BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00017358
         (484 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    178   8e-43
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   177   1e-42
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...   177   1e-42
gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]       177   2e-42
emb|CBI21038.3| unnamed protein product [Vitis vinifera]              177   2e-42
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   177   2e-42
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...   176   2e-42
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     176   2e-42
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    176   2e-42
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]     176   2e-42
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   176   3e-42
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   175   6e-42
gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus pe...   174   1e-41
ref|XP_006404133.1| hypothetical protein EUTSA_v10010107mg [Eutr...   174   1e-41
dbj|BAJ34538.1| unnamed protein product [Thellungiella halophila]     174   1e-41
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   173   2e-41
ref|XP_002877681.1| RNA-dependent RNA polymerase 6 [Arabidopsis ...   172   3e-41
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...   171   9e-41
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   171   1e-40
ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   170   2e-40

>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  178 bits (451), Expect = 8e-43
 Identities = 92/162 (56%), Positives = 112/162 (69%), Gaps = 1/162 (0%)
 Frame = -1

Query: 484 VGELKQVLKGHKFLNDPTLTSDTMEIYRLAVTPTKAYCLPPEIELSNSVLRQYRSVSDRF 305
           VG  K +LK  K L+      D +E+ RL +TPTKAYCLPP +ELSN VLR Y+ V+DRF
Sbjct: 388 VGIQKWLLKNPKLLDRTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRF 447

Query: 304 LRVSFMDENMEIMGSGSLTIATAPIAKEVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYS 128
           LRV+FMDE M  +    LT   A I +E++S+S P RTA+F++VK +L KGF LCGR YS
Sbjct: 448 LRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSKGFHLCGRKYS 507

Query: 127 FLAFSANQL*DHSSWFFANGENVTVEEI*EWMGRFYNSNVAK 2
           FLAFSANQL D S+WFFA    + V  I  WMGRF N NVAK
Sbjct: 508 FLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAK 549


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1200

 Score =  177 bits (450), Expect = 1e-42
 Identities = 83/156 (53%), Positives = 114/156 (73%), Gaps = 1/156 (0%)
 Frame = -1

Query: 466 VLKGHKFLNDPTLTSDTMEIYRLAVTPTKAYCLPPEIELSNSVLRQYRSVSDRFLRVSFM 287
           +LK      +P    D +EI RL +TPTKAYCLPPE+ELSN VLR+Y+ V+DRFLRV+FM
Sbjct: 397 LLKNPNLFKNPKQLGDVVEIRRLVITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFM 456

Query: 286 DENMEIMGSGSLTIATAPIAKEVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSA 110
           DE ++ M S  L    API ++++S+S P +T +F++V+ +L +GF LCGR YSFLAFSA
Sbjct: 457 DEGLQRMNSNVLNYYVAPIVRDITSNSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSA 516

Query: 109 NQL*DHSSWFFANGENVTVEEI*EWMGRFYNSNVAK 2
           NQL D S+WFF+   N++V ++  WMG+F N N+AK
Sbjct: 517 NQLRDQSAWFFSEERNISVLDVKSWMGKFTNRNIAK 552


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1198

 Score =  177 bits (449), Expect = 1e-42
 Identities = 85/156 (54%), Positives = 111/156 (71%), Gaps = 1/156 (0%)
 Frame = -1

Query: 466 VLKGHKFLNDPTLTSDTMEIYRLAVTPTKAYCLPPEIELSNSVLRQYRSVSDRFLRVSFM 287
           +LK  KF  +     D  EI RL +TPTKAYCLPPE+ELSN VLR+Y+ V+DRFLRV+FM
Sbjct: 394 LLKNPKFFKNQKKLDDIAEIRRLVITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFM 453

Query: 286 DENMEIMGSGSLTIATAPIAKEVSS-SSPYRTAVFRKVKELLRKGFDLCGRHYSFLAFSA 110
           DE ++ M S +L    API + ++S S P +T +F++V+ +L +GF LCGR YSFLAFS+
Sbjct: 454 DEGLQTMNSNALNYFAAPIVRAITSYSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSS 513

Query: 109 NQL*DHSSWFFANGENVTVEEI*EWMGRFYNSNVAK 2
           NQL D S+WFFA   N+ V  I  WMG+F N N+AK
Sbjct: 514 NQLRDRSAWFFAEDRNINVMAIKSWMGKFTNKNIAK 549


>gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]
          Length = 1194

 Score =  177 bits (448), Expect = 2e-42
 Identities = 89/156 (57%), Positives = 111/156 (71%), Gaps = 1/156 (0%)
 Frame = -1

Query: 466 VLKGHKFLNDPTLTSDTMEIYRLAVTPTKAYCLPPEIELSNSVLRQYRSVSDRFLRVSFM 287
           +L+  K L  P    D  E+ RL +TPT+AYCLPPE+ELSN VLR+Y+ VSDRFLRV+FM
Sbjct: 390 LLRNPKLLKIPRQLDDIAEVRRLVITPTRAYCLPPEVELSNRVLRKYKEVSDRFLRVTFM 449

Query: 286 DENMEIMGSGSLTIATAPIAKEV-SSSSPYRTAVFRKVKELLRKGFDLCGRHYSFLAFSA 110
           DE M+ M    LT   API KE+ S+S+  +T VF++VK LL  GF LCG+ YSFLAFS+
Sbjct: 450 DEGMQTMNLNVLTYYPAPIVKELTSNSTSQKTKVFKRVKSLLTDGFYLCGQRYSFLAFSS 509

Query: 109 NQL*DHSSWFFANGENVTVEEI*EWMGRFYNSNVAK 2
           NQL D S+WFFA    +TV  I +WMGRF N N+AK
Sbjct: 510 NQLRDRSAWFFAEDGKITVNGIKKWMGRFNNRNIAK 545


>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  177 bits (448), Expect = 2e-42
 Identities = 88/158 (55%), Positives = 111/158 (70%), Gaps = 1/158 (0%)
 Frame = -1

Query: 472 KQVLKGHKFLNDPTLTSDTMEIYRLAVTPTKAYCLPPEIELSNSVLRQYRSVSDRFLRVS 293
           K +LK  K L  P    D +E+ RL +TP+KAYCLPPE+ELSN VLR Y+ VSDRFLRV+
Sbjct: 232 KWLLKNPKLLKSPKELDDIVEVRRLVITPSKAYCLPPEVELSNRVLRNYKEVSDRFLRVT 291

Query: 292 FMDENMEIMGSGSLTIATAPIAKEVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAF 116
           FMDE M+ + +  L    API K ++S+S P +T VF++VK +L  GF LCGR YSFLAF
Sbjct: 292 FMDEGMQTINANVLNYYVAPIVKVITSNSFPQKTRVFKRVKTILTDGFYLCGRKYSFLAF 351

Query: 115 SANQL*DHSSWFFANGENVTVEEI*EWMGRFYNSNVAK 2
           S+NQL D S+WFFA  +  +V  I  WMG+F N NVAK
Sbjct: 352 SSNQLRDRSAWFFAEDKKTSVRAIKSWMGKFTNRNVAK 389


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  177 bits (448), Expect = 2e-42
 Identities = 88/158 (55%), Positives = 111/158 (70%), Gaps = 1/158 (0%)
 Frame = -1

Query: 472 KQVLKGHKFLNDPTLTSDTMEIYRLAVTPTKAYCLPPEIELSNSVLRQYRSVSDRFLRVS 293
           K +LK  K L  P    D +E+ RL +TP+KAYCLPPE+ELSN VLR Y+ VSDRFLRV+
Sbjct: 394 KWLLKNPKLLKSPKELDDIVEVRRLVITPSKAYCLPPEVELSNRVLRNYKEVSDRFLRVT 453

Query: 292 FMDENMEIMGSGSLTIATAPIAKEVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAF 116
           FMDE M+ + +  L    API K ++S+S P +T VF++VK +L  GF LCGR YSFLAF
Sbjct: 454 FMDEGMQTINANVLNYYVAPIVKVITSNSFPQKTRVFKRVKTILTDGFYLCGRKYSFLAF 513

Query: 115 SANQL*DHSSWFFANGENVTVEEI*EWMGRFYNSNVAK 2
           S+NQL D S+WFFA  +  +V  I  WMG+F N NVAK
Sbjct: 514 SSNQLRDRSAWFFAEDKKTSVRAIKSWMGKFTNRNVAK 551


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score =  176 bits (447), Expect = 2e-42
 Identities = 91/162 (56%), Positives = 111/162 (68%), Gaps = 1/162 (0%)
 Frame = -1

Query: 484 VGELKQVLKGHKFLNDPTLTSDTMEIYRLAVTPTKAYCLPPEIELSNSVLRQYRSVSDRF 305
           VG  K +LK  K L       D +E+ RL +TPTKAYCLPP +ELSN VLR Y+ V+DRF
Sbjct: 388 VGIQKWLLKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRF 447

Query: 304 LRVSFMDENMEIMGSGSLTIATAPIAKEVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYS 128
           LRV+FMDE M  +    LT   A I +E++S+S P RTA+F++VK +L +GF LCGR YS
Sbjct: 448 LRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSRGFHLCGRKYS 507

Query: 127 FLAFSANQL*DHSSWFFANGENVTVEEI*EWMGRFYNSNVAK 2
           FLAFSANQL D S+WFFA    + V  I  WMGRF N NVAK
Sbjct: 508 FLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAK 549


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  176 bits (447), Expect = 2e-42
 Identities = 91/161 (56%), Positives = 111/161 (68%), Gaps = 1/161 (0%)
 Frame = -1

Query: 481 GELKQVLKGHKFLNDPTLTSDTMEIYRLAVTPTKAYCLPPEIELSNSVLRQYRSVSDRFL 302
           G  K +LK  K L+      D +E+ RL +TPTKAYCLPP +ELSN VLR Y+ V+DRFL
Sbjct: 389 GIQKWLLKNPKLLDRTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRFL 448

Query: 301 RVSFMDENMEIMGSGSLTIATAPIAKEVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSF 125
           RV+FMDE M  +    LT   A I +E++S+S P RTA+F++VK +L KGF LCGR YSF
Sbjct: 449 RVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSKGFHLCGRKYSF 508

Query: 124 LAFSANQL*DHSSWFFANGENVTVEEI*EWMGRFYNSNVAK 2
           LAFSANQL D S+WFFA    + V  I  WMGRF N NVAK
Sbjct: 509 LAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAK 549


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  176 bits (447), Expect = 2e-42
 Identities = 91/162 (56%), Positives = 111/162 (68%), Gaps = 1/162 (0%)
 Frame = -1

Query: 484 VGELKQVLKGHKFLNDPTLTSDTMEIYRLAVTPTKAYCLPPEIELSNSVLRQYRSVSDRF 305
           VG  K +LK  K L       D +E+ RL +TPTKAYCLPP +ELSN VLR Y+ V+DRF
Sbjct: 388 VGIQKWLLKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRF 447

Query: 304 LRVSFMDENMEIMGSGSLTIATAPIAKEVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYS 128
           LRV+FMDE M  +    LT   A I +E++S+S P RTA+F++VK +L +GF LCGR YS
Sbjct: 448 LRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSRGFHLCGRKYS 507

Query: 127 FLAFSANQL*DHSSWFFANGENVTVEEI*EWMGRFYNSNVAK 2
           FLAFSANQL D S+WFFA    + V  I  WMGRF N NVAK
Sbjct: 508 FLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAK 549


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score =  176 bits (447), Expect = 2e-42
 Identities = 91/162 (56%), Positives = 111/162 (68%), Gaps = 1/162 (0%)
 Frame = -1

Query: 484 VGELKQVLKGHKFLNDPTLTSDTMEIYRLAVTPTKAYCLPPEIELSNSVLRQYRSVSDRF 305
           VG  K +LK  K L       D +E+ RL +TPTKAYCLPP +ELSN VLR Y+ V+DRF
Sbjct: 388 VGIRKWLLKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRF 447

Query: 304 LRVSFMDENMEIMGSGSLTIATAPIAKEVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYS 128
           LRV+FMDE M  +    LT   A I +E++S+S P RTA+F++VK +L +GF LCGR YS
Sbjct: 448 LRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSRGFHLCGRKYS 507

Query: 127 FLAFSANQL*DHSSWFFANGENVTVEEI*EWMGRFYNSNVAK 2
           FLAFSANQL D S+WFFA    + V  I  WMGRF N NVAK
Sbjct: 508 FLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAK 549


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  176 bits (446), Expect = 3e-42
 Identities = 91/161 (56%), Positives = 110/161 (68%), Gaps = 1/161 (0%)
 Frame = -1

Query: 481 GELKQVLKGHKFLNDPTLTSDTMEIYRLAVTPTKAYCLPPEIELSNSVLRQYRSVSDRFL 302
           G  K +LK  K L       D +E+ RL +TPTKAYCLPP +ELSN VLR Y+ V+DRFL
Sbjct: 389 GIQKWLLKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRFL 448

Query: 301 RVSFMDENMEIMGSGSLTIATAPIAKEVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSF 125
           RV+FMDE M  +    LT   A I +E++S+S P RTA+F++VK +L KGF LCGR YSF
Sbjct: 449 RVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSKGFHLCGRKYSF 508

Query: 124 LAFSANQL*DHSSWFFANGENVTVEEI*EWMGRFYNSNVAK 2
           LAFSANQL D S+WFFA    + V  I  WMGRF N NVAK
Sbjct: 509 LAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAK 549


>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca
           subsp. vesca]
          Length = 1197

 Score =  175 bits (443), Expect = 6e-42
 Identities = 82/156 (52%), Positives = 112/156 (71%), Gaps = 1/156 (0%)
 Frame = -1

Query: 466 VLKGHKFLNDPTLTSDTMEIYRLAVTPTKAYCLPPEIELSNSVLRQYRSVSDRFLRVSFM 287
           +L+  K + +P    D  E+ RL +TPTKAYCLPPE+ELSN VLR+Y+ V+DRFLRV+FM
Sbjct: 394 LLRNPKLIKNPKRLDDIAEVRRLVITPTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFM 453

Query: 286 DENMEIMGSGSLTIATAPIAKEVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSA 110
           DE M+ M S  +    API KE++ ++ P +T V+ +++ +L  GF LCGR YSFLAFS+
Sbjct: 454 DEGMQTMNSNVMNSYVAPIVKEITENTFPQKTKVYVRIRAILMNGFHLCGRKYSFLAFSS 513

Query: 109 NQL*DHSSWFFANGENVTVEEI*EWMGRFYNSNVAK 2
           NQL D S+WFFA  + ++++ I  WMGRF N NVAK
Sbjct: 514 NQLRDRSAWFFAEDKTISIQGIKNWMGRFTNRNVAK 549


>gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
          Length = 1196

 Score =  174 bits (441), Expect = 1e-41
 Identities = 86/156 (55%), Positives = 112/156 (71%), Gaps = 1/156 (0%)
 Frame = -1

Query: 466 VLKGHKFLNDPTLTSDTMEIYRLAVTPTKAYCLPPEIELSNSVLRQYRSVSDRFLRVSFM 287
           +LK  K + DP    D  E+ RL +TPTKAYCLPPE+ELSN VLR+Y+ V+DRFLRV+FM
Sbjct: 393 LLKNPKLVKDPKRLDDIAEVRRLVITPTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFM 452

Query: 286 DENMEIMGSGSLTIATAPIAKEVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSA 110
           DE M+ + S  L    API KE++S+S   +T VF++ + +L  GF LCGR Y+FLAFS+
Sbjct: 453 DEGMQKINSNVLNYYVAPIVKEITSNSFLQKTNVFKRFRTILNDGFYLCGRKYTFLAFSS 512

Query: 109 NQL*DHSSWFFANGENVTVEEI*EWMGRFYNSNVAK 2
           NQL D S+WFFA   N++V +I  WMG+F N NVAK
Sbjct: 513 NQLRDRSAWFFAECVNISVGKITSWMGKFNNKNVAK 548


>ref|XP_006404133.1| hypothetical protein EUTSA_v10010107mg [Eutrema salsugineum]
           gi|557105252|gb|ESQ45586.1| hypothetical protein
           EUTSA_v10010107mg [Eutrema salsugineum]
          Length = 927

 Score =  174 bits (440), Expect = 1e-41
 Identities = 89/156 (57%), Positives = 113/156 (72%), Gaps = 1/156 (0%)
 Frame = -1

Query: 466 VLKGHKFLNDPTLTSDTMEIYRLAVTPTKAYCLPPEIELSNSVLRQYRSVSDRFLRVSFM 287
           VLK  K L     + D  EI RL +TPT+AYCLPPE+ELSN VLR+Y++VS+RFLRV+FM
Sbjct: 408 VLKNPKLLVSHERSDDISEIRRLVITPTRAYCLPPEVELSNRVLRKYKAVSERFLRVTFM 467

Query: 286 DENMEIMGSGSLTIATAPIAKEVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSA 110
           DE+M+ M S  L+   API K+++SSS   +T VF++VK LL  GF LCGR YSFLAFS+
Sbjct: 468 DESMQTMNSNVLSYFVAPIVKDLTSSSFSQKTHVFKRVKTLLTDGFKLCGRKYSFLAFSS 527

Query: 109 NQL*DHSSWFFANGENVTVEEI*EWMGRFYNSNVAK 2
           NQL D S+WFF+   N  V +I  WMG+F + NVAK
Sbjct: 528 NQLRDRSAWFFSEDGNTRVSDIKIWMGKFKDKNVAK 563


>dbj|BAJ34538.1| unnamed protein product [Thellungiella halophila]
          Length = 998

 Score =  174 bits (440), Expect = 1e-41
 Identities = 89/156 (57%), Positives = 113/156 (72%), Gaps = 1/156 (0%)
 Frame = -1

Query: 466 VLKGHKFLNDPTLTSDTMEIYRLAVTPTKAYCLPPEIELSNSVLRQYRSVSDRFLRVSFM 287
           VLK  K L     + D  EI RL +TPT+AYCLPPE+ELSN VLR+Y++VS+RFLRV+FM
Sbjct: 392 VLKNPKLLVSHERSDDISEIRRLVITPTRAYCLPPEVELSNRVLRKYKAVSERFLRVTFM 451

Query: 286 DENMEIMGSGSLTIATAPIAKEVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSA 110
           DE+M+ M S  L+   API K+++SSS   +T VF++VK LL  GF LCGR YSFLAFS+
Sbjct: 452 DESMQTMNSNVLSYFVAPIVKDLTSSSFSQKTHVFKRVKTLLTDGFKLCGRKYSFLAFSS 511

Query: 109 NQL*DHSSWFFANGENVTVEEI*EWMGRFYNSNVAK 2
           NQL D S+WFF+   N  V +I  WMG+F + NVAK
Sbjct: 512 NQLRDRSAWFFSEDGNTRVSDIKIWMGKFKDKNVAK 547


>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
           tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
           tuberosum]
          Length = 1198

 Score =  173 bits (439), Expect = 2e-41
 Identities = 88/158 (55%), Positives = 107/158 (67%), Gaps = 1/158 (0%)
 Frame = -1

Query: 472 KQVLKGHKFLNDPTLTSDTMEIYRLAVTPTKAYCLPPEIELSNSVLRQYRSVSDRFLRVS 293
           K + K    L       D +E+ RL +TPTKAYCLPP +ELSN VLR+Y+ VSDRFLRV+
Sbjct: 393 KWLFKNPNLLERTGQLDDVVEVRRLVITPTKAYCLPPTVELSNRVLRKYKHVSDRFLRVT 452

Query: 292 FMDENMEIMGSGSLTIATAPIAKEVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAF 116
           FMDE M  +    LT   A I +E++SSS P RT +F++VK +L KGF LCGR YSFLAF
Sbjct: 453 FMDEGMRNLNRNVLTYYAATIVREITSSSNPQRTGIFQRVKSILSKGFYLCGRRYSFLAF 512

Query: 115 SANQL*DHSSWFFANGENVTVEEI*EWMGRFYNSNVAK 2
           SANQL D S+WFFA    + V  I  WMG+F N NVAK
Sbjct: 513 SANQLRDRSAWFFAEAPEIRVPNIINWMGKFGNRNVAK 550


>ref|XP_002877681.1| RNA-dependent RNA polymerase 6 [Arabidopsis lyrata subsp. lyrata]
           gi|297323519|gb|EFH53940.1| RNA-dependent RNA polymerase
           6 [Arabidopsis lyrata subsp. lyrata]
          Length = 1197

 Score =  172 bits (437), Expect = 3e-41
 Identities = 87/156 (55%), Positives = 112/156 (71%), Gaps = 1/156 (0%)
 Frame = -1

Query: 466 VLKGHKFLNDPTLTSDTMEIYRLAVTPTKAYCLPPEIELSNSVLRQYRSVSDRFLRVSFM 287
           +LK  K L     + D  EI RL +TPT+AYCLPPE+ELSN VLR+YR+V++RFLRV+FM
Sbjct: 392 ILKNPKLLGGHEQSEDISEIRRLVITPTRAYCLPPEVELSNRVLRKYRAVAERFLRVTFM 451

Query: 286 DENMEIMGSGSLTIATAPIAKEVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSA 110
           DE+M+ + S  L+   API K+++SSS   +T VF++VK +L  GF LCGR YSFLAFSA
Sbjct: 452 DESMQTINSNVLSYFVAPIVKDLTSSSFSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSA 511

Query: 109 NQL*DHSSWFFANGENVTVEEI*EWMGRFYNSNVAK 2
           NQL D S+WFFA      V +I  WMG+F + NVAK
Sbjct: 512 NQLRDSSAWFFAEDGKTRVSDIKAWMGKFKDKNVAK 547


>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
           gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
           6 [Gossypium hirsutum]
          Length = 1196

 Score =  171 bits (433), Expect = 9e-41
 Identities = 86/156 (55%), Positives = 110/156 (70%), Gaps = 1/156 (0%)
 Frame = -1

Query: 466 VLKGHKFLNDPTLTSDTMEIYRLAVTPTKAYCLPPEIELSNSVLRQYRSVSDRFLRVSFM 287
           +LK  K    P    D +EI RL +TPTKAYCL PE+ELSN VLR+Y+ V+DRFLRV+FM
Sbjct: 393 LLKNPKLFKSPPQLDDIVEIRRLVITPTKAYCLLPEVELSNRVLRKYKDVADRFLRVTFM 452

Query: 286 DENMEIMGSGSLTIATAPIAKEVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSA 110
           DE M+IM +  LT   A I ++V+S+S   +T VF++VK +L  GF LCGR YSFLAFSA
Sbjct: 453 DEGMQIMNANVLTYYNAAIVRDVTSTSFSQKTGVFKRVKSILTDGFYLCGRKYSFLAFSA 512

Query: 109 NQL*DHSSWFFANGENVTVEEI*EWMGRFYNSNVAK 2
           NQL D ++WFFA    + V +I  WMG+F N N+AK
Sbjct: 513 NQLRDRAAWFFAEDGKINVLQIIGWMGKFTNRNIAK 548


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
           gi|223545464|gb|EEF46969.1| RNA-dependent RNA
           polymerase, putative [Ricinus communis]
          Length = 1203

 Score =  171 bits (432), Expect = 1e-40
 Identities = 81/156 (51%), Positives = 112/156 (71%), Gaps = 1/156 (0%)
 Frame = -1

Query: 466 VLKGHKFLNDPTLTSDTMEIYRLAVTPTKAYCLPPEIELSNSVLRQYRSVSDRFLRVSFM 287
           +LK  K         D +EI RLA+TPT+AYCLPPE+ELSN VLR+Y+ ++D+FLRV+FM
Sbjct: 394 LLKNPKLFRSSKQLDDIVEIRRLAITPTRAYCLPPEVELSNRVLRRYKDIADQFLRVTFM 453

Query: 286 DENMEIMGSGSLTIATAPIAKEVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSA 110
           DE ++ M + +LT   API ++++S+S   +T +F++VK +L  GF LCGR YSFLAFS+
Sbjct: 454 DEGLQTMNANTLTYYCAPIVRDITSNSFSQKTRIFKRVKSILTDGFYLCGRKYSFLAFSS 513

Query: 109 NQL*DHSSWFFANGENVTVEEI*EWMGRFYNSNVAK 2
           NQL D S+WFFA     +V +I  WMG+F N N+AK
Sbjct: 514 NQLRDRSAWFFAEDGKTSVSKIRNWMGKFTNRNIAK 549


>ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Cicer
           arietinum] gi|502132369|ref|XP_004501326.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X3 [Cicer
           arietinum]
          Length = 1201

 Score =  170 bits (431), Expect = 2e-40
 Identities = 80/141 (56%), Positives = 106/141 (75%), Gaps = 1/141 (0%)
 Frame = -1

Query: 421 DTMEIYRLAVTPTKAYCLPPEIELSNSVLRQYRSVSDRFLRVSFMDENMEIMGSGSLTIA 242
           D ME+ RL +TPTKAYC+ PE+ELSN VLR++R VSDRFLRV+FMDE M+ +   +L   
Sbjct: 409 DIMEVRRLVITPTKAYCIAPEVELSNRVLRRFREVSDRFLRVTFMDEGMQTLNVHALNYY 468

Query: 241 TAPIAKEVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSANQL*DHSSWFFANGE 65
            API KE++S+S P +T ++++VK +L +GF  CGR YSFLAFS+NQL D S+WFFA   
Sbjct: 469 VAPIVKEITSNSFPQKTRIYKRVKTILEEGFYFCGRKYSFLAFSSNQLRDRSAWFFAEDN 528

Query: 64  NVTVEEI*EWMGRFYNSNVAK 2
           N+T ++I  WMG+F   NVAK
Sbjct: 529 NITCDDIRNWMGKFNQRNVAK 549