BLASTX nr result
ID: Ephedra27_contig00017295
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00017295
(602 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAY87440.1| hypothetical protein OsI_08849 [Oryza sativa Indi... 68 2e-09
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V... 65 2e-08
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu... 64 3e-08
gb|EEE57765.1| hypothetical protein OsJ_08301 [Oryza sativa Japo... 64 4e-08
ref|XP_006836643.1| hypothetical protein AMTR_s00088p00026960 [A... 62 9e-08
gb|EOY01384.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobro... 62 9e-08
gb|EMT03978.1| Putative RNA-dependent RNA polymerase 1 [Aegilops... 62 2e-07
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu... 62 2e-07
ref|XP_006477872.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 61 2e-07
gb|EOY20662.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobro... 61 2e-07
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 61 3e-07
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa... 61 3e-07
gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tu... 61 3e-07
gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tu... 61 3e-07
ref|XP_006647856.1| PREDICTED: probable RNA-dependent RNA polyme... 60 4e-07
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 60 4e-07
gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana... 60 4e-07
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum] 60 4e-07
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper... 60 4e-07
gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare su... 60 5e-07
>gb|EAY87440.1| hypothetical protein OsI_08849 [Oryza sativa Indica Group]
Length = 1067
Score = 67.8 bits (164), Expect = 2e-09
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Frame = -3
Query: 384 TLHMCCPIAEYTFCVLHSTTEVLVDLETNSRKICMYLQ--DNSVEYKLELSYTDIRYVIG 211
TLH C + E L S T V V+ N +KI YLQ ++S+EYKLELSY I +
Sbjct: 105 TLHFGCLLKETILSALWSRTGVSVEFGFNLKKIYFYLQLPNSSIEYKLELSYESIWEIQL 164
Query: 210 DQLKDSENKIALLRLRHAPRVYYRIYGYTNSKLKQRRENVY------EWVRTTDYTGSGS 49
+ S+ K L++++ AP++Y + + + N + +W RTTD+T S S
Sbjct: 165 QRPPKSQTKFLLIQVQAAPKIYEQTPRRSGVMYEDPLFNYFRDHTDDQWTRTTDFTSSSS 224
Query: 48 IAKSSFFGWEISK 10
I +S E+ +
Sbjct: 225 IGQSYILCLEVPR 237
>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 64.7 bits (156), Expect = 2e-08
Identities = 41/125 (32%), Positives = 63/125 (50%)
Frame = -3
Query: 411 AELKNMLKCTLHMCCPIAEYTFCVLHSTTEVLVDLETNSRKICMYLQDNSVEYKLELSYT 232
A L +M + TLH C +++ FCVL V V + RK +L S EYKLELSY
Sbjct: 92 AFLHSMDRITLHFGCQMSDERFCVLWKAINVSVKFGSGLRKFYFFLSHGSEEYKLELSYE 151
Query: 231 DIRYVIGDQLKDSENKIALLRLRHAPRVYYRIYGYTNSKLKQRRENVYEWVRTTDYTGSG 52
+I + + K L++L AP++Y + + K+ ++ +WVR D+T S
Sbjct: 152 NIWQIQLQHPRGQITKFLLIQLLGAPQIYEKDVPVLSYYFKEAPDD--QWVREIDFTPSC 209
Query: 51 SIAKS 37
I +S
Sbjct: 210 FIGQS 214
>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 1115
Score = 63.9 bits (154), Expect = 3e-08
Identities = 42/119 (35%), Positives = 64/119 (53%)
Frame = -3
Query: 411 AELKNMLKCTLHMCCPIAEYTFCVLHSTTEVLVDLETNSRKICMYLQDNSVEYKLELSYT 232
A + +M TL+ C I+E F VL ST EV + +K +L S +YKL+LSY
Sbjct: 90 AYVDHMDGITLNFGCQISEDKFAVLGST-EVSIKFGIGLKKFFFFLSSGSADYKLQLSYE 148
Query: 231 DIRYVIGDQLKDSENKIALLRLRHAPRVYYRIYGYTNSKLKQRRENVYEWVRTTDYTGS 55
+I V+ + + L++L APR+Y R+ S K+ ++ +WVRTTD+T S
Sbjct: 149 NIWQVVLHRPYGQNAQFLLIQLFGAPRIYKRLENSCYSFFKETPDD--QWVRTTDFTPS 205
>gb|EEE57765.1| hypothetical protein OsJ_08301 [Oryza sativa Japonica Group]
Length = 1027
Score = 63.5 bits (153), Expect = 4e-08
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Frame = -3
Query: 384 TLHMCCPIAEYTFCVLHSTTEVLVDLETNSRKICMYLQ--DNSVEYKLELSYTDIRYVIG 211
TLH C + E L S V V+ N +KI YLQ ++S+EYKLELS+ I +
Sbjct: 105 TLHFGCLLKETILSALWSRKGVSVEFGFNLKKIYFYLQLPNSSIEYKLELSHESIWEIQL 164
Query: 210 DQLKDSENKIALLRLRHAPRVYYRIYGYTNSKLKQRRENVY------EWVRTTDYTGSGS 49
+ S+ K L++++ AP++Y + + + N + +W RTTD+T S S
Sbjct: 165 QRPPKSQTKFLLIQVQAAPKIYEQTPRRSGVMYEDPLFNYFRDHTDDQWTRTTDFTSSSS 224
Query: 48 IAKSSFFGWEISK 10
I +S E+ +
Sbjct: 225 IGQSYILCLEVPR 237
>ref|XP_006836643.1| hypothetical protein AMTR_s00088p00026960 [Amborella trichopoda]
gi|548839203|gb|ERM99496.1| hypothetical protein
AMTR_s00088p00026960 [Amborella trichopoda]
Length = 1107
Score = 62.4 bits (150), Expect = 9e-08
Identities = 35/126 (27%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Frame = -3
Query: 381 LHMCCPIAEYTFCVLHSTTEVLVDLETNSRKICMYLQDNSVEYKLELSYTDIRYVIGDQL 202
L + C + E + V+ S V +L +++ Y+ + +KLE + DI G Q+
Sbjct: 105 LKVGCLVYEDSMSVIGSWNLVKAELMPERKRVDFYVSERGELFKLETRFEDIVETFGCQI 164
Query: 201 KDSENKIALLRLRHAPRVYYRIYGYTNSKLKQRRENV------YEWVRTTDYTGSGSIAK 40
+ LL++++APR+Y ++ ++SK + R ++ ++WVRTTD++ S +I +
Sbjct: 165 GGTNFDAILLQIKYAPRIYCKV--PSSSKCGRDRYHICKEEYEFDWVRTTDFSASRTIGQ 222
Query: 39 SSFFGW 22
S++F W
Sbjct: 223 STYFCW 228
>gb|EOY01384.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao]
gi|508709489|gb|EOY01386.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao]
Length = 1109
Score = 62.4 bits (150), Expect = 9e-08
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Frame = -3
Query: 405 LKNMLKCTLHMCCPIAEYTFCVLHSTTEVLVDLETNSRKICMYLQDNSVEYKLELSYTDI 226
L M TLH C ++ F VL +V V+ RK+ L + VEY+L+L Y +I
Sbjct: 93 LHTMEGVTLHFGCQVSNEKFYVLWEEVDVTVNFGMGMRKLQFLLSHHCVEYRLDLFYENI 152
Query: 225 RYVIGDQLKDSENKIALLRLRHAPRVYYRIYGYTNSKLKQRRENVY------EWVRTTDY 64
+ + ++ +K L++L APR+Y + + + N + +WVRTTD+
Sbjct: 153 WQIELHRPRNQTSKYLLIQLFGAPRIYEKDVRSSGLVFENPLLNYFMDVPDDQWVRTTDF 212
Query: 63 TGSGSIAKSSFFGWEI 16
T S I +SS E+
Sbjct: 213 TQSSCIGQSSVLCLEL 228
>gb|EMT03978.1| Putative RNA-dependent RNA polymerase 1 [Aegilops tauschii]
Length = 1056
Score = 61.6 bits (148), Expect = 2e-07
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Frame = -3
Query: 492 PQNIQASKSS--LIPYSGEK--GLLCRADNGAELKNMLKCTLHMCCPIAEYTFCVLHSTT 325
P+N A+ S ++ + E L+ A G L++ C + P + VL S T
Sbjct: 41 PKNSSANSRSFAIVQFETEAHASLVVNAARGNALRSGRGCNIAFWLPSEGQSLSVLWSGT 100
Query: 324 EVLVDLETNSRKICMYLQDNSVEYKLELSYTDIRYVIGDQLKDSENKIALLRLRHAPRVY 145
V ++ +KI L NS +YKLELSY I + Q S+ K L+++ AP++Y
Sbjct: 101 GVSIEFGFAMKKIDFCLTYNSKKYKLELSYESIWEIQIHQPPGSQKKFLLIQVMAAPKIY 160
Query: 144 YRIYGYTNSKLKQRRENVY------EWVRTTDYTGSGSIAKSSFFGWEI 16
+ ++ S N + +W RTTD+T SI +S EI
Sbjct: 161 EQNLRHSGSMYDDPSYNYFRDDTEDQWTRTTDFTPLASIGQSYILCLEI 209
>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 1065
Score = 61.6 bits (148), Expect = 2e-07
Identities = 41/119 (34%), Positives = 64/119 (53%)
Frame = -3
Query: 411 AELKNMLKCTLHMCCPIAEYTFCVLHSTTEVLVDLETNSRKICMYLQDNSVEYKLELSYT 232
A + +M TL+ C I++ F VL ST EV + +KI +L S +YKL+LSY
Sbjct: 89 AYVDHMDGITLNFGCQISDDKFAVLGST-EVSIKFGIGLKKIYFFLSRGSADYKLQLSYE 147
Query: 231 DIRYVIGDQLKDSENKIALLRLRHAPRVYYRIYGYTNSKLKQRRENVYEWVRTTDYTGS 55
+I V+ + + L++L APR+Y R+ S K+ ++ +WVRTTD+ S
Sbjct: 148 NIWQVVLHRPYGQNAQFLLIQLFGAPRIYKRLENSCYSFFKETPDD--QWVRTTDFAPS 204
>ref|XP_006477872.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1082
Score = 61.2 bits (147), Expect = 2e-07
Identities = 40/124 (32%), Positives = 60/124 (48%)
Frame = -3
Query: 381 LHMCCPIAEYTFCVLHSTTEVLVDLETNSRKICMYLQDNSVEYKLELSYTDIRYVIGDQL 202
L+ C I+E F VL S V V L ++ RK +L SV+YKLELSY I ++ +
Sbjct: 96 LNFGCQISEDKFSVLWSQENVSVKLCSDLRKFVFFLSCASVDYKLELSYESIWQIVLHRS 155
Query: 201 KDSENKIALLRLRHAPRVYYRIYGYTNSKLKQRRENVYEWVRTTDYTGSGSIAKSSFFGW 22
+K +++L AP++Y E W+R D+T S SI +SS
Sbjct: 156 SRHSDKYLVIQLHGAPKIY---------------EKDVHWIREVDFTPSSSIGQSSAMCL 200
Query: 21 EISK 10
E+ +
Sbjct: 201 ELPR 204
>gb|EOY20662.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
gi|508773407|gb|EOY20663.1| RNA-dependent RNA polymerase
2 isoform 1 [Theobroma cacao]
Length = 1149
Score = 61.2 bits (147), Expect = 2e-07
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Frame = -3
Query: 381 LHMCCPIAEYTFCVLHSTTEVLVDLETNSRKICMYLQDNSVEYKLELSYTDIRYVIGDQL 202
LH+ + + VL +V L R++ +L +N YKLE+ + D+ +G
Sbjct: 115 LHVGFMVQDDYLRVLERWEDVRGWLMPERRRLEFWLWNNGECYKLEVLFDDVLETVGCCF 174
Query: 201 KDSENKIALLRLRHAPRVYYRIYG-YTNSKLKQRRENV------YEWVRTTDYTGSGSIA 43
S LLR+++APR+Y ++ G SKL+ R ++ + WVRTTD++ + ++
Sbjct: 175 NGSSCNALLLRVKYAPRIYQKVSGPNIASKLRPDRYHICKENFDFLWVRTTDFSRTKAVG 234
Query: 42 KSSFFGWEIS 13
+S+ F WEI+
Sbjct: 235 QSTAFYWEIN 244
>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
Length = 1115
Score = 60.8 bits (146), Expect = 3e-07
Identities = 40/119 (33%), Positives = 63/119 (52%)
Frame = -3
Query: 411 AELKNMLKCTLHMCCPIAEYTFCVLHSTTEVLVDLETNSRKICMYLQDNSVEYKLELSYT 232
A + +M TL+ C I++ F VL ST EV + +K +L S +YKL+LSY
Sbjct: 90 AYVDHMDGITLNFGCQISDDKFAVLGST-EVSIKFGIGLKKFFFFLSSGSADYKLQLSYE 148
Query: 231 DIRYVIGDQLKDSENKIALLRLRHAPRVYYRIYGYTNSKLKQRRENVYEWVRTTDYTGS 55
+I V+ + + L++L APR+Y R+ S K+ ++ +WVRTTD+ S
Sbjct: 149 NIWQVVLHRPYGQNAQFLLIQLFGAPRIYKRLENSCYSFFKETPDD--QWVRTTDFAPS 205
>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
[Nicotiana glutinosa]
Length = 1117
Score = 60.8 bits (146), Expect = 3e-07
Identities = 40/117 (34%), Positives = 64/117 (54%)
Frame = -3
Query: 405 LKNMLKCTLHMCCPIAEYTFCVLHSTTEVLVDLETNSRKICMYLQDNSVEYKLELSYTDI 226
+++M TL+ C I++ F VL S V + +KI +L S +YKL+LSY +I
Sbjct: 92 VQHMDGVTLNFGCQISDKKFAVLGSKV-VSIKFGIGLKKIYFFLSYGSTDYKLQLSYENI 150
Query: 225 RYVIGDQLKDSENKIALLRLRHAPRVYYRIYGYTNSKLKQRRENVYEWVRTTDYTGS 55
V+ + + + LL+L APR+Y R+ S K+ ++ +WVRTTD+T S
Sbjct: 151 WQVVLHRPYGQKAQFLLLQLSGAPRIYKRLEDSCYSFFKETPDD--QWVRTTDFTPS 205
>gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 841
Score = 60.8 bits (146), Expect = 3e-07
Identities = 40/119 (33%), Positives = 63/119 (52%)
Frame = -3
Query: 411 AELKNMLKCTLHMCCPIAEYTFCVLHSTTEVLVDLETNSRKICMYLQDNSVEYKLELSYT 232
A + +M TL+ C I++ F VL ST EV + +K +L S +YKL+LSY
Sbjct: 90 AYVDHMDGITLNFGCQISDDKFAVLGST-EVSIKFGIGLKKFFFFLSSGSADYKLQLSYE 148
Query: 231 DIRYVIGDQLKDSENKIALLRLRHAPRVYYRIYGYTNSKLKQRRENVYEWVRTTDYTGS 55
+I V+ + + L++L APR+Y R+ S K+ ++ +WVRTTD+ S
Sbjct: 149 NIWQVVLHRPYGQNAQFLLIQLFGAPRIYKRLENSCYSFFKETPDD--QWVRTTDFAPS 205
>gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 935
Score = 60.8 bits (146), Expect = 3e-07
Identities = 40/119 (33%), Positives = 63/119 (52%)
Frame = -3
Query: 411 AELKNMLKCTLHMCCPIAEYTFCVLHSTTEVLVDLETNSRKICMYLQDNSVEYKLELSYT 232
A + +M TL+ C I++ F VL ST EV + + +L S +YKL+LSY
Sbjct: 90 AYVDHMDGITLNFGCQISDDKFAVLGST-EVSIKFGIGLKNFFFFLSSGSADYKLQLSYE 148
Query: 231 DIRYVIGDQLKDSENKIALLRLRHAPRVYYRIYGYTNSKLKQRRENVYEWVRTTDYTGS 55
+I V+ + + L++L APR+Y R+ S K+ ++ +WVRTTD+T S
Sbjct: 149 NIWQVVLHRPYGQNAQFLLIQLFGAPRIYKRLENSCYSFFKETPDD--QWVRTTDFTPS 205
>ref|XP_006647856.1| PREDICTED: probable RNA-dependent RNA polymerase 1-like [Oryza
brachyantha]
Length = 1113
Score = 60.5 bits (145), Expect = 4e-07
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Frame = -3
Query: 384 TLHMCCPIAEYTFCVLHSTTEVLVDLETNSRKICMYLQ--DNSVEYKLELSYTDIRYVIG 211
TLH+ C + E L S T+V V+ N +KI +LQ S E+KLELSY I +
Sbjct: 105 TLHIGCLLRERVLSALWSRTKVSVEFGFNLKKIYFHLQLPSGSTEFKLELSYESIWEIEL 164
Query: 210 DQLKDSENKIALLRLRHAPRVYYRIYGYTNSKLKQRRENVY------EWVRTTDYTGSGS 49
+ S+ K L+++ AP++Y + + N + +W RTTD+T S
Sbjct: 165 HRPPRSQTKFLLIQVEAAPKIYEPTPRRSGVMFEDPSFNYFRDSTDDQWTRTTDFTASSC 224
Query: 48 IAKSSFFGWEI 16
I +S E+
Sbjct: 225 IGQSYILCLEV 235
>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
tuberosum]
Length = 1115
Score = 60.5 bits (145), Expect = 4e-07
Identities = 38/110 (34%), Positives = 59/110 (53%)
Frame = -3
Query: 384 TLHMCCPIAEYTFCVLHSTTEVLVDLETNSRKICMYLQDNSVEYKLELSYTDIRYVIGDQ 205
TL+ C I++ F VL ST EV + +K +L S +YKL+LSY +I V+ +
Sbjct: 99 TLNFGCQISDDKFAVLGST-EVSIKFGIGLKKFFFFLSSGSADYKLQLSYENIWQVVLHR 157
Query: 204 LKDSENKIALLRLRHAPRVYYRIYGYTNSKLKQRRENVYEWVRTTDYTGS 55
+ L++L APR+Y R+ S K+ ++ +WVRTTD+ S
Sbjct: 158 PYGQNAQFLLIQLFGAPRIYKRLENSCYSFFKETPDD--QWVRTTDFAPS 205
>gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana attenuata]
Length = 1044
Score = 60.5 bits (145), Expect = 4e-07
Identities = 40/117 (34%), Positives = 65/117 (55%)
Frame = -3
Query: 405 LKNMLKCTLHMCCPIAEYTFCVLHSTTEVLVDLETNSRKICMYLQDNSVEYKLELSYTDI 226
+++M TL+ C I++ F VL S +V + +KI +L S +YKL+LSY +I
Sbjct: 92 VQHMDGVTLNFGCQISDKKFAVLGSK-DVSIKFGIGLKKIYFFLSYGSTDYKLQLSYENI 150
Query: 225 RYVIGDQLKDSENKIALLRLRHAPRVYYRIYGYTNSKLKQRRENVYEWVRTTDYTGS 55
V+ + + LL+L APR++ R+ NS K+ ++ +WVRTTD+T S
Sbjct: 151 WQVVLHCPYGQKAQFLLLQLFGAPRIHKRLEDSCNSFFKETPDD--QWVRTTDFTPS 205
>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
Length = 1116
Score = 60.5 bits (145), Expect = 4e-07
Identities = 40/117 (34%), Positives = 64/117 (54%)
Frame = -3
Query: 405 LKNMLKCTLHMCCPIAEYTFCVLHSTTEVLVDLETNSRKICMYLQDNSVEYKLELSYTDI 226
+++M TL+ C I++ F VL S +V + +KI +L S +YKL+LSY +I
Sbjct: 92 VEHMDGVTLNFGCQISDKKFAVLGSK-DVSIKFGIGLKKIYFFLSHASADYKLQLSYENI 150
Query: 225 RYVIGDQLKDSENKIALLRLRHAPRVYYRIYGYTNSKLKQRRENVYEWVRTTDYTGS 55
V+ + + LL+L APR+Y R+ S K+ ++ +WVRTTD+T S
Sbjct: 151 WQVVLHRPYGQNAQFLLLQLFGAPRIYKRLEDSCYSFFKETPDD--QWVRTTDFTPS 205
>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
[Solanum lycopersicum]
Length = 1114
Score = 60.5 bits (145), Expect = 4e-07
Identities = 38/110 (34%), Positives = 59/110 (53%)
Frame = -3
Query: 384 TLHMCCPIAEYTFCVLHSTTEVLVDLETNSRKICMYLQDNSVEYKLELSYTDIRYVIGDQ 205
TL+ C I++ F VL ST EV + +K +L S +YKL+LSY +I V+ +
Sbjct: 99 TLNFGCQISDDKFAVLGST-EVSIQFGIGLKKFFFFLSSGSADYKLQLSYENIWQVVLHR 157
Query: 204 LKDSENKIALLRLRHAPRVYYRIYGYTNSKLKQRRENVYEWVRTTDYTGS 55
+ L++L APR+Y R+ S K+ ++ +WVRTTD+ S
Sbjct: 158 PYGQNAQFLLIQLFGAPRIYKRLENSCYSFFKETPDD--QWVRTTDFPPS 205
>gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare subsp. vulgare]
Length = 1115
Score = 60.1 bits (144), Expect = 5e-07
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Frame = -3
Query: 399 NMLKCTLHMCCPIAEYTFCVLHSTTEVLVDLETNSRKICMYLQDNSVEYKLELSYTDIRY 220
N+ LH C + E VL S T+V V+ ++I L NS +YKLELSY I
Sbjct: 100 NLQGAKLHFGCLLKERVLSVLWSGTDVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWE 159
Query: 219 VIGDQLKDSENKIALLRLRHAPRVYYRIYGYTNSKLKQRRENVY------EWVRTTDYTG 58
+ + + K L++++ AP++Y + + S N + +W RTTD+T
Sbjct: 160 IQLHRPPGLQKKFLLIQVQAAPKIYEQNIRLSGSMYDDPLFNYFRDDTDDQWTRTTDFTP 219
Query: 57 SGSIAKSSFFGWEI 16
S SI +S E+
Sbjct: 220 SASIGQSYILSLEL 233