BLASTX nr result
ID: Ephedra27_contig00016438
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00016438
(555 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB46745.1| Splicing factor U2AF 50 kDa subunit [Morus notabi... 194 9e-48
emb|CBI23686.3| unnamed protein product [Vitis vinifera] 183 3e-44
ref|XP_006293572.1| hypothetical protein CARUB_v10022519mg, part... 182 6e-44
gb|ABK96758.1| unknown [Populus trichocarpa x Populus deltoides] 180 2e-43
ref|XP_006489671.1| PREDICTED: splicing factor U2af large subuni... 179 4e-43
ref|XP_006420295.1| hypothetical protein CICLE_v10004248mg [Citr... 178 7e-43
ref|XP_006354457.1| PREDICTED: uncharacterized protein LOC102579... 178 9e-43
ref|XP_006354456.1| PREDICTED: uncharacterized protein LOC102579... 178 9e-43
ref|XP_004247752.1| PREDICTED: uncharacterized protein LOC101258... 177 2e-42
ref|XP_004296390.1| PREDICTED: splicing factor U2AF 50 kDa subun... 173 2e-41
ref|XP_006489672.1| PREDICTED: splicing factor U2af large subuni... 172 4e-41
ref|XP_006857448.1| hypothetical protein AMTR_s00067p00176230 [A... 172 4e-41
ref|XP_004985776.1| PREDICTED: uncharacterized protein LOC101753... 171 1e-40
gb|EEC74478.1| hypothetical protein OsI_09930 [Oryza sativa Indi... 169 4e-40
gb|ABF93875.1| RNA recognition motif family protein, expressed [... 166 3e-39
gb|ABF93874.1| RNA recognition motif family protein, expressed [... 166 3e-39
gb|ABF93876.1| RNA recognition motif family protein, expressed [... 166 3e-39
gb|ABF93877.1| RNA recognition motif family protein, expressed [... 166 3e-39
ref|XP_002465895.1| hypothetical protein SORBIDRAFT_01g047730 [S... 166 5e-39
ref|XP_006649367.1| PREDICTED: splicing factor U2af large subuni... 164 1e-38
>gb|EXB46745.1| Splicing factor U2AF 50 kDa subunit [Morus notabilis]
Length = 931
Score = 194 bits (494), Expect = 9e-48
Identities = 94/168 (55%), Positives = 124/168 (73%)
Frame = +3
Query: 42 DTIELTQSTRPSRRLYISNLPSSVTEEELIDFVNSSMLCTSSNYIPGTKPCISCVINMER 221
DT++LTQ+TRP RRLY+ N+PSS +E+ L+++ N L + N+I GT+PCISC+IN E+
Sbjct: 422 DTVQLTQATRPMRRLYVENIPSSTSEKALVEWFNDLFLSSRVNHIQGTQPCISCIINKEK 481
Query: 222 NQAFVEFITPVDATAALSLDGISFKGVDLKIKRPKDFVEPANGELEKGMPDADLISDVVK 401
+QA VEF+TP DA+AALS +G S G LKI+RPKDFVE A G+LEK D ISDVVK
Sbjct: 482 SQALVEFLTPEDASAALSFNGSSISGSVLKIRRPKDFVEVATGDLEKSTDAVDTISDVVK 541
Query: 402 DSPNKIFVSGFSYKLGSQKIKEIVAAFGQLKAFRMELNKDIKPPEVFV 545
DSPNKIF+ G S L S+ + EIV+AFG LKA+ E+N ++ P F+
Sbjct: 542 DSPNKIFIGGISKALSSKMLMEIVSAFGPLKAYHFEVNDELNDPCAFL 589
>emb|CBI23686.3| unnamed protein product [Vitis vinifera]
Length = 882
Score = 183 bits (464), Expect = 3e-44
Identities = 94/180 (52%), Positives = 128/180 (71%)
Frame = +3
Query: 6 VQPNNNQAVTLADTIELTQSTRPSRRLYISNLPSSVTEEELIDFVNSSMLCTSSNYIPGT 185
V N N ++ D+I+LTQ+TRP RRLY+ NLP S +E+ L++ +N+ +L + N++ GT
Sbjct: 382 VSKNKNVSI---DSIQLTQATRPMRRLYVENLPVSSSEKALMECLNNFLLSSGINHVQGT 438
Query: 186 KPCISCVINMERNQAFVEFITPVDATAALSLDGISFKGVDLKIKRPKDFVEPANGELEKG 365
PCISC+I+ E+ QA VEF+TP DA+AALS DGISF G LKI+RPKDFV+ G EK
Sbjct: 439 PPCISCIIHKEKGQALVEFLTPEDASAALSFDGISFSGSILKIRRPKDFVD-MTGVQEKL 497
Query: 366 MPDADLISDVVKDSPNKIFVSGFSYKLGSQKIKEIVAAFGQLKAFRMELNKDIKPPEVFV 545
+ D ISD+VKDSP+KIF+ G S L S + EI AAFG LKA+R ++N+D+ P F+
Sbjct: 498 VAAPDAISDIVKDSPHKIFIGGISRALSSDMLMEIAAAFGPLKAYRFQVNEDLGEPCAFL 557
>ref|XP_006293572.1| hypothetical protein CARUB_v10022519mg, partial [Capsella rubella]
gi|482562280|gb|EOA26470.1| hypothetical protein
CARUB_v10022519mg, partial [Capsella rubella]
Length = 1286
Score = 182 bits (461), Expect = 6e-44
Identities = 90/164 (54%), Positives = 118/164 (71%)
Frame = +3
Query: 33 TLADTIELTQSTRPSRRLYISNLPSSVTEEELIDFVNSSMLCTSSNYIPGTKPCISCVIN 212
T D+++LT+STR RRLY N+P S +E+ LI+ N ML + SN+I G++PCISC+IN
Sbjct: 825 TSFDSVQLTESTRRMRRLYAENVPDSASEKSLIECFNGYMLSSGSNHIKGSEPCISCIIN 884
Query: 213 MERNQAFVEFITPVDATAALSLDGISFKGVDLKIKRPKDFVEPANGELEKGMPDADLISD 392
E+NQA VEF+TP DA+AALSLDG SF G +LKI+RPKD+VE NG+LE P +SD
Sbjct: 885 KEKNQALVEFLTPQDASAALSLDGCSFAGSNLKIRRPKDYVEITNGDLENKEPATYAVSD 944
Query: 393 VVKDSPNKIFVSGFSYKLGSQKIKEIVAAFGQLKAFRMELNKDI 524
V+DS NKIFV GF + S+ + EIV+ FG LKA+R N D+
Sbjct: 945 NVEDSSNKIFVGGFPKAISSEMLMEIVSVFGPLKAYRFVSNNDL 988
>gb|ABK96758.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 787
Score = 180 bits (457), Expect = 2e-43
Identities = 88/171 (51%), Positives = 123/171 (71%)
Frame = +3
Query: 42 DTIELTQSTRPSRRLYISNLPSSVTEEELIDFVNSSMLCTSSNYIPGTKPCISCVINMER 221
++I+LTQ+T P RRLY+ N+P+S +E+ ++D +N+ ++ + ++I GT+PCISC+ E+
Sbjct: 283 ESIQLTQATHPIRRLYMENIPASASEKAVMDCLNNFLISSGVHHIQGTQPCISCIRQKEK 342
Query: 222 NQAFVEFITPVDATAALSLDGISFKGVDLKIKRPKDFVEPANGELEKGMPDADLISDVVK 401
QA VEF+TP DA+AALS DG SF G +K++RPKDF+E A GELEK D I D+VK
Sbjct: 343 GQALVEFLTPEDASAALSFDGRSFSGSIIKVRRPKDFIEVATGELEKSAAAIDAIGDIVK 402
Query: 402 DSPNKIFVSGFSYKLGSQKIKEIVAAFGQLKAFRMELNKDIKPPEVFVFLE 554
DSP+KIF+ G S L S+ + EI +AFG LKA++ E KD P E F FLE
Sbjct: 403 DSPHKIFIGGISKVLSSKMLMEIASAFGPLKAYQFENRKD--PDEPFAFLE 451
>ref|XP_006489671.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Citrus sinensis]
Length = 967
Score = 179 bits (454), Expect = 4e-43
Identities = 87/168 (51%), Positives = 119/168 (70%)
Frame = +3
Query: 42 DTIELTQSTRPSRRLYISNLPSSVTEEELIDFVNSSMLCTSSNYIPGTKPCISCVINMER 221
D+++LTQS RP RRL + NLP S +E+ L++F+N+ +L + ++ G+ PCI CVI E+
Sbjct: 452 DSVQLTQSNRPMRRLCVENLPVSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREK 511
Query: 222 NQAFVEFITPVDATAALSLDGISFKGVDLKIKRPKDFVEPANGELEKGMPDADLISDVVK 401
QAFVEF+T DA+AAL DG SF G LKIKRPK+FVE A+GE EK + D +S +VK
Sbjct: 512 GQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVK 571
Query: 402 DSPNKIFVSGFSYKLGSQKIKEIVAAFGQLKAFRMELNKDIKPPEVFV 545
DSP+KIF+ G S L S+ + EIV AFG LKA+ E+N+D + P F+
Sbjct: 572 DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPCAFI 619
>ref|XP_006420295.1| hypothetical protein CICLE_v10004248mg [Citrus clementina]
gi|557522168|gb|ESR33535.1| hypothetical protein
CICLE_v10004248mg [Citrus clementina]
Length = 967
Score = 178 bits (452), Expect = 7e-43
Identities = 87/168 (51%), Positives = 119/168 (70%)
Frame = +3
Query: 42 DTIELTQSTRPSRRLYISNLPSSVTEEELIDFVNSSMLCTSSNYIPGTKPCISCVINMER 221
D+++LTQS RP RRL + NLP S +E+ L++F+N+ +L + ++ G+ PCI CVI E+
Sbjct: 452 DSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREK 511
Query: 222 NQAFVEFITPVDATAALSLDGISFKGVDLKIKRPKDFVEPANGELEKGMPDADLISDVVK 401
QAFVEF+T DA+AAL DG SF G LKIKRPK+FVE A+GE EK + D +S +VK
Sbjct: 512 GQAFVEFLTAEDASAALCCDGRSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVK 571
Query: 402 DSPNKIFVSGFSYKLGSQKIKEIVAAFGQLKAFRMELNKDIKPPEVFV 545
DSP+KIF+ G S L S+ + EIV AFG LKA+ E+N+D + P F+
Sbjct: 572 DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPCAFI 619
>ref|XP_006354457.1| PREDICTED: uncharacterized protein LOC102579232 isoform X2 [Solanum
tuberosum]
Length = 1061
Score = 178 bits (451), Expect = 9e-43
Identities = 85/175 (48%), Positives = 123/175 (70%)
Frame = +3
Query: 21 NQAVTLADTIELTQSTRPSRRLYISNLPSSVTEEELIDFVNSSMLCTSSNYIPGTKPCIS 200
+ ++ D+++LTQ+TRP RRLY+ NLP+S +E+E++D++N+ ++ + N I GT+PCIS
Sbjct: 498 SSSIHAIDSVQLTQATRPMRRLYVENLPNSASEKEILDWINNFLMSSGVNRIQGTQPCIS 557
Query: 201 CVINMERNQAFVEFITPVDATAALSLDGISFKGVDLKIKRPKDFVEPANGELEKGMPDAD 380
C+I+ E+ QA +EF+TP DA+AA+S DG SF G LKI+RPKDFVE A G +K + AD
Sbjct: 558 CMIHKEKCQALLEFLTPEDASAAISFDGRSFSGSILKIRRPKDFVEVATGVPQKSVAAAD 617
Query: 381 LISDVVKDSPNKIFVSGFSYKLGSQKIKEIVAAFGQLKAFRMELNKDIKPPEVFV 545
I D V+DS KIFV G S + S+ + EI AFG LKA+ +N D+ P F+
Sbjct: 618 RIDDTVEDSSYKIFVGGISRTISSEMLMEIAKAFGPLKAYHFRMNSDLNEPCAFL 672
>ref|XP_006354456.1| PREDICTED: uncharacterized protein LOC102579232 isoform X1 [Solanum
tuberosum]
Length = 1105
Score = 178 bits (451), Expect = 9e-43
Identities = 85/175 (48%), Positives = 123/175 (70%)
Frame = +3
Query: 21 NQAVTLADTIELTQSTRPSRRLYISNLPSSVTEEELIDFVNSSMLCTSSNYIPGTKPCIS 200
+ ++ D+++LTQ+TRP RRLY+ NLP+S +E+E++D++N+ ++ + N I GT+PCIS
Sbjct: 542 SSSIHAIDSVQLTQATRPMRRLYVENLPNSASEKEILDWINNFLMSSGVNRIQGTQPCIS 601
Query: 201 CVINMERNQAFVEFITPVDATAALSLDGISFKGVDLKIKRPKDFVEPANGELEKGMPDAD 380
C+I+ E+ QA +EF+TP DA+AA+S DG SF G LKI+RPKDFVE A G +K + AD
Sbjct: 602 CMIHKEKCQALLEFLTPEDASAAISFDGRSFSGSILKIRRPKDFVEVATGVPQKSVAAAD 661
Query: 381 LISDVVKDSPNKIFVSGFSYKLGSQKIKEIVAAFGQLKAFRMELNKDIKPPEVFV 545
I D V+DS KIFV G S + S+ + EI AFG LKA+ +N D+ P F+
Sbjct: 662 RIDDTVEDSSYKIFVGGISRTISSEMLMEIAKAFGPLKAYHFRMNSDLNEPCAFL 716
>ref|XP_004247752.1| PREDICTED: uncharacterized protein LOC101258490 [Solanum
lycopersicum]
Length = 903
Score = 177 bits (448), Expect = 2e-42
Identities = 86/173 (49%), Positives = 122/173 (70%)
Frame = +3
Query: 27 AVTLADTIELTQSTRPSRRLYISNLPSSVTEEELIDFVNSSMLCTSSNYIPGTKPCISCV 206
+V D+++LTQ+TRP RRLY+ NLP+S +E+E++D++N+ ++ + N I GT+PCISC+
Sbjct: 334 SVHAIDSVQLTQATRPMRRLYVENLPNSASEKEILDWINNFLMSSGVNRIQGTQPCISCM 393
Query: 207 INMERNQAFVEFITPVDATAALSLDGISFKGVDLKIKRPKDFVEPANGELEKGMPDADLI 386
I+ E+ QA +EF+TP DA+AALS DG SF G LKI+RPKDFVE A G +K + AD I
Sbjct: 394 IHKEKCQALLEFLTPEDASAALSFDGRSFSGSILKIRRPKDFVEVATGVPQKSVAAADRI 453
Query: 387 SDVVKDSPNKIFVSGFSYKLGSQKIKEIVAAFGQLKAFRMELNKDIKPPEVFV 545
+ V+DS KIFV G S + S+ + EI AFG LKA+ +N D+ P F+
Sbjct: 454 DNTVEDSSYKIFVGGISRTISSEMLMEIAKAFGPLKAYHFRMNSDLNEPCAFL 506
>ref|XP_004296390.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Fragaria vesca
subsp. vesca]
Length = 542
Score = 173 bits (439), Expect = 2e-41
Identities = 88/173 (50%), Positives = 122/173 (70%), Gaps = 5/173 (2%)
Frame = +3
Query: 42 DTIELTQSTRPSRRLYISNLPSSVTEEELIDFVNSSMLCTSSNYIPGTKPCISCVINMER 221
D+++LTQ+TR RRL++ N+PS+ +E L++ +N+ +L + N+I GT+PCISCVIN E+
Sbjct: 32 DSVQLTQATRRMRRLHVENIPSTTSESTLVESLNNFLLSSGVNHIQGTRPCISCVINKEK 91
Query: 222 NQAFVEFITPVDATAALSLDGISFKGVDLKIKRPKDFVEPANG--ELEKGMPDAD---LI 386
QA VEF+TP DA AAL+ DG SF G LKI+RPKDF++ A G + EK + AD I
Sbjct: 92 GQALVEFLTPEDALAALAFDGTSFFGSILKIRRPKDFIDVATGDHDPEKSVAAADGIVTI 151
Query: 387 SDVVKDSPNKIFVSGFSYKLGSQKIKEIVAAFGQLKAFRMELNKDIKPPEVFV 545
SDVV DSPNKIF+ G S L S+ + EIV+ FG LKA+ E N+++ P F+
Sbjct: 152 SDVVNDSPNKIFIGGISKVLSSEMLLEIVSVFGPLKAYHFEANEELTEPYAFL 204
>ref|XP_006489672.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Citrus sinensis]
Length = 965
Score = 172 bits (437), Expect = 4e-41
Identities = 86/168 (51%), Positives = 118/168 (70%)
Frame = +3
Query: 42 DTIELTQSTRPSRRLYISNLPSSVTEEELIDFVNSSMLCTSSNYIPGTKPCISCVINMER 221
D+++LTQS RP RRL + NLP S +E+ L++F+N+ +L + ++ G+ PCI CV E+
Sbjct: 452 DSVQLTQSNRPMRRLCVENLPVSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCV--REK 509
Query: 222 NQAFVEFITPVDATAALSLDGISFKGVDLKIKRPKDFVEPANGELEKGMPDADLISDVVK 401
QAFVEF+T DA+AAL DG SF G LKIKRPK+FVE A+GE EK + D +S +VK
Sbjct: 510 GQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVK 569
Query: 402 DSPNKIFVSGFSYKLGSQKIKEIVAAFGQLKAFRMELNKDIKPPEVFV 545
DSP+KIF+ G S L S+ + EIV AFG LKA+ E+N+D + P F+
Sbjct: 570 DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPCAFI 617
>ref|XP_006857448.1| hypothetical protein AMTR_s00067p00176230 [Amborella trichopoda]
gi|548861541|gb|ERN18915.1| hypothetical protein
AMTR_s00067p00176230 [Amborella trichopoda]
Length = 928
Score = 172 bits (437), Expect = 4e-41
Identities = 80/160 (50%), Positives = 117/160 (73%)
Frame = +3
Query: 42 DTIELTQSTRPSRRLYISNLPSSVTEEELIDFVNSSMLCTSSNYIPGTKPCISCVINMER 221
D+++LTQ+TRPSRRLY+ N+P+S ++E +++ +N+ +L + + I GT PCISC+IN E+
Sbjct: 410 DSVQLTQATRPSRRLYLENIPASASDESVVECLNNFLLSSGAIRIKGTHPCISCLINKEK 469
Query: 222 NQAFVEFITPVDATAALSLDGISFKGVDLKIKRPKDFVEPANGELEKGMPDADLISDVVK 401
QA VEF+TP +ATAAL+ DG S G +KI+RPKDF+E EK + D +SD+VK
Sbjct: 470 GQALVEFLTPENATAALAFDGKSISGSIVKIRRPKDFIETPAVATEKPVATVDAVSDIVK 529
Query: 402 DSPNKIFVSGFSYKLGSQKIKEIVAAFGQLKAFRMELNKD 521
DSP+KIF+ G L S K++EIV+ FG LKA+ E+N++
Sbjct: 530 DSPHKIFIGGIPKSLSSDKLQEIVSVFGHLKAYHFEVNRE 569
>ref|XP_004985776.1| PREDICTED: uncharacterized protein LOC101753519 [Setaria italica]
Length = 973
Score = 171 bits (433), Expect = 1e-40
Identities = 86/169 (50%), Positives = 115/169 (68%)
Frame = +3
Query: 39 ADTIELTQSTRPSRRLYISNLPSSVTEEELIDFVNSSMLCTSSNYIPGTKPCISCVINME 218
AD+++LTQ+TRP RRL+I NLP S TE+ LID +N +L T Y +KPC+SC IN E
Sbjct: 455 ADSVQLTQATRPLRRLHIENLPDSATEDRLIDCLNDFLLSTGVKYTQRSKPCLSCTINKE 514
Query: 219 RNQAFVEFITPVDATAALSLDGISFKGVDLKIKRPKDFVEPANGELEKGMPDADLISDVV 398
+ QAF EF+TP DATAALS DG S G L+I+RPK++VE N +K + LISDVV
Sbjct: 515 KRQAFAEFLTPEDATAALSFDGRSLNGSALRIRRPKEYVEMVNVAPKKPAEETGLISDVV 574
Query: 399 KDSPNKIFVSGFSYKLGSQKIKEIVAAFGQLKAFRMELNKDIKPPEVFV 545
DSP KIF++G + + S+ + EIV+AFG L A+R N ++ P F+
Sbjct: 575 ADSPYKIFIAGIAGMISSEMLMEIVSAFGPLAAYRFLFNDELGGPCAFL 623
>gb|EEC74478.1| hypothetical protein OsI_09930 [Oryza sativa Indica Group]
Length = 1128
Score = 169 bits (428), Expect = 4e-40
Identities = 90/175 (51%), Positives = 126/175 (72%), Gaps = 1/175 (0%)
Frame = +3
Query: 3 TVQPNNNQAVTLADTIELTQSTRPSRRLYISNLPSSVTEEELIDFVNSSMLCTSSNYIPG 182
T+ +N AV D+++LTQ+TRP RRL+I NLPS TE+ LI +N +L +S+++I
Sbjct: 616 TILTGSNLAV---DSVQLTQATRPLRRLHIENLPSLATEDMLIGCLNEFLLSSSASHIQR 672
Query: 183 TK-PCISCVINMERNQAFVEFITPVDATAALSLDGISFKGVDLKIKRPKDFVEPANGELE 359
+K PC+SCVIN ++ QAFVEF+TP DATAALS DG SF G LKI+RPK++VE A+ +
Sbjct: 673 SKQPCLSCVINKDKRQAFVEFLTPEDATAALSFDGRSFGGSSLKIRRPKEYVEMAHVAPK 732
Query: 360 KGMPDADLISDVVKDSPNKIFVSGFSYKLGSQKIKEIVAAFGQLKAFRMELNKDI 524
K + LISDVV DSP+KIF++G S + S+ + EIV++FG L A+R N+D+
Sbjct: 733 KPSEEIKLISDVVADSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYRFLFNEDL 787
>gb|ABF93875.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 964
Score = 166 bits (420), Expect = 3e-39
Identities = 89/173 (51%), Positives = 124/173 (71%), Gaps = 1/173 (0%)
Frame = +3
Query: 3 TVQPNNNQAVTLADTIELTQSTRPSRRLYISNLPSSVTEEELIDFVNSSMLCTSSNYIPG 182
T+ +N AV D+++LTQ+TRP RRL+I NLPS TE+ LI +N +L +S+++I
Sbjct: 452 TILTGSNLAV---DSVQLTQATRPLRRLHIENLPSLATEDMLIGCLNEFLLSSSASHIQR 508
Query: 183 TK-PCISCVINMERNQAFVEFITPVDATAALSLDGISFKGVDLKIKRPKDFVEPANGELE 359
+K PC+SCVIN ++ QAFVEF+TP DATAALS DG SF G LKI+RPK++VE A+ +
Sbjct: 509 SKQPCLSCVINKDKRQAFVEFLTPEDATAALSFDGRSFGGSSLKIRRPKEYVEMAHVAPK 568
Query: 360 KGMPDADLISDVVKDSPNKIFVSGFSYKLGSQKIKEIVAAFGQLKAFRMELNK 518
K + LISDVV DSP+KIF++G S + S+ + EIV++FG L A+R N+
Sbjct: 569 KPSEEIKLISDVVADSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYRFLFNE 621
>gb|ABF93874.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 964
Score = 166 bits (420), Expect = 3e-39
Identities = 89/173 (51%), Positives = 124/173 (71%), Gaps = 1/173 (0%)
Frame = +3
Query: 3 TVQPNNNQAVTLADTIELTQSTRPSRRLYISNLPSSVTEEELIDFVNSSMLCTSSNYIPG 182
T+ +N AV D+++LTQ+TRP RRL+I NLPS TE+ LI +N +L +S+++I
Sbjct: 452 TILTGSNLAV---DSVQLTQATRPLRRLHIENLPSLATEDMLIGCLNEFLLSSSASHIQR 508
Query: 183 TK-PCISCVINMERNQAFVEFITPVDATAALSLDGISFKGVDLKIKRPKDFVEPANGELE 359
+K PC+SCVIN ++ QAFVEF+TP DATAALS DG SF G LKI+RPK++VE A+ +
Sbjct: 509 SKQPCLSCVINKDKRQAFVEFLTPEDATAALSFDGRSFGGSSLKIRRPKEYVEMAHVAPK 568
Query: 360 KGMPDADLISDVVKDSPNKIFVSGFSYKLGSQKIKEIVAAFGQLKAFRMELNK 518
K + LISDVV DSP+KIF++G S + S+ + EIV++FG L A+R N+
Sbjct: 569 KPSEEIKLISDVVADSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYRFLFNE 621
>gb|ABF93876.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 704
Score = 166 bits (420), Expect = 3e-39
Identities = 89/173 (51%), Positives = 124/173 (71%), Gaps = 1/173 (0%)
Frame = +3
Query: 3 TVQPNNNQAVTLADTIELTQSTRPSRRLYISNLPSSVTEEELIDFVNSSMLCTSSNYIPG 182
T+ +N AV D+++LTQ+TRP RRL+I NLPS TE+ LI +N +L +S+++I
Sbjct: 452 TILTGSNLAV---DSVQLTQATRPLRRLHIENLPSLATEDMLIGCLNEFLLSSSASHIQR 508
Query: 183 TK-PCISCVINMERNQAFVEFITPVDATAALSLDGISFKGVDLKIKRPKDFVEPANGELE 359
+K PC+SCVIN ++ QAFVEF+TP DATAALS DG SF G LKI+RPK++VE A+ +
Sbjct: 509 SKQPCLSCVINKDKRQAFVEFLTPEDATAALSFDGRSFGGSSLKIRRPKEYVEMAHVAPK 568
Query: 360 KGMPDADLISDVVKDSPNKIFVSGFSYKLGSQKIKEIVAAFGQLKAFRMELNK 518
K + LISDVV DSP+KIF++G S + S+ + EIV++FG L A+R N+
Sbjct: 569 KPSEEIKLISDVVADSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYRFLFNE 621
>gb|ABF93877.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 720
Score = 166 bits (420), Expect = 3e-39
Identities = 89/173 (51%), Positives = 124/173 (71%), Gaps = 1/173 (0%)
Frame = +3
Query: 3 TVQPNNNQAVTLADTIELTQSTRPSRRLYISNLPSSVTEEELIDFVNSSMLCTSSNYIPG 182
T+ +N AV D+++LTQ+TRP RRL+I NLPS TE+ LI +N +L +S+++I
Sbjct: 452 TILTGSNLAV---DSVQLTQATRPLRRLHIENLPSLATEDMLIGCLNEFLLSSSASHIQR 508
Query: 183 TK-PCISCVINMERNQAFVEFITPVDATAALSLDGISFKGVDLKIKRPKDFVEPANGELE 359
+K PC+SCVIN ++ QAFVEF+TP DATAALS DG SF G LKI+RPK++VE A+ +
Sbjct: 509 SKQPCLSCVINKDKRQAFVEFLTPEDATAALSFDGRSFGGSSLKIRRPKEYVEMAHVAPK 568
Query: 360 KGMPDADLISDVVKDSPNKIFVSGFSYKLGSQKIKEIVAAFGQLKAFRMELNK 518
K + LISDVV DSP+KIF++G S + S+ + EIV++FG L A+R N+
Sbjct: 569 KPSEEIKLISDVVADSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYRFLFNE 621
>ref|XP_002465895.1| hypothetical protein SORBIDRAFT_01g047730 [Sorghum bicolor]
gi|241919749|gb|EER92893.1| hypothetical protein
SORBIDRAFT_01g047730 [Sorghum bicolor]
Length = 969
Score = 166 bits (419), Expect = 5e-39
Identities = 86/169 (50%), Positives = 117/169 (69%)
Frame = +3
Query: 39 ADTIELTQSTRPSRRLYISNLPSSVTEEELIDFVNSSMLCTSSNYIPGTKPCISCVINME 218
AD+++LTQ+TRP RRL+I NLP S TE++LID +N +L T +KPC+SC IN E
Sbjct: 460 ADSVQLTQATRPLRRLHIENLPDSATEDKLIDCLNDFLLPTGIKP-QRSKPCLSCTINRE 518
Query: 219 RNQAFVEFITPVDATAALSLDGISFKGVDLKIKRPKDFVEPANGELEKGMPDADLISDVV 398
+ QAFVEF+TP DATAALS DG S G L+I+RPK++VE N +K + LISDVV
Sbjct: 519 KRQAFVEFLTPEDATAALSFDGRSLNGSTLRIRRPKEYVETVNVTPKKPAEETALISDVV 578
Query: 399 KDSPNKIFVSGFSYKLGSQKIKEIVAAFGQLKAFRMELNKDIKPPEVFV 545
DSP+KIF++G + + S+ + EIV+AFG L A+R N ++ P F+
Sbjct: 579 ADSPHKIFIAGIAGVISSEMLMEIVSAFGPLAAYRFLFNSELGGPCAFL 627
>ref|XP_006649367.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Oryza brachyantha] gi|573923585|ref|XP_006649368.1|
PREDICTED: splicing factor U2af large subunit B-like
isoform X2 [Oryza brachyantha]
gi|573923587|ref|XP_006649369.1| PREDICTED: splicing
factor U2af large subunit B-like isoform X3 [Oryza
brachyantha]
Length = 957
Score = 164 bits (416), Expect = 1e-38
Identities = 85/162 (52%), Positives = 117/162 (72%), Gaps = 1/162 (0%)
Frame = +3
Query: 42 DTIELTQSTRPSRRLYISNLPSSVTEEELIDFVNSSMLCTSSNYIPGTK-PCISCVINME 218
D+++LTQ+TRP RRL+I NLPSS TE+ LI +N +L +S ++I +K PC SCVIN +
Sbjct: 462 DSVQLTQATRPLRRLHIENLPSSATEDMLIGCLNEFLLSSSVSHIQRSKQPCFSCVINKD 521
Query: 219 RNQAFVEFITPVDATAALSLDGISFKGVDLKIKRPKDFVEPANGELEKGMPDADLISDVV 398
+ QAFVEF+TP DATAALS DG SF G LKI+RPK++VE + +K + LIS+VV
Sbjct: 522 KRQAFVEFLTPEDATAALSFDGRSFNGSSLKIRRPKEYVELTHIAPKKPSTEIKLISNVV 581
Query: 399 KDSPNKIFVSGFSYKLGSQKIKEIVAAFGQLKAFRMELNKDI 524
DSP+KIF+SG S + S+ + EI ++FG L A+R N+D+
Sbjct: 582 ADSPHKIFISGISRVISSEMLMEIASSFGPLAAYRFLFNEDL 623