BLASTX nr result

ID: Ephedra27_contig00017461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00017461
         (362 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26762.1| unknown [Picea sitchensis]                              67   3e-09
gb|AEW08009.1| hypothetical protein 0_16864_01, partial [Pinus r...    65   1e-08
ref|XP_004253081.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06
gb|EPS62438.1| hypothetical protein M569_12351, partial [Genlise...    55   7e-06
ref|XP_006644286.1| PREDICTED: pentatricopeptide repeat-containi...    55   1e-05
ref|XP_006590678.1| PREDICTED: pentatricopeptide repeat-containi...    55   1e-05
ref|XP_003537572.1| PREDICTED: pentatricopeptide repeat-containi...    55   1e-05
ref|NP_001043282.1| Os01g0546500 [Oryza sativa Japonica Group] g...    55   1e-05

>gb|ABK26762.1| unknown [Picea sitchensis]
          Length = 298

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 29/65 (44%), Positives = 43/65 (66%)
 Frame = +3

Query: 3   GWSPDLPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVEFLEKHGPFHPHVRD 182
           GW P++ T V +ID FC   R D+AK ++ +FKEKG+    K + E+++K GPF P V +
Sbjct: 227 GWRPNVATFVSIIDGFCKELRSDEAKAVINQFKEKGFIVDEKAVREYMDKKGPFFPSVWE 286

Query: 183 VILGK 197
           V+ GK
Sbjct: 287 VMFGK 291


>gb|AEW08009.1| hypothetical protein 0_16864_01, partial [Pinus radiata]
           gi|383132887|gb|AFG47335.1| hypothetical protein
           0_16864_01, partial [Pinus taeda]
           gi|383132889|gb|AFG47336.1| hypothetical protein
           0_16864_01, partial [Pinus taeda]
           gi|383132891|gb|AFG47337.1| hypothetical protein
           0_16864_01, partial [Pinus taeda]
           gi|383132893|gb|AFG47338.1| hypothetical protein
           0_16864_01, partial [Pinus taeda]
           gi|383132895|gb|AFG47339.1| hypothetical protein
           0_16864_01, partial [Pinus taeda]
           gi|383132897|gb|AFG47340.1| hypothetical protein
           0_16864_01, partial [Pinus taeda]
           gi|383132899|gb|AFG47341.1| hypothetical protein
           0_16864_01, partial [Pinus taeda]
           gi|383132901|gb|AFG47342.1| hypothetical protein
           0_16864_01, partial [Pinus taeda]
           gi|383132903|gb|AFG47343.1| hypothetical protein
           0_16864_01, partial [Pinus taeda]
           gi|383132905|gb|AFG47344.1| hypothetical protein
           0_16864_01, partial [Pinus taeda]
           gi|383132907|gb|AFG47345.1| hypothetical protein
           0_16864_01, partial [Pinus taeda]
           gi|383132909|gb|AFG47346.1| hypothetical protein
           0_16864_01, partial [Pinus taeda]
           gi|383132911|gb|AFG47347.1| hypothetical protein
           0_16864_01, partial [Pinus taeda]
           gi|383132913|gb|AFG47348.1| hypothetical protein
           0_16864_01, partial [Pinus taeda]
           gi|383132915|gb|AFG47349.1| hypothetical protein
           0_16864_01, partial [Pinus taeda]
           gi|383132917|gb|AFG47350.1| hypothetical protein
           0_16864_01, partial [Pinus taeda]
           gi|383132919|gb|AFG47351.1| hypothetical protein
           0_16864_01, partial [Pinus taeda]
           gi|383132921|gb|AFG47352.1| hypothetical protein
           0_16864_01, partial [Pinus taeda]
          Length = 129

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 28/65 (43%), Positives = 42/65 (64%)
 Frame = +3

Query: 3   GWSPDLPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVEFLEKHGPFHPHVRD 182
           GW P++ + V +ID FC   R D+AK ++ +FKEKG+    K + E+++K GPF P V +
Sbjct: 58  GWRPNVASFVSIIDGFCKELRSDEAKGVINQFKEKGFIADEKAVREYMDKKGPFFPSVWE 117

Query: 183 VILGK 197
            I GK
Sbjct: 118 AIFGK 122


>ref|XP_004253081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38150-like isoform 1 [Solanum lycopersicum]
           gi|460415472|ref|XP_004253082.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g38150-like isoform 2 [Solanum lycopersicum]
          Length = 340

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/65 (41%), Positives = 41/65 (63%)
 Frame = +3

Query: 3   GWSPDLPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVEFLEKHGPFHPHVRD 182
           G SP++ T V L+D FC  +  +DA+ ++   ++KG+    K + EFL+K GPF P V +
Sbjct: 267 GHSPNVVTFVTLVDGFCKEKSLEDAQNMIKTVRQKGFIVDDKAVREFLDKKGPFLPVVWE 326

Query: 183 VILGK 197
            ILGK
Sbjct: 327 AILGK 331


>gb|EPS62438.1| hypothetical protein M569_12351, partial [Genlisea aurea]
          Length = 272

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/64 (39%), Positives = 40/64 (62%)
 Frame = +3

Query: 3   GWSPDLPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVEFLEKHGPFHPHVRD 182
           G+SP+L T  GL++ +C  +  ++AK L+   K+KG+    K + E+L+K GPF   V +
Sbjct: 200 GYSPNLATFTGLVNGWCQEKGLEEAKTLVGAMKQKGFSVEEKAVREYLDKKGPFSSPVWE 259

Query: 183 VILG 194
            ILG
Sbjct: 260 AILG 263


>ref|XP_006644286.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38150-like [Oryza brachyantha]
          Length = 339

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/65 (41%), Positives = 41/65 (63%)
 Frame = +3

Query: 3   GWSPDLPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVEFLEKHGPFHPHVRD 182
           G SP+  T VGL+D  C A+  ++A+KL+  F+++ +    K I E L+K GPF P + +
Sbjct: 268 GHSPNAMTFVGLVDGVCKAKGVEEAEKLVRSFQDRNFAIDEKSIREHLDKKGPFSPVIWE 327

Query: 183 VILGK 197
           VI GK
Sbjct: 328 VIFGK 332


>ref|XP_006590678.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38150-like isoform X2 [Glycine max]
          Length = 395

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/65 (38%), Positives = 39/65 (60%)
 Frame = +3

Query: 3   GWSPDLPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVEFLEKHGPFHPHVRD 182
           G SP++ T VGL+D FC+ +  ++AK  +    +KG+    K + +FL+K  PF P V +
Sbjct: 324 GHSPNVTTFVGLVDGFCNEKGVEEAKSAIKTLTDKGFVVNEKAVRQFLDKKAPFSPSVWE 383

Query: 183 VILGK 197
            I GK
Sbjct: 384 AIFGK 388


>ref|XP_003537572.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38150-like isoform X1 [Glycine max]
          Length = 388

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/65 (38%), Positives = 39/65 (60%)
 Frame = +3

Query: 3   GWSPDLPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVEFLEKHGPFHPHVRD 182
           G SP++ T VGL+D FC+ +  ++AK  +    +KG+    K + +FL+K  PF P V +
Sbjct: 317 GHSPNVTTFVGLVDGFCNEKGVEEAKSAIKTLTDKGFVVNEKAVRQFLDKKAPFSPSVWE 376

Query: 183 VILGK 197
            I GK
Sbjct: 377 AIFGK 381


>ref|NP_001043282.1| Os01g0546500 [Oryza sativa Japonica Group]
           gi|20146451|dbj|BAB89231.1| fertility restorer -like
           protein [Oryza sativa Japonica Group]
           gi|113532813|dbj|BAF05196.1| Os01g0546500 [Oryza sativa
           Japonica Group] gi|215697396|dbj|BAG91390.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222618638|gb|EEE54770.1| hypothetical protein
           OsJ_02158 [Oryza sativa Japonica Group]
          Length = 342

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/65 (41%), Positives = 41/65 (63%)
 Frame = +3

Query: 3   GWSPDLPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVEFLEKHGPFHPHVRD 182
           G SP+  T VGL+D  C A+  ++A+KL+  F+++ +    K I E L+K GPF P + +
Sbjct: 271 GHSPNAMTFVGLVDEVCKAKGVEEAEKLVRSFQDRNFAIDEKSIREHLDKKGPFSPVIWE 330

Query: 183 VILGK 197
           VI GK
Sbjct: 331 VIFGK 335


Top