BLASTX nr result

ID: Ephedra27_contig00016904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00016904
         (390 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25219.1| unknown [Picea sitchensis]                              70   4e-10
gb|ABR16492.1| unknown [Picea sitchensis]                              64   3e-08
gb|ABR17776.1| unknown [Picea sitchensis]                              62   6e-08
gb|ADE76554.1| unknown [Picea sitchensis]                              62   8e-08

>gb|ABK25219.1| unknown [Picea sitchensis]
          Length = 563

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
 Frame = +1

Query: 97  NEKKRIVIRRVRQGIMTHGFVSFTRPGGDQTTDMRLGVSSHTESTN-VNTELKEWIDEAW 273
           + +++ VI RVR+    HGFV F R G   T D RLGV +H    N + +E+ EW+++AW
Sbjct: 404 SSEQKAVITRVRRLPKRHGFVVFCREG-QTTVDFRLGVVTHAADLNDIRSEMVEWVEKAW 462

Query: 274 KHGEGNKLDFSGCGKGNLEVLAVRYKRAETYATEDFKLR 390
           +    ++L F     G   ++ +RYK  ETY TED+K R
Sbjct: 463 RDRTPDQL-FVFPHPGRFLMMNIRYKETETYVTEDWKFR 500


>gb|ABR16492.1| unknown [Picea sitchensis]
          Length = 582

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
 Frame = +1

Query: 58  EPCIPVDGDDDGSNEKKRIVIRRVRQGIMTHGFVSFTRPGGDQTTDMRLGVSSH-TESTN 234
           EP +        ++ ++R VI R+R     HGFV+F R  G  TTD RL V +H  +  N
Sbjct: 401 EPAMLNPSSRSPTSSEQRAVITRIRGLPKRHGFVTFCRE-GRTTTDFRLAVVTHEADLNN 459

Query: 235 VNTELKEWIDEAWKHGEGNKLDFSGCGKGNLEVLAVRYKRAETYATEDFKLR 390
           +  E+ + +D+AW+    ++L       G    + +RYK  ETY TED+K R
Sbjct: 460 IRPEMVQLVDQAWRDRTPDQL-LVFPPPGRFLAINIRYKETETYVTEDWKFR 510


>gb|ABR17776.1| unknown [Picea sitchensis]
          Length = 433

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
 Frame = +1

Query: 58  EPCIPVDGDDDGSNEKKRIVIRRVRQGIMTHGFVSFTRPGGDQTTDMRLGVSSH-TESTN 234
           EP +        ++ +++ VI R+R     HGFV+F R  G  TTD RL V +H  +  N
Sbjct: 252 EPAMLNPSSRSPTSSEQKAVITRIRGLPKRHGFVTFCRE-GRTTTDFRLAVVTHEADLNN 310

Query: 235 VNTELKEWIDEAWKHGEGNKLDFSGCGKGNLEVLAVRYKRAETYATEDFKLR 390
           +  E+ + +D+AW+    ++L       G    + +RYK  ETY TED+K R
Sbjct: 311 IRPEMVQLVDQAWRDRTPDQL-LVFPPPGRFLAINIRYKETETYVTEDWKFR 361


>gb|ADE76554.1| unknown [Picea sitchensis]
          Length = 168

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
 Frame = +1

Query: 100 EKKRIVIRRVRQGIMTHGFVSFTRPGGDQTTDMRLGVSSH-TESTNVNTELKEWIDEAWK 276
           E++   I  VR+    H FV+F R G   T+D R+G+++H  +  N+  E+ EW+D+AW+
Sbjct: 6   EERPAAITSVRRLARRHVFVAFCREG-QMTSDFRMGLTTHEADVANIPAEMVEWVDQAWR 64

Query: 277 HGEGNK-LDFSGCGKGNLEVLAVRYKRAETYATEDFKLR 390
           +   N+ L F     G   V+ + YK  ET+ TED+K R
Sbjct: 65  NRNPNQSLVFP--PPGRFLVINICYKETETFLTEDWKFR 101


Top