BLASTX nr result

ID: Ephedra27_contig00017080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00017080
         (893 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_021918374.1| chromosome partition protein Smc [Brachyspir...    62   4e-07
gb|ESO81955.1| hypothetical protein LOTGIDRAFT_170493 [Lottia gi...    59   3e-06
gb|EKC42999.1| Kinesin-like protein KIF20A [Crassostrea gigas]         58   4e-06

>ref|WP_021918374.1| chromosome partition protein Smc [Brachyspira sp. CAG:484]
           gi|524857101|emb|CCY25334.1| chromosome partition
           protein Smc [Brachyspira sp. CAG:484]
          Length = 1163

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 59/239 (24%), Positives = 102/239 (42%), Gaps = 13/239 (5%)
 Frame = -2

Query: 853 EKVEENIITFSKEASHCKEDKKSEESVCAETENVKSE-QDAGNKGIENTEADHLEKKGEE 677
           EK  ENI+ F+K+    KE++   + +      +KS+ Q+  N   E  EA  LE K +E
Sbjct: 236 EKAHENILEFTKKK---KEEELKNKDLDERLNLIKSKYQEISNLVKEKGEAKQLELKKQE 292

Query: 676 TRSEGDA---KNVEVSTDKDNIDCESNTQGLAGDFITESKPSENPEHNSSCNPDENDMKI 506
              +G     +N     DK  +D     +          K  E+   N     +EN  +I
Sbjct: 293 EELKGSIDRKQNALNFADKQILDGLKTIENAKNGIENFKKKIEDIRLNIKLK-EENIKRI 351

Query: 505 ESMITSEKTEDNQAIDNAIDKADISHALVEENAMLRKEVQMLKDELASISFQMFDLEARC 326
           +  I ++K E  + +++       +   +E    LRKE++ L+D+  S+  Q   LE+  
Sbjct: 352 DENIDTKKAELKKILEDMTGLNSTAEQHIENRNRLRKELEELQDKATSLLQQKLPLESEL 411

Query: 325 INLESTNSELSYTLRGYSELGT---------KEEIISCSEQISQFEDFLRRMVNEFSVT 176
            NL+S+ SE    L    EL +         K+ +    ++I  F+   +  +NE   T
Sbjct: 412 KNLQSSLSEAKAKLAELEELKSNFASNFDLKKQLVEQLGKEIEDFKSIQQNTMNELDKT 470


>gb|ESO81955.1| hypothetical protein LOTGIDRAFT_170493 [Lottia gigantea]
          Length = 260

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 44/177 (24%), Positives = 93/177 (52%), Gaps = 8/177 (4%)
 Frame = -2

Query: 892 NHQEIDML-NQEEAEKVE--ENIITFSKEASHCKEDKKSEESVCAETENVKSEQDAGN-- 728
           N + ++++ N+E  E VE  EN+     E +  +E+ ++EE+     ENV++E++  N  
Sbjct: 72  NEENVEIVENEENVENVENVENVENVENEEN--EENVENEEN----EENVENEENVENVE 125

Query: 727 --KGIENTEADHLEKKGEETRSEGDAKNVEVSTDKDNIDCESNTQGLAGDFITESKPS-E 557
             + +EN E    E+  E   +E + +NVE   +++N++ E N + +  +   E++ + E
Sbjct: 126 NEENVENEENVENEENEENVENEENVENVENEENEENVENEENEENVQNEENVENEENEE 185

Query: 556 NPEHNSSCNPDENDMKIESMITSEKTEDNQAIDNAIDKADISHALVEENAMLRKEVQ 386
           N E+  +    EN+   E++   E  E+ + ++N  +K ++ +   EEN    + V+
Sbjct: 186 NVENEENEENVENEENEENVENEENEENVENVENEKNKENVENEENEENEENEENVE 242


>gb|EKC42999.1| Kinesin-like protein KIF20A [Crassostrea gigas]
          Length = 2167

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 59/242 (24%), Positives = 115/242 (47%), Gaps = 15/242 (6%)
 Frame = -2

Query: 853  EKVEENIITFSKEASHCKEDKKSEESVCAETENVKSE-----QDAGNKGIENTEADH--- 698
            E++E  + + SKE    +++ K  ES C E E+   E     ++AG K +E    D+   
Sbjct: 771  EELETRLTSQSKENEKAQQNIKEMESRCVELESQVQELNTAKEEAGEK-VEKMLEDNRKY 829

Query: 697  --LEKKGEETRSEGDAKNVEVSTDKDNIDCESNTQGLAGDFITESKPSENPEHNSSCNPD 524
              LE+  E+ + + + K+VE+S  K+  +  + + G    F  +    E  +  S  +  
Sbjct: 830  LSLEETVEDLKFKMNEKDVEISELKEQANKLNMSMGKDLQFQLDEANIEISQLQSERSKL 889

Query: 523  ENDMKIESMITSEKTEDNQAIDNAIDKADISHALVEENAMLRKEVQMLKDELASISFQMF 344
            E        +  EKT+ N  +++ ++K  ++  ++EE+   + E +   ++L  IS +  
Sbjct: 890  ERKAVNLEKLYKEKTKQNMELNDELNKVKVAKEMLEEDLQDQDENE---EKLTEISKENE 946

Query: 343  DLEARCINLESTNSELSYTL-----RGYSELGTKEEIISCSEQISQFEDFLRRMVNEFSV 179
            +L+ R   LE+   +    L     +G +EL  K++II   EQIS+ E+    + +E  +
Sbjct: 947  ELKERIQKLEAQADQQQEKLGEAIQQGNAEL--KQKIIDLQEQISREENVNSALKSELEI 1004

Query: 178  TT 173
             T
Sbjct: 1005 AT 1006