BLASTX nr result
ID: Ephedra27_contig00016698
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00016698
(1500 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN70311.1| hypothetical protein VITISV_022886 [Vitis vinifera] 48 2e-10
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 40 1e-09
ref|XP_006655090.1| PREDICTED: uncharacterized protein LOC102699... 37 3e-07
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 51 9e-07
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 47 2e-06
>emb|CAN70311.1| hypothetical protein VITISV_022886 [Vitis vinifera]
Length = 1856
Score = 48.1 bits (113), Expect(4) = 2e-10
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = +1
Query: 100 KKMNFPRKLKNWIYNLISSSTFAISINGRDNPYFKSTNRLRRGGPLSSSLFVI 258
+KM F K W+++ +SS+ F+I +NG +F ST LR+G PLS LFV+
Sbjct: 1489 QKMGFGPKWMGWMWSCVSSAKFSILVNGVPAGFFPSTRGLRQGDPLSPYLFVM 1541
Score = 30.8 bits (68), Expect(4) = 2e-10
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 368 MEKAKKK*VRKFLDLLDTYQKFRAQKIN--KENVVFFHAPEDIKLLTDELLYGGANLPIK 541
+ +A K+ V +L ++ +IN K ++ EDI L EL +LP
Sbjct: 1559 ISRASKEQVSHLSWILFWFEAASGLRINLAKSEIIPXGDVEDILELAAELGGRVGSLPSH 1618
Query: 542 LLGIPLHVKRKAQEIW*FLVDKLKKKI 622
LG+PL V +A +W + +++++++
Sbjct: 1619 YLGLPLGVPNRATSMWDGVEERIRRRL 1645
Score = 29.3 bits (64), Expect(4) = 2e-10
Identities = 12/43 (27%), Positives = 28/43 (65%)
Frame = +3
Query: 633 RWFSSASKVTIPKSIMSSITIFYLAIFKIPIRIFTKL**RRRD 761
++ S ++T+ KS ++S+ I+ L+IF++P + ++ +RD
Sbjct: 1651 QYISXGGRITLIKSTLASLPIYQLSIFRMPKSVAKRVEKTQRD 1693
Score = 23.5 bits (49), Expect(4) = 2e-10
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 805 KVGLCFGHLKLMNIAMMGKLVWDLIKNKNS 894
K GL + +N A++GK +W KN+
Sbjct: 1719 KGGLGLRRIATLNRALLGKWIWRFACEKNN 1748
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 40.0 bits (92), Expect(4) = 1e-09
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +1
Query: 106 MNFPRKLKNWIYNLISSSTFAISINGRDNPYFKSTNRLRRGGPLSSSLFVI 258
MNF +WI I++++F++ +NG YF+S LR+G LS LFVI
Sbjct: 266 MNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRGLRQGCSLSPYLFVI 316
Score = 32.7 bits (73), Expect(4) = 1e-09
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +2
Query: 368 MEKAKKK*VRKFLDLLDTYQKFRAQKINKENVVFFHA---PEDIKLLTDELLYGGANLPI 538
+ K + + L++ D + K +I+ E + A P + + + L+ LP+
Sbjct: 357 LSDGKTRSIEGILEVFDEFCKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPV 416
Query: 539 KLLGIPLHVKRKAQEIW*FLVDKLKKKI 622
+ LG+PL KR + L++++KK+I
Sbjct: 417 RYLGLPLVTKRLTSADYSPLLEQIKKRI 444
Score = 32.0 bits (71), Expect(4) = 1e-09
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +3
Query: 624 FTLRWFSSASKVTIPKSIMSSITIFYLAIFKIP 722
+T R+FS A + + KS++ SI F+LA F++P
Sbjct: 447 WTFRFFSFAGRFNLIKSVLWSICNFWLAAFRLP 479
Score = 24.6 bits (52), Expect(4) = 1e-09
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 811 GLCFGHLKLMNIAMMGKLVWDLIKNKNS 894
GL +LK N KLVW +I N NS
Sbjct: 520 GLGLRNLKEANDVSCLKLVWRIISNSNS 547
>ref|XP_006655090.1| PREDICTED: uncharacterized protein LOC102699406 [Oryza brachyantha]
Length = 1170
Score = 37.4 bits (85), Expect(4) = 3e-07
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +1
Query: 103 KMNFPRKLKNWIYNLISSSTFAISINGRDNPYFKSTNRLRRGGPLSSSLFVILA 264
K+ F N + +++ +F + +NG+ FK + +R+G P+S LF+I A
Sbjct: 502 KLGFAESFVNLVMKCVTTVSFFVRVNGKLTKSFKPSRGIRQGDPISPYLFLICA 555
Score = 32.0 bits (71), Expect(4) = 3e-07
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Frame = +2
Query: 371 EKAKKK*VRKFLDLLDTYQKFRAQKINKE-NVVFF--HAPEDIKLLTDELLY-GGANLPI 538
E+A ++ V + +LD Y K Q +N+E + VFF + + +K + E L+ L
Sbjct: 556 EEASQRGVDRIQMILDAYSKGSGQLVNREKSAVFFSKNCSDGMKAVVREALHIEKEALAE 615
Query: 539 KLLGIPLHVKRKAQEIW*FLVDKLK 613
K LG+P + R + ++ ++ +L+
Sbjct: 616 KYLGLPTAIGRSKKGVFEYMTGRLR 640
Score = 30.0 bits (66), Expect(4) = 3e-07
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Frame = +1
Query: 787 QKWSD-----EKVGLCFGHLKLMNIAMMGKLVWDLIKNKNS 894
QKW ++ G+ F L L N+AM+GK W LI+ +S
Sbjct: 706 QKWDHLTRPKKQGGMSFMDLHLFNLAMLGKQGWRLIERPDS 746
Score = 21.2 bits (43), Expect(4) = 3e-07
Identities = 8/34 (23%), Positives = 19/34 (55%)
Frame = +3
Query: 642 SSASKVTIPKSIMSSITIFYLAIFKIPIRIFTKL 743
S A + + KS+ ++ + ++ F+IP+ K+
Sbjct: 652 SCAGREVLLKSVAQAVPTYPMSCFQIPLDTCNKM 685
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 51.2 bits (121), Expect(2) = 9e-07
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = +1
Query: 100 KKMNFPRKLKNWIYNLISSSTFAISINGRDNPYFKSTNRLRRGGPLSSSLFVI 258
K N P + NWI I+S++F+I+++G YFK + LR+G PLS SLFVI
Sbjct: 610 KAANAPPRFVNWIKQCITSTSFSINVSGSLCGYFKGSKGLRQGDPLSPSLFVI 662
Score = 30.0 bits (66), Expect(2) = 9e-07
Identities = 23/108 (21%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Frame = +2
Query: 320 PSITRKK*AQIANVDDME---KAKKK*VRKFLDLLDTYQKFRAQKINKENVVFFHAPEDI 490
P + + + +A DD+ K +R +L++++ ++N E + A +
Sbjct: 684 PKASEVRISSLAFADDLMIFYDGKASSLRGIKSVLESFKNLSGLEMNTEKSAVYTAGLED 743
Query: 491 KLLTDELLYGGAN--LPIKLLGIPLHVKRKAQEIW*FLVDKLKKKIFH 628
D L +G N P + LG+PL ++ + + L+DK+ + H
Sbjct: 744 TDKEDTLAFGFVNGTFPFRYLGLPLLHRKLRRSDYSQLIDKIAARFNH 791
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 46.6 bits (109), Expect(2) = 2e-06
Identities = 25/81 (30%), Positives = 44/81 (54%)
Frame = +1
Query: 103 KMNFPRKLKNWIYNLISSSTFAISINGRDNPYFKSTNRLRRGGPLSSSLFVILANSHETF 282
K+ FP + + N ++S+ F++ +NG+ + F + LR+G PLS LFV+ A T
Sbjct: 604 KLGFPTRYTKLVMNCVTSARFSVLVNGQPSRNFFPSRGLRQGDPLSPFLFVVCAEGLSTL 663
Query: 283 NRE*TNGNSKYKTIYH*KEIG 345
R+ ++ K + H +IG
Sbjct: 664 LRD-----AEEKKVIHGVKIG 679
Score = 33.9 bits (76), Expect(2) = 2e-06
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +2
Query: 374 KAKKK*VRKFLDLLDTYQKFRAQKINKENVVFFHA----PEDIKLLTDELLYGGANLPIK 541
+A ++ V +D+L TY+ QK+N E ++ P+ I L +L + K
Sbjct: 699 RATEEEVENVMDILSTYEAASGQKLNMEKSEMSYSRNLEPDKINTLQMKLAFKTVEGHEK 758
Query: 542 LLGIPLHVKRKAQEIW*FLVDKLKKKI 622
LG+P + + ++ + D++ KK+
Sbjct: 759 YLGLPTFIGSSKKRVFQAIQDRVWKKL 785