSA 182
           G+ Q  +++C RIA+ KA D+T+ +K+A EA+ TER  +KIKRH +  A  V     K  
Sbjct: 249 GIIQSVIMQCLRIASVKAADITSKIKNAVEAFNTERALRKIKRHSSSIAVDVSGPGAKMR 308

Query: 183 AEKITAVAGE--SKIGVSEAKGVKVETGEILENKAMDEDLFKTAVDMIAANARXXXXXXX 356
             K  +V  +  +++     + +K+E+ E    ++ D ++ KT +       R       
Sbjct: 309 ENKNQSVDEKVVNELSSHHMERLKMESEESCVTQSSDVEV-KTQLSEQGRTNR------- 360

Query: 357 XXXXXXXXXXXXXXXFSGGPSKWDPFSKGL-SDSTKGGNSS 476
                          F GGPS WDP+SKG+ SD  K   +S
Sbjct: 361 --------SDENTRSFIGGPSSWDPYSKGIDSDFLKASLAS 393


>emb|CAN74356.1| hypothetical protein VITISV_000912 [Vitis vinifera]
          Length = 476

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 3/161 (1%)
 Frame = +3

Query: 3   GVSQGEVLRCFRIATGKATDVTNILKSAFEAYKTEREQKKIKRHKAPKASFVEDDFFKSA 182
           G+ Q  +++C RIA+ KA D+T+ +K+A EA+ TER  +KIKRH +  A  V     K  
Sbjct: 258 GIIQSVIMQCLRIASVKAADITSKIKNAVEAFNTERALRKIKRHSSSIAVDVSGPGAKMR 317

Query: 183 AEKITAVAGE--SKIGVSEAKGVKVETGEILENKAMDEDLFKTAVDMIAANARXXXXXXX 356
             K  +V  +  +++     + +K+E+ E    ++ D ++ KT +       R       
Sbjct: 318 ENKNQSVDEKVVNELSSHHMERLKMESEESCVTQSSDVEV-KTQLSEQGRTNR------- 369

Query: 357 XXXXXXXXXXXXXXXFSGGPSKWDPFSKGL-SDSTKGGNSS 476
                          F GGPS WDP+SKG+ SD  K   +S
Sbjct: 370 --------SDENTRSFIGGPSSWDPYSKGIDSDFLKASLAS 402


>ref|XP_004240124.1| PREDICTED: exosome complex component rrp45-like [Solanum
           lycopersicum]
          Length = 443

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 57/210 (27%), Positives = 85/210 (40%), Gaps = 12/210 (5%)
 Frame = +3

Query: 3   GVSQGEVLRCFRIATGKATDVTNILKSAFEAYKTEREQKKIKRHKAPKASFVEDDFFKSA 182
           GV Q  V++C RIA+ KA D+T+ +K+  E+YKTER  + +KRH    A  V     K+ 
Sbjct: 248 GVLQSVVMQCLRIASVKAGDITSKIKTVVESYKTERALRMVKRHAPRNAVDVNAPGEKAK 307

Query: 183 AEKITAVAGESKIGVSEAKGVKVETGEILENKAMDEDLFKTAVDMIAANARXXXXXXXXX 362
                      +  VS++  + VE G I   K  D+D                       
Sbjct: 308 QVLEGPKLKSEECSVSQSDDMDVEQGRI--KKKSDKD----------------------- 342

Query: 363 XXXXXXXXXXXXXFSGGPSKWDPFSKGL-SDSTKG--GNSSTIDDAEMLDAVASSILDTE 533
                        F+G PS WDP+S+G+ +D  K    +  ++     LD +  +I D  
Sbjct: 343 -----------RSFTGRPSSWDPYSEGVNTDELKATLASRGSVAVPMNLDNLGDNIRDET 391

Query: 534 ---------NGTSLDTDSSKLSQMQSKSET 596
                    N  S  TDS+      SK +T
Sbjct: 392 KTDEPLPDVNQVSSSTDSAGKEMTMSKEKT 421


>ref|XP_006858247.1| hypothetical protein AMTR_s00062p00201720 [Amborella trichopoda]
           gi|548862350|gb|ERN19714.1| hypothetical protein
           AMTR_s00062p00201720 [Amborella trichopoda]
          Length = 421

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 26/49 (53%), Positives = 36/49 (73%)
 Frame = +3

Query: 3   GVSQGEVLRCFRIATGKATDVTNILKSAFEAYKTEREQKKIKRHKAPKA 149
           GV Q E++RC R+A+ KATD+T+ +K A EAY  ER Q+KI+RH +  A
Sbjct: 249 GVKQSEIMRCLRLASQKATDITDKIKKAVEAYDLERAQRKIRRHSSSSA 297


>ref|XP_006369568.1| hypothetical protein POPTR_0001s26010g [Populus trichocarpa]
           gi|118486664|gb|ABK95169.1| unknown [Populus
           trichocarpa] gi|550348200|gb|ERP66137.1| hypothetical
           protein POPTR_0001s26010g [Populus trichocarpa]
          Length = 403

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 49/210 (23%), Positives = 83/210 (39%), Gaps = 22/210 (10%)
 Frame = +3

Query: 3   GVSQGEVLRCFRIATGKATDVTNILKSAFEAYKTEREQKKIKRHKAPKAS--FVEDDFFK 176
           GV Q  ++ C ++A+  A  +T  + +A EAY TER  +KIKRH    A    V     K
Sbjct: 189 GVPQSVIMHCLQLASMSAESITKKINNAVEAYSTERALRKIKRHPTSAAGNVSVAGSDVK 248

Query: 177 SAAEKITAVAGESKIGVSEAKGVKVETGEILENKAMDEDLFKTAVDMIAANARXXXXXXX 356
              + +  V G S++     + +++ + E   +++ D D                     
Sbjct: 249 EQNKTVEQVGG-SELSRHHMERLRLVSEETCSSRSNDND----------------GDIKS 291

Query: 357 XXXXXXXXXXXXXXXFSGGPSKWDPFSKGLSDST-------------------KGGNSST 479
                          F GGPS WDP+ KG+ D +                      NS  
Sbjct: 292 SEQGGTSGGESNAVSFLGGPSSWDPYLKGVDDDSLKPNVASRGISTQHMEQKESKENSPK 351

Query: 480 IDDAEMLDAVASSILDTE-NGTSLDTDSSK 566
           +D  +  + +  + L T+ +GT+L+T+  K
Sbjct: 352 MDTEKPTEDIKQATLATDTSGTALETNGEK 381


>ref|XP_002876561.1| hypothetical protein ARALYDRAFT_486522 [Arabidopsis lyrata subsp.
           lyrata] gi|297322399|gb|EFH52820.1| hypothetical protein
           ARALYDRAFT_486522 [Arabidopsis lyrata subsp. lyrata]
          Length = 438

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 1/154 (0%)
 Frame = +3

Query: 3   GVSQGEVLRCFRIATGKATDVTNILKSAFEAYKTEREQKKIKRHKAPKASFVEDDFFKSA 182
           GV+Q  +L C R+A+ +A   T I++   EAY  ER  +K+KRH     S V        
Sbjct: 249 GVNQSVILHCLRLASSRAAATTKIIREEVEAYNRERSLQKVKRHPTLAKSEVSGP----- 303

Query: 183 AEKITAVAGESKIGVSEAKGVKVETGEILENKAMDEDLFKTAVDMIAANARXXXXXXXXX 362
                AV  E +    + K  ++    +   K   E+L +++ +  A N           
Sbjct: 304 ---TVAVKEEYRKSSDQEKAAEISREHVERLKLSPEEL-RSSKEQEATN----------- 348

Query: 363 XXXXXXXXXXXXXFSGGPSKWDPFSKGLS-DSTK 461
                        F GGPS WDP+S+ +  DS K
Sbjct: 349 -------------FKGGPSNWDPYSEAMDVDSLK 369


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