BLASTX nr result

ID: Ephedra27_contig00016752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00016752
         (926 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                             185   2e-44
ref|XP_006853955.1| hypothetical protein AMTR_s00036p00213730 [A...    61   7e-07
ref|XP_004298598.1| PREDICTED: TMV resistance protein N-like [Fr...    58   6e-06
ref|XP_002520182.1| leucine-rich repeat containing protein, puta...    57   1e-05

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score =  185 bits (469), Expect = 2e-44
 Identities = 98/259 (37%), Positives = 155/259 (59%)
 Frame = +1

Query: 115 KEVLNEGMSFVDSLEKYISKQGNKDVTHAIAPFLQKVGELHWITSALFLVGKAIERWELL 294
           KE L+E  +FV  +          D    +   LQ +G  H  T+ L +V   +ER+E +
Sbjct: 132 KEFLSEATNFVKDIIP-------GDAKTIVRGLLQGMGTAHLATTGLLVVANILERFEDV 184

Query: 295 TENKEESVRLMEEMVGLAALLIQIRERKIDNPNMQASIKDGVEKLIKGCVVCCYQISSSS 474
           ++N++E   +++EM+ LA ++ QI+ER      M   +KD  E +++G + CC Q++SS 
Sbjct: 185 SDNQDECFHVLKEMIFLAKVVKQIKERPQLQQRMHDEVKDATELIVEGSIKCCSQMASSQ 244

Query: 475 LRGVLVATYDKRRLSELRQEIEITYRNITSHMTVCIYDAITCINKTPVRPRNVMYPKHAV 654
                  + +K  L E+ Q++++ Y++I   M + IYD   C      R     YP+HAV
Sbjct: 245 FSNFFSTSVNKEELGEVAQQLDVKYKHIYIQMGIEIYDVGQCKKANLSR----RYPEHAV 300

Query: 655 GIDEQVAEIIKMLDYESDTNALAVVLHKFGGMGKTTLAEAVFSSLDIRDCKYSMVQLFRD 834
           G++E   E+I +L++ S  NA+AV+LH FGGMGKTTLA+AVFS +DI++C+YS VQLF +
Sbjct: 301 GLEESSREVIDLLEWGSQQNAVAVILHGFGGMGKTTLADAVFSMVDIKECQYSTVQLFEN 360

Query: 835 TKAVPDIVELQKTIIADLS 891
             + P I+ELQK I+ DL+
Sbjct: 361 IDSFPKIIELQKLILRDLT 379


>ref|XP_006853955.1| hypothetical protein AMTR_s00036p00213730 [Amborella trichopoda]
           gi|548857623|gb|ERN15422.1| hypothetical protein
           AMTR_s00036p00213730 [Amborella trichopoda]
          Length = 1230

 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 38/142 (26%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
 Frame = +1

Query: 490 VATYDKRRLSELRQEIEITYRNITSHMTVCIYDAITCINKTPVRPRNVMYPKHAVGIDEQ 669
           VA ++   + + R E ++  + I  H+++ +      + KTP+   +     H +G+D +
Sbjct: 132 VADFNGWNMKDFRTEAKLVNK-IVKHVSMEV------VRKTPLHVAD-----HPIGLDSR 179

Query: 670 VAEIIKMLDYESDTNALAVVLHKFGGMGKTTLAEAVFSSLDIRDCKYSMVQLFRD-TKAV 846
           VA+++++LD  ++   + + +H  GG+GKTTLA+AVF+ +         +   R+ ++ +
Sbjct: 180 VADVMRLLDLNTNDTQM-IGIHGMGGIGKTTLAKAVFNHIKSSFTSSCFLSDIREKSENI 238

Query: 847 PDIVELQKTIIADLSGKQPTNI 912
             +V LQK ++ DL  ++ TNI
Sbjct: 239 SGVVTLQKQLLNDLFNEEDTNI 260


>ref|XP_004298598.1| PREDICTED: TMV resistance protein N-like [Fragaria vesca subsp.
           vesca]
          Length = 1431

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 3/161 (1%)
 Frame = +1

Query: 445 VCCYQISSSSLRGVLVATYDKRRLSELRQEIEITYRNITSHMTVCIYDAITCINKTPVRP 624
           VC ++ + + + G+    YD  + +EL Q +  T               +  IN+TPV  
Sbjct: 135 VCEWRKAMAKVGGIAGFVYDSSKEAELIQSLVKT--------------VLAEINRTPVG- 179

Query: 625 RNVMYPKHAVGIDEQVAEIIKMLDYESDTNALAVVLHKFGGMGKTTLAEAVFSSLDIRDC 804
                  + VG+D ++ +++++LD  S ++   V +H  GG+GKTTLA A+F+ L  +  
Sbjct: 180 ----LAAYTVGLDSRIEDMMRLLDVRS-SDVRVVGVHGMGGVGKTTLATAIFNRLVGQFD 234

Query: 805 KYSMVQLFRDTKA-VPDIVELQKTIIADLS-GKQP-TNIQT 918
            +S +   R+  A    +V LQ  +I +LS GK P T+I+T
Sbjct: 235 GHSFISNVREVSAGDKGLVSLQNKLINNLSPGKMPVTDIET 275


>ref|XP_002520182.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223540674|gb|EEF42237.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 1349

 Score = 57.0 bits (136), Expect = 1e-05
 Identities = 37/113 (32%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
 Frame = +1

Query: 580 IYDAITCINKTPVRPRNVMYPKHAVGIDEQVAEIIKMLDYESDTNALAVV-LHKFGGMGK 756
           + + +T ++ TP+       PKH VG+D ++ E++ MLD +   N + V+ ++  GG GK
Sbjct: 171 VKNILTKLSNTPLG-----IPKHPVGLDSRLQELMNMLDIKG--NGVKVMGIYGMGGAGK 223

Query: 757 TTLAEAVFSSLDIRDCKYSMVQLFRDTKAVPDIVE-LQKTIIADLSGKQPTNI 912
           +TLA+A+F+ L +   + S +   R+T    D ++ LQK +I DLS     N+
Sbjct: 224 STLAKALFNKLVMHFERRSFISNIRETSNQKDGLDALQKRLIRDLSPDSAANV 276


Top