BLASTX nr result
ID: Ephedra27_contig00016635
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00016635
(1484 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004967186.1| PREDICTED: DNA-directed RNA polymerase I sub... 213 1e-52
ref|XP_002981487.1| hypothetical protein SELMODRAFT_233747 [Sela... 213 1e-52
ref|XP_002963596.1| hypothetical protein SELMODRAFT_438401 [Sela... 212 4e-52
emb|CBI29879.3| unnamed protein product [Vitis vinifera] 204 6e-50
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub... 204 6e-50
ref|XP_006656244.1| PREDICTED: DNA-directed RNA polymerase I sub... 202 4e-49
ref|XP_006850181.1| hypothetical protein AMTR_s00022p00245030 [A... 200 1e-48
dbj|BAD35511.1| putative RNA polymerase A(I) large subunit [Oryz... 199 2e-48
ref|NP_001058063.2| Os06g0612200 [Oryza sativa Japonica Group] g... 199 2e-48
ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me... 198 6e-48
ref|XP_002440175.1| hypothetical protein SORBIDRAFT_09g027230 [S... 197 7e-48
tpg|DAA45225.1| TPA: putative DNA-directed RNA polymerase family... 196 2e-47
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni... 196 2e-47
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub... 192 3e-46
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub... 192 4e-46
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 192 4e-46
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub... 192 4e-46
ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Popu... 191 5e-46
ref|XP_002308050.1| predicted protein [Populus trichocarpa] 191 5e-46
gb|ESW17626.1| hypothetical protein PHAVU_007G255400g [Phaseolus... 191 7e-46
>ref|XP_004967186.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Setaria
italica]
Length = 1682
Score = 213 bits (543), Expect = 1e-52
Identities = 107/192 (55%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
Frame = -2
Query: 994 YSVMENSHILLAPIAEKVANKVYVQSVTNIDKCAVIEIKEKKDNPPIPALQTNGINFEAF 815
Y+ + HILLA IA+K A ++V++ NIDKC E++EKK+ L+T+G+NFE F
Sbjct: 1486 YAFCDEPHILLAQIAQKTARSIFVRACKNIDKC---EVEEKKEKGSSAVLKTSGVNFEVF 1542
Query: 814 WKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFNSYGITVDRRHLSLIADFM 635
W L + IN++ TNDI+ +L+ YGVEAA ATI+ EV +VF YGI VD RHLS+IADFM
Sbjct: 1543 WNLRKYISINKITTNDIHAMLKTYGVEAARATIIEEVNHVFGVYGIKVDPRHLSMIADFM 1602
Query: 634 TFNGGYRPLNRIGIDS-STSPFLRISFETATKFLVDSCLQGETDYLASPSARIVLGQVAK 458
TF+GGYRP+NR+G+ STSPF +++FETATKF+VD+ GE+D L PSA I LG+ AK
Sbjct: 1603 TFDGGYRPMNRLGMGQFSTSPFGKMTFETATKFIVDAATHGESDSLECPSASICLGKPAK 1662
Query: 457 MGTGCFDILQNL 422
+GTG F +LQNL
Sbjct: 1663 VGTGTFGLLQNL 1674
>ref|XP_002981487.1| hypothetical protein SELMODRAFT_233747 [Selaginella moellendorffii]
gi|300150653|gb|EFJ17302.1| hypothetical protein
SELMODRAFT_233747 [Selaginella moellendorffii]
Length = 1578
Score = 213 bits (543), Expect = 1e-52
Identities = 120/245 (48%), Positives = 163/245 (66%), Gaps = 2/245 (0%)
Frame = -2
Query: 1144 QNTLAEEDSLVDEMSSRSMVTDLGXXXXXXXXXKNDSTVSVTSGRTLTWEYSVMENSHIL 965
+N +A+ D+ DE +V D K S+V GR+ ++ +NS L
Sbjct: 1337 ENDIADGDN--DEEKGGEVVDDEEEGHGKEKEGKKSSSVRAR-GRSYEMKFQANQNSPQL 1393
Query: 964 LAP-IAEKVANKVYVQSVTNIDKCAVIEIKEKKDNPPIPALQTNGINFEAFWKL-DNELD 791
P I EKV V V+ + NI+KC IE+ K +NP ALQT+G+NF W L D+ LD
Sbjct: 1394 FLPNIVEKVLKTVTVRRMKNIEKCNTIELNGKPENP---ALQTDGVNFWELWSLPDDVLD 1450
Query: 790 INRLMTNDINKVLEVYGVEAACATIVLEVQNVFNSYGITVDRRHLSLIADFMTFNGGYRP 611
+N+L +NDI +L YGVEAA ATIV EVQ VF SYGI+V+ RHLSLIADFMTF GGYRP
Sbjct: 1451 LNKLTSNDIAAMLNTYGVEAARATIVREVQGVFGSYGISVNARHLSLIADFMTFQGGYRP 1510
Query: 610 LNRIGIDSSTSPFLRISFETATKFLVDSCLQGETDYLASPSARIVLGQVAKMGTGCFDIL 431
LNR+GI S+ SPFL++SFETA++FL+D+ L+ + D L +PS+RI++G+ +GTGCFD+L
Sbjct: 1511 LNRVGIVSNPSPFLKMSFETASQFLIDASLRRQVDELDTPSSRIIVGRTVGLGTGCFDLL 1570
Query: 430 QNLEV 416
Q ++
Sbjct: 1571 QKTDM 1575
>ref|XP_002963596.1| hypothetical protein SELMODRAFT_438401 [Selaginella moellendorffii]
gi|300168864|gb|EFJ35467.1| hypothetical protein
SELMODRAFT_438401 [Selaginella moellendorffii]
Length = 1588
Score = 212 bits (539), Expect = 4e-52
Identities = 110/202 (54%), Positives = 147/202 (72%), Gaps = 2/202 (0%)
Frame = -2
Query: 1015 GRTLTWEYSVMENSHILLAP-IAEKVANKVYVQSVTNIDKCAVIEIKEKKDNPPIPALQT 839
GR+ ++ +NS L P I EKV V V+ + NI+KC IE+ K +NP ALQT
Sbjct: 1387 GRSYEMKFQANQNSPQLFLPNIVEKVLKTVTVRRMKNIEKCNAIELNGKPENP---ALQT 1443
Query: 838 NGINFEAFWKL-DNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFNSYGITVDRR 662
+G+NF W L D+ LD+N+L +NDI +L YGVEAA ATIV EVQ VF SYGI+V+ R
Sbjct: 1444 DGVNFWELWSLPDDVLDLNKLTSNDIAAMLNTYGVEAARATIVREVQGVFGSYGISVNAR 1503
Query: 661 HLSLIADFMTFNGGYRPLNRIGIDSSTSPFLRISFETATKFLVDSCLQGETDYLASPSAR 482
HLSLIADFMTF GGYRPLNR+GI S+ SPFL++SFETA++FL+D+ L+ + D L +PS+R
Sbjct: 1504 HLSLIADFMTFQGGYRPLNRVGIVSNPSPFLKMSFETASQFLIDASLRRQVDELDTPSSR 1563
Query: 481 IVLGQVAKMGTGCFDILQNLEV 416
I++G+ +GTGCFD+LQ ++
Sbjct: 1564 IIVGRTVGLGTGCFDLLQKTDM 1585
>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
Length = 1669
Score = 204 bits (520), Expect = 6e-50
Identities = 107/204 (52%), Positives = 144/204 (70%), Gaps = 18/204 (8%)
Frame = -2
Query: 973 HILLAPIAEKVANKVYVQSVTNIDKCAVIEIKE-----------KKDNPP------IPAL 845
HILLA IA+K ANKVY++S ID C VI+ + K++N P +PAL
Sbjct: 1466 HILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDPKKRENIPGEEKKKLPAL 1525
Query: 844 QTNGINFEAFWKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFNSYGITVDR 665
QT G++F AFWK+ +ELD+ + +N+++ +L +GVEAA ATI+ EV NVFN+YG+ V+
Sbjct: 1526 QTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNI 1585
Query: 664 RHLSLIADFMTFNGGYRPLNRI-GIDSSTSPFLRISFETATKFLVDSCLQGETDYLASPS 488
RHLSLIADFMT +GGYRP+NR GI S SPF +++FETA+KF+V++ G TD L S S
Sbjct: 1586 RHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNLESAS 1645
Query: 487 ARIVLGQVAKMGTGCFDILQNLEV 416
ARI LG KMGTGCFD++Q +E+
Sbjct: 1646 ARICLGLPVKMGTGCFDLMQKIEI 1669
>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
vinifera]
Length = 1740
Score = 204 bits (520), Expect = 6e-50
Identities = 107/204 (52%), Positives = 144/204 (70%), Gaps = 18/204 (8%)
Frame = -2
Query: 973 HILLAPIAEKVANKVYVQSVTNIDKCAVIEIKE-----------KKDNPP------IPAL 845
HILLA IA+K ANKVY++S ID C VI+ + K++N P +PAL
Sbjct: 1537 HILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDPKKRENIPGEEKKKLPAL 1596
Query: 844 QTNGINFEAFWKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFNSYGITVDR 665
QT G++F AFWK+ +ELD+ + +N+++ +L +GVEAA ATI+ EV NVFN+YG+ V+
Sbjct: 1597 QTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNI 1656
Query: 664 RHLSLIADFMTFNGGYRPLNRI-GIDSSTSPFLRISFETATKFLVDSCLQGETDYLASPS 488
RHLSLIADFMT +GGYRP+NR GI S SPF +++FETA+KF+V++ G TD L S S
Sbjct: 1657 RHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNLESAS 1716
Query: 487 ARIVLGQVAKMGTGCFDILQNLEV 416
ARI LG KMGTGCFD++Q +E+
Sbjct: 1717 ARICLGLPVKMGTGCFDLMQKIEI 1740
>ref|XP_006656244.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Oryza
brachyantha]
Length = 1755
Score = 202 bits (513), Expect = 4e-49
Identities = 107/202 (52%), Positives = 144/202 (71%), Gaps = 3/202 (1%)
Frame = -2
Query: 1021 TSGRTLTWEYSVMENSHILLAPIAEKVANKVYVQSVTNIDKCAV--IEIKEKKDNPPIPA 848
++G Y++ E HILLA IA++ A V++++ +NID+C V I++ K + I
Sbjct: 1546 STGLNFEVHYALQEQPHILLAQIAQRTARSVFIKACSNIDQCTVNKIDVDSDKIDEAI-V 1604
Query: 847 LQTNGINFEAFWKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFNSYGITVD 668
LQT G+NF FW L + LDIN + +NDI VL+ YGVEAA ATI+ EV VF +YGI V+
Sbjct: 1605 LQTVGVNFGVFWNLVDYLDINEVRSNDIYAVLKTYGVEAARATIIEEVSGVFGAYGIDVN 1664
Query: 667 RRHLSLIADFMTFNGGYRPLNRIGIDS-STSPFLRISFETATKFLVDSCLQGETDYLASP 491
+RHLSLIADFMTF+GGYRP++R G+ STSPF +++FETATKF+V++ GE+D L SP
Sbjct: 1665 KRHLSLIADFMTFDGGYRPMSRNGMGQFSTSPFGKMTFETATKFIVEAASHGESDTLDSP 1724
Query: 490 SARIVLGQVAKMGTGCFDILQN 425
SA I LG+ KMGTG F +LQN
Sbjct: 1725 SASICLGKPVKMGTGTFGLLQN 1746
>ref|XP_006850181.1| hypothetical protein AMTR_s00022p00245030 [Amborella trichopoda]
gi|548853779|gb|ERN11762.1| hypothetical protein
AMTR_s00022p00245030 [Amborella trichopoda]
Length = 1600
Score = 200 bits (509), Expect = 1e-48
Identities = 108/208 (51%), Positives = 144/208 (69%), Gaps = 4/208 (1%)
Frame = -2
Query: 1027 SVTSGRTLTWEYSVMENSHILLAPIAEKVANKVYVQSVTNIDKCAVIE---IKEKKDNPP 857
++ +G L + + LL+ AEKVAN YV+SV ID+C+V++ +++ K PP
Sbjct: 1394 TLDTGEDLEAPFIFPKGCPYLLSQAAEKVANDTYVRSVLGIDQCSVVDYQPVEDYKGEPP 1453
Query: 856 IP-ALQTNGINFEAFWKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFNSYG 680
A+QT G NF W + ++DI L++NDI+ +L+ YGVEAA ATI E+++VF SYG
Sbjct: 1454 SSVAIQTAGTNFLLMWTRE-DVDIKHLVSNDIHAMLKTYGVEAARATIKREIRSVFGSYG 1512
Query: 679 ITVDRRHLSLIADFMTFNGGYRPLNRIGIDSSTSPFLRISFETATKFLVDSCLQGETDYL 500
I V+ RHL LI+DFMT GG RP R GID +TSPFL+I++ETAT+F+VDS + G D L
Sbjct: 1513 IAVNSRHLDLISDFMTAGGGLRPFTRKGIDYNTSPFLKITYETATRFVVDSAIHGLEDAL 1572
Query: 499 ASPSARIVLGQVAKMGTGCFDILQNLEV 416
SPSARIVLGQV KMGTGC +LQNL V
Sbjct: 1573 ESPSARIVLGQVPKMGTGCISVLQNLVV 1600
>dbj|BAD35511.1| putative RNA polymerase A(I) large subunit [Oryza sativa Japonica
Group]
Length = 1748
Score = 199 bits (507), Expect = 2e-48
Identities = 106/206 (51%), Positives = 146/206 (70%), Gaps = 4/206 (1%)
Frame = -2
Query: 1021 TSGRTLTWEYSVMENSHILLAPIAEKVANKVYVQSVTNIDKCAVIEIKEKKDNP---PIP 851
++G Y++ E HILLA IA++ A V+V++ NID+C V + K+ +N PI
Sbjct: 1538 STGLNFEVHYALQEQPHILLAQIAQRTARSVFVKACKNIDRCEVNKPKKIDNNTINTPI- 1596
Query: 850 ALQTNGINFEAFWKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFNSYGITV 671
LQT G+NFE F KL + LDIN + +NDI+ +L YGVEAA ATI+ EV+ VF +YGI V
Sbjct: 1597 TLQTAGVNFEVFHKLVDYLDINEVRSNDIHAMLNTYGVEAARATIIGEVKGVFGAYGIHV 1656
Query: 670 DRRHLSLIADFMTFNGGYRPLNRIGIDS-STSPFLRISFETATKFLVDSCLQGETDYLAS 494
D RHL+LIADFMTF+GGYRP++R+G+ STSPF +++FETATKF+V++ GE+D L
Sbjct: 1657 DMRHLNLIADFMTFDGGYRPMSRLGMGQFSTSPFGKMTFETATKFIVEAASHGESDTLDG 1716
Query: 493 PSARIVLGQVAKMGTGCFDILQNLEV 416
PSA + LG+ K+GTG F +LQN +
Sbjct: 1717 PSASVCLGKPVKVGTGSFGLLQNFSL 1742
>ref|NP_001058063.2| Os06g0612200 [Oryza sativa Japonica Group]
gi|255677221|dbj|BAF19977.2| Os06g0612200 [Oryza sativa
Japonica Group]
Length = 237
Score = 199 bits (507), Expect = 2e-48
Identities = 106/206 (51%), Positives = 146/206 (70%), Gaps = 4/206 (1%)
Frame = -2
Query: 1021 TSGRTLTWEYSVMENSHILLAPIAEKVANKVYVQSVTNIDKCAVIEIKEKKDNP---PIP 851
++G Y++ E HILLA IA++ A V+V++ NID+C V + K+ +N PI
Sbjct: 27 STGLNFEVHYALQEQPHILLAQIAQRTARSVFVKACKNIDRCEVNKPKKIDNNTINTPI- 85
Query: 850 ALQTNGINFEAFWKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFNSYGITV 671
LQT G+NFE F KL + LDIN + +NDI+ +L YGVEAA ATI+ EV+ VF +YGI V
Sbjct: 86 TLQTAGVNFEVFHKLVDYLDINEVRSNDIHAMLNTYGVEAARATIIGEVKGVFGAYGIHV 145
Query: 670 DRRHLSLIADFMTFNGGYRPLNRIGIDS-STSPFLRISFETATKFLVDSCLQGETDYLAS 494
D RHL+LIADFMTF+GGYRP++R+G+ STSPF +++FETATKF+V++ GE+D L
Sbjct: 146 DMRHLNLIADFMTFDGGYRPMSRLGMGQFSTSPFGKMTFETATKFIVEAASHGESDTLDG 205
Query: 493 PSARIVLGQVAKMGTGCFDILQNLEV 416
PSA + LG+ K+GTG F +LQN +
Sbjct: 206 PSASVCLGKPVKVGTGSFGLLQNFSL 231
>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
subunit beta [Medicago truncatula]
Length = 1628
Score = 198 bits (503), Expect = 6e-48
Identities = 100/203 (49%), Positives = 140/203 (68%), Gaps = 17/203 (8%)
Frame = -2
Query: 973 HILLAPIAEKVANKVYVQSVTNIDKCAVIEIKE-----------KKDNPP------IPAL 845
HILLA IA++ A KV +Q+ + +C I KE K+D+ P IPAL
Sbjct: 1426 HILLAQIAQRTAEKVCIQNFGKVGQCKAITCKESGVIYYGEDDSKRDDIPSSVKEKIPAL 1485
Query: 844 QTNGINFEAFWKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFNSYGITVDR 665
QT+GI+F+ FW+++++L + + +ND++ +L+ YGVEAA I+ EVQNVF SYGI+V+
Sbjct: 1486 QTSGIHFKTFWEMEDDLKVRYVYSNDVHAILKAYGVEAAKEVIIREVQNVFKSYGISVNI 1545
Query: 664 RHLSLIADFMTFNGGYRPLNRIGIDSSTSPFLRISFETATKFLVDSCLQGETDYLASPSA 485
RHL LIADFMT +G YRPL R GI STSPF++IS+ETA+ F+V++ G+ D L +PS+
Sbjct: 1546 RHLMLIADFMTHSGSYRPLTRSGIADSTSPFVKISYETASNFIVEAARHGQVDTLETPSS 1605
Query: 484 RIVLGQVAKMGTGCFDILQNLEV 416
RI LG KMGTGC D++Q LE+
Sbjct: 1606 RICLGLPVKMGTGCIDLIQKLEI 1628
>ref|XP_002440175.1| hypothetical protein SORBIDRAFT_09g027230 [Sorghum bicolor]
gi|241945460|gb|EES18605.1| hypothetical protein
SORBIDRAFT_09g027230 [Sorghum bicolor]
Length = 311
Score = 197 bits (502), Expect = 7e-48
Identities = 99/194 (51%), Positives = 138/194 (71%), Gaps = 1/194 (0%)
Frame = -2
Query: 994 YSVMENSHILLAPIAEKVANKVYVQSVTNIDKCAVIEIKEKKDNPPIPALQTNGINFEAF 815
Y+ ++ HILLA IA+K+A ++V++ NID C ++ K + D+ I QT G+NFE
Sbjct: 117 YAFLDEPHILLAQIAKKIARTIFVKACNNIDDCKIV--KPRDDHARI---QTAGVNFEVV 171
Query: 814 WKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFNSYGITVDRRHLSLIADFM 635
W L+ + ++ + +NDI+ +L+ YGVEAA TI+ EV VF YGI VD RHLS+IADFM
Sbjct: 172 WNLNEYISVHDITSNDIHAILKTYGVEAARNTIINEVSGVFKPYGIDVDMRHLSMIADFM 231
Query: 634 TFNGGYRPLNRIGIDS-STSPFLRISFETATKFLVDSCLQGETDYLASPSARIVLGQVAK 458
T +GGYRP+NRIGI STSPF +++FETATKF+V++ GE D+L PSA + LG+ K
Sbjct: 232 TLDGGYRPMNRIGIGQFSTSPFGKMTFETATKFIVEAATHGEADFLECPSASVCLGKPPK 291
Query: 457 MGTGCFDILQNLEV 416
+GTG F +LQNLE+
Sbjct: 292 VGTGIFGLLQNLEL 305
>tpg|DAA45225.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
Length = 382
Score = 196 bits (498), Expect = 2e-47
Identities = 98/194 (50%), Positives = 132/194 (68%), Gaps = 1/194 (0%)
Frame = -2
Query: 994 YSVMENSHILLAPIAEKVANKVYVQSVTNIDKCAVIEIKEKKDNPPIPALQTNGINFEAF 815
Y+ + HILLA IA+K+A + V++ NID C +++ L+T G+NFE
Sbjct: 188 YAFHDEPHILLAQIAKKIARTILVKACNNIDHCKIVKPMHNHTR-----LETAGVNFEVV 242
Query: 814 WKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFNSYGITVDRRHLSLIADFM 635
W L + +N + +NDI+ +L+ YGVEAA TI+ EV VF YGI VD RHLSLIADFM
Sbjct: 243 WNLSEYISVNDITSNDIHAMLKTYGVEAARGTIIKEVSGVFEPYGINVDMRHLSLIADFM 302
Query: 634 TFNGGYRPLNRIGIDS-STSPFLRISFETATKFLVDSCLQGETDYLASPSARIVLGQVAK 458
T +GGYRP+NR+GI STSPF +++FETATKF+VD+ GE D+L PSA + LG+ K
Sbjct: 303 TLDGGYRPMNRLGIGQFSTSPFGKMTFETATKFIVDAATHGEADFLECPSASVCLGKPPK 362
Query: 457 MGTGCFDILQNLEV 416
+GTG F +LQNLE+
Sbjct: 363 VGTGIFGLLQNLEL 376
>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
polymerase I largest subunit, putative [Ricinus communis]
Length = 1686
Score = 196 bits (498), Expect = 2e-47
Identities = 102/204 (50%), Positives = 137/204 (67%), Gaps = 18/204 (8%)
Frame = -2
Query: 973 HILLAPIAEKVANKVYVQSVTNIDKCAVIEIKEKK------------DNPP-----IPAL 845
HILLA IA+K A KVY+Q+ I++C V + KE + D P +PAL
Sbjct: 1483 HILLAEIAQKTAKKVYIQNPGKIEQCRVTDCKESQVIYYGKDPKERVDLKPDVKEKVPAL 1542
Query: 844 QTNGINFEAFWKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFNSYGITVDR 665
G++F FWK+ + LD+ + +N+I+ +L+ YGVEAA TI+ E+ +VF SYGI V
Sbjct: 1543 HATGVDFNTFWKMQDHLDVRYIYSNNIHAMLKTYGVEAARETIIREINHVFKSYGIAVSN 1602
Query: 664 RHLSLIADFMTFNGGYRPLNRI-GIDSSTSPFLRISFETATKFLVDSCLQGETDYLASPS 488
RHLSLIADFMT GGYRP++R+ GI S SPF ++SFETA+KF+V++ L GE D L +PS
Sbjct: 1603 RHLSLIADFMTHTGGYRPMSRMGGIAESISPFSKMSFETASKFIVEAALHGEIDNLETPS 1662
Query: 487 ARIVLGQVAKMGTGCFDILQNLEV 416
ARI LG KMGTG FD++Q LE+
Sbjct: 1663 ARICLGLPVKMGTGSFDLMQKLEI 1686
>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
max]
Length = 1651
Score = 192 bits (488), Expect = 3e-46
Identities = 97/204 (47%), Positives = 135/204 (66%), Gaps = 18/204 (8%)
Frame = -2
Query: 973 HILLAPIAEKVANKVYVQSVTNIDKCAVIEIKEK-----------------KDNPPIPAL 845
HILL IA++ A KV +Q+ + +C I KE + IPAL
Sbjct: 1448 HILLTQIAQRTAKKVCIQNFGKVGECKAITCKESGVIYYGKDGRKRIEISASEKEQIPAL 1507
Query: 844 QTNGINFEAFWKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFNSYGITVDR 665
QT+G++F+ FW+L+++LD+ + +N+++ +L YGVEAA TI+ EVQNVF SYGI+V+
Sbjct: 1508 QTSGVHFKTFWELEDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVNI 1567
Query: 664 RHLSLIADFMTFNGGYRPLNRIG-IDSSTSPFLRISFETATKFLVDSCLQGETDYLASPS 488
RHL+LIADFMT G YRP+NR G I STSPF+++ FETA F+V++ G+ D L +PS
Sbjct: 1568 RHLTLIADFMTHTGSYRPMNRTGSIADSTSPFIKMCFETAGNFIVEAAYHGQVDNLETPS 1627
Query: 487 ARIVLGQVAKMGTGCFDILQNLEV 416
ARI LG KMGTGC D++Q LE+
Sbjct: 1628 ARICLGLPVKMGTGCHDLIQKLEI 1651
>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
sinensis]
Length = 1715
Score = 192 bits (487), Expect = 4e-46
Identities = 100/211 (47%), Positives = 139/211 (65%), Gaps = 18/211 (8%)
Frame = -2
Query: 994 YSVMENSHILLAPIAEKVANKVYVQSVTNIDKCAVIEIKEKK-----------------D 866
+ + +ILLA IA VA KVY+QS ID+C V KE + +
Sbjct: 1505 FKFINEPNILLAQIARHVAKKVYIQSSGKIDQCQVTNCKESQVIYYGKDPKTREDIKPEE 1564
Query: 865 NPPIPALQTNGINFEAFWKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFNS 686
+ AL T G++F AFW+L + +D+ + +N+I +LE YGVEAA TI+ E+++VF S
Sbjct: 1565 KEKVQALHTTGVDFHAFWRLQDFIDVRYIYSNNIQAMLETYGVEAARETIIREIKHVFGS 1624
Query: 685 YGITVDRRHLSLIADFMTFNGGYRPLNRI-GIDSSTSPFLRISFETATKFLVDSCLQGET 509
YGI+V+ RHLSLIADFMT +GGYRP++R+ GI S SPF +++FETA+KF+V++ G+
Sbjct: 1625 YGISVNTRHLSLIADFMTHSGGYRPMSRLGGIAESVSPFSKMTFETASKFIVEAASYGQV 1684
Query: 508 DYLASPSARIVLGQVAKMGTGCFDILQNLEV 416
D L +PSARI LG KMGTG FD++Q LEV
Sbjct: 1685 DKLDTPSARICLGLPVKMGTGSFDLMQKLEV 1715
>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
RPA1-like [Cucumis sativus]
Length = 1652
Score = 192 bits (487), Expect = 4e-46
Identities = 99/204 (48%), Positives = 140/204 (68%), Gaps = 18/204 (8%)
Frame = -2
Query: 973 HILLAPIAEKVANKVYVQSVTNIDKCAVI------------EIKEKKDNPP-----IPAL 845
H LL+ I ++ A KV +Q I +C I +KE+K+ P IPAL
Sbjct: 1449 HTLLSQIVQRAAQKVSIQRSGKIIQCQQITCKEGQVIYHGNNLKERKNLKPEEKEKIPAL 1508
Query: 844 QTNGINFEAFWKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFNSYGITVDR 665
QT+G++F+ W++ +ELD+ + +NDI+ +L+ YGVEAA ATI+ E+QN+F SYGI+V+
Sbjct: 1509 QTSGVDFKTLWEMQDELDVRYIYSNDIHAMLQTYGVEAARATIIREIQNIFTSYGISVNI 1568
Query: 664 RHLSLIADFMTFNGGYRPLNRI-GIDSSTSPFLRISFETATKFLVDSCLQGETDYLASPS 488
RHLSL+AD+MT +GGYRP++R+ GI S SPF R++FETA KF+V + L GE D L +PS
Sbjct: 1569 RHLSLVADYMTHSGGYRPMSRLGGISDSISPFSRMTFETAGKFIVQAALHGEVDNLETPS 1628
Query: 487 ARIVLGQVAKMGTGCFDILQNLEV 416
+RI LG KMGTG FD++Q +EV
Sbjct: 1629 SRICLGLPVKMGTGSFDLMQKIEV 1652
>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
sativus]
Length = 1650
Score = 192 bits (487), Expect = 4e-46
Identities = 99/204 (48%), Positives = 140/204 (68%), Gaps = 18/204 (8%)
Frame = -2
Query: 973 HILLAPIAEKVANKVYVQSVTNIDKCAVI------------EIKEKKDNPP-----IPAL 845
H LL+ I ++ A KV +Q I +C I +KE+K+ P IPAL
Sbjct: 1447 HTLLSQIVQRAAQKVSIQRSGKIIQCQQITCKEGQVIYHGNNLKERKNLKPEEKEKIPAL 1506
Query: 844 QTNGINFEAFWKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFNSYGITVDR 665
QT+G++F+ W++ +ELD+ + +NDI+ +L+ YGVEAA ATI+ E+QN+F SYGI+V+
Sbjct: 1507 QTSGVDFKTLWEMQDELDVRYIYSNDIHAMLQTYGVEAARATIIREIQNIFTSYGISVNI 1566
Query: 664 RHLSLIADFMTFNGGYRPLNRI-GIDSSTSPFLRISFETATKFLVDSCLQGETDYLASPS 488
RHLSL+AD+MT +GGYRP++R+ GI S SPF R++FETA KF+V + L GE D L +PS
Sbjct: 1567 RHLSLVADYMTHSGGYRPMSRLGGISDSISPFSRMTFETAGKFIVQAALHGEVDNLETPS 1626
Query: 487 ARIVLGQVAKMGTGCFDILQNLEV 416
+RI LG KMGTG FD++Q +EV
Sbjct: 1627 SRICLGLPVKMGTGSFDLMQKIEV 1650
>ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Populus trichocarpa]
gi|550335519|gb|ERP58815.1| hypothetical protein
POPTR_0006s05420g [Populus trichocarpa]
Length = 1132
Score = 191 bits (486), Expect = 5e-46
Identities = 98/204 (48%), Positives = 136/204 (66%), Gaps = 18/204 (8%)
Frame = -2
Query: 973 HILLAPIAEKVANKVYVQSVTNIDKCAVIEIKEKK-----------------DNPPIPAL 845
HILLA IA+K A KV +Q+ + +C V + KE + + IPAL
Sbjct: 929 HILLAEIAQKTAKKVCIQNPGKVQRCQVTDCKENQVIYYGKDPKRRIDIEPGEKQKIPAL 988
Query: 844 QTNGINFEAFWKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFNSYGITVDR 665
T G++F FWK+ + LD+ + +N I+ +L+ YGVEAA TI+ E+++VFNSYGI+V+
Sbjct: 989 HTIGVDFNTFWKMQDHLDVRYMYSNSIHGMLKAYGVEAARETIIREIKHVFNSYGISVNT 1048
Query: 664 RHLSLIADFMTFNGGYRPLNRI-GIDSSTSPFLRISFETATKFLVDSCLQGETDYLASPS 488
RHLSLIAD+MT G YRP++RI GI S SP ++SFETA+KF+V++ L GE D L +PS
Sbjct: 1049 RHLSLIADYMTHTGEYRPMSRIGGISESISPLSKMSFETASKFIVEAALHGEVDNLEAPS 1108
Query: 487 ARIVLGQVAKMGTGCFDILQNLEV 416
AR+ LG KMGTG FD++Q LE+
Sbjct: 1109 ARVCLGLPVKMGTGSFDLMQKLEI 1132
>ref|XP_002308050.1| predicted protein [Populus trichocarpa]
Length = 464
Score = 191 bits (486), Expect = 5e-46
Identities = 98/204 (48%), Positives = 136/204 (66%), Gaps = 18/204 (8%)
Frame = -2
Query: 973 HILLAPIAEKVANKVYVQSVTNIDKCAVIEIKEKK-----------------DNPPIPAL 845
HILLA IA+K A KV +Q+ + +C V + KE + + IPAL
Sbjct: 261 HILLAEIAQKTAKKVCIQNPGKVQRCQVTDCKENQVIYYGKDPKRRIDIEPGEKQKIPAL 320
Query: 844 QTNGINFEAFWKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFNSYGITVDR 665
T G++F FWK+ + LD+ + +N I+ +L+ YGVEAA TI+ E+++VFNSYGI+V+
Sbjct: 321 HTIGVDFNTFWKMQDHLDVRYMYSNSIHGMLKAYGVEAARETIIREIKHVFNSYGISVNT 380
Query: 664 RHLSLIADFMTFNGGYRPLNRI-GIDSSTSPFLRISFETATKFLVDSCLQGETDYLASPS 488
RHLSLIAD+MT G YRP++RI GI S SP ++SFETA+KF+V++ L GE D L +PS
Sbjct: 381 RHLSLIADYMTHTGEYRPMSRIGGISESISPLSKMSFETASKFIVEAALHGEVDNLEAPS 440
Query: 487 ARIVLGQVAKMGTGCFDILQNLEV 416
AR+ LG KMGTG FD++Q LE+
Sbjct: 441 ARVCLGLPVKMGTGSFDLMQKLEI 464
>gb|ESW17626.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
Length = 1637
Score = 191 bits (485), Expect = 7e-46
Identities = 99/203 (48%), Positives = 140/203 (68%), Gaps = 18/203 (8%)
Frame = -2
Query: 970 ILLAPIAEKVANKVYVQSVTNIDKCAVIEIKE-----------KKDNPP------IPALQ 842
ILLA IA + A KV +Q+ + +C + KE K+D+ P IPALQ
Sbjct: 1435 ILLAEIALRSAKKVCIQNSGRVGECKAVTCKESGVMYYGEDSRKRDDIPASVKEKIPALQ 1494
Query: 841 TNGINFEAFWKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFNSYGITVDRR 662
T+G++F+ FW+L ++LD+ + +N+++ +L YGVEAA TI+ EVQNVF SYGI+V+ R
Sbjct: 1495 TSGVHFKTFWELQDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVNIR 1554
Query: 661 HLSLIADFMTFNGGYRPLNRIG-IDSSTSPFLRISFETATKFLVDSCLQGETDYLASPSA 485
HL+LIADFMT +GGYRP+NR G I TSPF+++ FETA+KF+V++ G+ D L +PS+
Sbjct: 1555 HLTLIADFMTHSGGYRPMNRNGSIADCTSPFIKMCFETASKFIVEAAYHGQVDNLETPSS 1614
Query: 484 RIVLGQVAKMGTGCFDILQNLEV 416
RI LG KMGTGC D++Q LE+
Sbjct: 1615 RICLGLPVKMGTGCHDLIQKLEI 1637