BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00017919
         (618 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004667592.1| PREDICTED: synaptonemal complex protein 1 [J...    56   9e-06

>ref|XP_004667592.1| PREDICTED: synaptonemal complex protein 1 [Jaculus jaculus]
          Length = 994

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 3/195 (1%)
 Frame = -1

Query: 579 ASQLVDLTVQNDALGVELEAANKTLAEQSQMINASSNVQM---EINCRLDAMTQNINTAV 409
           +S+L ++T   +   VELE   K LAE  ++++    V+    E+  +   +T N+ T  
Sbjct: 416 SSELEEMTKLKNNKEVELEELKKILAEDQKLLDEKKQVEKIAEELKGKEQELTGNLKTRE 475

Query: 408 EELIPEEPVATDPTMQNLATDPTMQNLSYLEASLESLISKYKLLTAQNTASLKSLNDLAS 229
            E+        D  +Q  AT+ + Q+ S     L++ + K +L   +NT    S N L+ 
Sbjct: 476 REI-------HDLKVQLEATETSEQHYSKQVKDLKTELEKEQL---KNTELTASYNRLSL 525

Query: 228 EFVGCCGRDGLEMPLDVALREAFSSKQMELTKLQEALNEETSAKSLLEKDNQSLEETQKK 49
           E              +  L +  S   +EL + QE +N     + ++ K  ++LEE ++K
Sbjct: 526 E--------------NKELTQETSDMALELKRHQEDINNSKRQEDVMLKQIENLEEKERK 571

Query: 48  LQGDIDTLNAELTKK 4
           L+ ++++L  EL +K
Sbjct: 572 LKNELESLRVELIQK 586