BLASTX nr result
ID: Ephedra27_contig00016975
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra27_contig00016975 (440 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EXB55730.1| DNA-directed RNA polymerase II subunit [Morus not... 64 3e-08 gb|EOY06688.1| RNA polymerases M/15 Kd subunit [Theobroma cacao] 64 3e-08 ref|XP_004487774.1| PREDICTED: DNA-directed RNA polymerase II su... 64 3e-08 ref|XP_004239877.1| PREDICTED: DNA-directed RNA polymerase II su... 64 3e-08 ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II su... 64 3e-08 ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 ... 64 3e-08 ref|XP_003546327.1| PREDICTED: DNA-directed RNA polymerases II, ... 64 3e-08 ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycin... 64 3e-08 ref|XP_002312337.1| DNA-directed RNA polymerase II family protei... 62 6e-08 ref|XP_006406782.1| hypothetical protein EUTSA_v10021989mg [Eutr... 62 8e-08 ref|XP_006299525.1| hypothetical protein CARUB_v10015697mg [Caps... 62 8e-08 ref|XP_002883036.1| hypothetical protein ARALYDRAFT_318462 [Arab... 62 8e-08 ref|NP_188323.1| DNA-directed RNA polymerases II, IV and V subun... 62 8e-08 ref|XP_004981893.1| PREDICTED: DNA-directed RNA polymerase II su... 62 1e-07 gb|EMJ24706.1| hypothetical protein PRUPE_ppa013594mg [Prunus pe... 62 1e-07 gb|ESW10991.1| hypothetical protein PHAVU_009G256100g [Phaseolus... 61 1e-07 ref|XP_004295094.1| PREDICTED: DNA-directed RNA polymerase II su... 61 1e-07 ref|XP_002962042.1| hypothetical protein SELMODRAFT_77443 [Selag... 61 1e-07 ref|XP_001782379.1| predicted protein [Physcomitrella patens] gi... 61 1e-07 ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II su... 61 1e-07 >gb|EXB55730.1| DNA-directed RNA polymerase II subunit [Morus notabilis] Length = 192 Score = 63.5 bits (153), Expect = 3e-08 Identities = 25/25 (100%), Positives = 25/25 (100%) Frame = -3 Query: 438 TARGEEGMTLFFVCCNPNCGHRWRD 364 TARGEEGMTLFFVCCNPNCGHRWRD Sbjct: 168 TARGEEGMTLFFVCCNPNCGHRWRD 192 >gb|EOY06688.1| RNA polymerases M/15 Kd subunit [Theobroma cacao] Length = 114 Score = 63.5 bits (153), Expect = 3e-08 Identities = 25/25 (100%), Positives = 25/25 (100%) Frame = -3 Query: 438 TARGEEGMTLFFVCCNPNCGHRWRD 364 TARGEEGMTLFFVCCNPNCGHRWRD Sbjct: 90 TARGEEGMTLFFVCCNPNCGHRWRD 114 >ref|XP_004487774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like [Cicer arietinum] Length = 114 Score = 63.5 bits (153), Expect = 3e-08 Identities = 25/25 (100%), Positives = 25/25 (100%) Frame = -3 Query: 438 TARGEEGMTLFFVCCNPNCGHRWRD 364 TARGEEGMTLFFVCCNPNCGHRWRD Sbjct: 90 TARGEEGMTLFFVCCNPNCGHRWRD 114 >ref|XP_004239877.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like [Solanum lycopersicum] gi|565378585|ref|XP_006355736.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 9A-like [Solanum tuberosum] Length = 114 Score = 63.5 bits (153), Expect = 3e-08 Identities = 25/25 (100%), Positives = 25/25 (100%) Frame = -3 Query: 438 TARGEEGMTLFFVCCNPNCGHRWRD 364 TARGEEGMTLFFVCCNPNCGHRWRD Sbjct: 90 TARGEEGMTLFFVCCNPNCGHRWRD 114 >ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like [Cucumis sativus] gi|449517969|ref|XP_004166016.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like [Cucumis sativus] Length = 114 Score = 63.5 bits (153), Expect = 3e-08 Identities = 25/25 (100%), Positives = 25/25 (100%) Frame = -3 Query: 438 TARGEEGMTLFFVCCNPNCGHRWRD 364 TARGEEGMTLFFVCCNPNCGHRWRD Sbjct: 90 TARGEEGMTLFFVCCNPNCGHRWRD 114 >ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 [Medicago truncatula] gi|87240462|gb|ABD32320.1| DNA-directed RNA polymerase, subunit C11/M/9 [Medicago truncatula] gi|217075262|gb|ACJ85991.1| unknown [Medicago truncatula] gi|355483825|gb|AES65028.1| DNA-directed RNA polymerase II subunit RPB9 [Medicago truncatula] gi|388497558|gb|AFK36845.1| unknown [Medicago truncatula] Length = 114 Score = 63.5 bits (153), Expect = 3e-08 Identities = 25/25 (100%), Positives = 25/25 (100%) Frame = -3 Query: 438 TARGEEGMTLFFVCCNPNCGHRWRD 364 TARGEEGMTLFFVCCNPNCGHRWRD Sbjct: 90 TARGEEGMTLFFVCCNPNCGHRWRD 114 >ref|XP_003546327.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 9A-like [Glycine max] Length = 114 Score = 63.5 bits (153), Expect = 3e-08 Identities = 25/25 (100%), Positives = 25/25 (100%) Frame = -3 Query: 438 TARGEEGMTLFFVCCNPNCGHRWRD 364 TARGEEGMTLFFVCCNPNCGHRWRD Sbjct: 90 TARGEEGMTLFFVCCNPNCGHRWRD 114 >ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycine max] gi|255627167|gb|ACU13928.1| unknown [Glycine max] Length = 114 Score = 63.5 bits (153), Expect = 3e-08 Identities = 25/25 (100%), Positives = 25/25 (100%) Frame = -3 Query: 438 TARGEEGMTLFFVCCNPNCGHRWRD 364 TARGEEGMTLFFVCCNPNCGHRWRD Sbjct: 90 TARGEEGMTLFFVCCNPNCGHRWRD 114 >ref|XP_002312337.1| DNA-directed RNA polymerase II family protein [Populus trichocarpa] gi|222852157|gb|EEE89704.1| DNA-directed RNA polymerase II family protein [Populus trichocarpa] Length = 114 Score = 62.4 bits (150), Expect = 6e-08 Identities = 24/25 (96%), Positives = 25/25 (100%) Frame = -3 Query: 438 TARGEEGMTLFFVCCNPNCGHRWRD 364 T+RGEEGMTLFFVCCNPNCGHRWRD Sbjct: 90 TSRGEEGMTLFFVCCNPNCGHRWRD 114 >ref|XP_006406782.1| hypothetical protein EUTSA_v10021989mg [Eutrema salsugineum] gi|557107928|gb|ESQ48235.1| hypothetical protein EUTSA_v10021989mg [Eutrema salsugineum] Length = 114 Score = 62.0 bits (149), Expect = 8e-08 Identities = 24/25 (96%), Positives = 25/25 (100%) Frame = -3 Query: 438 TARGEEGMTLFFVCCNPNCGHRWRD 364 TARGEEGMTLFFVCCNPNCGHRWR+ Sbjct: 90 TARGEEGMTLFFVCCNPNCGHRWRE 114 >ref|XP_006299525.1| hypothetical protein CARUB_v10015697mg [Capsella rubella] gi|482568234|gb|EOA32423.1| hypothetical protein CARUB_v10015697mg [Capsella rubella] Length = 114 Score = 62.0 bits (149), Expect = 8e-08 Identities = 24/25 (96%), Positives = 25/25 (100%) Frame = -3 Query: 438 TARGEEGMTLFFVCCNPNCGHRWRD 364 TARGEEGMTLFFVCCNPNCGHRWR+ Sbjct: 90 TARGEEGMTLFFVCCNPNCGHRWRE 114 >ref|XP_002883036.1| hypothetical protein ARALYDRAFT_318462 [Arabidopsis lyrata subsp. lyrata] gi|297328876|gb|EFH59295.1| hypothetical protein ARALYDRAFT_318462 [Arabidopsis lyrata subsp. lyrata] Length = 114 Score = 62.0 bits (149), Expect = 8e-08 Identities = 24/25 (96%), Positives = 25/25 (100%) Frame = -3 Query: 438 TARGEEGMTLFFVCCNPNCGHRWRD 364 TARGEEGMTLFFVCCNPNCGHRWR+ Sbjct: 90 TARGEEGMTLFFVCCNPNCGHRWRE 114 >ref|NP_188323.1| DNA-directed RNA polymerases II, IV and V subunit 9A [Arabidopsis thaliana] gi|75126970|sp|Q6NLH0.1|RPB9A_ARATH RecName: Full=DNA-directed RNA polymerases II, IV and V subunit 9A gi|45752612|gb|AAS76204.1| At3g16980 [Arabidopsis thaliana] gi|46359779|gb|AAS88753.1| At3g16980 [Arabidopsis thaliana] gi|332642370|gb|AEE75891.1| DNA-directed RNA polymerase NRPB9A/NRPD9A/NRPE9A [Arabidopsis thaliana] Length = 114 Score = 62.0 bits (149), Expect = 8e-08 Identities = 24/25 (96%), Positives = 25/25 (100%) Frame = -3 Query: 438 TARGEEGMTLFFVCCNPNCGHRWRD 364 TARGEEGMTLFFVCCNPNCGHRWR+ Sbjct: 90 TARGEEGMTLFFVCCNPNCGHRWRE 114 >ref|XP_004981893.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like [Setaria italica] Length = 115 Score = 61.6 bits (148), Expect = 1e-07 Identities = 24/25 (96%), Positives = 25/25 (100%) Frame = -3 Query: 438 TARGEEGMTLFFVCCNPNCGHRWRD 364 TARGEEGMTLFFVCCNP+CGHRWRD Sbjct: 91 TARGEEGMTLFFVCCNPSCGHRWRD 115 >gb|EMJ24706.1| hypothetical protein PRUPE_ppa013594mg [Prunus persica] Length = 114 Score = 61.6 bits (148), Expect = 1e-07 Identities = 24/25 (96%), Positives = 25/25 (100%) Frame = -3 Query: 438 TARGEEGMTLFFVCCNPNCGHRWRD 364 TARGEEGMTLFFVCCNP+CGHRWRD Sbjct: 90 TARGEEGMTLFFVCCNPSCGHRWRD 114 >gb|ESW10991.1| hypothetical protein PHAVU_009G256100g [Phaseolus vulgaris] Length = 114 Score = 61.2 bits (147), Expect = 1e-07 Identities = 24/25 (96%), Positives = 25/25 (100%) Frame = -3 Query: 438 TARGEEGMTLFFVCCNPNCGHRWRD 364 TARGEEGMTLFFVCCNPNCG+RWRD Sbjct: 90 TARGEEGMTLFFVCCNPNCGYRWRD 114 >ref|XP_004295094.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like [Fragaria vesca subsp. vesca] Length = 114 Score = 61.2 bits (147), Expect = 1e-07 Identities = 24/25 (96%), Positives = 25/25 (100%) Frame = -3 Query: 438 TARGEEGMTLFFVCCNPNCGHRWRD 364 TARGEEGMTLFFVCCNPNCG+RWRD Sbjct: 90 TARGEEGMTLFFVCCNPNCGYRWRD 114 >ref|XP_002962042.1| hypothetical protein SELMODRAFT_77443 [Selaginella moellendorffii] gi|302775260|ref|XP_002971047.1| hypothetical protein SELMODRAFT_95006 [Selaginella moellendorffii] gi|300161029|gb|EFJ27645.1| hypothetical protein SELMODRAFT_95006 [Selaginella moellendorffii] gi|300170701|gb|EFJ37302.1| hypothetical protein SELMODRAFT_77443 [Selaginella moellendorffii] Length = 114 Score = 61.2 bits (147), Expect = 1e-07 Identities = 24/25 (96%), Positives = 25/25 (100%) Frame = -3 Query: 438 TARGEEGMTLFFVCCNPNCGHRWRD 364 TARGEEGMTLFFVCCNPNCG+RWRD Sbjct: 90 TARGEEGMTLFFVCCNPNCGYRWRD 114 >ref|XP_001782379.1| predicted protein [Physcomitrella patens] gi|162666171|gb|EDQ52833.1| predicted protein [Physcomitrella patens] Length = 114 Score = 61.2 bits (147), Expect = 1e-07 Identities = 24/25 (96%), Positives = 25/25 (100%) Frame = -3 Query: 438 TARGEEGMTLFFVCCNPNCGHRWRD 364 TARGEEGMTLFFVCCNPNCG+RWRD Sbjct: 90 TARGEEGMTLFFVCCNPNCGYRWRD 114 >ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9 [Vitis vinifera] gi|147769002|emb|CAN66735.1| hypothetical protein VITISV_024186 [Vitis vinifera] gi|296083263|emb|CBI22899.3| unnamed protein product [Vitis vinifera] Length = 114 Score = 61.2 bits (147), Expect = 1e-07 Identities = 24/25 (96%), Positives = 25/25 (100%) Frame = -3 Query: 438 TARGEEGMTLFFVCCNPNCGHRWRD 364 TARGEEGMTLFFVCCNPNCG+RWRD Sbjct: 90 TARGEEGMTLFFVCCNPNCGYRWRD 114