BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00016773
         (615 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]    62   1e-07
ref|XP_002515553.1| pentatricopeptide repeat-containing protein,...    60   6e-07
ref|XP_006838473.1| hypothetical protein AMTR_s00002p00150300 [A...    59   8e-07
tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea m...    59   1e-06
tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea m...    59   1e-06
ref|XP_004288209.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_006828862.1| hypothetical protein AMTR_s00001p00165480 [A...    57   4e-06
ref|XP_004250536.1| PREDICTED: putative pentatricopeptide repeat...    57   4e-06
ref|XP_004490829.1| PREDICTED: putative pentatricopeptide repeat...    57   5e-06
ref|XP_006447755.1| hypothetical protein CICLE_v10014182mg [Citr...    56   7e-06
ref|XP_003637306.1| Pentatricopeptide repeat-containing protein,...    56   7e-06
ref|XP_006594401.1| PREDICTED: pentatricopeptide repeat-containi...    56   9e-06
ref|XP_006594395.1| PREDICTED: pentatricopeptide repeat-containi...    56   9e-06

>ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like
            [Vitis vinifera]
          Length = 822

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 3/161 (1%)
 Frame = +3

Query: 9    LIAQLCELGKLFEANRLIWIMLDKGILPDKAIVSAVKRIPXXXXXXXXXXXXXXXXTEKK 188
            L++ LC  G+ +EA +L+  M ++G  PD+ I  ++  I                  E K
Sbjct: 655  LVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLL-IAHCKNLEVDHALKIFHSIEAK 713

Query: 189  NA---MEDYECLILRIFREGDVIVAMRLFESALLKGYVPNQDTWSMFFDSFLENNETDMC 359
                 +  Y  LI  + + G V  A  LF++ L K +  ++  W++  D  L+  E D+C
Sbjct: 714  GFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLC 773

Query: 360  LRCFKLLKKIGLQHPEEMYEALVSQLAREGKTSEADSLVNK 482
            ++   +++        + Y  L  +L+R GK+ E++ L +K
Sbjct: 774  MKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADK 814


>emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 3/161 (1%)
 Frame = +3

Query: 9    LIAQLCELGKLFEANRLIWIMLDKGILPDKAIVSAVKRIPXXXXXXXXXXXXXXXXTEKK 188
            L++ LC  G+ +EA +L+  M ++G  PD+ I  ++  I                  E K
Sbjct: 795  LVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLL-IAHCKNLEVDHALKIFHSIEAK 853

Query: 189  NA---MEDYECLILRIFREGDVIVAMRLFESALLKGYVPNQDTWSMFFDSFLENNETDMC 359
                 +  Y  LI  + + G V  A  LF++ L K +  ++  W++  D  L+  E D+C
Sbjct: 854  GFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLC 913

Query: 360  LRCFKLLKKIGLQHPEEMYEALVSQLAREGKTSEADSLVNK 482
            ++   +++        + Y  L  +L+R GK+ E++ L +K
Sbjct: 914  MKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADK 954


>ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545497|gb|EEF47002.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 927

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 42/165 (25%), Positives = 70/165 (42%)
 Frame = +3

Query: 9   LIAQLCELGKLFEANRLIWIMLDKGILPDKAIVSAVKRIPXXXXXXXXXXXXXXXXTEKK 188
           L++ LC+ GK+ EA  L   MLDKG+ P K                              
Sbjct: 459 LLSWLCKEGKMSEATTLWQKMLDKGLAPTKV----------------------------- 489

Query: 189 NAMEDYECLILRIFREGDVIVAMRLFESALLKGYVPNQDTWSMFFDSFLENNETDMCLRC 368
                Y  +IL   R+G++ +A  +F   L  G  PN  T+S+  D + +N +T+     
Sbjct: 490 ----SYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYV 545

Query: 369 FKLLKKIGLQHPEEMYEALVSQLAREGKTSEADSLVNKTSKRSFV 503
           F  +    +   +  Y   ++ L + G+TSEA  ++ K  ++ FV
Sbjct: 546 FDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFV 590


>ref|XP_006838473.1| hypothetical protein AMTR_s00002p00150300 [Amborella trichopoda]
           gi|548840979|gb|ERN01042.1| hypothetical protein
           AMTR_s00002p00150300 [Amborella trichopoda]
          Length = 619

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 4/174 (2%)
 Frame = +3

Query: 6   ILIAQLCELGKLFEANRLIWIMLDKGILPD----KAIVSAVKRIPXXXXXXXXXXXXXXX 173
           ILIA+ C  G+L EA  L   M++K + P       I++   R+                
Sbjct: 158 ILIARHCWAGQLDEATELFREMIEKRVSPGLFTFNTIIAGHSRLGLVDEAFSLYKLMENF 217

Query: 174 XTEKKNAMEDYECLILRIFREGDVIVAMRLFESALLKGYVPNQDTWSMFFDSFLENNETD 353
                 ++  Y  L++ + REG ++ A RL +  LL+G+ PN+  +++  D +  N E  
Sbjct: 218 GLAP--SIVTYCSLLVGLCREGRMLEAERLMDEMLLRGFPPNRVAFTILIDGYFRNGEIS 275

Query: 354 MCLRCFKLLKKIGLQHPEEMYEALVSQLAREGKTSEADSLVNKTSKRSFVL*NF 515
           + L  +  ++  G+      Y A ++ L +   T EA     + S+R  V  NF
Sbjct: 276 LALGLWNDMEGKGISPDVVAYSAFINGLCKSNLTDEACEYFREMSRRGVVPNNF 329


>tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
          Length = 374

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 2/167 (1%)
 Frame = +3

Query: 9   LIAQLCELGKLFEANRLIWIMLDKGILPDKAIVSAVKRIPXXXXXXXXXXXXXXXXTEK- 185
           L   LC + +L EA  L+ IM++ G++P+    + +  I                  EK 
Sbjct: 184 LACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKG 243

Query: 186 -KNAMEDYECLILRIFREGDVIVAMRLFESALLKGYVPNQDTWSMFFDSFLENNETDMCL 362
              ++  Y  +I    ++G +  A R  +    KG+VP+  T++        N + D+ L
Sbjct: 244 ATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVAL 303

Query: 363 RCFKLLKKIGLQHPEEMYEALVSQLAREGKTSEADSLVNKTSKRSFV 503
           + F+ +K+ G +     Y AL+S LA+EG++  A  L +   K   +
Sbjct: 304 KLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLI 350


>tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 2/167 (1%)
 Frame = +3

Query: 9   LIAQLCELGKLFEANRLIWIMLDKGILPDKAIVSAVKRIPXXXXXXXXXXXXXXXXTEK- 185
           L   LC + +L EA  L+ IM++ G++P+    + +  I                  EK 
Sbjct: 393 LACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKG 452

Query: 186 -KNAMEDYECLILRIFREGDVIVAMRLFESALLKGYVPNQDTWSMFFDSFLENNETDMCL 362
              ++  Y  +I    ++G +  A R  +    KG+VP+  T++        N + D+ L
Sbjct: 453 ATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVAL 512

Query: 363 RCFKLLKKIGLQHPEEMYEALVSQLAREGKTSEADSLVNKTSKRSFV 503
           + F+ +K+ G +     Y AL+S LA+EG++  A  L +   K   +
Sbjct: 513 KLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLI 559


>ref|XP_004288209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Fragaria vesca subsp. vesca]
          Length = 589

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 32/112 (28%), Positives = 59/112 (52%)
 Frame = +3

Query: 195 MEDYECLILRIFREGDVIVAMRLFESALLKGYVPNQDTWSMFFDSFLENNETDMCLRCFK 374
           M  Y  L+    REG +  A++LF    +KG VPN  T++   D +   N+ +  LR  +
Sbjct: 269 MVTYNSLMYGFCREGRMTEAVKLFRD--IKGCVPNHITYTTLIDGYCRVNDLEEALRLCE 326

Query: 375 LLKKIGLQHPEEMYEALVSQLAREGKTSEADSLVNKTSKRSFVL*NFICKIM 530
           ++K  GL      Y +++ +L +EG+  +A+ L+N+ S+++    N  C  +
Sbjct: 327 VMKSKGLYPGVVTYNSILRKLCQEGRMRDANKLLNEMSEKNVEPDNVTCNTL 378


>ref|XP_006828862.1| hypothetical protein AMTR_s00001p00165480 [Amborella trichopoda]
           gi|548833841|gb|ERM96278.1| hypothetical protein
           AMTR_s00001p00165480 [Amborella trichopoda]
          Length = 903

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 4/171 (2%)
 Frame = +3

Query: 6   ILIAQLCELGKLFEANRLIWIMLDKGILPDKAIVSAVKRIPXXXXXXXXXXXXXXXXTEK 185
           +LI   C   KL EAN L+ +ML+KG+LP     +A+  I                 T +
Sbjct: 347 VLIDGWCRENKLEEANGLLKMMLEKGVLPSTITYNAL--INGYCKEGRVFSAFELLSTME 404

Query: 186 KNAME----DYECLILRIFREGDVIVAMRLFESALLKGYVPNQDTWSMFFDSFLENNETD 353
           K   +     Y  LI  + RE     AM L +  L  G  P+  T++   + F    + D
Sbjct: 405 KRKCKPNTRTYNELIDGLCRERKPYKAMSLLQKMLDNGLFPSNVTYNTLINGFCGEGKLD 464

Query: 354 MCLRCFKLLKKIGLQHPEEMYEALVSQLAREGKTSEADSLVNKTSKRSFVL 506
           M L  F  + +IGL      Y  L+  L ++G+  +A    N+  +    L
Sbjct: 465 MALCLFNSMSRIGLYPDGFTYTVLIDGLCKKGQLEQAHEFFNEMVQEGICL 515


>ref|XP_004250536.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Solanum lycopersicum]
          Length = 608

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 2/158 (1%)
 Frame = +3

Query: 9   LIAQLCELGKLFEANRLIWIMLDKGILPDKAIVSAVKRIPXXXXXXXXXXXXXXXXTEKK 188
           L+  LC+ G L EA +LI +M++KG+ PDK   + V                     + K
Sbjct: 384 LVNGLCKSGDLGEATKLIHVMVEKGLKPDKITYTTVIDGCCKEGDLDGAFEIKKVMVDNK 443

Query: 189 NAMED--YECLILRIFREGDVIVAMRLFESALLKGYVPNQDTWSMFFDSFLENNETDMCL 362
             ++D  Y  LI  + R+G  + A R+    L  G  P+   +++  D F +  +  M  
Sbjct: 444 IELDDVAYTALITGLCRQGRTVDAERILTEMLNIGLKPDDPIYTVVIDGFCKKGDMKMGF 503

Query: 363 RCFKLLKKIGLQHPEEMYEALVSQLAREGKTSEADSLV 476
           +  + ++  G       Y  L++ L R+G+   A+ L+
Sbjct: 504 KLLRQMRSNGHAPNVITYNVLLNGLCRQGQMRNAEMLL 541


>ref|XP_004490829.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cicer arietinum]
          Length = 603

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 2/159 (1%)
 Frame = +3

Query: 9   LIAQLCELGKLFEANRLIWIMLDKGILPDKAIVSAVKRIPXXXXXXXXXXXXXXXXTEKK 188
           LI  LC +G L EA +L   M   G  PDK   + +                     E+ 
Sbjct: 382 LINGLCRVGDLKEARKLWEEMSQNGFKPDKITFTTLMDGCCKDGEMESALEIKDRMVEEG 441

Query: 189 NAMED--YECLILRIFREGDVIVAMRLFESALLKGYVPNQDTWSMFFDSFLENNETDMCL 362
             ++D  Y  LI  + R+G V  A R+    L  G+ P+  T++M  DSF +  +  M  
Sbjct: 442 IELDDVAYTALISGLCRDGRVCDAERMLRDMLSAGHRPDDPTYTMVIDSFCKKGDVKMGT 501

Query: 363 RCFKLLKKIGLQHPEEMYEALVSQLAREGKTSEADSLVN 479
           + FK ++  G       Y AL++ L ++G+   A  L++
Sbjct: 502 KLFKEMQSDGRIPGVVTYNALMNGLCKQGQMKNAKMLLD 540


>ref|XP_006447755.1| hypothetical protein CICLE_v10014182mg [Citrus clementina]
            gi|568830449|ref|XP_006469511.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At5g65560-like [Citrus sinensis]
            gi|557550366|gb|ESR60995.1| hypothetical protein
            CICLE_v10014182mg [Citrus clementina]
          Length = 929

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 2/163 (1%)
 Frame = +3

Query: 9    LIAQLCELGKLFEANRLIWIMLDKGILPDKAIVSA--VKRIPXXXXXXXXXXXXXXXXTE 182
            LI  LC  G+ +EA++L+ IM +KG  PD+AI  +  V                    + 
Sbjct: 752  LICGLCREGRSYEADQLVEIMKEKGFCPDRAIYYSLLVAHCRNLEVDSALEIFNLMGISG 811

Query: 183  KKNAMEDYECLILRIFREGDVIVAMRLFESALLKGYVPNQDTWSMFFDSFLENNETDMCL 362
             +  +  Y  LI  + R      A   FES L K +  ++  W++  D  +     D+CL
Sbjct: 812  LEPHLSIYAALISALCRASRTQEAQHFFESMLDKQWNTDEIVWTVLVDGLVTKGLPDLCL 871

Query: 363  RCFKLLKKIGLQHPEEMYEALVSQLAREGKTSEADSLVNKTSK 491
            +   +++        + Y  L ++L++  K+ + D LV + ++
Sbjct: 872  KFLHIMESRNCCINLQTYVILANELSKVDKSIDTDHLVKRVNE 914


>ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula] gi|355503241|gb|AES84444.1|
           Pentatricopeptide repeat-containing protein, partial
           [Medicago truncatula]
          Length = 603

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 38/172 (22%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
 Frame = +3

Query: 3   RILIAQLCELGKLFEANRLIWIMLDKGILPDKA----IVSAVKRIPXXXXXXXXXXXXXX 170
           R+++   C++G + EA++ + +ML++G + D A    I+S                    
Sbjct: 209 RVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVD 268

Query: 171 XXTEKKNAMEDYECLILRIFREGDVIVAMRLFESALLKGYVPNQDTWSMFFDSFLENNET 350
              E    + ++ C+I  + + G +  A  + E  + KG+ PN  T +   D   +   T
Sbjct: 269 MGLEPN--LINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWT 326

Query: 351 DMCLRCFKLLKKIGLQHPEEM-YEALVSQLAREGKTSEADSLVNKTSKRSFV 503
           +   R F  L +     P  + Y A++S   RE K + A+ L+++  ++  V
Sbjct: 327 EKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLV 378


>ref|XP_006594401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like isoform X7 [Glycine max]
          Length = 542

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 29/109 (26%), Positives = 57/109 (52%)
 Frame = +3

Query: 204 YECLILRIFREGDVIVAMRLFESALLKGYVPNQDTWSMFFDSFLENNETDMCLRCFKLLK 383
           Y  LI R  +EG +  AMR+F    +K   PN  T++   D + + NE +  L+  ++++
Sbjct: 269 YNSLIYRFCKEGRMREAMRMFSE--IKNATPNHVTYTTLIDGYCKTNELEEALKMREMME 326

Query: 384 KIGLQHPEEMYEALVSQLAREGKTSEADSLVNKTSKRSFVL*NFICKIM 530
             GL      + +++ +L ++G+  +A+ L+N+ S+R     N  C  +
Sbjct: 327 AKGLYPGVVTFNSILRKLCQDGRIRDANKLLNEMSERKIQADNITCNTL 375


>ref|XP_006594395.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like isoform X1 [Glycine max]
           gi|571499072|ref|XP_006594396.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g38730-like isoform X2 [Glycine max]
           gi|571499074|ref|XP_006594397.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g38730-like isoform X3 [Glycine max]
           gi|571499076|ref|XP_006594398.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g38730-like isoform X4 [Glycine max]
           gi|571499078|ref|XP_006594399.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g38730-like isoform X5 [Glycine max]
           gi|571499080|ref|XP_006594400.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g38730-like isoform X6 [Glycine max]
          Length = 587

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 29/109 (26%), Positives = 57/109 (52%)
 Frame = +3

Query: 204 YECLILRIFREGDVIVAMRLFESALLKGYVPNQDTWSMFFDSFLENNETDMCLRCFKLLK 383
           Y  LI R  +EG +  AMR+F    +K   PN  T++   D + + NE +  L+  ++++
Sbjct: 269 YNSLIYRFCKEGRMREAMRMFSE--IKNATPNHVTYTTLIDGYCKTNELEEALKMREMME 326

Query: 384 KIGLQHPEEMYEALVSQLAREGKTSEADSLVNKTSKRSFVL*NFICKIM 530
             GL      + +++ +L ++G+  +A+ L+N+ S+R     N  C  +
Sbjct: 327 AKGLYPGVVTFNSILRKLCQDGRIRDANKLLNEMSERKIQADNITCNTL 375