BLASTX nr result

ID: Ephedra27_contig00017286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00017286
         (533 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001760673.1| predicted protein [Physcomitrella patens] gi...    57   2e-06

>ref|XP_001760673.1| predicted protein [Physcomitrella patens] gi|162688033|gb|EDQ74412.1|
            predicted protein [Physcomitrella patens]
          Length = 728

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 46/179 (25%), Positives = 62/179 (34%), Gaps = 2/179 (1%)
 Frame = +1

Query: 1    QFGHADPGYASSVWEALLVPLGFSGLVGVSWITRWYVAKKYNVGELLRWPVVFPFPGLGA 180
            QF  AD G      +  +V LG   ++   W+ R  VA  Y V  ++R P   P P  GA
Sbjct: 464  QFDPADVGIDQVYLQGWIVALGLFAVIAGGWLARKAVATLYKVSHMVRLPFSLPVPHQGA 523

Query: 181  IGCVTSYKGCLPNR-DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFYGFFLV 357
             G    YKGCLP+R                                       F G  LV
Sbjct: 524  FGTAVYYKGCLPDRTSLLDLSLSSAFASLAISGALMGASYTSWASSNSSGVVGFDGLLLV 583

Query: 358  PXXXXXXXXXXXXXXXXXXXATFLDE-SRGLEYVVSPVELCGLIGLCFSCFNLVPLKRF 531
            P                   AT   E    L  V++P+ L G++GL  +   L+P+  F
Sbjct: 584  PEHLFSYSQLFSWLIHNLSVATISGEFGEDLNLVLNPLALAGVLGLHSTALGLLPVGIF 642


Top