BLASTX nr result

ID: Ephedra27_contig00017206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00017206
         (531 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24844.1| unknown [Picea sitchensis]                              75   9e-12
gb|ABK23690.1| unknown [Picea sitchensis]                              75   9e-12
gb|ABK26475.1| unknown [Picea sitchensis]                              73   5e-11

>gb|ABK24844.1| unknown [Picea sitchensis]
          Length = 236

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
 Frame = +2

Query: 5   HRCDACGDVLGGFCYKGKEK--RKSVMLHPLCMTLPQRFHYTRHEAHDVELERCPPELRK 178
           HRC+AC DV+ G+ ++ +    R  + LHPLCM LP+   Y+ H  H ++L R   +L+ 
Sbjct: 102 HRCNACWDVVRGYVFETERHHLRHELRLHPLCMALPKILDYSGHANHKLKLVR--GDLKG 159

Query: 179 DRQKCARCDDIC--VGWLYVCTEVSCSMKGLCVQCAKLDILGLYRHNV 316
               C+ CD      GW Y C E++C +  + + CAK+DI GL  H +
Sbjct: 160 KEYACSACDTQIDYGGWRYRCEEMACKVY-VDLSCAKIDIFGLSDHGI 206


>gb|ABK23690.1| unknown [Picea sitchensis]
          Length = 242

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
 Frame = +2

Query: 5   HRCDACGDVLGGFCYKGKEK--RKSVMLHPLCMTLPQRFHYTRHEAHDVELERCPPELRK 178
           HRC+AC D + G+ ++ + +  R  + LHPLCM LP+   Y+RH  H  +L+    +L+ 
Sbjct: 106 HRCNACWDEVKGYVFETERRHLRPELRLHPLCMALPKILDYSRHADH--KLKFVTGDLKG 163

Query: 179 DRQKCARCDDICV--GWLYVCTEVSCSMKGLCVQCAKLDILGLYRHNV 316
               C+ CD      GW Y C EV+C +  + + CAK+DI GL  H +
Sbjct: 164 KAYNCSVCDSQIESGGWRYRCEEVACKVY-VDLSCAKIDIFGLSDHGI 210


>gb|ABK26475.1| unknown [Picea sitchensis]
          Length = 244

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
 Frame = +2

Query: 5   HRCDACGDVLGGFCYKGKEK--RKSVMLHPLCMTLPQRFHYTRHEAHDVELERCPPELRK 178
           HRC+AC DV+ G+ ++ + +  R  + LHPLCM LP+   Y+ H  H  +L+    +L+ 
Sbjct: 106 HRCNACCDVVKGYVFQTERRHLRTELRLHPLCMALPKILDYSGHANH--KLKFVTGDLKG 163

Query: 179 DRQKCARCDD--ICVGWLYVCTEVSCSMKGLCVQCAKLDILGLYRHNV 316
               C+ CD      GW Y C +V+C +  + + CAK+DI GL  H +
Sbjct: 164 KGYACSACDSQIDSGGWRYRCEDVACKVY-VDLSCAKIDIFGLSDHGI 210


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