BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00017745
         (1229 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006575396.1| PREDICTED: ribonuclease E/G-like protein, ch...   107   1e-20
ref|XP_006857728.1| hypothetical protein AMTR_s00061p00182640 [A...   104   8e-20
emb|CBI28473.3| unnamed protein product [Vitis vinifera]              103   2e-19
ref|XP_002267175.1| PREDICTED: uncharacterized protein LOC100256...   103   2e-19
ref|XP_004305684.1| PREDICTED: uncharacterized protein LOC101311...   102   3e-19
ref|XP_002883633.1| glycoside hydrolase starch-binding domain-co...   102   3e-19
ref|XP_003544280.1| PREDICTED: ribonuclease E/G-like protein, ch...   101   7e-19
ref|XP_006418596.1| hypothetical protein EUTSA_v10002385mg [Eutr...   100   1e-18
ref|XP_006418595.1| hypothetical protein EUTSA_v10002385mg [Eutr...   100   1e-18
ref|XP_003615550.1| Ribonuclease E [Medicago truncatula] gi|3555...   100   2e-18
gb|EXB34463.1| Ribonuclease E [Morus notabilis]                        97   1e-17
gb|EOX93566.1| RNAse E/G-like [Theobroma cacao]                        97   1e-17
ref|XP_002524601.1| hypothetical protein RCOM_1213430 [Ricinus c...    94   9e-17
ref|NP_850987.1| RNAse E/G-like protein [Arabidopsis thaliana] g...    93   2e-16
ref|NP_001189510.1| RNAse E/G-like protein [Arabidopsis thaliana...    93   2e-16
ref|XP_006469420.1| PREDICTED: ribonuclease E/G-like protein, ch...    93   3e-16
ref|XP_006469419.1| PREDICTED: ribonuclease E/G-like protein, ch...    93   3e-16
ref|XP_006447836.1| hypothetical protein CICLE_v10014166mg [Citr...    93   3e-16
ref|XP_004973211.1| PREDICTED: ribonuclease E/G-like protein, ch...    93   3e-16
ref|XP_006296899.1| hypothetical protein CARUB_v10012891mg [Caps...    93   3e-16

>ref|XP_006575396.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic-like
           isoform X1 [Glycine max]
          Length = 983

 Score =  107 bits (267), Expect = 1e-20
 Identities = 79/229 (34%), Positives = 108/229 (47%), Gaps = 39/229 (17%)
 Frame = +2

Query: 398 VWLFTSASSEHSTL--LAATKAPK-KTHHGEKSLVKVLWNVKADLEDGQQLFVSGSDTLL 568
           V+ F      H ++  LAA    K K+      L K++W V+ADLEDG  L+++G   +L
Sbjct: 38  VFRFMYCMKNHKSVRSLAALSTEKGKSATSVDELCKIIWTVEADLEDGHLLYITGDPAVL 97

Query: 569 GSWDPELAIPMSYCEGKSNCWKTEVQVPRGTTFEYNYFVKCKNSIVDDVRWRFGPTLSLS 748
           G W P +A+ MS  E  +N WK E Q+  G  F+YNYF+K K     DV WR GP  SLS
Sbjct: 98  GCWKPNMAVLMSPTED-ANTWKAEFQIAFGLNFKYNYFIKGKFGSSSDVLWRPGPAFSLS 156

Query: 749 LP-SSKRAKKKVVKDGPIQISDCQSSDRN------------DAASLGNLFLSHANTESIQ 889
           +P +     K VV+D  I+ SDCQ S  +            +  S+  L       ES+ 
Sbjct: 157 VPLTILEDNKIVVRDSWIR-SDCQMSSTHAWSPFTEETYLLEQPSISFLSKDDGRIESLL 215

Query: 890 TSDSHK-EEMGRE----------------------VSNLTYQPIEEPWL 967
            +D  K E +G E                      V +  YQP+EEPWL
Sbjct: 216 ENDVLKFESLGLEDQLLYNNDDMAIANDKDFQSTNVLSENYQPVEEPWL 264


>ref|XP_006857728.1| hypothetical protein AMTR_s00061p00182640 [Amborella trichopoda]
           gi|548861824|gb|ERN19195.1| hypothetical protein
           AMTR_s00061p00182640 [Amborella trichopoda]
          Length = 1068

 Score =  104 bits (259), Expect = 8e-20
 Identities = 55/124 (44%), Positives = 77/124 (62%), Gaps = 2/124 (1%)
 Frame = +2

Query: 425 EHSTLLAATKAPKKTHHGEKSLVKVLWNVKADLEDGQQLFVSGSDTLLGSWDPELAIPMS 604
           + S L++  KA  +T    +   +VLW+++ADLEDGQ L+++G    LG WDP LAI M 
Sbjct: 66  QQSPLMSTRKASIQTTI--QGSCEVLWSIQADLEDGQLLYITGDTLALGGWDPALAILMY 123

Query: 605 YCEGKSNCWKTEVQVPRGTTFEYNYFVKCKNSIVDDVRWRFGPTLSLSLPSSKRA--KKK 778
            CE ++N W+TE++VP G    YNYFVK  +    D+ WR GP  SLS+P S     +K 
Sbjct: 124 PCEEEANVWQTEIEVPCGVNIRYNYFVKEDSCASCDIVWRPGPVYSLSVPCSFECSHEKI 183

Query: 779 VVKD 790
           +VKD
Sbjct: 184 IVKD 187


>emb|CBI28473.3| unnamed protein product [Vitis vinifera]
          Length = 934

 Score =  103 bits (256), Expect = 2e-19
 Identities = 78/248 (31%), Positives = 119/248 (47%), Gaps = 47/248 (18%)
 Frame = +2

Query: 392 NVVWLFTSASSEHSTLLAAT-KAPKKTHHGE--KSLVKVLWNVKADLEDGQQLFVSGSDT 562
           N V+ FT     H+++L ++ K+ +K +     K L KV+W ++ADLEDGQ L+++G   
Sbjct: 51  NNVYRFTLCVGTHNSVLKSSIKSMRKGNSSTAFKGLCKVIWTIEADLEDGQLLYITGDPN 110

Query: 563 LLGSWDPELAIPMSYCEGKSNCWKTEVQVPRGTTFEYNYFVKCKNSIVDDVRWRFGPTLS 742
           +LG W+P++A+ MS  E  +N WK EV++  G  F+YNYF+K       D+ W+ GP  S
Sbjct: 111 VLGCWEPDMAVLMSPTE-HTNLWKAEVKITCGINFKYNYFLKGDAWPSCDIIWKPGPEFS 169

Query: 743 LSLP-SSKRAKKKVVKDGPI-----------------------------------QISDC 814
           L +P   K+ KK +V+D  +                                   +I+ C
Sbjct: 170 LLVPLHGKQDKKIMVRDSWMTSNARRPSAHIWGSWMEDSYFPAEHLISPPSRDEDEIAKC 229

Query: 815 QSSDRNDAASLGNLFLSHANTESIQTSDSH-------KEEMGREVSNLTYQPIEEPW-LS 970
             SD     SL  LFL   + E    SD+        K        ++  QP+EEPW L 
Sbjct: 230 LKSD-----SLSKLFLDDLSVEDKSFSDNEDTISAMSKGLDSNGTVSMRDQPVEEPWLLQ 284

Query: 971 ISLMPSEE 994
            SL+ S+E
Sbjct: 285 SSLIASKE 292


>ref|XP_002267175.1| PREDICTED: uncharacterized protein LOC100256290 [Vitis vinifera]
          Length = 1019

 Score =  103 bits (256), Expect = 2e-19
 Identities = 78/248 (31%), Positives = 119/248 (47%), Gaps = 47/248 (18%)
 Frame = +2

Query: 392 NVVWLFTSASSEHSTLLAAT-KAPKKTHHGE--KSLVKVLWNVKADLEDGQQLFVSGSDT 562
           N V+ FT     H+++L ++ K+ +K +     K L KV+W ++ADLEDGQ L+++G   
Sbjct: 51  NNVYRFTLCVGTHNSVLKSSIKSMRKGNSSTAFKGLCKVIWTIEADLEDGQLLYITGDPN 110

Query: 563 LLGSWDPELAIPMSYCEGKSNCWKTEVQVPRGTTFEYNYFVKCKNSIVDDVRWRFGPTLS 742
           +LG W+P++A+ MS  E  +N WK EV++  G  F+YNYF+K       D+ W+ GP  S
Sbjct: 111 VLGCWEPDMAVLMSPTE-HTNLWKAEVKITCGINFKYNYFLKGDAWPSCDIIWKPGPEFS 169

Query: 743 LSLP-SSKRAKKKVVKDGPI-----------------------------------QISDC 814
           L +P   K+ KK +V+D  +                                   +I+ C
Sbjct: 170 LLVPLHGKQDKKIMVRDSWMTSNARRPSAHIWGSWMEDSYFPAEHLISPPSRDEDEIAKC 229

Query: 815 QSSDRNDAASLGNLFLSHANTESIQTSDSH-------KEEMGREVSNLTYQPIEEPW-LS 970
             SD     SL  LFL   + E    SD+        K        ++  QP+EEPW L 
Sbjct: 230 LKSD-----SLSKLFLDDLSVEDKSFSDNEDTISAMSKGLDSNGTVSMRDQPVEEPWLLQ 284

Query: 971 ISLMPSEE 994
            SL+ S+E
Sbjct: 285 SSLIASKE 292


>ref|XP_004305684.1| PREDICTED: uncharacterized protein LOC101311406 [Fragaria vesca
           subsp. vesca]
          Length = 920

 Score =  102 bits (254), Expect = 3e-19
 Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 32/200 (16%)
 Frame = +2

Query: 464 KTHHGEKSLVKVLWNVKADLEDGQQLFVSGSDTLLGSWDPELAIPMSYCEGKSNCWKTEV 643
           K++   K + K++W ++ADLE GQ L+++G  + LGSW+P +AIPMS+ E  +N W+ E+
Sbjct: 5   KSNTSLKGMCKIVWTIEADLEAGQFLYLTGDLSALGSWEPGIAIPMSHTE-HTNLWQAEL 63

Query: 644 QVPRGTTFEYNYFVKCKNSIVDDVRWRFGPTLSLSLPSSKRAKKKVVKDG---------- 793
           ++  G  F+YNYF+K +     D+ WR GP LSLS+P   +  K VV+D           
Sbjct: 64  EIAGGVNFKYNYFIKREVWPSCDIIWRPGPELSLSVPLPVKGGKIVVRDSWMRTTMSPIY 123

Query: 794 --------------PIQISDCQSSDRNDAASLGNL--FLSHANTESIQTSD------SHK 907
                         P+  +  +     DA  +  +   LS    +S+ ++D      S +
Sbjct: 124 PWGSLIEETYFPIQPLFSAPARGKFHFDALYIDIIDPLLSDIRKDSVYSADDLTVNPSQR 183

Query: 908 EEMGREVSNLTYQPIEEPWL 967
             +   +S   YQ +EEPWL
Sbjct: 184 VSISSSLSTERYQLVEEPWL 203


>ref|XP_002883633.1| glycoside hydrolase starch-binding domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297329473|gb|EFH59892.1| glycoside hydrolase
           starch-binding domain-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 991

 Score =  102 bits (254), Expect = 3e-19
 Identities = 70/197 (35%), Positives = 94/197 (47%), Gaps = 35/197 (17%)
 Frame = +2

Query: 482 KSLVKVLWNVKADLEDGQQLFVSGSDTLLGSWDPELAIPMSYCEGKSNCWKTEVQVPRGT 661
           K L +V+W V+ADL   + L+V+G  + LGSW+P+ AI M Y     N W+ +V++  G 
Sbjct: 72  KGLCEVVWIVEADLAPNEHLYVTGDPSALGSWEPDCAISM-YPTENDNEWEAKVKIASGV 130

Query: 662 TFEYNYFVKCKNSIVDDVRWRFGPTLSLSLPSS-KRAKKKVVKDGPIQISDCQSSDR--- 829
            F YNYF+K       DV WR GP  SLS+PSS  R +K V++D  + +S          
Sbjct: 131 NFRYNYFLKAGYGSSSDVIWRPGPQFSLSVPSSVNRERKVVIRDSWMSVSSRSQESYVWG 190

Query: 830 ---NDAASLGNLFLSHANTESIQTSDSHKE----------------------EMGREVSN 934
              +DA    N   S  +  +I TSDS  E                          E SN
Sbjct: 191 SWIDDAYLFPNSVTSAQSEGNISTSDSAIEVPRTLLNDKQVGDESFFCDELAAFSSENSN 250

Query: 935 LT------YQPIEEPWL 967
           L+      YQPIEEPWL
Sbjct: 251 LSALFSDNYQPIEEPWL 267


>ref|XP_003544280.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic-like
           [Glycine max]
          Length = 983

 Score =  101 bits (251), Expect = 7e-19
 Identities = 73/215 (33%), Positives = 97/215 (45%), Gaps = 39/215 (18%)
 Frame = +2

Query: 440 LAATKAPK-KTHHGEKSLVKVLWNVKADLEDGQQLFVSGSDTLLGSWDPELAIPMSYCEG 616
           LAA    K K+      L K++W V+ADLEDG  LF++G   +LG W P +A+ +S  E 
Sbjct: 54  LAALSTEKGKSATSVDELCKIIWTVEADLEDGHLLFITGDPAVLGCWKPNMAVLLSPTE- 112

Query: 617 KSNCWKTEVQVPRGTTFEYNYFVKCKNSIVDDVRWRFGPTLSLSLPSSKRAKKK-VVKDG 793
            +N WK E Q+  G  F+YNYF+K K     DV WR GP  SLS+P       K VV+D 
Sbjct: 113 HANIWKAEFQIAFGLNFKYNYFIKGKFGSSSDVLWRPGPAFSLSVPLMVLEDNKIVVRDS 172

Query: 794 PIQISDCQSSD---------------------------------RNDAASLGNLFLS--- 865
            I+ SD Q S                                   ND      L L    
Sbjct: 173 WIR-SDSQMSSAHAWSPFTEETYLLEQPSISFLSKDDGRIESPLENDVLKFETLLLEDQL 231

Query: 866 -HANTESIQTSDSHKEEMGREVSNLTYQPIEEPWL 967
            + N + +  +D  K+     V +  YQP+EEPWL
Sbjct: 232 LYNNDDMVIAND--KDFQSTNVLSENYQPVEEPWL 264


>ref|XP_006418596.1| hypothetical protein EUTSA_v10002385mg [Eutrema salsugineum]
           gi|557096524|gb|ESQ37032.1| hypothetical protein
           EUTSA_v10002385mg [Eutrema salsugineum]
          Length = 957

 Score =  100 bits (249), Expect = 1e-18
 Identities = 73/224 (32%), Positives = 106/224 (47%), Gaps = 35/224 (15%)
 Frame = +2

Query: 398 VWLFTSASSEHSTLLAATKAPKKTHHGEKSLVKVLWNVKADLEDGQQLFVSGSDTLLGSW 577
           ++LF+S+S + ++               K L +V+W V+ADL   + L+V+G  + LGSW
Sbjct: 64  IFLFSSSSEQPASF-------------RKGLCEVVWIVEADLAPNEHLYVTGDPSALGSW 110

Query: 578 DPELAIPMSYCEGKSNCWKTEVQVPRGTTFEYNYFVKCKNSIVDDVRWRFGPTLSLSLPS 757
           +P  AI M Y  G  N W+ +V++  G  F YNYF+K       DV WR GP  SLS+PS
Sbjct: 111 EPNCAISM-YPTGNDNEWEAKVKIASGVNFRYNYFLKAGYGSSFDVIWRPGPQFSLSVPS 169

Query: 758 S-KRAKKKVVKDGPIQISD------CQSSDRNDAASLGNLFLSHANTESIQTSDS----- 901
           S  R +K +++D  + +S          S  NDA  L N   S  + +   ++DS     
Sbjct: 170 SVNRERKVIIRDSWMSVSSESQESYVWGSWINDAYLLPNHVTSAQSEDECTSADSAIEVP 229

Query: 902 -------HKEE----------MGREVSNLT------YQPIEEPW 964
                  H E+             E SN +      YQPIEEPW
Sbjct: 230 RPLLSDKHIEDESFFCDELATFSSENSNFSALFSDNYQPIEEPW 273


>ref|XP_006418595.1| hypothetical protein EUTSA_v10002385mg [Eutrema salsugineum]
           gi|557096523|gb|ESQ37031.1| hypothetical protein
           EUTSA_v10002385mg [Eutrema salsugineum]
          Length = 1009

 Score =  100 bits (249), Expect = 1e-18
 Identities = 73/224 (32%), Positives = 106/224 (47%), Gaps = 35/224 (15%)
 Frame = +2

Query: 398 VWLFTSASSEHSTLLAATKAPKKTHHGEKSLVKVLWNVKADLEDGQQLFVSGSDTLLGSW 577
           ++LF+S+S + ++               K L +V+W V+ADL   + L+V+G  + LGSW
Sbjct: 64  IFLFSSSSEQPASF-------------RKGLCEVVWIVEADLAPNEHLYVTGDPSALGSW 110

Query: 578 DPELAIPMSYCEGKSNCWKTEVQVPRGTTFEYNYFVKCKNSIVDDVRWRFGPTLSLSLPS 757
           +P  AI M Y  G  N W+ +V++  G  F YNYF+K       DV WR GP  SLS+PS
Sbjct: 111 EPNCAISM-YPTGNDNEWEAKVKIASGVNFRYNYFLKAGYGSSFDVIWRPGPQFSLSVPS 169

Query: 758 S-KRAKKKVVKDGPIQISD------CQSSDRNDAASLGNLFLSHANTESIQTSDS----- 901
           S  R +K +++D  + +S          S  NDA  L N   S  + +   ++DS     
Sbjct: 170 SVNRERKVIIRDSWMSVSSESQESYVWGSWINDAYLLPNHVTSAQSEDECTSADSAIEVP 229

Query: 902 -------HKEE----------MGREVSNLT------YQPIEEPW 964
                  H E+             E SN +      YQPIEEPW
Sbjct: 230 RPLLSDKHIEDESFFCDELATFSSENSNFSALFSDNYQPIEEPW 273


>ref|XP_003615550.1| Ribonuclease E [Medicago truncatula] gi|355516885|gb|AES98508.1|
           Ribonuclease E [Medicago truncatula]
          Length = 1009

 Score =  100 bits (248), Expect = 2e-18
 Identities = 68/202 (33%), Positives = 98/202 (48%), Gaps = 38/202 (18%)
 Frame = +2

Query: 488 LVKVLWNVKADLEDGQQLFVSGSDTLLGSWDPELAIPMSYCEGKSNCWKTEVQVPRGTTF 667
           L K++W V+ADLEDG  L+++G   +LG W P +A+ MS  E  +N WK E Q+  G  F
Sbjct: 77  LCKIIWTVEADLEDGHLLYITGDPAVLGCWKPNMAVLMSPTE-HTNIWKAESQIAFGLNF 135

Query: 668 EYNYFVKCKNSIVDDVRWRFGPTLSLSLPSSKRAKKK-VVKD----GPIQISDCQS---- 820
           +YNYF+K K+    D+ W+ GP  SLS+P +  A  + VV+D        IS   +    
Sbjct: 136 KYNYFIKEKSRSSSDIIWKPGPAFSLSVPLTALADNEIVVRDLWIRSNFHISSAHAWNPC 195

Query: 821 -----------------SDRNDAASLGNLFLSHANTESIQTSD------------SHKEE 913
                             +R + + L N FL    TE++   D            S+K+ 
Sbjct: 196 TEETYLLKQPSIFFPVKDERRNMSLLENDFL---KTETLILEDQLFFDSEDMAILSNKDS 252

Query: 914 MGREVSNLTYQPIEEPWLSISL 979
               V +  YQP+EEPWL  SL
Sbjct: 253 HPINVLSENYQPVEEPWLLHSL 274


>gb|EXB34463.1| Ribonuclease E [Morus notabilis]
          Length = 1044

 Score = 97.4 bits (241), Expect = 1e-17
 Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 38/200 (19%)
 Frame = +2

Query: 482 KSLVKVLWNVKADLEDGQQLFVSGSDTLLGSWDPELAIPMSYCEGKSNCWKTEVQVPRGT 661
           K + KV+W ++ +LE GQ L+V+G    LG W+PE+A+ MS  E  +N WK EV++  G 
Sbjct: 117 KGMCKVVWTIETNLEAGQLLYVTGDPNALGCWEPEMAVLMSPTE-HANLWKAEVKIACGV 175

Query: 662 TFEYNYFVKCKNSIVDDVRWRFGPTLSLSLP-SSKRAKKKVVKDGPIQ------------ 802
           +F+YNYF+K + S    + WR GP  SLS+P ++KR+K  VV+D  ++            
Sbjct: 176 SFKYNYFIKEERSPY-GIMWRPGPEFSLSVPATAKRSKNVVVRDSWVRSIKFSPENSLIH 234

Query: 803 -ISDCQ--------SSDRNDAASLGNLFLSHANTESIQTSDS--HKEEMGREVSNLT--- 940
            I D            DR++  +  +  +    TES  +SD+   KE++  +   +T   
Sbjct: 235 WIEDAYLLIHPLILEQDRDEEETTKH--IKSDLTESKLSSDNLKVKEDLNSKNDTVTASY 292

Query: 941 -----------YQPIEEPWL 967
                      YQP+EEPWL
Sbjct: 293 EPISDSFLTERYQPVEEPWL 312


>gb|EOX93566.1| RNAse E/G-like [Theobroma cacao]
          Length = 1015

 Score = 97.1 bits (240), Expect = 1e-17
 Identities = 44/101 (43%), Positives = 67/101 (66%)
 Frame = +2

Query: 482 KSLVKVLWNVKADLEDGQQLFVSGSDTLLGSWDPELAIPMSYCEGKSNCWKTEVQVPRGT 661
           + L +V+W V+ADL +GQ L++SG    LG W+PE AI MS     +N W+ EV++  G 
Sbjct: 85  EGLCEVVWTVEADLAEGQLLYISGESVALGCWEPETAILMSPTV-HANIWRAEVKIAYGV 143

Query: 662 TFEYNYFVKCKNSIVDDVRWRFGPTLSLSLPSSKRAKKKVV 784
           +F+YNYF+K K   + D+ WR GP  SLS+P  K+ ++++V
Sbjct: 144 SFKYNYFIKGKMQPLSDITWRPGPQFSLSVPPCKKQERRIV 184


>ref|XP_002524601.1| hypothetical protein RCOM_1213430 [Ricinus communis]
            gi|223536154|gb|EEF37809.1| hypothetical protein
            RCOM_1213430 [Ricinus communis]
          Length = 963

 Score = 94.4 bits (233), Expect = 9e-17
 Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 39/212 (18%)
 Frame = +2

Query: 488  LVKVLWNVKADLEDGQQLFVSGSDTLLGSWDPELAIPMSYCEGKSNCWKTEVQVPRGTTF 667
            L  V+W V+ADL  GQ L+++G    LG W PE+A+ M   E  +N W TEV++P G   
Sbjct: 19   LCTVVWTVEADLTAGQLLYITGEPISLGGWQPEMALLMCPTE-HANLWTTEVKIPSGVNL 77

Query: 668  EYNYFVKCKNSIVDDVRWRFGPTLSLSLPSSKRAKKKVVKDGPIQISDCQSSDRNDAASL 847
            +YN+F+K +     D+ WR GP  SLS+P  K+  K +V+D  ++ +  +S      + +
Sbjct: 78   KYNFFIKEERPASADLIWRPGPEFSLSIP-VKQDGKIIVRDSWLKNNIERSPPYVWGSWI 136

Query: 848  GNLFLSHANTESIQTSDSHK--------------------------------EEMGREVS 931
            G  +L   +  S QT D H+                                  +G++  
Sbjct: 137  GETYLPVQSLNSAQTRDEHQIMNGVDIVLKESEAFLNDVTFENKLYFNNKHTNSVGQDDQ 196

Query: 932  NLTY----QPIEEPWL---SISLMPSEEGSLP 1006
            NL      QP+EEPWL   SI  + S++  +P
Sbjct: 197  NLVLSERDQPVEEPWLLQSSIIFVISKDKIMP 228


>ref|NP_850987.1| RNAse E/G-like protein [Arabidopsis thaliana]
           gi|25991183|gb|AAN76770.1|AF450479_1 endoribonuclease
           [Arabidopsis thaliana] gi|330250719|gb|AEC05813.1| RNAse
           E/G-like protein [Arabidopsis thaliana]
          Length = 996

 Score = 93.2 bits (230), Expect = 2e-16
 Identities = 65/199 (32%), Positives = 94/199 (47%), Gaps = 37/199 (18%)
 Frame = +2

Query: 482 KSLVKVLWNVKADLEDGQQLFVSGSDTLLGSWDPELAIPMSYCEGKSNCWKTEVQVPRGT 661
           K L +V+W V+ADL   + L+V+G  + LGSW+P+ AI M Y     N W+ +V++  G 
Sbjct: 74  KGLCEVVWIVEADLAANEHLYVTGDPSTLGSWEPDCAISM-YPTENDNEWEAKVKIASGV 132

Query: 662 TFEYNYFVKCKNSIVDDVRWRFGPTLSLSLPSS-KRAKKKVVKDG--------------- 793
            F YNY +K       DV WR GP  SLS+PSS  + +K +++D                
Sbjct: 133 NFRYNYLLKAGYGSSSDVIWRPGPQFSLSVPSSVNQDRKIIIRDSWMSMSISSKSQESYG 192

Query: 794 -----------PIQISDCQSSDR-NDAASLGNLFLSHANTESIQTSDSHKEEM---GREV 928
                      P  ++  QS D    A S   +  +H N + +       +E+     E 
Sbjct: 193 WGSWIDDAYLFPNCVTPAQSEDECTSADSAIEVPRTHLNDKQVGAESFLCDELAAFSSEN 252

Query: 929 SNLT------YQPIEEPWL 967
           SNL+      YQPIEEPWL
Sbjct: 253 SNLSALFSDNYQPIEEPWL 271


>ref|NP_001189510.1| RNAse E/G-like protein [Arabidopsis thaliana]
           gi|460425419|sp|F4IV66.1|RNE_ARATH RecName:
           Full=Ribonuclease E/G-like protein, chloroplastic;
           Short=RNase E/G-like protein; AltName: Full=RNase E;
           Flags: Precursor gi|330250723|gb|AEC05817.1| RNAse
           E/G-like protein [Arabidopsis thaliana]
          Length = 1001

 Score = 93.2 bits (230), Expect = 2e-16
 Identities = 65/199 (32%), Positives = 94/199 (47%), Gaps = 37/199 (18%)
 Frame = +2

Query: 482 KSLVKVLWNVKADLEDGQQLFVSGSDTLLGSWDPELAIPMSYCEGKSNCWKTEVQVPRGT 661
           K L +V+W V+ADL   + L+V+G  + LGSW+P+ AI M Y     N W+ +V++  G 
Sbjct: 79  KGLCEVVWIVEADLAANEHLYVTGDPSTLGSWEPDCAISM-YPTENDNEWEAKVKIASGV 137

Query: 662 TFEYNYFVKCKNSIVDDVRWRFGPTLSLSLPSS-KRAKKKVVKDG--------------- 793
            F YNY +K       DV WR GP  SLS+PSS  + +K +++D                
Sbjct: 138 NFRYNYLLKAGYGSSSDVIWRPGPQFSLSVPSSVNQDRKIIIRDSWMSMSISSKSQESYG 197

Query: 794 -----------PIQISDCQSSDR-NDAASLGNLFLSHANTESIQTSDSHKEEM---GREV 928
                      P  ++  QS D    A S   +  +H N + +       +E+     E 
Sbjct: 198 WGSWIDDAYLFPNCVTPAQSEDECTSADSAIEVPRTHLNDKQVGAESFLCDELAAFSSEN 257

Query: 929 SNLT------YQPIEEPWL 967
           SNL+      YQPIEEPWL
Sbjct: 258 SNLSALFSDNYQPIEEPWL 276


>ref|XP_006469420.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic-like
           isoform X2 [Citrus sinensis]
          Length = 1005

 Score = 92.8 bits (229), Expect = 3e-16
 Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 35/214 (16%)
 Frame = +2

Query: 431 STLLAATKAPKKTHHGEKSLVKVLWNVKADLEDGQQLFVSGSDTLLGSWDPELAIPMSYC 610
           S +++A +   K+    + L +++W V+ADLE GQ L+++G  ++LG WDP++AI MS  
Sbjct: 62  SPIMSANRG--KSASAIQGLCEIVWTVEADLEAGQLLYITGDPSVLGCWDPDMAILMSPT 119

Query: 611 EGKSNCWKTEVQVPRGTTFEYNYFVKCKNSIVDDVRWRFGPTLSLSLPSSKRAKKKV--- 781
           E   N WK EV++  G  F+YN+F+K +     D+ WR GP  SL +P ++  K  V   
Sbjct: 120 E-HENLWKVEVKIACGVNFKYNFFMKGETWSSGDIIWRGGPEFSLLVPFNQDRKILVRDS 178

Query: 782 -----VKDGPIQISDCQ------------SSDRNDAASLGNLFLSHANTESIQTSDSHKE 910
                 K+ P  I D              S    D   + +L      +E      +H +
Sbjct: 179 WMRFNTKNSPTHIWDSWIEETYIPVKSPISVPETDDEIVKHLESDSTESEPFWNDLTHAD 238

Query: 911 EM---------GREVSNLTY------QPIEEPWL 967
           ++           EVSN         QPIEEPWL
Sbjct: 239 QLYSYDDGKTATHEVSNFDMALSERDQPIEEPWL 272


>ref|XP_006469419.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic-like
           isoform X1 [Citrus sinensis]
          Length = 1009

 Score = 92.8 bits (229), Expect = 3e-16
 Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 35/214 (16%)
 Frame = +2

Query: 431 STLLAATKAPKKTHHGEKSLVKVLWNVKADLEDGQQLFVSGSDTLLGSWDPELAIPMSYC 610
           S +++A +   K+    + L +++W V+ADLE GQ L+++G  ++LG WDP++AI MS  
Sbjct: 66  SPIMSANRG--KSASAIQGLCEIVWTVEADLEAGQLLYITGDPSVLGCWDPDMAILMSPT 123

Query: 611 EGKSNCWKTEVQVPRGTTFEYNYFVKCKNSIVDDVRWRFGPTLSLSLPSSKRAKKKV--- 781
           E   N WK EV++  G  F+YN+F+K +     D+ WR GP  SL +P ++  K  V   
Sbjct: 124 E-HENLWKVEVKIACGVNFKYNFFMKGETWSSGDIIWRGGPEFSLLVPFNQDRKILVRDS 182

Query: 782 -----VKDGPIQISDCQ------------SSDRNDAASLGNLFLSHANTESIQTSDSHKE 910
                 K+ P  I D              S    D   + +L      +E      +H +
Sbjct: 183 WMRFNTKNSPTHIWDSWIEETYIPVKSPISVPETDDEIVKHLESDSTESEPFWNDLTHAD 242

Query: 911 EM---------GREVSNLTY------QPIEEPWL 967
           ++           EVSN         QPIEEPWL
Sbjct: 243 QLYSYDDGKTATHEVSNFDMALSERDQPIEEPWL 276


>ref|XP_006447836.1| hypothetical protein CICLE_v10014166mg [Citrus clementina]
           gi|557550447|gb|ESR61076.1| hypothetical protein
           CICLE_v10014166mg [Citrus clementina]
          Length = 960

 Score = 92.8 bits (229), Expect = 3e-16
 Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 35/214 (16%)
 Frame = +2

Query: 431 STLLAATKAPKKTHHGEKSLVKVLWNVKADLEDGQQLFVSGSDTLLGSWDPELAIPMSYC 610
           S +++A +   K+    + L +++W V+ADLE GQ L+++G  ++LG WDP++AI MS  
Sbjct: 17  SPIMSANRG--KSASAIQGLCEIVWTVEADLEAGQLLYITGDPSVLGCWDPDMAILMSPT 74

Query: 611 EGKSNCWKTEVQVPRGTTFEYNYFVKCKNSIVDDVRWRFGPTLSLSLPSSKRAKKKV--- 781
           E   N WK EV++  G  F+YN+F+K +     D+ WR GP  SL +P ++  K  V   
Sbjct: 75  E-HENLWKAEVKIACGVNFKYNFFMKGETWSSGDIIWRGGPEFSLLVPFNQDRKILVRDS 133

Query: 782 -----VKDGPIQISDCQ------------SSDRNDAASLGNLFLSHANTESIQTSDSHKE 910
                 K+ P  I D              S    D   + +L      +E      +H +
Sbjct: 134 WMRFNTKNSPTHIWDSWIEETYIPVKSPISVPETDDEIVKHLESDSTESEPFWNDLTHAD 193

Query: 911 EM---------GREVSNLTY------QPIEEPWL 967
           ++           EVSN         QPIEEPWL
Sbjct: 194 QLYSYDDGKTATHEVSNFDMALSERDQPIEEPWL 227


>ref|XP_004973211.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic-like
           [Setaria italica]
          Length = 1072

 Score = 92.8 bits (229), Expect = 3e-16
 Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 7/157 (4%)
 Frame = +2

Query: 482 KSLVKVLWNVKADLEDGQQLFVSGSDTLLGSWDPELAIPMSYCEGKSNCWKTEVQVPRGT 661
           K    + WN+KAD++DG  +F++G    LG W+  +A+ ++  E   N W  E++VP G 
Sbjct: 97  KGFCTIAWNLKADVQDGYLIFITGDPVTLGCWESNMAVQLAPVEN-DNIWTAEIKVPYGV 155

Query: 662 TFEYNYFVKCKNSIVDDVRWRFGPTLSLSLPSSKRAKKK-VVKDGPIQIS------DCQS 820
            F+YNYFV+ +     D+ WR GP  SLS+PS  R K+  VVKD  ++ S          
Sbjct: 156 HFKYNYFVREEKGSCSDIIWRPGPDYSLSIPSVGRKKQVIVVKDLWMKTSVAGLPAPSWG 215

Query: 821 SDRNDAASLGNLFLSHANTESIQTSDSHKEEMGREVS 931
           S   +A SL   F    N +SI  + S ++   +++S
Sbjct: 216 SWLMEAGSLEGEFFEGGNHQSIVEAHSARDTTDQDLS 252


>ref|XP_006296899.1| hypothetical protein CARUB_v10012891mg [Capsella rubella]
           gi|482565608|gb|EOA29797.1| hypothetical protein
           CARUB_v10012891mg [Capsella rubella]
          Length = 994

 Score = 92.8 bits (229), Expect = 3e-16
 Identities = 65/198 (32%), Positives = 90/198 (45%), Gaps = 37/198 (18%)
 Frame = +2

Query: 482 KSLVKVLWNVKADLEDGQQLFVSGSDTLLGSWDPELAIPMSYCEGKSNCWKTEVQVPRGT 661
           K L +V+W V+ADL   + L+V+G  + LGSW+P+ AI MS  E + N W+ +V++  G 
Sbjct: 74  KGLCEVVWIVEADLAPNEDLYVTGDPSALGSWEPDCAISMSPTENE-NEWEVKVKIASGV 132

Query: 662 TFEYNYFVKCKNSIVDDVRWRFGPTLSLSLPSS-KRAKKKVVKDGPIQIS---------- 808
            F YNY +K       DV WR GP  SLS+PSS  R +K +V+D  +  S          
Sbjct: 133 NFRYNYLLKAGYGSSSDVIWRPGPQFSLSVPSSVSRERKIIVRDSWMSASSKSEESYDWG 192

Query: 809 --------------------DCQSSDRNDAASLGNLFLS--HANTESIQTSDSHKEEMGR 922
                               +C S+D   A  +  L L+      ES    +      G 
Sbjct: 193 SWVDDAYLFSNSVTAAQRKDECNSAD--SAIEVPRLLLNDKQVTDESFFCDELAASSSGN 250

Query: 923 EVSNL----TYQPIEEPW 964
              N      YQPIEEPW
Sbjct: 251 SSFNAFSSDNYQPIEEPW 268