BLASTX nr result
ID: Ephedra27_contig00017306
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00017306
(438 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu... 68 1e-09
gb|EOX93477.1| CCCH-type zinc fingerfamily protein with RNA-bind... 67 3e-09
gb|EOX93474.1| CCCH-type zinc fingerfamily protein with RNA-bind... 67 3e-09
ref|XP_002513526.1| nucleic acid binding protein, putative [Rici... 67 3e-09
ref|XP_004513268.1| PREDICTED: zinc finger CCCH domain-containin... 65 7e-09
ref|XP_004293162.1| PREDICTED: zinc finger CCCH domain-containin... 65 7e-09
ref|XP_002980093.1| hypothetical protein SELMODRAFT_112009 [Sela... 64 2e-08
ref|XP_002992677.1| hypothetical protein SELMODRAFT_236569 [Sela... 64 2e-08
ref|XP_006365193.1| PREDICTED: zinc finger CCCH domain-containin... 64 2e-08
ref|XP_006365192.1| PREDICTED: zinc finger CCCH domain-containin... 64 2e-08
ref|XP_006365191.1| PREDICTED: zinc finger CCCH domain-containin... 64 2e-08
ref|XP_004303082.1| PREDICTED: zinc finger CCCH domain-containin... 64 2e-08
ref|XP_006368576.1| hypothetical protein POPTR_0001s05760g [Popu... 64 3e-08
ref|XP_006386017.1| hypothetical protein POPTR_0003s20310g [Popu... 64 3e-08
ref|XP_002303898.2| hypothetical protein POPTR_0003s20310g [Popu... 64 3e-08
ref|XP_006386016.1| hypothetical protein POPTR_0003s20310g [Popu... 64 3e-08
gb|EOY32749.1| Zinc finger family protein / RNA recognition moti... 64 3e-08
gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus pe... 64 3e-08
ref|XP_002332416.1| predicted protein [Populus trichocarpa] 64 3e-08
gb|AAR14273.1| predicted protein [Populus tremula x Populus alba] 64 3e-08
>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
gi|223525472|gb|EEF28048.1| RNA binding protein,
putative [Ricinus communis]
Length = 578
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/61 (50%), Positives = 47/61 (77%)
Frame = -1
Query: 213 SRQIVFSRIQDIDPENVSKIIGYFLVQDLREEQMRCLAFGSNSFLLNMVSKAKNDLGLYT 34
S ++V++RIQ ++PENVSKIIGY L+QD E +M LAF ++ + ++++KAK+DLGL
Sbjct: 6 STKVVYNRIQKLEPENVSKIIGYLLLQDHSEREMIRLAFSPDNLIYSLITKAKSDLGLNK 65
Query: 33 P 31
P
Sbjct: 66 P 66
>gb|EOX93477.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
putative isoform 4, partial [Theobroma cacao]
Length = 430
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/58 (53%), Positives = 47/58 (81%)
Frame = -1
Query: 213 SRQIVFSRIQDIDPENVSKIIGYFLVQDLREEQMRCLAFGSNSFLLNMVSKAKNDLGL 40
S ++V++RIQ ++PENVSKIIGYFL+QD + M LAF S++ LL++++KAK++L L
Sbjct: 6 STKVVYNRIQQLEPENVSKIIGYFLLQDQGDRDMIRLAFCSDTLLLSLINKAKSELSL 63
>gb|EOX93474.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
putative isoform 1 [Theobroma cacao]
gi|508701579|gb|EOX93475.1| CCCH-type zinc fingerfamily
protein with RNA-binding domain, putative isoform 1
[Theobroma cacao] gi|508701580|gb|EOX93476.1| CCCH-type
zinc fingerfamily protein with RNA-binding domain,
putative isoform 1 [Theobroma cacao]
Length = 545
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/58 (53%), Positives = 47/58 (81%)
Frame = -1
Query: 213 SRQIVFSRIQDIDPENVSKIIGYFLVQDLREEQMRCLAFGSNSFLLNMVSKAKNDLGL 40
S ++V++RIQ ++PENVSKIIGYFL+QD + M LAF S++ LL++++KAK++L L
Sbjct: 6 STKVVYNRIQQLEPENVSKIIGYFLLQDQGDRDMIRLAFCSDTLLLSLINKAKSELSL 63
>ref|XP_002513526.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223547434|gb|EEF48929.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 686
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/57 (56%), Positives = 41/57 (71%)
Frame = -1
Query: 204 IVFSRIQDIDPENVSKIIGYFLVQDLREEQMRCLAFGSNSFLLNMVSKAKNDLGLYT 34
I+ S+I+ IDPEN SKI+GY L+QDL E + LAFGS + L N++ KAK LGL T
Sbjct: 9 ILMSKIKSIDPENASKIMGYILIQDLNENDLLSLAFGSETLLHNVIIKAKTHLGLST 65
>ref|XP_004513268.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Cicer arietinum]
Length = 655
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/63 (50%), Positives = 46/63 (73%)
Frame = -1
Query: 207 QIVFSRIQDIDPENVSKIIGYFLVQDLREEQMRCLAFGSNSFLLNMVSKAKNDLGLYTPR 28
+IVFSRIQ++DPEN SKI+G L+QD E++M LAFG S + +++ KA+ +LGL P+
Sbjct: 8 RIVFSRIQNMDPENASKIMGVLLIQDHGEKEMIRLAFGPESLVHSVIFKARKELGLILPQ 67
Query: 27 YGN 19
N
Sbjct: 68 PSN 70
>ref|XP_004293162.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Fragaria vesca subsp. vesca]
Length = 614
Score = 65.5 bits (158), Expect = 7e-09
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Frame = -1
Query: 207 QIVFSRIQDIDPENVSKIIGYFLVQDLREEQMRCLAFGSNSFLLNMVSKAKNDLGLY--- 37
+IVFSRIQ++D EN SKI+GY L+QD E++M LAFG + L N++ AK LGL
Sbjct: 8 KIVFSRIQNLDSENASKIMGYLLIQDQSEKEMIRLAFGPETLLHNLIINAKTQLGLVHSK 67
Query: 36 TPRYGNVS 13
TP + +S
Sbjct: 68 TPSFNPIS 75
>ref|XP_002980093.1| hypothetical protein SELMODRAFT_112009 [Selaginella moellendorffii]
gi|300152320|gb|EFJ18963.1| hypothetical protein
SELMODRAFT_112009 [Selaginella moellendorffii]
Length = 394
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/57 (52%), Positives = 44/57 (77%)
Frame = -1
Query: 207 QIVFSRIQDIDPENVSKIIGYFLVQDLREEQMRCLAFGSNSFLLNMVSKAKNDLGLY 37
Q+VF+R+Q DPENVSKIIG L+QD E++M LA GS++ L + ++KA+ +LGL+
Sbjct: 8 QLVFARVQAQDPENVSKIIGLMLLQDRSEQEMARLALGSDALLQSAIAKARRELGLF 64
>ref|XP_002992677.1| hypothetical protein SELMODRAFT_236569 [Selaginella moellendorffii]
gi|300139523|gb|EFJ06262.1| hypothetical protein
SELMODRAFT_236569 [Selaginella moellendorffii]
Length = 361
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/57 (52%), Positives = 44/57 (77%)
Frame = -1
Query: 207 QIVFSRIQDIDPENVSKIIGYFLVQDLREEQMRCLAFGSNSFLLNMVSKAKNDLGLY 37
Q+VF+R+Q DPENVSKIIG L+QD E++M LA GS++ L + ++KA+ +LGL+
Sbjct: 8 QLVFARVQAQDPENVSKIIGLMLLQDRSEQEMARLALGSDALLQSAIAKARRELGLF 64
>ref|XP_006365193.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X3 [Solanum tuberosum]
Length = 692
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/56 (53%), Positives = 43/56 (76%)
Frame = -1
Query: 207 QIVFSRIQDIDPENVSKIIGYFLVQDLREEQMRCLAFGSNSFLLNMVSKAKNDLGL 40
+IV SRIQ +DPEN SKI+GY L+QD E++M LAFG + L++++++AK LGL
Sbjct: 8 KIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLINQAKTCLGL 63
>ref|XP_006365192.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X2 [Solanum tuberosum]
Length = 695
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/56 (53%), Positives = 43/56 (76%)
Frame = -1
Query: 207 QIVFSRIQDIDPENVSKIIGYFLVQDLREEQMRCLAFGSNSFLLNMVSKAKNDLGL 40
+IV SRIQ +DPEN SKI+GY L+QD E++M LAFG + L++++++AK LGL
Sbjct: 8 KIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLINQAKTCLGL 63
>ref|XP_006365191.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X1 [Solanum tuberosum]
Length = 701
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/56 (53%), Positives = 43/56 (76%)
Frame = -1
Query: 207 QIVFSRIQDIDPENVSKIIGYFLVQDLREEQMRCLAFGSNSFLLNMVSKAKNDLGL 40
+IV SRIQ +DPEN SKI+GY L+QD E++M LAFG + L++++++AK LGL
Sbjct: 8 KIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLINQAKTCLGL 63
>ref|XP_004303082.1| PREDICTED: zinc finger CCCH domain-containing protein 22-like
[Fragaria vesca subsp. vesca]
Length = 719
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/56 (55%), Positives = 43/56 (76%)
Frame = -1
Query: 207 QIVFSRIQDIDPENVSKIIGYFLVQDLREEQMRCLAFGSNSFLLNMVSKAKNDLGL 40
+IVFSRI ++DPEN SKI+G L+QD E++M LAFG +FL +++ KA+ DLGL
Sbjct: 8 RIVFSRITNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEAFLHSVILKARKDLGL 63
>ref|XP_006368576.1| hypothetical protein POPTR_0001s05760g [Populus trichocarpa]
gi|550346592|gb|ERP65145.1| hypothetical protein
POPTR_0001s05760g [Populus trichocarpa]
Length = 707
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/59 (50%), Positives = 45/59 (76%)
Frame = -1
Query: 207 QIVFSRIQDIDPENVSKIIGYFLVQDLREEQMRCLAFGSNSFLLNMVSKAKNDLGLYTP 31
+IVFSRIQ++DPEN SKI+G L+QD E++M LAFG + + +++ KA+ +LGL +P
Sbjct: 8 RIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKELGLCSP 66
>ref|XP_006386017.1| hypothetical protein POPTR_0003s20310g [Populus trichocarpa]
gi|550343612|gb|ERP63814.1| hypothetical protein
POPTR_0003s20310g [Populus trichocarpa]
Length = 682
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/59 (50%), Positives = 45/59 (76%)
Frame = -1
Query: 207 QIVFSRIQDIDPENVSKIIGYFLVQDLREEQMRCLAFGSNSFLLNMVSKAKNDLGLYTP 31
+IVFSRIQ++DPEN SKI+G L+QD E++M LAFG + + +++ KA+ +LGL +P
Sbjct: 8 RIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKELGLSSP 66
>ref|XP_002303898.2| hypothetical protein POPTR_0003s20310g [Populus trichocarpa]
gi|550343611|gb|EEE78877.2| hypothetical protein
POPTR_0003s20310g [Populus trichocarpa]
Length = 705
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/59 (50%), Positives = 45/59 (76%)
Frame = -1
Query: 207 QIVFSRIQDIDPENVSKIIGYFLVQDLREEQMRCLAFGSNSFLLNMVSKAKNDLGLYTP 31
+IVFSRIQ++DPEN SKI+G L+QD E++M LAFG + + +++ KA+ +LGL +P
Sbjct: 8 RIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKELGLSSP 66
>ref|XP_006386016.1| hypothetical protein POPTR_0003s20310g [Populus trichocarpa]
gi|550343610|gb|ERP63813.1| hypothetical protein
POPTR_0003s20310g [Populus trichocarpa]
Length = 623
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/59 (50%), Positives = 45/59 (76%)
Frame = -1
Query: 207 QIVFSRIQDIDPENVSKIIGYFLVQDLREEQMRCLAFGSNSFLLNMVSKAKNDLGLYTP 31
+IVFSRIQ++DPEN SKI+G L+QD E++M LAFG + + +++ KA+ +LGL +P
Sbjct: 8 RIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKELGLSSP 66
>gb|EOY32749.1| Zinc finger family protein / RNA recognition motif-containing
protein, putative [Theobroma cacao]
Length = 699
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/55 (54%), Positives = 42/55 (76%)
Frame = -1
Query: 207 QIVFSRIQDIDPENVSKIIGYFLVQDLREEQMRCLAFGSNSFLLNMVSKAKNDLG 43
+IVFSRIQ++DPEN SKI+GY L+QD E++M LAFG + + +++ KAK LG
Sbjct: 8 RIVFSRIQNLDPENASKIMGYLLIQDHGEKEMIRLAFGPEALIHSLILKAKTHLG 62
>gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus persica]
Length = 565
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/58 (51%), Positives = 44/58 (75%)
Frame = -1
Query: 213 SRQIVFSRIQDIDPENVSKIIGYFLVQDLREEQMRCLAFGSNSFLLNMVSKAKNDLGL 40
S ++V++RIQ I+PENVSKIIGY L+QD E M LAF ++ + ++++KAK +LGL
Sbjct: 6 STKVVYNRIQKIEPENVSKIIGYLLLQDHGERDMIRLAFSPDNLIQSLINKAKTELGL 63
>ref|XP_002332416.1| predicted protein [Populus trichocarpa]
Length = 598
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/59 (50%), Positives = 45/59 (76%)
Frame = -1
Query: 207 QIVFSRIQDIDPENVSKIIGYFLVQDLREEQMRCLAFGSNSFLLNMVSKAKNDLGLYTP 31
+IVFSRIQ++DPEN SKI+G L+QD E++M LAFG + + +++ KA+ +LGL +P
Sbjct: 8 RIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKELGLCSP 66
>gb|AAR14273.1| predicted protein [Populus tremula x Populus alba]
Length = 705
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/59 (50%), Positives = 45/59 (76%)
Frame = -1
Query: 207 QIVFSRIQDIDPENVSKIIGYFLVQDLREEQMRCLAFGSNSFLLNMVSKAKNDLGLYTP 31
+IVFSRIQ++DPEN SKI+G L+QD E++M LAFG + + +++ KA+ +LGL +P
Sbjct: 8 RIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKELGLSSP 66