BLASTX nr result
ID: Ephedra27_contig00016643
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00016643
(654 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR16805.1| unknown [Picea sitchensis] 91 3e-16
gb|EOY23705.1| Plastid-specific 30S ribosomal protein 1 [Theobro... 90 5e-16
ref|NP_001233834.1| chloroplast-specific ribosomal protein [Sola... 88 2e-15
ref|XP_001758609.1| predicted protein [Physcomitrella patens] gi... 87 3e-15
ref|XP_001775453.1| predicted protein [Physcomitrella patens] gi... 87 3e-15
ref|XP_006347313.1| PREDICTED: ribosome-binding factor PSRP1, ch... 87 4e-15
gb|ACV83721.1| chloroplast ribosomal protein [Solanum tuberosum] 87 4e-15
gb|EMT25487.1| 30S ribosomal protein 1, chloroplastic [Aegilops ... 87 6e-15
dbj|BAJ98981.1| predicted protein [Hordeum vulgare subsp. vulgare] 86 7e-15
ref|XP_004502759.1| PREDICTED: ribosome-binding factor PSRP1, ch... 85 2e-14
gb|AAA34039.1| ribosomal protein 30S subunit [Spinacia oleracea] 85 2e-14
sp|P19954.2|PRSP1_SPIOL RecName: Full=Ribosome-binding factor PS... 85 2e-14
ref|XP_003559644.1| PREDICTED: 30S ribosomal protein 1, chloropl... 84 5e-14
ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, ch... 84 5e-14
gb|ESW08430.1| hypothetical protein PHAVU_009G045100g [Phaseolus... 83 6e-14
gb|AGV54273.1| 30S ribosomal protein [Phaseolus vulgaris] 83 6e-14
gb|EMJ19977.1| hypothetical protein PRUPE_ppa009612mg [Prunus pe... 83 6e-14
ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloropl... 83 8e-14
emb|CBI23087.3| unnamed protein product [Vitis vinifera] 83 8e-14
ref|XP_006493202.1| PREDICTED: ribosome-binding factor PSRP1, ch... 82 1e-13
>gb|ABR16805.1| unknown [Picea sitchensis]
Length = 321
Score = 90.9 bits (224), Expect = 3e-16
Identities = 50/101 (49%), Positives = 66/101 (65%), Gaps = 7/101 (6%)
Frame = +1
Query: 1 KRQPKLTEVLD----DSPLVSDEE-DDIEDVNADKNTYND--GTKIVKEKEFDMLPISTT 159
++QPKL E+L D D+E DD+ DV + D ++V+ K F+M P+S
Sbjct: 198 RKQPKLGELLSTVVMDVKETRDKELDDLADVEEMRYEKIDDLSDEVVRTKYFEMPPMSPE 257
Query: 160 EAAEHLVNLGHDFYVFRNLENGEVNVMYKRKRGGYGLIAPK 282
EA E L+N+ HDFY FRN+E+GEVNV+YKRK GGYGLI PK
Sbjct: 258 EALEQLMNVDHDFYAFRNMESGEVNVLYKRKHGGYGLIVPK 298
>gb|EOY23705.1| Plastid-specific 30S ribosomal protein 1 [Theobroma cacao]
Length = 320
Score = 90.1 bits (222), Expect = 5e-16
Identities = 47/95 (49%), Positives = 63/95 (66%), Gaps = 2/95 (2%)
Frame = +1
Query: 4 RQPKLTEVLDDSPLVSDEEDDIEDVNADKNTYNDGT--KIVKEKEFDMLPISTTEAAEHL 177
R+P V D+ V ++EDD+E V ++ DG +IV+ K FDM P++ +EA E L
Sbjct: 206 REPVAVLVEDEVEAVPEQEDDVEAVPEQED---DGLIDEIVRTKYFDMPPLTVSEAIEQL 262
Query: 178 VNLGHDFYVFRNLENGEVNVMYKRKRGGYGLIAPK 282
N+ HDFY FRN E GE+N++YKRK GGYGLI PK
Sbjct: 263 ENVDHDFYGFRNEETGEINILYKRKAGGYGLIIPK 297
>ref|NP_001233834.1| chloroplast-specific ribosomal protein [Solanum lycopersicum]
gi|51457950|gb|AAU03364.1| chloroplast-specific
ribosomal protein [Solanum lycopersicum]
Length = 311
Score = 88.2 bits (217), Expect = 2e-15
Identities = 45/94 (47%), Positives = 62/94 (65%)
Frame = +1
Query: 4 RQPKLTEVLDDSPLVSDEEDDIEDVNADKNTYNDGTKIVKEKEFDMLPISTTEAAEHLVN 183
R P+ V +D +S EE+ +ED +D T++V++K FDM P+S EA E L N
Sbjct: 201 RDPEALLVQEDLETLSQEEE-VEDDKSDGFV----TEVVRKKSFDMPPLSVNEAIEQLEN 255
Query: 184 LGHDFYVFRNLENGEVNVMYKRKRGGYGLIAPKK 285
+ HDFY FRN E GE+N++Y+RK GGYGLI PK+
Sbjct: 256 VDHDFYGFRNEETGEINIVYRRKEGGYGLIIPKE 289
>ref|XP_001758609.1| predicted protein [Physcomitrella patens]
gi|162690219|gb|EDQ76587.1| predicted protein
[Physcomitrella patens]
Length = 221
Score = 87.4 bits (215), Expect = 3e-15
Identities = 42/103 (40%), Positives = 63/103 (61%), Gaps = 5/103 (4%)
Frame = +1
Query: 1 KRQPKLTEVLDDS-----PLVSDEEDDIEDVNADKNTYNDGTKIVKEKEFDMLPISTTEA 165
+ P++ EVL D P++ + DD+ D +IV+ K F+M P+ EA
Sbjct: 120 RHSPRIGEVLSDEVVDLDPILGRKPDDLPD------------EIVRTKYFEMRPMKPLEA 167
Query: 166 AEHLVNLGHDFYVFRNLENGEVNVMYKRKRGGYGLIAPKKPKS 294
E LVN+GHDFY FRN+E+GE+N++YKR GGYG+I P+ ++
Sbjct: 168 LEQLVNVGHDFYAFRNVESGEINILYKRTHGGYGIIVPRNEEA 210
>ref|XP_001775453.1| predicted protein [Physcomitrella patens]
gi|162673256|gb|EDQ59782.1| predicted protein
[Physcomitrella patens]
Length = 297
Score = 87.4 bits (215), Expect = 3e-15
Identities = 40/91 (43%), Positives = 59/91 (64%)
Frame = +1
Query: 22 EVLDDSPLVSDEEDDIEDVNADKNTYNDGTKIVKEKEFDMLPISTTEAAEHLVNLGHDFY 201
EV+D P++ + DD+ D ++V+ K F+M P+ EA E LVN+GHDFY
Sbjct: 208 EVVDLDPILERKPDDLPD------------EVVRTKYFEMRPMKPLEALEQLVNVGHDFY 255
Query: 202 VFRNLENGEVNVMYKRKRGGYGLIAPKKPKS 294
FRN+E+GE+N++YKR GGYG+I P+ +S
Sbjct: 256 AFRNVESGEINILYKRTHGGYGIIVPRNDES 286
>ref|XP_006347313.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Solanum
tuberosum]
Length = 312
Score = 87.0 bits (214), Expect = 4e-15
Identities = 43/94 (45%), Positives = 61/94 (64%)
Frame = +1
Query: 4 RQPKLTEVLDDSPLVSDEEDDIEDVNADKNTYNDGTKIVKEKEFDMLPISTTEAAEHLVN 183
R P++ V +D + EE+ +D +D T++V++K FDM P+S EA E L N
Sbjct: 201 RDPEVLLVQEDLETLPQEEEVEDDDKSDGFV----TEVVRKKSFDMPPLSVNEAIEQLEN 256
Query: 184 LGHDFYVFRNLENGEVNVMYKRKRGGYGLIAPKK 285
+ HDFY FRN E GE+N++Y+RK GGYGLI PK+
Sbjct: 257 VDHDFYGFRNEETGEINIVYRRKEGGYGLIIPKE 290
>gb|ACV83721.1| chloroplast ribosomal protein [Solanum tuberosum]
Length = 280
Score = 87.0 bits (214), Expect = 4e-15
Identities = 43/94 (45%), Positives = 61/94 (64%)
Frame = +1
Query: 4 RQPKLTEVLDDSPLVSDEEDDIEDVNADKNTYNDGTKIVKEKEFDMLPISTTEAAEHLVN 183
R P++ V +D + EE+ +D +D T++V++K FDM P+S EA E L N
Sbjct: 173 RDPEVLLVQEDLETLPQEEEVEDDDKSDGFV----TEVVRKKSFDMPPLSVNEAIEQLEN 228
Query: 184 LGHDFYVFRNLENGEVNVMYKRKRGGYGLIAPKK 285
+ HDFY FRN E GE+N++Y+RK GGYGLI PK+
Sbjct: 229 VDHDFYGFRNEETGEINIVYRRKEGGYGLIIPKE 262
>gb|EMT25487.1| 30S ribosomal protein 1, chloroplastic [Aegilops tauschii]
Length = 229
Score = 86.7 bits (213), Expect = 6e-15
Identities = 45/93 (48%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Frame = +1
Query: 16 LTEVLDDSPLVSDEEDD--IEDVNA-DKNTYNDGTKIVKEKEFDMLPISTTEAAEHLVNL 186
L++V D+S +EE+D +E + A D+ T TK+V+ K F+M P++ EA E L N+
Sbjct: 121 LSDVEDESEAEEEEEEDELVEVIGAEDEETVL--TKVVRTKVFEMAPLTVDEALEQLENV 178
Query: 187 GHDFYVFRNLENGEVNVMYKRKRGGYGLIAPKK 285
HDFY FRN + GEVN++YKRK GG+GLI PK+
Sbjct: 179 DHDFYAFRNEQTGEVNILYKRKEGGFGLIIPKQ 211
>dbj|BAJ98981.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 301
Score = 86.3 bits (212), Expect = 7e-15
Identities = 43/90 (47%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Frame = +1
Query: 19 TEVLDDSPLVSDEEDDIEDVNA-DKNTYNDGTKIVKEKEFDMLPISTTEAAEHLVNLGHD 195
++V ++S L +E+D +E + A D+ T TK+V+ K F+M P++ EA E L N+ HD
Sbjct: 196 SDVEEESELELEEDDLVEVIGAEDEETVL--TKVVRTKVFEMAPLTVDEALEQLENVDHD 253
Query: 196 FYVFRNLENGEVNVMYKRKRGGYGLIAPKK 285
FY FRN + GEVN++YKRK GG+GLI PK+
Sbjct: 254 FYAFRNEQTGEVNILYKRKEGGFGLIIPKQ 283
>ref|XP_004502759.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic-like [Cicer
arietinum]
Length = 302
Score = 84.7 bits (208), Expect = 2e-14
Identities = 41/82 (50%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Frame = +1
Query: 40 PLVSDEEDDIEDVNADKNTYNDGTK-IVKEKEFDMLPISTTEAAEHLVNLGHDFYVFRNL 216
PL ++EED+IE K + + +V+ K FDM P++ +EA + L N+ HDFY FRN
Sbjct: 198 PLPTEEEDEIEMSPQKKEEEQEFIEEVVRTKYFDMPPLTVSEAIDQLENVHHDFYAFRNE 257
Query: 217 ENGEVNVMYKRKRGGYGLIAPK 282
E GE+N++YKRK GGYGLI PK
Sbjct: 258 ETGEINIVYKRKEGGYGLIIPK 279
>gb|AAA34039.1| ribosomal protein 30S subunit [Spinacia oleracea]
Length = 302
Score = 84.7 bits (208), Expect = 2e-14
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
Frame = +1
Query: 19 TEVLDDSPLVSDEEDDIEDVN---ADKNTYNDG--TKIVKEKEFDMLPISTTEAAEHLVN 183
++V D P+ E+ +E+V A + +D ++V+ K FDM P++ TEA E L N
Sbjct: 188 SKVRDPEPVRITREEVLEEVESAPAPVSVEDDDFIEEVVRTKYFDMPPLTITEAVEQLEN 247
Query: 184 LGHDFYVFRNLENGEVNVMYKRKRGGYGLIAPKKPKSGK 300
+ HDFY FRN E G++N++YKRK GGYGLI PK K+ K
Sbjct: 248 VDHDFYAFRNEETGDINILYKRKEGGYGLIIPKDGKTEK 286
>sp|P19954.2|PRSP1_SPIOL RecName: Full=Ribosome-binding factor PSRP1, chloroplastic;
AltName: Full=30S ribosomal protein 1; AltName:
Full=CS-S5; Short=CS5; AltName: Full=Plastid-specific
30S ribosomal protein 1; Short=PSRP-1; AltName:
Full=Ribosomal protein 1; AltName: Full=S22; Flags:
Precursor gi|12316|emb|CAA41960.1| chloroplast ribosomal
protein S22 [Spinacia oleracea] gi|18031|emb|CAA33403.1|
spinach S22 r-protein [Spinacia oleracea]
Length = 302
Score = 84.7 bits (208), Expect = 2e-14
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
Frame = +1
Query: 19 TEVLDDSPLVSDEEDDIEDVN---ADKNTYNDG--TKIVKEKEFDMLPISTTEAAEHLVN 183
++V D P+ E+ +E+V A + +D ++V+ K FDM P++ TEA E L N
Sbjct: 188 SKVRDPEPVRITREEVLEEVESAPAPVSVEDDDFIEEVVRTKYFDMPPLTITEAVEQLEN 247
Query: 184 LGHDFYVFRNLENGEVNVMYKRKRGGYGLIAPKKPKSGK 300
+ HDFY FRN E G++N++YKRK GGYGLI PK K+ K
Sbjct: 248 VDHDFYAFRNEETGDINILYKRKEGGYGLIIPKDGKTEK 286
>ref|XP_003559644.1| PREDICTED: 30S ribosomal protein 1, chloroplastic-like
[Brachypodium distachyon]
Length = 290
Score = 83.6 bits (205), Expect = 5e-14
Identities = 37/78 (47%), Positives = 55/78 (70%)
Frame = +1
Query: 52 DEEDDIEDVNADKNTYNDGTKIVKEKEFDMLPISTTEAAEHLVNLGHDFYVFRNLENGEV 231
++ED++ +V ++ TK+V+ K F+M P++ EA E L N+ HDFY FRN + GEV
Sbjct: 195 EDEDELVEVIGAEDEETVLTKVVRTKVFEMAPLTVDEALEQLENVDHDFYAFRNEQTGEV 254
Query: 232 NVMYKRKRGGYGLIAPKK 285
N++YKRK GG+GLI PK+
Sbjct: 255 NILYKRKEGGFGLIIPKQ 272
>ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, chloroplast precursor,
putative [Ricinus communis] gi|223536311|gb|EEF37962.1|
Plastid-specific 30S ribosomal protein 1, chloroplast
precursor, putative [Ricinus communis]
Length = 311
Score = 83.6 bits (205), Expect = 5e-14
Identities = 40/81 (49%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Frame = +1
Query: 46 VSDEEDDIEDVNADKNT-YNDGTKIVKEKEFDMLPISTTEAAEHLVNLGHDFYVFRNLEN 222
V D+ D+++ V D++ Y D ++V+ K FDM P++ +EA E L N+ HDFY FRN E
Sbjct: 211 VKDDTDEVDGVLGDEDEDYID--EVVRTKYFDMPPLTVSEAIEQLKNVDHDFYGFRNEET 268
Query: 223 GEVNVMYKRKRGGYGLIAPKK 285
GE+N++YKRK GGYG+I PK+
Sbjct: 269 GEINIIYKRKAGGYGIIIPKE 289
>gb|ESW08430.1| hypothetical protein PHAVU_009G045100g [Phaseolus vulgaris]
Length = 330
Score = 83.2 bits (204), Expect = 6e-14
Identities = 42/90 (46%), Positives = 60/90 (66%)
Frame = +1
Query: 13 KLTEVLDDSPLVSDEEDDIEDVNADKNTYNDGTKIVKEKEFDMLPISTTEAAEHLVNLGH 192
K+ E ++ P+ +ED+I ++ + + +V+ K FDM P++ +EA E LVN+ H
Sbjct: 224 KVREPVEQLPV---QEDEILSPEEEEESIEE---VVRTKYFDMPPLTVSEAIEQLVNVDH 277
Query: 193 DFYVFRNLENGEVNVMYKRKRGGYGLIAPK 282
DFY FRN E GEVN++YKRK GGYGLI PK
Sbjct: 278 DFYGFRNEETGEVNIVYKRKEGGYGLIIPK 307
>gb|AGV54273.1| 30S ribosomal protein [Phaseolus vulgaris]
Length = 292
Score = 83.2 bits (204), Expect = 6e-14
Identities = 42/90 (46%), Positives = 60/90 (66%)
Frame = +1
Query: 13 KLTEVLDDSPLVSDEEDDIEDVNADKNTYNDGTKIVKEKEFDMLPISTTEAAEHLVNLGH 192
K+ E ++ P+ +ED+I ++ + + +V+ K FDM P++ +EA E LVN+ H
Sbjct: 186 KVREPVEQLPV---QEDEILSPEEEEESIEE---VVRTKYFDMPPLTVSEAIEQLVNVDH 239
Query: 193 DFYVFRNLENGEVNVMYKRKRGGYGLIAPK 282
DFY FRN E GEVN++YKRK GGYGLI PK
Sbjct: 240 DFYGFRNEETGEVNIVYKRKEGGYGLIIPK 269
>gb|EMJ19977.1| hypothetical protein PRUPE_ppa009612mg [Prunus persica]
Length = 285
Score = 83.2 bits (204), Expect = 6e-14
Identities = 43/92 (46%), Positives = 59/92 (64%)
Frame = +1
Query: 43 LVSDEEDDIEDVNADKNTYNDGTKIVKEKEFDMLPISTTEAAEHLVNLGHDFYVFRNLEN 222
+V +EE++ + + ND +IV+ K FDM P++ EA + L N+ HDFY FRN E
Sbjct: 185 VVEEEEEETVPQEEEGDFIND--EIVRMKYFDMPPLTVAEAVDQLENVDHDFYAFRNEET 242
Query: 223 GEVNVMYKRKRGGYGLIAPKKPKSGKE*KCRH 318
GE+N++YKRK GGYGLI PK +GK K H
Sbjct: 243 GEINIIYKRKEGGYGLIIPK--GNGKAEKSGH 272
>ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloroplastic-like [Vitis
vinifera]
Length = 298
Score = 82.8 bits (203), Expect = 8e-14
Identities = 42/84 (50%), Positives = 57/84 (67%)
Frame = +1
Query: 34 DSPLVSDEEDDIEDVNADKNTYNDGTKIVKEKEFDMLPISTTEAAEHLVNLGHDFYVFRN 213
++PLV +EE D+ D + N+ IV+ K FDM P++ EA E L N+ HDF+ FRN
Sbjct: 197 ETPLV-EEEADVVPQKEDGDLINE---IVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRN 252
Query: 214 LENGEVNVMYKRKRGGYGLIAPKK 285
E GE+N++YKRK GGYGLI PK+
Sbjct: 253 EETGEINILYKRKAGGYGLIIPKE 276
>emb|CBI23087.3| unnamed protein product [Vitis vinifera]
Length = 230
Score = 82.8 bits (203), Expect = 8e-14
Identities = 42/84 (50%), Positives = 57/84 (67%)
Frame = +1
Query: 34 DSPLVSDEEDDIEDVNADKNTYNDGTKIVKEKEFDMLPISTTEAAEHLVNLGHDFYVFRN 213
++PLV +EE D+ D + N+ IV+ K FDM P++ EA E L N+ HDF+ FRN
Sbjct: 129 ETPLV-EEEADVVPQKEDGDLINE---IVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRN 184
Query: 214 LENGEVNVMYKRKRGGYGLIAPKK 285
E GE+N++YKRK GGYGLI PK+
Sbjct: 185 EETGEINILYKRKAGGYGLIIPKE 208
>ref|XP_006493202.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic-like
[Citrus sinensis]
Length = 319
Score = 82.4 bits (202), Expect = 1e-13
Identities = 43/93 (46%), Positives = 59/93 (63%)
Frame = +1
Query: 4 RQPKLTEVLDDSPLVSDEEDDIEDVNADKNTYNDGTKIVKEKEFDMLPISTTEAAEHLVN 183
R+P V +D+ + S+EEDD N +IV+ K F+M P++ +EA E L N
Sbjct: 215 REPVTQVVENDADVQSEEEDD-----------NFVDEIVRMKFFEMPPLTVSEAIEQLEN 263
Query: 184 LGHDFYVFRNLENGEVNVMYKRKRGGYGLIAPK 282
+ HDFY FRN E GE+N++YKRK GGYG+I PK
Sbjct: 264 VDHDFYGFRNEETGEINIVYKRKAGGYGVIIPK 296