BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00016524
         (1378 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006301115.1| hypothetical protein CARUB_v10021509mg [Caps...    65   5e-08

>ref|XP_006301115.1| hypothetical protein CARUB_v10021509mg [Capsella rubella]
           gi|482569825|gb|EOA34013.1| hypothetical protein
           CARUB_v10021509mg [Capsella rubella]
          Length = 841

 Score = 65.5 bits (158), Expect = 5e-08
 Identities = 63/246 (25%), Positives = 101/246 (41%), Gaps = 3/246 (1%)
 Frame = -2

Query: 792 KNLTQRQHADSKRVGGYGWAGGLLVISELRDRVIVLREALGLPXXXXXXXXXXXXXSTME 613
           KN + ++    K      W G  +++ ELR ++   R+ + LP              TM+
Sbjct: 74  KNASIKETKSPKTTSSPKWTGNFILMVELRRKIFTFRDIIDLPSLDGSPSITDMVMHTMK 133

Query: 612 ALHKLSPNKVPSTLLQETPDGDGKPIFQRLQRFYKTLQAMEDTFADTFSQKTNAPHEREK 433
            L KL P  + S+ + E    +   + + L  F+  L+++ D++ D        P    K
Sbjct: 134 DLQKLCPEIIHSSHISEIRRAN---VDKVLDHFFNALKSIGDSWIDN-------PEWIAK 183

Query: 432 ETPKPSSKPTTQRKSPIRN--ARIQRHKRKSSEDVNLEQLSERIINKLEELSENVKQSAE 259
                SS    Q    +    A +    + S E  ++ ++ +      EE  E+   S  
Sbjct: 184 SKYWSSSVGKNQSDRLVEKVLAALDGLIKMSKERFDMMEIDDE-----EEKKESASTSPR 238

Query: 258 TKRNSQSENRDTSDDSEASLSSFERSDSFKKCDSPLTPTSVLPERTQTSM-KPGIFINPF 82
           T + S S     S+    S SSF+  +SF  C SP+TP SVLPE    S  + G F N  
Sbjct: 239 TAKTSSSRALSPSESFSDSKSSFDSRNSF--CGSPITPRSVLPEPMMGSPGRAGDFANS- 295

Query: 81  MPPLLW 64
              LLW
Sbjct: 296 ASHLLW 301