BLASTX nr result
ID: Ephedra27_contig00016276
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00016276
(676 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004295338.1| PREDICTED: pentatricopeptide repeat-containi... 152 9e-35
gb|ABR17838.1| unknown [Picea sitchensis] 152 1e-34
ref|XP_006412272.1| hypothetical protein EUTSA_v10027054mg [Eutr... 151 2e-34
ref|NP_172596.1| pentatricopeptide repeat-containing protein [Ar... 150 4e-34
ref|XP_006304494.1| hypothetical protein CARUB_v10011264mg [Caps... 147 3e-33
gb|EMJ15418.1| hypothetical protein PRUPE_ppa023254mg [Prunus pe... 147 3e-33
ref|XP_006296670.1| hypothetical protein CARUB_v10016279mg [Caps... 145 1e-32
ref|XP_002885623.1| pentatricopeptide repeat-containing protein ... 144 2e-32
gb|EOY29048.1| Tetratricopeptide repeat-like superfamily protein... 143 4e-32
sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-c... 142 7e-32
ref|NP_189042.4| pentatricopeptide repeat-containing protein [Ar... 142 7e-32
ref|XP_006833353.1| hypothetical protein AMTR_s00109p00094190 [A... 142 9e-32
ref|XP_004965888.1| PREDICTED: putative pentatricopeptide repeat... 142 9e-32
ref|XP_004292817.1| PREDICTED: pentatricopeptide repeat-containi... 141 2e-31
ref|XP_002514406.1| pentatricopeptide repeat-containing protein,... 141 2e-31
ref|XP_006848704.1| hypothetical protein AMTR_s00177p00028500 [A... 140 4e-31
ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containi... 140 4e-31
ref|XP_003518395.2| PREDICTED: pentatricopeptide repeat-containi... 140 5e-31
ref|XP_006367240.1| PREDICTED: pentatricopeptide repeat-containi... 139 8e-31
emb|CAJ19324.1| selenium binding protein [Triticum aestivum] 139 8e-31
>ref|XP_004295338.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 650
Score = 152 bits (384), Expect = 9e-35
Identities = 75/211 (35%), Positives = 123/211 (58%), Gaps = 7/211 (3%)
Frame = -2
Query: 615 KHSVTPQEFLAQNLEKTSHLNT-------KQLHSYLLKSALYSDVYSATRLISSYCKNGF 457
+H + P +F +L K + +QLH+Y K S+VY T L+ Y + G
Sbjct: 168 RHGLVPNQFTLSSLLKAAGAGPDPDDRHGRQLHAYCFKCGFDSNVYVGTSLVDMYARCGL 227
Query: 456 MEDACKVFDEMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKSMLAEGFPPNYLTLNGVLQA 277
M+D+ +FD + K+ V+W A+IAG + + +L+ F +ML GF P + T + V
Sbjct: 228 MDDSQIIFDALRTKNEVSWNALIAGHARKGQGEHALRLFWNMLRGGFKPTHFTYSSVFTV 287
Query: 276 CIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRNVATW 97
C + S QG VHS+ +KSG++ FV N L++MYAKSGS+E+A K+FD+++ R+V +W
Sbjct: 288 CASAGSMEQGKWVHSHMIKSGVNLVAFVGNTLLDMYAKSGSIEDARKVFDRLVKRDVVSW 347
Query: 96 TSIISAHVQNNLGEEAISMFNLMRKSGITCN 4
S+++ + Q+ LG E + +F M + G+ N
Sbjct: 348 NSMLTGYAQHGLGTETVQLFEEMLRIGVQPN 378
Score = 127 bits (319), Expect = 3e-27
Identities = 63/178 (35%), Positives = 106/178 (59%), Gaps = 2/178 (1%)
Frame = -2
Query: 543 LHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRN 364
+H+++L S +D+ L+++Y K G ++ A +FDEMP++D VTWT++I+G+S
Sbjct: 96 VHAHMLTSQFNNDLPILNTLLNTYVKCGSLDHAHHLFDEMPHRDLVTWTSLISGYSQLDR 155
Query: 363 PQRSLQTFKSMLAEGFPPNYLTLNGVLQACIA--LNSGSQGTQVHSYALKSGLDSDCFVS 190
P+ SL F ML G PN TL+ +L+A A G Q+H+Y K G DS+ +V
Sbjct: 156 PRESLVLFPHMLRHGLVPNQFTLSSLLKAAGAGPDPDDRHGRQLHAYCFKCGFDSNVYVG 215
Query: 189 NVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSG 16
LV+MYA+ G ++++ +FD + +N +W ++I+ H + GE A+ +F M + G
Sbjct: 216 TSLVDMYARCGLMDDSQIIFDALRTKNEVSWNALIAGHARKGQGEHALRLFWNMLRGG 273
Score = 78.2 bits (191), Expect = 2e-12
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 3/166 (1%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSN 370
K +HS+++KS + + L+ Y K+G +EDA KVFD + +D V+W +M+ G++ +
Sbjct: 298 KWVHSHMIKSGVNLVAFVGNTLLDMYAKSGSIEDARKVFDRLVKRDVVSWNSMLTGYAQH 357
Query: 369 RNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGT-QVHSYALKSGLDSDCFV 193
++Q F+ ML G PN ++ VL AC + +G H K ++ F
Sbjct: 358 GLGTETVQLFEEMLRIGVQPNDISFLCVLTACSHSHLLDEGQYYFHLMRKKFKIEPQVFH 417
Query: 192 SNVLVEMYAKSGSLENACKLFDKMLVR-NVATWTSIISA-HVQNNL 61
+V++ ++G L+ A K +M A W +++ A + NN+
Sbjct: 418 YVTMVDLLGRAGLLDRADKFIREMPTEPTAAVWGALLGACRMHNNI 463
Score = 63.9 bits (154), Expect = 4e-08
Identities = 34/95 (35%), Positives = 54/95 (56%)
Frame = -2
Query: 288 VLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRN 109
+L C Q T VH++ L S ++D + N L+ Y K GSL++A LFD+M R+
Sbjct: 80 LLNKCSQTGQLKQATIVHAHMLTSQFNNDLPILNTLLNTYVKCGSLDHAHHLFDEMPHRD 139
Query: 108 VATWTSIISAHVQNNLGEEAISMFNLMRKSGITCN 4
+ TWTS+IS + Q + E++ +F M + G+ N
Sbjct: 140 LVTWTSLISGYSQLDRPRESLVLFPHMLRHGLVPN 174
>gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 152 bits (383), Expect = 1e-34
Identities = 77/183 (42%), Positives = 111/183 (60%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSN 370
+++H ++ SDV T L S Y K G +E+A +VFD MP +D V+W A+IAG+S N
Sbjct: 140 RKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQN 199
Query: 369 RNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVS 190
P +L F M G PN TL V+ C L + QG Q+H YA++SG++SD V
Sbjct: 200 GQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVV 259
Query: 189 NVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSGIT 10
N LV MYAK G++ A KLF++M +R+VA+W +II + N+ EA++ FN M+ GI
Sbjct: 260 NGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIK 319
Query: 9 CNA 1
N+
Sbjct: 320 PNS 322
Score = 146 bits (369), Expect = 5e-33
Identities = 84/217 (38%), Positives = 122/217 (56%), Gaps = 1/217 (0%)
Frame = -2
Query: 660 LYSHFHPNNIR-NLSTKHSVTPQEFLAQNLEKTSHLNTKQLHSYLLKSALYSDVYSATRL 484
L+S N I+ N ST SV P LE+ KQ+H Y ++S + SDV L
Sbjct: 208 LFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQG-----KQIHCYAIRSGIESDVLVVNGL 262
Query: 483 ISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKSMLAEGFPPNY 304
++ Y K G + A K+F+ MP +D +W A+I G+S N +L F M G PN
Sbjct: 263 VNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNS 322
Query: 303 LTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDK 124
+T+ VL AC L + QG Q+H YA++SG +S+ V N LV MYAK G++ +A KLF++
Sbjct: 323 ITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFER 382
Query: 123 MLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSGI 13
M +NV W +IIS + Q+ EA+++F M+ GI
Sbjct: 383 MPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGI 419
Score = 132 bits (333), Expect = 7e-29
Identities = 63/178 (35%), Positives = 110/178 (61%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSN 370
+Q+H Y ++S S+ L++ Y K G + A K+F+ MP K+ V W A+I+G+S +
Sbjct: 342 QQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQH 401
Query: 369 RNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVS 190
+P +L F M A+G P+ + VL AC + QG Q+H Y ++SG +S+ V
Sbjct: 402 GHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVG 461
Query: 189 NVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSG 16
LV++YAK G++ A KLF++M ++V +WT++I A+ + GE+A+++F+ M+++G
Sbjct: 462 TGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETG 519
Score = 89.4 bits (220), Expect = 9e-16
Identities = 47/136 (34%), Positives = 75/136 (55%)
Frame = -2
Query: 408 VTWTAMIAGFSSNRNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSY 229
V W I G+ N ++L+ + M G P+ L V++AC + + G +VH
Sbjct: 86 VVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHED 145
Query: 228 ALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEA 49
+ G +SD V L MY K GSLENA ++FD+M R+V +W +II+ + QN EA
Sbjct: 146 IIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEA 205
Query: 48 ISMFNLMRKSGITCNA 1
+++F+ M+ +GI N+
Sbjct: 206 LALFSEMQVNGIKPNS 221
Score = 75.1 bits (183), Expect = 2e-11
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 6/173 (3%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSN 370
KQ+H Y ++S S+V T L+ Y K G + A K+F+ MP +D V+WT MI + +
Sbjct: 443 KQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIH 502
Query: 369 RNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKS--GLDSDCF 196
+ + +L F M G +++ +L AC QG Q + +KS GL
Sbjct: 503 GHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQ-YFQCMKSDYGLAPKLE 561
Query: 195 VSNVLVEMYAKSGSLENACKLFDKM-LVRNVATWTSIISA---HVQNNLGEEA 49
LV++ ++G L+ A + M L + W +++ A H LGE+A
Sbjct: 562 HYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQA 614
>ref|XP_006412272.1| hypothetical protein EUTSA_v10027054mg [Eutrema salsugineum]
gi|557113442|gb|ESQ53725.1| hypothetical protein
EUTSA_v10027054mg [Eutrema salsugineum]
Length = 638
Score = 151 bits (382), Expect = 2e-34
Identities = 74/213 (34%), Positives = 126/213 (59%), Gaps = 5/213 (2%)
Frame = -2
Query: 627 NLSTKHSVTPQEFLAQNLEKTSHLNTK-----QLHSYLLKSALYSDVYSATRLISSYCKN 463
N +H P EF ++ K + + QLH + LK +V+ + L+ Y +
Sbjct: 155 NQMLRHGFCPNEFTLSSVVKAAAAEPRGCCGHQLHCFCLKCGFDLNVHVGSSLLDLYTRY 214
Query: 462 GFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKSMLAEGFPPNYLTLNGVL 283
G M+DA VFD + N++ V+W A+IAG++ + +++L+ F+ ML EGF P++ + + +
Sbjct: 215 GLMDDAQLVFDALENRNDVSWNALIAGYARRCDTEKALELFQRMLREGFRPSHFSYSSLF 274
Query: 282 QACIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRNVA 103
C + QG VH+Y +KSG F N L++MYAKSGS+ +A K+FD++ R+V
Sbjct: 275 GTCSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLIDMYAKSGSIHDARKIFDRLAKRDVV 334
Query: 102 TWTSIISAHVQNNLGEEAISMFNLMRKSGITCN 4
+W S+++A+ Q+ G+EA+ +F MR++GI N
Sbjct: 335 SWNSLLTAYAQHGFGKEAVCLFEEMRRAGIPPN 367
Score = 128 bits (321), Expect = 2e-27
Identities = 64/176 (36%), Positives = 103/176 (58%)
Frame = -2
Query: 543 LHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRN 364
+H + KS D+ L++ Y K G +EDA KVFD+MP DFVTWT +I+G+S +
Sbjct: 87 VHGQVTKSLFRCDLVMNNTLLNMYAKCGSLEDARKVFDQMPQLDFVTWTTLISGYSQHGR 146
Query: 363 PQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNV 184
P+ +L F ML GF PN TL+ V++A A G G Q+H + LK G D + V +
Sbjct: 147 PRDALLLFNQMLRHGFCPNEFTLSSVVKAAAAEPRGCCGHQLHCFCLKCGFDLNVHVGSS 206
Query: 183 LVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSG 16
L+++Y + G +++A +FD + RN +W ++I+ + + E+A+ +F M + G
Sbjct: 207 LLDLYTRYGLMDDAQLVFDALENRNDVSWNALIAGYARRCDTEKALELFQRMLREG 262
Score = 79.0 bits (193), Expect = 1e-12
Identities = 43/171 (25%), Positives = 84/171 (49%), Gaps = 4/171 (2%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSN 370
K +H+Y++KS ++ LI Y K+G + DA K+FD + +D V+W +++ ++ +
Sbjct: 287 KWVHAYMIKSGEKLVAFAGNTLIDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQH 346
Query: 369 RNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVS 190
+ ++ F+ M G PPN ++ VL AC +G K G+ +
Sbjct: 347 GFGKEAVCLFEEMRRAGIPPNEISFLSVLTACSHSGLLDEGWHYFQLMKKDGIIPEASHY 406
Query: 189 NVLVEMYAKSGSLENACKLFDKMLVR-NVATWTSIISA---HVQNNLGEEA 49
+V++ ++G+L+ A + +M + A W ++++A H LG A
Sbjct: 407 VTIVDLLGRAGALDRALRFIREMPIEPTAAIWKALLNACRMHKNTELGAYA 457
Score = 68.2 bits (165), Expect = 2e-09
Identities = 37/97 (38%), Positives = 54/97 (55%)
Frame = -2
Query: 294 NGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLV 115
N L+ C +QG VH KS D ++N L+ MYAK GSLE+A K+FD+M
Sbjct: 69 NIFLKECAVSKRLAQGRIVHGQVTKSLFRCDLVMNNTLLNMYAKCGSLEDARKVFDQMPQ 128
Query: 114 RNVATWTSIISAHVQNNLGEEAISMFNLMRKSGITCN 4
+ TWT++IS + Q+ +A+ +FN M + G N
Sbjct: 129 LDFVTWTTLISGYSQHGRPRDALLLFNQMLRHGFCPN 165
>ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g11290 gi|332190592|gb|AEE28713.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 150 bits (378), Expect = 4e-34
Identities = 77/179 (43%), Positives = 112/179 (62%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSN 370
K++H L+KS D+++ T L + Y K + +A KVFD MP +D V+W ++AG+S N
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQN 214
Query: 369 RNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVS 190
+ +L+ KSM E P+++T+ VL A AL S G ++H YA++SG DS +S
Sbjct: 215 GMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS 274
Query: 189 NVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSGI 13
LV+MYAK GSLE A +LFD ML RNV +W S+I A+VQN +EA+ +F M G+
Sbjct: 275 TALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV 333
Score = 115 bits (287), Expect = 2e-23
Identities = 57/175 (32%), Positives = 97/175 (55%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSN 370
K++H Y ++S S V +T L+ Y K G +E A ++FD M ++ V+W +MI + N
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQN 315
Query: 369 RNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVS 190
NP+ ++ F+ ML EG P +++ G L AC L +G +H +++ GLD + V
Sbjct: 316 ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV 375
Query: 189 NVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMR 25
N L+ MY K ++ A +F K+ R + +W ++I QN +A++ F+ MR
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR 430
Score = 104 bits (259), Expect = 3e-20
Identities = 57/180 (31%), Positives = 93/180 (51%)
Frame = -2
Query: 543 LHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRN 364
+H ++ L +V LIS YCK ++ A +F ++ ++ V+W AMI GF+ N
Sbjct: 359 IHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 418
Query: 363 PQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNV 184
P +L F M + P+ T V+ A L+ +H ++S LD + FV+
Sbjct: 419 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 478
Query: 183 LVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSGITCN 4
LV+MYAK G++ A +FD M R+V TW ++I + + G+ A+ +F M+K I N
Sbjct: 479 LVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 538
Score = 94.7 bits (234), Expect = 2e-17
Identities = 53/184 (28%), Positives = 95/184 (51%), Gaps = 1/184 (0%)
Frame = -2
Query: 576 LEKTSHLNT-KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTW 400
LE+ S L +Q+ + K+ LY + + T+L+S +C+ G +++A +VF+ + +K V +
Sbjct: 44 LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103
Query: 399 TAMIAGFSSNRNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALK 220
M+ GF+ + ++LQ F M + P +L+ C G ++H +K
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163
Query: 219 SGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISM 40
SG D F L MYAK + A K+FD+M R++ +W +I++ + QN + A+ M
Sbjct: 164 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 223
Query: 39 FNLM 28
M
Sbjct: 224 VKSM 227
Score = 60.1 bits (144), Expect = 6e-07
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 6/175 (3%)
Frame = -2
Query: 555 NTKQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFS 376
+ K +H +++S L +V+ T L+ Y K G + A +FD M + TW AMI G+
Sbjct: 456 HAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515
Query: 375 SNRNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCF 196
++ + +L+ F+ M PN +T V+ AC G + Y +K +
Sbjct: 516 THGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF-YMMKENYSIELS 574
Query: 195 VSN--VLVEMYAKSGSLENACKLFDKMLVR-NVATWTSIISA---HVQNNLGEEA 49
+ + +V++ ++G L A +M V+ V + +++ A H N E+A
Sbjct: 575 MDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKA 629
>ref|XP_006304494.1| hypothetical protein CARUB_v10011264mg [Capsella rubella]
gi|482573205|gb|EOA37392.1| hypothetical protein
CARUB_v10011264mg [Capsella rubella]
Length = 811
Score = 147 bits (371), Expect = 3e-33
Identities = 76/179 (42%), Positives = 111/179 (62%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSN 370
K++H L+KS D+++ T L + Y K + +A KVFD MP +D V+W M+AG+S N
Sbjct: 157 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTMVAGYSQN 216
Query: 369 RNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVS 190
+ +L+ M E P+++T+ VL A AL S S G ++H YAL++G DS +S
Sbjct: 217 GMARMALEMVNRMCEENLKPSFITIVSVLPAVSALGSMSIGKEIHGYALRAGFDSLVNIS 276
Query: 189 NVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSGI 13
LV+MYAK GSL+ A +LFD ML RNV +W S+I A+VQN +EA+ +F M G+
Sbjct: 277 TSLVDMYAKCGSLKTARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDDGV 335
Score = 108 bits (270), Expect = 1e-21
Identities = 55/175 (31%), Positives = 94/175 (53%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSN 370
K++H Y L++ S V +T L+ Y K G ++ A ++FD M ++ V+W +MI + N
Sbjct: 258 KEIHGYALRAGFDSLVNISTSLVDMYAKCGSLKTARQLFDGMLERNVVSWNSMIDAYVQN 317
Query: 369 RNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVS 190
NP+ ++ F+ ML +G P +++ G L AC L +G +H + + LD + V
Sbjct: 318 ENPKEAMVIFQKMLDDGVKPTDVSVMGALHACADLGDLERGRFIHKLSTELDLDRNVSVV 377
Query: 189 NVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMR 25
N L+ MY K + A +F K+ R + +W ++I QN EA++ F+ MR
Sbjct: 378 NSLISMYCKCKEVNIAASIFGKLQTRTLVSWNAMILGFAQNGRPIEALNYFSQMR 432
Score = 103 bits (258), Expect = 4e-20
Identities = 56/180 (31%), Positives = 92/180 (51%)
Frame = -2
Query: 543 LHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRN 364
+H + L +V LIS YCK + A +F ++ + V+W AMI GF+ N
Sbjct: 361 IHKLSTELDLDRNVSVVNSLISMYCKCKEVNIAASIFGKLQTRTLVSWNAMILGFAQNGR 420
Query: 363 PQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNV 184
P +L F M + P+ T V+ A L+ Q +H +++ LD + FV+
Sbjct: 421 PIEALNYFSQMRTQTVKPDTFTYVSVITAIAELSVTHQAKWIHGVVMRNCLDKNVFVTTA 480
Query: 183 LVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSGITCN 4
LV+MYAK G++ A +FD M R+V TW ++I + + +G+ A+ +F M+K + N
Sbjct: 481 LVDMYAKCGAIITARLIFDLMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKCTVKPN 540
Score = 90.1 bits (222), Expect = 6e-16
Identities = 54/215 (25%), Positives = 105/215 (48%), Gaps = 10/215 (4%)
Frame = -2
Query: 642 PNNIRNLSTKHSVTPQEFLAQN---------LEKTSHL-NTKQLHSYLLKSALYSDVYSA 493
PN+ + +H ++ + ++ N LE+ S L + + + + K+ LY +
Sbjct: 15 PNSPNSSHHRHFLSQRTYIPANVYEHPAALLLERCSSLKDLRHILPLVFKNGLYQEHLFQ 74
Query: 492 TRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKSMLAEGFP 313
T+L+S +C+ G + +A +VF+ + +K V + M+ G++ + ++L F M +
Sbjct: 75 TKLVSLFCRYGSVVEAARVFEPIDDKLDVLYHTMLKGYAKVSDLDKALNFFVRMRYDDVE 134
Query: 312 PNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKL 133
P +L+ C G ++H +KSG D F L MYAK + A K+
Sbjct: 135 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKV 194
Query: 132 FDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLM 28
FD+M R++ +W ++++ + QN + A+ M N M
Sbjct: 195 FDRMPERDLVSWNTMVAGYSQNGMARMALEMVNRM 229
Score = 56.6 bits (135), Expect = 7e-06
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 9/176 (5%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSN 370
K +H ++++ L +V+ T L+ Y K G + A +FD M + TW AMI G+ ++
Sbjct: 460 KWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIITARLIFDLMSERHVTTWNAMIDGYGTH 519
Query: 369 RNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQV-----HSYALKSGLDS 205
+ +L+ F+ M PN +T V+ AC G + Y+++ +D
Sbjct: 520 GIGKAALELFEEMQKCTVKPNGVTFLSVISACSHSGLVEAGLKYFHRMQEDYSIEPSMDH 579
Query: 204 DCFVSNVLVEMYAKSGSLENACKLFDKMLVR-NVATWTSIISA---HVQNNLGEEA 49
+V++ ++G L A +M V+ V + +++ A H N E+A
Sbjct: 580 ----YGAMVDLLGRAGLLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKSVNFAEKA 631
>gb|EMJ15418.1| hypothetical protein PRUPE_ppa023254mg [Prunus persica]
Length = 563
Score = 147 bits (371), Expect = 3e-33
Identities = 73/206 (35%), Positives = 122/206 (59%), Gaps = 7/206 (3%)
Frame = -2
Query: 600 PQEFLAQNLEKTS-------HLNTKQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDAC 442
P +F +L K + + + +QLH+Y LK ++VY T L+ Y + G M+++
Sbjct: 87 PNQFTLSSLFKAAGAVSDDNNKHGRQLHAYCLKYGFDTNVYVGTSLVDMYARWGHMDESQ 146
Query: 441 KVFDEMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALN 262
+FD + K+ V+W A+IAG + + +L+ F ML EGF P + T + V AC +
Sbjct: 147 LIFDSLETKNEVSWNALIAGHARKAQGEHALRLFWKMLREGFKPTHFTYSSVFTACASAG 206
Query: 261 SGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIIS 82
S QG VH++ +KSG FV N L++MYAKSGS+E+A K+FD+++ +++ +W S+++
Sbjct: 207 SMEQGKWVHAHMIKSGAKLVAFVGNTLLDMYAKSGSIEDARKVFDRLVRQDIVSWNSMLT 266
Query: 81 AHVQNNLGEEAISMFNLMRKSGITCN 4
+ Q+ LG+E + F M + GI N
Sbjct: 267 GYAQHGLGQETVQRFEEMLRIGIQPN 292
Score = 132 bits (333), Expect = 7e-29
Identities = 64/178 (35%), Positives = 107/178 (60%), Gaps = 2/178 (1%)
Frame = -2
Query: 543 LHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRN 364
+H+++L S D+ +++ Y K G +EDA +FD+MP+KD VTWTA+I+G+S
Sbjct: 10 VHAHILTSHFKDDLPIHNTILNMYVKCGSLEDARNLFDQMPSKDLVTWTALISGYSQYDR 69
Query: 363 PQRSLQTFKSMLAEGFPPNYLTLNGVLQACIAL--NSGSQGTQVHSYALKSGLDSDCFVS 190
PQ +L F ML G PN TL+ + +A A+ ++ G Q+H+Y LK G D++ +V
Sbjct: 70 PQDALVLFPQMLLRGLEPNQFTLSSLFKAAGAVSDDNNKHGRQLHAYCLKYGFDTNVYVG 129
Query: 189 NVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSG 16
LV+MYA+ G ++ + +FD + +N +W ++I+ H + GE A+ +F M + G
Sbjct: 130 TSLVDMYARWGHMDESQLIFDSLETKNEVSWNALIAGHARKAQGEHALRLFWKMLREG 187
Score = 79.3 bits (194), Expect = 1e-12
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSN 370
K +H++++KS + L+ Y K+G +EDA KVFD + +D V+W +M+ G++ +
Sbjct: 212 KWVHAHMIKSGAKLVAFVGNTLLDMYAKSGSIEDARKVFDRLVRQDIVSWNSMLTGYAQH 271
Query: 369 RNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVS 190
Q ++Q F+ ML G PN +T VL AC +G ++
Sbjct: 272 GLGQETVQRFEEMLRIGIQPNDITFLCVLTACSHAGLLDEGQYYFDLMKSYNIELQISHY 331
Query: 189 NVLVEMYAKSGSLENACKLFDKMLVR-NVATWTSIISA---HVQNNLGEEA 49
+V++ ++G L+ A K +M + A W +++ A H +LG A
Sbjct: 332 VTIVDLLGRAGLLDRAAKFIREMPIEPTAAVWGALLGACRMHKNIDLGAYA 382
Score = 59.7 bits (143), Expect = 8e-07
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = -2
Query: 252 QGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHV 73
Q VH++ L S D + N ++ MY K GSLE+A LFD+M +++ TWT++IS +
Sbjct: 6 QARIVHAHILTSHFKDDLPIHNTILNMYVKCGSLEDARNLFDQMPSKDLVTWTALISGYS 65
Query: 72 QNNLGEEAISMFNLMRKSGITCN 4
Q + ++A+ +F M G+ N
Sbjct: 66 QYDRPQDALVLFPQMLLRGLEPN 88
>ref|XP_006296670.1| hypothetical protein CARUB_v10016279mg [Capsella rubella]
gi|482565379|gb|EOA29568.1| hypothetical protein
CARUB_v10016279mg [Capsella rubella]
Length = 717
Score = 145 bits (365), Expect = 1e-32
Identities = 72/205 (35%), Positives = 122/205 (59%), Gaps = 5/205 (2%)
Frame = -2
Query: 603 TPQEFLAQNLEKTSHLNTK-----QLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACK 439
+P EF ++ K + T+ QLH + +K S+V+ + L+ Y + G M+DA
Sbjct: 167 SPNEFTLSSVIKAAAAETRGCIGHQLHGFCIKCGFDSNVHVGSALLDLYTRYGLMDDAQL 226
Query: 438 VFDEMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNS 259
VFD + +++ V+W A+IAG + +++L+ F+ ML +GF P++ + + AC +
Sbjct: 227 VFDALESRNDVSWNALIAGHARRCGTEKALELFQHMLRDGFRPSHFSYASLFGACSSTGF 286
Query: 258 GSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISA 79
QG VH+Y +KSG F N L++MYAKSGS+++A K+FD++ R+V +W S+++A
Sbjct: 287 LEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIDDARKIFDRLAKRDVVSWNSLLTA 346
Query: 78 HVQNNLGEEAISMFNLMRKSGITCN 4
+ Q+ G EA+ F MR+ GI N
Sbjct: 347 YAQHGFGNEAVYWFEEMRRGGIRPN 371
Score = 135 bits (340), Expect = 1e-29
Identities = 69/213 (32%), Positives = 121/213 (56%), Gaps = 4/213 (1%)
Frame = -2
Query: 642 PNNIRNLSTKHSVTPQEFLAQNLEKTSHLNT----KQLHSYLLKSALYSDVYSATRLISS 475
P NI + + + F L+K + N + +H++L++S D+ L++
Sbjct: 54 PANINYIDGSYIPADRRFYNMLLKKCTVFNLITQGRIVHAHLIQSIFRHDLVMYNTLLNM 113
Query: 474 YCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKSMLAEGFPPNYLTL 295
Y K G +E+A KVFD+MP++DFVTWT +I+G+S + + +L F M+ GF PN TL
Sbjct: 114 YAKCGSLEEARKVFDQMPHRDFVTWTTLISGYSQHGRSRDALLLFNQMVGFGFSPNEFTL 173
Query: 294 NGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLV 115
+ V++A A G G Q+H + +K G DS+ V + L+++Y + G +++A +FD +
Sbjct: 174 SSVIKAAAAETRGCIGHQLHGFCIKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES 233
Query: 114 RNVATWTSIISAHVQNNLGEEAISMFNLMRKSG 16
RN +W ++I+ H + E+A+ +F M + G
Sbjct: 234 RNDVSWNALIAGHARRCGTEKALELFQHMLRDG 266
Score = 79.3 bits (194), Expect = 1e-12
Identities = 51/218 (23%), Positives = 100/218 (45%), Gaps = 9/218 (4%)
Frame = -2
Query: 675 KKWVRLYSH-----FHPNNIRNLSTKHSVTPQEFLAQNLEKTSHLNTKQLHSYLLKSALY 511
+K + L+ H F P++ S + + FL Q K +H+Y++KS
Sbjct: 253 EKALELFQHMLRDGFRPSHFSYASLFGACSSTGFLEQG---------KWVHAYMIKSGEK 303
Query: 510 SDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKSM 331
++ L+ Y K+G ++DA K+FD + +D V+W +++ ++ + ++ F+ M
Sbjct: 304 LVAFAGNTLLDMYAKSGSIDDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVYWFEEM 363
Query: 330 LAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSL 151
G PN ++ VL AC +G Q K G+ + + +V++ ++G L
Sbjct: 364 RRGGIRPNEISFLSVLTACSHSGLLDEGWQYFELMKKDGIVPEAWHYVTVVDLLGRAGDL 423
Query: 150 ENACKLFDKMLVR-NVATWTSIISA---HVQNNLGEEA 49
A + ++M + A W ++++A H LG A
Sbjct: 424 NRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYA 461
Score = 72.8 bits (177), Expect = 9e-11
Identities = 38/97 (39%), Positives = 58/97 (59%)
Frame = -2
Query: 294 NGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLV 115
N +L+ C N +QG VH++ ++S D + N L+ MYAK GSLE A K+FD+M
Sbjct: 73 NMLLKKCTVFNLITQGRIVHAHLIQSIFRHDLVMYNTLLNMYAKCGSLEEARKVFDQMPH 132
Query: 114 RNVATWTSIISAHVQNNLGEEAISMFNLMRKSGITCN 4
R+ TWT++IS + Q+ +A+ +FN M G + N
Sbjct: 133 RDFVTWTTLISGYSQHGRSRDALLLFNQMVGFGFSPN 169
>ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297331463|gb|EFH61882.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 624
Score = 144 bits (363), Expect = 2e-32
Identities = 73/213 (34%), Positives = 122/213 (57%), Gaps = 5/213 (2%)
Frame = -2
Query: 627 NLSTKHSVTPQEFLAQNLEKTSHLNTK-----QLHSYLLKSALYSDVYSATRLISSYCKN 463
N + +P EF ++ K + + QLH + +K S+V+ + L+ Y +
Sbjct: 141 NQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRY 200
Query: 462 GFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKSMLAEGFPPNYLTLNGVL 283
G M+DA VFD + +++ V+W A+IAG + +++L+ F+ ML EGF P++ + +
Sbjct: 201 GLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLF 260
Query: 282 QACIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRNVA 103
AC + QG VH+Y +KSG F N L++MYAKSGS+ +A K+FD++ R+V
Sbjct: 261 GACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVV 320
Query: 102 TWTSIISAHVQNNLGEEAISMFNLMRKSGITCN 4
+W S+++A+ Q+ G EA+ F MR+ GI N
Sbjct: 321 SWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPN 353
Score = 133 bits (334), Expect = 6e-29
Identities = 64/176 (36%), Positives = 106/176 (60%)
Frame = -2
Query: 543 LHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRN 364
+H +L++S D+ L++ Y K G +E+A KVFD+MP +DFVTWT +I+G+S +
Sbjct: 73 VHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDR 132
Query: 363 PQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNV 184
P +L F ML GF PN TL+ V++A A G G Q+H + +K G DS+ V +
Sbjct: 133 PFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 192
Query: 183 LVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSG 16
L+++Y + G +++A +FD + RN +W ++I+ H + E+A+ +F M + G
Sbjct: 193 LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREG 248
Score = 75.9 bits (185), Expect = 1e-11
Identities = 41/171 (23%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSN 370
K +H+Y++KS ++ L+ Y K+G + DA K+FD + +D V+W +++ ++ +
Sbjct: 273 KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQH 332
Query: 369 RNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVS 190
++ F+ M G PN ++ VL AC +G + K G+ + +
Sbjct: 333 GFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHY 392
Query: 189 NVLVEMYAKSGSLENACKLFDKMLVR-NVATWTSIISA---HVQNNLGEEA 49
+V++ ++G L A + ++M + A W ++++A H LG A
Sbjct: 393 VTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYA 443
Score = 73.9 bits (180), Expect = 4e-11
Identities = 38/97 (39%), Positives = 59/97 (60%)
Frame = -2
Query: 294 NGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLV 115
N +L+ C +QG VH + ++S D ++N L+ MYAK GSLE A K+FDKM
Sbjct: 55 NTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPE 114
Query: 114 RNVATWTSIISAHVQNNLGEEAISMFNLMRKSGITCN 4
R+ TWT++IS + Q++ +A+ +FN M + G + N
Sbjct: 115 RDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPN 151
>gb|EOY29048.1| Tetratricopeptide repeat-like superfamily protein isoform 1
[Theobroma cacao] gi|508781793|gb|EOY29049.1|
Tetratricopeptide repeat-like superfamily protein
isoform 1 [Theobroma cacao] gi|508781794|gb|EOY29050.1|
Tetratricopeptide repeat-like superfamily protein
isoform 1 [Theobroma cacao]
Length = 675
Score = 143 bits (361), Expect = 4e-32
Identities = 72/208 (34%), Positives = 121/208 (58%), Gaps = 9/208 (4%)
Frame = -2
Query: 600 PQEFLAQNLEKTS---------HLNTKQLHSYLLKSALYSDVYSATRLISSYCKNGFMED 448
P +F +L K S H + QLH++ K L+S+VY + L+ Y + G M++
Sbjct: 197 PNQFTLSSLLKASAALPDTPHIHFHGTQLHAFCFKCGLHSNVYVGSSLLDMYARCGCMDE 256
Query: 447 ACKVFDEMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIA 268
A +FD + +K+ V+W A+IAG + +L F+ ML + F P + T +L AC +
Sbjct: 257 ARLIFDALHSKNEVSWNALIAGHARKGQADHALWLFRKMLRQDFQPTHFTFCSILGACAS 316
Query: 267 LNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRNVATWTSI 88
S QG VH++ +KSG + F+ N L+ MYAKSGS+++A +FD+++ +V +W S+
Sbjct: 317 TGSLEQGKWVHAHVIKSGGEIVAFMGNTLLHMYAKSGSIQDAKMIFDRLVKSDVVSWNSM 376
Query: 87 ISAHVQNNLGEEAISMFNLMRKSGITCN 4
++A+ Q+ LG+EA+ F M + G+ N
Sbjct: 377 LTAYAQHGLGKEAVQWFQEMLRIGVGPN 404
Score = 122 bits (305), Expect = 1e-25
Identities = 70/224 (31%), Positives = 122/224 (54%), Gaps = 13/224 (5%)
Frame = -2
Query: 660 LYSHFHPN----NIRNLSTKHSVTPQEFLAQNL-EKTSHLNTKQL----HSYLLKSALYS 508
L HP+ ++ +L + S+ P L L +K + L +L H+++L S
Sbjct: 72 LQKSLHPSGTGLHVLDLLDQGSLEPHRALYHLLLKKCTRLRKPKLGKIVHAHILNSLFRH 131
Query: 507 DVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKSML 328
D+ L++ Y K G ++DA +FD+MP KD V+WT +I +S + P ++ F ML
Sbjct: 132 DLVILNSLLNMYAKCGCLDDARNLFDQMPVKDMVSWTTLITAYSQHGRPFHAILLFPHML 191
Query: 327 AEGFPPNYLTLNGVLQACIAL----NSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKS 160
+ GF PN TL+ +L+A AL + GTQ+H++ K GL S+ +V + L++MYA+
Sbjct: 192 SLGFFPNQFTLSSLLKASAALPDTPHIHFHGTQLHAFCFKCGLHSNVYVGSSLLDMYARC 251
Query: 159 GSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLM 28
G ++ A +FD + +N +W ++I+ H + + A+ +F M
Sbjct: 252 GCMDEARLIFDALHSKNEVSWNALIAGHARKGQADHALWLFRKM 295
Score = 69.3 bits (168), Expect = 1e-09
Identities = 44/173 (25%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSN 370
K +H++++KS + L+ Y K+G ++DA +FD + D V+W +M+ ++ +
Sbjct: 324 KWVHAHVIKSGGEIVAFMGNTLLHMYAKSGSIQDAKMIFDRLVKSDVVSWNSMLTAYAQH 383
Query: 369 RNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVS 190
+ ++Q F+ ML G PN +T +L AC QG + + L S + + +S
Sbjct: 384 GLGKEAVQWFQEMLRIGVGPNDITFLCLLTACSRAGLLDQGQ--YYFKLMSNYNIEPQIS 441
Query: 189 N--VLVEMYAKSGSLENACKLFDKMLVR-NVATWTSIISA---HVQNNLGEEA 49
+ +V+++ ++G L+ A + +M ++ A W +++ A H LG A
Sbjct: 442 HYVTIVDLFGRAGLLDKAERFIREMPIKPTAAVWGALLGACRMHKNMELGTYA 494
Score = 61.6 bits (148), Expect = 2e-07
Identities = 34/95 (35%), Positives = 53/95 (55%)
Frame = -2
Query: 288 VLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRN 109
+L+ C L G VH++ L S D + N L+ MYAK G L++A LFD+M V++
Sbjct: 104 LLKKCTRLRKPKLGKIVHAHILNSLFRHDLVILNSLLNMYAKCGCLDDARNLFDQMPVKD 163
Query: 108 VATWTSIISAHVQNNLGEEAISMFNLMRKSGITCN 4
+ +WT++I+A+ Q+ AI +F M G N
Sbjct: 164 MVSWTTLITAYSQHGRPFHAILLFPHMLSLGFFPN 198
>sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product
[Arabidopsis thaliana]
Length = 633
Score = 142 bits (359), Expect = 7e-32
Identities = 72/213 (33%), Positives = 123/213 (57%), Gaps = 5/213 (2%)
Frame = -2
Query: 627 NLSTKHSVTPQEFLAQNLEKTSHLNTK-----QLHSYLLKSALYSDVYSATRLISSYCKN 463
N + +P EF ++ K + + QLH + +K S+V+ + L+ Y +
Sbjct: 150 NQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRY 209
Query: 462 GFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKSMLAEGFPPNYLTLNGVL 283
G M+DA VFD + +++ V+W A+IAG + +++L+ F+ ML +GF P++ + +
Sbjct: 210 GLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLF 269
Query: 282 QACIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRNVA 103
AC + QG VH+Y +KSG F N L++MYAKSGS+ +A K+FD++ R+V
Sbjct: 270 GACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVV 329
Query: 102 TWTSIISAHVQNNLGEEAISMFNLMRKSGITCN 4
+W S+++A+ Q+ G+EA+ F MR+ GI N
Sbjct: 330 SWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Score = 133 bits (335), Expect = 4e-29
Identities = 62/176 (35%), Positives = 108/176 (61%)
Frame = -2
Query: 543 LHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRN 364
+H+++L+S D+ L++ Y K G +E+A KVF++MP +DFVTWT +I+G+S +
Sbjct: 82 VHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDR 141
Query: 363 PQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNV 184
P +L F ML G+ PN TL+ V++A A G G Q+H + +K G DS+ V +
Sbjct: 142 PCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 201
Query: 183 LVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSG 16
L+++Y + G +++A +FD + RN +W ++I+ H + + E+A+ +F M + G
Sbjct: 202 LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Score = 76.6 bits (187), Expect = 6e-12
Identities = 41/171 (23%), Positives = 84/171 (49%), Gaps = 4/171 (2%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSN 370
K +H+Y++KS ++ L+ Y K+G + DA K+FD + +D V+W +++ ++ +
Sbjct: 282 KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQH 341
Query: 369 RNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVS 190
+ ++ F+ M G PN ++ VL AC +G + K G+ + +
Sbjct: 342 GFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHY 401
Query: 189 NVLVEMYAKSGSLENACKLFDKMLVR-NVATWTSIISA---HVQNNLGEEA 49
+V++ ++G L A + ++M + A W ++++A H LG A
Sbjct: 402 VTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYA 452
Score = 70.5 bits (171), Expect = 5e-10
Identities = 38/97 (39%), Positives = 57/97 (58%)
Frame = -2
Query: 294 NGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLV 115
N +L+ C QG VH++ L+S D + N L+ MYAK GSLE A K+F+KM
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 114 RNVATWTSIISAHVQNNLGEEAISMFNLMRKSGITCN 4
R+ TWT++IS + Q++ +A+ FN M + G + N
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPN 160
>ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 142 bits (359), Expect = 7e-32
Identities = 72/213 (33%), Positives = 123/213 (57%), Gaps = 5/213 (2%)
Frame = -2
Query: 627 NLSTKHSVTPQEFLAQNLEKTSHLNTK-----QLHSYLLKSALYSDVYSATRLISSYCKN 463
N + +P EF ++ K + + QLH + +K S+V+ + L+ Y +
Sbjct: 150 NQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRY 209
Query: 462 GFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKSMLAEGFPPNYLTLNGVL 283
G M+DA VFD + +++ V+W A+IAG + +++L+ F+ ML +GF P++ + +
Sbjct: 210 GLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLF 269
Query: 282 QACIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRNVA 103
AC + QG VH+Y +KSG F N L++MYAKSGS+ +A K+FD++ R+V
Sbjct: 270 GACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVV 329
Query: 102 TWTSIISAHVQNNLGEEAISMFNLMRKSGITCN 4
+W S+++A+ Q+ G+EA+ F MR+ GI N
Sbjct: 330 SWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Score = 133 bits (335), Expect = 4e-29
Identities = 62/176 (35%), Positives = 108/176 (61%)
Frame = -2
Query: 543 LHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRN 364
+H+++L+S D+ L++ Y K G +E+A KVF++MP +DFVTWT +I+G+S +
Sbjct: 82 VHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDR 141
Query: 363 PQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNV 184
P +L F ML G+ PN TL+ V++A A G G Q+H + +K G DS+ V +
Sbjct: 142 PCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 201
Query: 183 LVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSG 16
L+++Y + G +++A +FD + RN +W ++I+ H + + E+A+ +F M + G
Sbjct: 202 LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Score = 76.6 bits (187), Expect = 6e-12
Identities = 41/171 (23%), Positives = 84/171 (49%), Gaps = 4/171 (2%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSN 370
K +H+Y++KS ++ L+ Y K+G + DA K+FD + +D V+W +++ ++ +
Sbjct: 282 KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQH 341
Query: 369 RNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVS 190
+ ++ F+ M G PN ++ VL AC +G + K G+ + +
Sbjct: 342 GFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHY 401
Query: 189 NVLVEMYAKSGSLENACKLFDKMLVR-NVATWTSIISA---HVQNNLGEEA 49
+V++ ++G L A + ++M + A W ++++A H LG A
Sbjct: 402 VTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYA 452
Score = 70.5 bits (171), Expect = 5e-10
Identities = 38/97 (39%), Positives = 57/97 (58%)
Frame = -2
Query: 294 NGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLV 115
N +L+ C QG VH++ L+S D + N L+ MYAK GSLE A K+F+KM
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 114 RNVATWTSIISAHVQNNLGEEAISMFNLMRKSGITCN 4
R+ TWT++IS + Q++ +A+ FN M + G + N
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPN 160
>ref|XP_006833353.1| hypothetical protein AMTR_s00109p00094190 [Amborella trichopoda]
gi|548838029|gb|ERM98631.1| hypothetical protein
AMTR_s00109p00094190 [Amborella trichopoda]
Length = 618
Score = 142 bits (358), Expect = 9e-32
Identities = 72/209 (34%), Positives = 124/209 (59%), Gaps = 5/209 (2%)
Frame = -2
Query: 615 KHSVTPQEFLAQNL-----EKTSHLNTKQLHSYLLKSALYSDVYSATRLISSYCKNGFME 451
+ VTP EF ++ K + +KQLH++ +K++ Y++ Y T L+ Y K ++
Sbjct: 140 REKVTPSEFSLSSILCACSAKLALEESKQLHAFAIKTSFYTNTYVGTSLLDIYAKCNLID 199
Query: 450 DACKVFDEMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACI 271
D+ VFDEMP + V+W+ MI+G+ +N + +L+ F L+ GF +L+ L AC
Sbjct: 200 DSSLVFDEMPERSEVSWSLMISGYVNNDECEEALKLFGISLSRGFAVTEFSLSSSLSACA 259
Query: 270 ALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRNVATWTS 91
+L + +G Q+H+ A++SG + FV L++MYAKSGS+E + K+F ++ RNV W +
Sbjct: 260 SLAALIEGNQLHALAIRSGFLLNLFVDASLIDMYAKSGSIEESYKVFSSLIDRNVVIWNA 319
Query: 90 IISAHVQNNLGEEAISMFNLMRKSGITCN 4
+IS ++ G +A+ MF M++ G+ N
Sbjct: 320 MISGFSKHACGIQALMMFEKMKQIGLEPN 348
Score = 113 bits (282), Expect = 6e-23
Identities = 61/210 (29%), Positives = 116/210 (55%), Gaps = 5/210 (2%)
Frame = -2
Query: 630 RNLSTKHSVTPQEFLAQNLEKTSHLNT-----KQLHSYLLKSALYSDVYSATRLISSYCK 466
R++S P L QNL + L K H++++++ L +D + LI+ Y K
Sbjct: 34 RSISLTEEREPGLHLLQNLLQRCVLEKSLSKGKSYHAHIIQNRLQTDTKLSNILINMYWK 93
Query: 465 NGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKSMLAEGFPPNYLTLNGV 286
G ++ A VFD MP K V+W +I G++ N ++++ F M+ E P+ +L+ +
Sbjct: 94 CGSLDYARFVFDSMPQKSLVSWNMIIGGYTQNGEEDQAMKLFLKMMREKVTPSEFSLSSI 153
Query: 285 LQACIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRNV 106
L AC A + + Q+H++A+K+ ++ +V L+++YAK ++++ +FD+M R+
Sbjct: 154 LCACSAKLALEESKQLHAFAIKTSFYTNTYVGTSLLDIYAKCNLIDDSSLVFDEMPERSE 213
Query: 105 ATWTSIISAHVQNNLGEEAISMFNLMRKSG 16
+W+ +IS +V N+ EEA+ +F + G
Sbjct: 214 VSWSLMISGYVNNDECEEALKLFGISLSRG 243
Score = 74.3 bits (181), Expect = 3e-11
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
Frame = -2
Query: 546 QLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNR 367
QLH+ ++S +++ LI Y K+G +E++ KVF + +++ V W AMI+GFS +
Sbjct: 269 QLHALAIRSGFLLNLFVDASLIDMYAKSGSIEESYKVFSSLIDRNVVIWNAMISGFSKHA 328
Query: 366 NPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSN 187
++L F+ M G PN T +L AC +G Q H + + D
Sbjct: 329 CGIQALMMFEKMKQIGLEPNRTTYTSLLSACAHSGLVEEG-QRHFALMARDFEPDVHHYA 387
Query: 186 VLVEMYAKSGSLENACKLFDKM-LVRNVATWTSIISA-HVQNNLGEEAISMFNL 31
+V++ ++G ++ A +L D M + W S++ A NL I+ NL
Sbjct: 388 CIVDLLGRAGFIDEAKRLIDLMPFEPTPSIWGSLLGASRFYKNLSLAEIAAKNL 441
Score = 69.7 bits (169), Expect = 8e-10
Identities = 38/124 (30%), Positives = 69/124 (55%)
Frame = -2
Query: 381 FSSNRNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSD 202
F + P+ ++ S+ E P +L L +LQ C+ S S+G H++ +++ L +D
Sbjct: 22 FKLSAQPEITIPRSISLTEEREPGLHL-LQNLLQRCVLEKSLSKGKSYHAHIIQNRLQTD 80
Query: 201 CFVSNVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRK 22
+SN+L+ MY K GSL+ A +FD M +++ +W II + QN ++A+ +F M +
Sbjct: 81 TKLSNILINMYWKCGSLDYARFVFDSMPQKSLVSWNMIIGGYTQNGEEDQAMKLFLKMMR 140
Query: 21 SGIT 10
+T
Sbjct: 141 EKVT 144
>ref|XP_004965888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Setaria italica]
Length = 608
Score = 142 bits (358), Expect = 9e-32
Identities = 70/191 (36%), Positives = 115/191 (60%)
Frame = -2
Query: 576 LEKTSHLNTKQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWT 397
+E+ + +Q+H+ ++ + +Y ATRL+ Y + G +EDA V D MP ++ V+WT
Sbjct: 46 VERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNVVSWT 105
Query: 396 AMIAGFSSNRNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKS 217
AMI+G+S N P +++ F ML G PN TL VL +C Q QVH++A+K+
Sbjct: 106 AMISGYSQNERPAEAMELFVMMLRAGCEPNEFTLASVLTSCTGSQGIHQVKQVHAFAVKT 165
Query: 216 GLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMF 37
+ FV + L++MYAKS +++ A ++FD + R+V ++T+IIS + Q L EEA+ +F
Sbjct: 166 NFELHMFVGSALLDMYAKSENVQEARRVFDMLPARDVVSYTAIISGYTQLGLDEEALDLF 225
Query: 36 NLMRKSGITCN 4
+ G+ CN
Sbjct: 226 RQLYNEGMQCN 236
Score = 101 bits (251), Expect = 2e-19
Identities = 52/176 (29%), Positives = 98/176 (55%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSN 370
KQ+H++ +K+ ++ + L+ Y K+ +++A +VFD +P +D V++TA+I+G++
Sbjct: 156 KQVHAFAVKTNFELHMFVGSALLDMYAKSENVQEARRVFDMLPARDVVSYTAIISGYTQL 215
Query: 369 RNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVS 190
+ +L F+ + EG N +T +L A L S G QVH L+ L +
Sbjct: 216 GLDEEALDLFRQLYNEGMQCNEVTFTALLNALSGLASLDYGKQVHGLILRKELPFFMVLQ 275
Query: 189 NVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRK 22
N L++MY+K G L + ++F+ M R+V +W +I+ + ++ L E +F MR+
Sbjct: 276 NSLIDMYSKCGKLLYSRRVFNNMPKRSVVSWNAILMGYGRHGLAHEVAQLFRSMRE 331
Score = 63.2 bits (152), Expect = 7e-08
Identities = 32/91 (35%), Positives = 54/91 (59%)
Frame = -2
Query: 276 CIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRNVATW 97
C+ + +G QVH+ + +G +++ LV MYA+ G+LE+A + D M RNV +W
Sbjct: 45 CVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNVVSW 104
Query: 96 TSIISAHVQNNLGEEAISMFNLMRKSGITCN 4
T++IS + QN EA+ +F +M ++G N
Sbjct: 105 TAMISGYSQNERPAEAMELFVMMLRAGCEPN 135
>ref|XP_004292817.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Fragaria vesca subsp. vesca]
Length = 706
Score = 141 bits (356), Expect = 2e-31
Identities = 81/230 (35%), Positives = 123/230 (53%), Gaps = 6/230 (2%)
Frame = -2
Query: 675 KKWVRLYSHFHPNNIR------NLSTKHSVTPQEFLAQNLEKTSHLNTKQLHSYLLKSAL 514
K+ + L+ + NN++ +L K + +LA K L Q+H++LLKS
Sbjct: 32 KQALLLFRNLFENNLKPNDLTFSLLLKACTSSSSYLASGNAK---LEVNQIHTHLLKSGF 88
Query: 513 YSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKS 334
VY T L+ Y K G + +A K+FD MP +D V+W A+I G S N + +L+ F
Sbjct: 89 DRFVYVGTALLDLYMKLGQVRNAQKMFDGMPERDDVSWNAVICGVSRNGHHSAALELFVQ 148
Query: 333 MLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGS 154
M EGF P + TL ++ +C QG VH + +K GLDSD V N L MY K G
Sbjct: 149 MCREGFSPGHTTLVSLVPSCGRHEFAFQGKSVHGFGIKGGLDSDSQVQNALTSMYGKCGD 208
Query: 153 LENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSGITCN 4
LE A LF++++ + V +W ++I A+ QN +EA+ +F MR+ + N
Sbjct: 209 LEAAEVLFEEIVYKGVDSWNTMIGAYGQNGCFDEAMLVFRRMREESVQAN 258
Score = 107 bits (268), Expect = 3e-21
Identities = 57/176 (32%), Positives = 95/176 (53%)
Frame = -2
Query: 540 HSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRNP 361
H Y LK+ L +D LIS Y + +EDA +F EM K +TW ++I+G
Sbjct: 377 HGYGLKTGLAADSLVVNGLISMYSRFDKIEDAFSLFSEMGEKPLITWNSLISGCVQAGRS 436
Query: 360 QRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNVL 181
+L+ F M G P+ +T++ +L C L G +H+Y L++ L+ + FV L
Sbjct: 437 SDALELFSQMQMSGHSPDSVTISSLLSGCCQLEYLKFGEGLHTYVLRNNLEGEDFVGTAL 496
Query: 180 VEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSGI 13
++MY K G +E+A +F+ + +ATW S+ISA+ L +A+ F+ M++ G+
Sbjct: 497 IDMYTKCGRIEHAEMVFNSIKEPCLATWNSMISAYSLYGLEHKALVCFSKMQERGL 552
Score = 84.3 bits (207), Expect = 3e-14
Identities = 47/175 (26%), Positives = 86/175 (49%)
Frame = -2
Query: 540 HSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRNP 361
H + +K+ L ++ T LI Y G+ E ++ +P+K V+ TA+I+ + +
Sbjct: 276 HCHAIKTGLVNNASVITSLICEYATRGYTETGELLYKSLPHKTLVSLTALISSHAEKGDM 335
Query: 360 QRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNVL 181
+ ++ F + + + + +L G H Y LK+GL +D V N L
Sbjct: 336 SQVMECFADLQQLEMKLDAVAMVSILHGIKHPAEFGLGLAFHGYGLKTGLAADSLVVNGL 395
Query: 180 VEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSG 16
+ MY++ +E+A LF +M + + TW S+IS VQ +A+ +F+ M+ SG
Sbjct: 396 ISMYSRFDKIEDAFSLFSEMGEKPLITWNSLISGCVQAGRSSDALELFSQMQMSG 450
Score = 72.8 bits (177), Expect = 9e-11
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Frame = -2
Query: 456 MEDACKV-FDEMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKSMLAEGFPPNYLTLNGVLQ 280
M AC + F P+ V + +++ + P+++L F+++ PN LT + +L+
Sbjct: 1 MNLACSIGFSTKPS--LVYFHSLLNSHIQTKTPKQALLLFRNLFENNLKPNDLTFSLLLK 58
Query: 279 ACIA----LNSGS---QGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKM 121
AC + L SG+ + Q+H++ LKSG D +V L+++Y K G + NA K+FD M
Sbjct: 59 ACTSSSSYLASGNAKLEVNQIHTHLLKSGFDRFVYVGTALLDLYMKLGQVRNAQKMFDGM 118
Query: 120 LVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSGIT 10
R+ +W ++I +N A+ +F M + G +
Sbjct: 119 PERDDVSWNAVICGVSRNGHHSAALELFVQMCREGFS 155
Score = 65.1 bits (157), Expect = 2e-08
Identities = 44/171 (25%), Positives = 77/171 (45%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSN 370
K +H + +K L SD L S Y K G +E A +F+E+ K +W MI + N
Sbjct: 178 KSVHGFGIKGGLDSDSQVQNALTSMYGKCGDLEAAEVLFEEIVYKGVDSWNTMIGAYGQN 237
Query: 369 RNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVS 190
++ F+ M E N +T+ +L A + H +A+K+GL ++ V
Sbjct: 238 GCFDEAMLVFRRMREESVQANVVTMVSLLSA------NADPGSTHCHAIKTGLVNNASVI 291
Query: 189 NVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMF 37
L+ YA G E L+ + + + + T++IS+H + + + F
Sbjct: 292 TSLICEYATRGYTETGELLYKSLPHKTLVSLTALISSHAEKGDMSQVMECF 342
Score = 57.8 bits (138), Expect = 3e-06
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 9/172 (5%)
Frame = -2
Query: 543 LHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRN 364
LH+Y+L++ L + + T LI Y K G +E A VF+ + TW +MI+ +S
Sbjct: 477 LHTYVLRNNLEGEDFVGTALIDMYTKCGRIEHAEMVFNSIKEPCLATWNSMISAYSLYGL 536
Query: 363 PQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQG-----TQVHSYALKSGLDSDC 199
++L F M G P+ +T VL AC +G + + GL
Sbjct: 537 EHKALVCFSKMQERGLKPDKITFLAVLAACTHGGLVQEGKTYFIMMKEKFNIMPGLQH-- 594
Query: 198 FVSNVLVEMYAKSGSLENACKLFDKMLVR-NVATWTSIISA---HVQNNLGE 55
++ ++ ++G L+ A M + A W ++++A H + LGE
Sbjct: 595 --CACMINLFGRAGLLDQAFFFIRSMETNPDFAVWGALLNACCIHHEVKLGE 644
>ref|XP_002514406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546503|gb|EEF48002.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 436
Score = 141 bits (355), Expect = 2e-31
Identities = 75/184 (40%), Positives = 107/184 (58%)
Frame = -2
Query: 555 NTKQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFS 376
N +QLH ++KS L SDVY + LI Y K G E+A VF+EM D + W ++IAGF+
Sbjct: 173 NLRQLHGNIIKSGLDSDVYVRSALIDIYSKWGESENALYVFNEMVTGDLIVWNSIIAGFA 232
Query: 375 SNRNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCF 196
N + +L FKSM GFP N L VL+AC L G QVH + K D D
Sbjct: 233 QNNDGDEALNLFKSMKRNGFPANQSALTSVLRACTGLALLELGRQVHVHVFKH--DQDLV 290
Query: 195 VSNVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSG 16
++N L++MY K GSLE+A +F +M+ ++V +W+++I+ QN EA+ +F M+ SG
Sbjct: 291 LNNALLDMYCKCGSLEDANYVFTRMVEKDVISWSTMIAGFAQNGYSREALKLFESMKVSG 350
Query: 15 ITCN 4
N
Sbjct: 351 TKPN 354
Score = 132 bits (331), Expect = 1e-28
Identities = 66/202 (32%), Positives = 119/202 (58%)
Frame = -2
Query: 609 SVTPQEFLAQNLEKTSHLNTKQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFD 430
S T E + L + + KQ++ +L + +++ L++ Y K +++A +FD
Sbjct: 57 SFTYSELIKCCLARNAIEQGKQVYKHLSSNGYQPNIFLINMLLNMYVKFNLLDEALTLFD 116
Query: 429 EMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQ 250
+MP ++ V+WT MI+ FS+ + ++L+ ML EG PN T + +L+AC + +
Sbjct: 117 QMPERNVVSWTTMISAFSNAKLNDKALEFLICMLREGVKPNVYTYSSILRACDGVYN--- 173
Query: 249 GTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQ 70
Q+H +KSGLDSD +V + L+++Y+K G ENA +F++M+ ++ W SII+ Q
Sbjct: 174 LRQLHGNIIKSGLDSDVYVRSALIDIYSKWGESENALYVFNEMVTGDLIVWNSIIAGFAQ 233
Query: 69 NNLGEEAISMFNLMRKSGITCN 4
NN G+EA+++F M+++G N
Sbjct: 234 NNDGDEALNLFKSMKRNGFPAN 255
Score = 75.5 bits (184), Expect = 1e-11
Identities = 39/126 (30%), Positives = 68/126 (53%)
Frame = -2
Query: 381 FSSNRNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSD 202
F R+ R+++ +M G + T + +++ C+A N+ QG QV+ + +G +
Sbjct: 32 FCYQRDLPRAMKAMDAMHKHGIWADSFTYSELIKCCLARNAIEQGKQVYKHLSSNGYQPN 91
Query: 201 CFVSNVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRK 22
F+ N+L+ MY K L+ A LFD+M RNV +WT++ISA L ++A+ M +
Sbjct: 92 IFLINMLLNMYVKFNLLDEALTLFDQMPERNVVSWTTMISAFSNAKLNDKALEFLICMLR 151
Query: 21 SGITCN 4
G+ N
Sbjct: 152 EGVKPN 157
Score = 75.5 bits (184), Expect = 1e-11
Identities = 38/92 (41%), Positives = 55/92 (59%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSN 370
+Q+H ++ K D+ L+ YCK G +EDA VF M KD ++W+ MIAGF+ N
Sbjct: 276 RQVHVHVFKHD--QDLVLNNALLDMYCKCGSLEDANYVFTRMVEKDVISWSTMIAGFAQN 333
Query: 369 RNPQRSLQTFKSMLAEGFPPNYLTLNGVLQAC 274
+ +L+ F+SM G PNY+T+ GVL AC
Sbjct: 334 GYSREALKLFESMKVSGTKPNYITILGVLFAC 365
>ref|XP_006848704.1| hypothetical protein AMTR_s00177p00028500 [Amborella trichopoda]
gi|548852115|gb|ERN10285.1| hypothetical protein
AMTR_s00177p00028500 [Amborella trichopoda]
Length = 296
Score = 140 bits (353), Expect = 4e-31
Identities = 73/210 (34%), Positives = 118/210 (56%), Gaps = 5/210 (2%)
Frame = -2
Query: 627 NLSTKHSVTPQEF-LAQNLEKTSHLNT----KQLHSYLLKSALYSDVYSATRLISSYCKN 463
N + V P +F + L S LN K +H Y++K+ L S+ ++AT L+ Y K
Sbjct: 61 NPMQRAKVKPNQFTMVSLLSGCSRLNYGHQGKWVHCYMIKTGLNSNSFTATALLDMYSKC 120
Query: 462 GFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKSMLAEGFPPNYLTLNGVL 283
G + DAC +FD+M + D V+WTAMI+G++ +P +L+ F+ M PN LT+ VL
Sbjct: 121 GTLIDACAIFDDMHSTDVVSWTAMISGYTQKGSPFDALKLFREMRRLALLPNSLTIASVL 180
Query: 282 QACIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRNVA 103
AC L S QG +H + GL+ + V N L++MY K G ++ + +F+ + +++
Sbjct: 181 SACAKLGSPKQGLSIHKLVIMLGLEGNLLVRNALIDMYGKCGMIDESSCIFESIQEKDLV 240
Query: 102 TWTSIISAHVQNNLGEEAISMFNLMRKSGI 13
TW S+IS + Q G EA+ +F MR + +
Sbjct: 241 TWNSMISGYSQLGFGHEALVLFQGMRSNDV 270
Score = 136 bits (342), Expect = 7e-30
Identities = 69/169 (40%), Positives = 100/169 (59%)
Frame = -2
Query: 507 DVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKSML 328
D + + LI+ Y K M+DA VFDEMP K+ V WT+MIAGF N P+ SL F M
Sbjct: 5 DSFIFSGLINLYMKCSIMDDAKLVFDEMPEKNVVAWTSMIAGFLQNEAPEESLVFFNPMQ 64
Query: 327 AEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLE 148
PN T+ +L C LN G QG VH Y +K+GL+S+ F + L++MY+K G+L
Sbjct: 65 RAKVKPNQFTMVSLLSGCSRLNYGHQGKWVHCYMIKTGLNSNSFTATALLDMYSKCGTLI 124
Query: 147 NACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSGITCNA 1
+AC +FD M +V +WT++IS + Q +A+ +F MR+ + N+
Sbjct: 125 DACAIFDDMHSTDVVSWTAMISGYTQKGSPFDALKLFREMRRLALLPNS 173
>ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like isoform X1 [Glycine max]
Length = 722
Score = 140 bits (353), Expect = 4e-31
Identities = 74/201 (36%), Positives = 119/201 (59%), Gaps = 2/201 (0%)
Frame = -2
Query: 615 KHSVTPQEFLAQNL-EKTSHLNT-KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDAC 442
+ + P EF +L T L + +HS L KS L + L+S+YC++G ++ A
Sbjct: 372 REGIEPDEFTYGSLLAATDSLQVVEMIHSLLCKSGLVK-IEVLNALVSAYCRHGKIKRAF 430
Query: 441 KVFDEMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALN 262
++F +P K ++W ++I+GF N +P + L+ F ++L+ PN +L+ VL C +++
Sbjct: 431 QIFSGVPYKSLISWNSIISGFLMNGHPLQGLEQFSALLSTQVKPNAYSLSLVLSICSSMS 490
Query: 261 SGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIIS 82
+ S G QVH Y L+ G S+ + N LV MYAK GSL+ A ++FD M+ R+ TW +IIS
Sbjct: 491 AMSHGKQVHGYILRHGFSSEVSLGNALVTMYAKCGSLDKALRVFDAMVERDTITWNAIIS 550
Query: 81 AHVQNNLGEEAISMFNLMRKS 19
A+ Q+ GEEA+ F M+ S
Sbjct: 551 AYAQHGRGEEAVCCFEAMQTS 571
Score = 98.2 bits (243), Expect = 2e-18
Identities = 58/182 (31%), Positives = 96/182 (52%), Gaps = 3/182 (1%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMP---NKDFVTWTAMIAGF 379
+ +HS ++KS LI+ Y K G + DAC+VF+E ++D+V++ AMI GF
Sbjct: 197 RHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACEVFEEAEEGGSRDYVSYNAMIDGF 256
Query: 378 SSNRNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDC 199
+S + + F+ M F P +T V+ +C +L +G Q S A+K G
Sbjct: 257 ASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCSSLRAGCQA---QSQAIKMGFVGCV 313
Query: 198 FVSNVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKS 19
V+N ++ MY+ G + +F+ M R+V +W ++S +Q NL EEA+ + MR+
Sbjct: 314 AVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVSMFLQENLEEEAMLSYLKMRRE 373
Query: 18 GI 13
GI
Sbjct: 374 GI 375
Score = 74.3 bits (181), Expect = 3e-11
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 3/165 (1%)
Frame = -2
Query: 507 DVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKSML 328
D YS T L+S+ K +E A KVFD +P W A+I G + N + F+ M
Sbjct: 111 DAYSWTTLLSACAKLDSVEHALKVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMN 170
Query: 327 AEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLE 148
G + T +L C +L G VHS +KSG V N L+ MY K G +
Sbjct: 171 KMGVKADKYTFATMLSLC-SLELFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVV 229
Query: 147 NACKLFDKML---VRNVATWTSIISAHVQNNLGEEAISMFNLMRK 22
+AC++F++ R+ ++ ++I E+A +F M+K
Sbjct: 230 DACEVFEEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDMQK 274
Score = 67.8 bits (164), Expect = 3e-09
Identities = 44/182 (24%), Positives = 82/182 (45%)
Frame = -2
Query: 546 QLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNR 367
Q S +K V +++ Y G + + +F+ M +D V+W M++ F
Sbjct: 299 QAQSQAIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVSMFLQEN 358
Query: 366 NPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSN 187
+ ++ ++ M EG P+ T +L A +L +HS KSGL V N
Sbjct: 359 LEEEAMLSYLKMRREGIEPDEFTYGSLLAATDSLQVVEM---IHSLLCKSGLVK-IEVLN 414
Query: 186 VLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSGITC 7
LV Y + G ++ A ++F + +++ +W SIIS + N + + F+ + + +
Sbjct: 415 ALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSIISGFLMNGHPLQGLEQFSALLSTQVKP 474
Query: 6 NA 1
NA
Sbjct: 475 NA 476
>ref|XP_003518395.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like isoform X1 [Glycine max]
Length = 615
Score = 140 bits (352), Expect = 5e-31
Identities = 78/219 (35%), Positives = 129/219 (58%), Gaps = 2/219 (0%)
Frame = -2
Query: 654 SHFHPNNIRNLSTKHSVTPQEFLA-QNLEKTSHLNTKQLHSYLLKSALYSDVYSATRLIS 478
S FH +L+ + P FL+ NL SH HS L K AL+SD ++A LI+
Sbjct: 109 SLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAA--HSLLFKLALHSDPHTAHSLIT 166
Query: 477 SYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRNPQRSLQTFKSM-LAEGFPPNYL 301
+Y + G + A KVFDE+P++D V+W +MIAG++ + +++ F+ M +GF P+ +
Sbjct: 167 AYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEM 226
Query: 300 TLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKM 121
+L +L AC L G V + ++ G+ + ++ + L+ MYAK G LE+A ++FD M
Sbjct: 227 SLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGM 286
Query: 120 LVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSGITCN 4
R+V TW ++IS + QN + +EAI +F+ M++ +T N
Sbjct: 287 AARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTAN 325
Score = 122 bits (305), Expect = 1e-25
Identities = 61/176 (34%), Positives = 100/176 (56%)
Frame = -2
Query: 543 LHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSNRN 364
+ ++++ + + Y + LIS Y K G +E A ++FD M +D +TW A+I+G++ N
Sbjct: 247 VEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGM 306
Query: 363 PQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNV 184
++ F M + N +TL VL AC + + G Q+ YA + G D FV+
Sbjct: 307 ADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATA 366
Query: 183 LVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSG 16
L++MYAKSGSL+NA ++F M +N A+W ++ISA + +EA+S+F M G
Sbjct: 367 LIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEG 422
Score = 72.4 bits (176), Expect = 1e-10
Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSN 370
KQ+ Y + D++ AT LI Y K+G +++A +VF +MP K+ +W AMI+ +++
Sbjct: 346 KQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAH 405
Query: 369 RNPQRSLQTFKSMLAE--GFPPNYLTLNGVLQACIALNSGSQGTQVHS-YALKSGLDSDC 199
+ +L F+ M E G PN +T G+L AC+ +G ++ + GL
Sbjct: 406 GKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKI 465
Query: 198 FVSNVLVEMYAKSGSLENACKLFDKM 121
+ +V++ A++G L A L KM
Sbjct: 466 EHYSCMVDLLARAGHLYEAWDLIRKM 491
Score = 56.6 bits (135), Expect = 7e-06
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Frame = -2
Query: 423 PNKDFVTWTAMIAGFSSN-RNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQG 247
P+ + + MI ++ N +L F M++ P+ T +C L S S
Sbjct: 83 PHPNDYAFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHA 142
Query: 246 TQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQN 67
HS K L SD ++ L+ YA+ G + +A K+FD++ R+ +W S+I+ + +
Sbjct: 143 CAAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKA 202
Query: 66 NLGEEAISMFNLM-RKSG 16
EA+ +F M R+ G
Sbjct: 203 GCAREAVEVFREMGRRDG 220
>ref|XP_006367240.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Solanum tuberosum]
Length = 622
Score = 139 bits (350), Expect = 8e-31
Identities = 68/182 (37%), Positives = 112/182 (61%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSN 370
K +H+ ++K D+ + LI+ Y K G ++ A KVFDEMP + V+W ++ + N
Sbjct: 68 KSMHTQIIKYGYEVDILTTNMLINMYSKCGIVDFARKVFDEMPQRTLVSWNTLMGSYIQN 127
Query: 369 RNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVS 190
R+ +L+ F M EG N T++GVL AC A + + Q+H +A+K ++S+ FVS
Sbjct: 128 RDEDEALRLFVRMQREGSQVNGFTVSGVLCACAAKFAVLESKQLHGFAIKVSVESNVFVS 187
Query: 189 NVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSGIT 10
L+++YAK G +++A ++FD M RN TW+S+++ +VQN L EEAI F+ ++K G+
Sbjct: 188 TALLDVYAKCGLMKDAFRVFDSMNERNEVTWSSMVAGYVQNELYEEAIMFFHRLQKFGVE 247
Query: 9 CN 4
N
Sbjct: 248 HN 249
Score = 124 bits (312), Expect = 2e-26
Identities = 63/189 (33%), Positives = 111/189 (58%)
Frame = -2
Query: 570 KTSHLNTKQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAM 391
K + L +KQLH + +K ++ S+V+ +T L+ Y K G M+DA +VFD M ++ VTW++M
Sbjct: 162 KFAVLESKQLHGFAIKVSVESNVFVSTALLDVYAKCGLMKDAFRVFDSMNERNEVTWSSM 221
Query: 390 IAGFSSNRNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGL 211
+AG+ N + ++ F + G N TL+ V+ AC A+ + +G + H+ K+G
Sbjct: 222 VAGYVQNELYEEAIMFFHRLQKFGVEHNQFTLSSVISACAAMAALLEGNETHAIVWKTGF 281
Query: 210 DSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNL 31
++ +V++ LV++YA+ GS++ A +F V+N W S+IS +N EA+ +F
Sbjct: 282 GANVYVASSLVDLYARCGSVDEAYIVFSNAEVKNDVIWNSMISGLARNARSLEAMMLFEK 341
Query: 30 MRKSGITCN 4
M+ +G N
Sbjct: 342 MQLAGFYPN 350
Score = 66.2 bits (160), Expect = 9e-09
Identities = 29/98 (29%), Positives = 57/98 (58%)
Frame = -2
Query: 297 LNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKML 118
L+ +Q C + G +H+ +K G + D +N+L+ MY+K G ++ A K+FD+M
Sbjct: 51 LHRAVQECAKQRNAMTGKSMHTQIIKYGYEVDILTTNMLINMYSKCGIVDFARKVFDEMP 110
Query: 117 VRNVATWTSIISAHVQNNLGEEAISMFNLMRKSGITCN 4
R + +W +++ +++QN +EA+ +F M++ G N
Sbjct: 111 QRTLVSWNTLMGSYIQNRDEDEALRLFVRMQREGSQVN 148
Score = 66.2 bits (160), Expect = 9e-09
Identities = 41/163 (25%), Positives = 80/163 (49%), Gaps = 3/163 (1%)
Frame = -2
Query: 558 LNTKQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGF 379
L + H+ + K+ ++VY A+ L+ Y + G +++A VF K+ V W +MI+G
Sbjct: 267 LEGNETHAIVWKTGFGANVYVASSLVDLYARCGSVDEAYIVFSNAEVKNDVIWNSMISGL 326
Query: 378 SSNRNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKS--GLDS 205
+ N ++ F+ M GF PN T VL AC + +G +++ +K L
Sbjct: 327 ARNARSLEAMMLFEKMQLAGFYPNEWTYVSVLSACSHMGLVDKG-RIYFAKMKKEHNLSP 385
Query: 204 DCFVSNVLVEMYAKSGSLENACKLFDKM-LVRNVATWTSIISA 79
+ + + +V++ + G +E A L + M + W S++++
Sbjct: 386 NVYHYSCMVDILGRKGLVEEAKDLIENMPFAATASMWGSVLAS 428
>emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 139 bits (350), Expect = 8e-31
Identities = 69/182 (37%), Positives = 112/182 (61%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSN 370
+Q+H+ +K + DVY + L+ Y + G M+ A VFD++ +K+ V+W A+I+GF+
Sbjct: 172 RQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARK 231
Query: 369 RNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVS 190
+ + +L TF ML GF + T + V + L + QG VH++ +KS FV
Sbjct: 232 GDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVG 291
Query: 189 NVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAISMFNLMRKSGIT 10
N L++MYAKSGS+ +A K+FD++ +++ TW S+++A Q LG+EA+S F MRKSG+
Sbjct: 292 NTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVY 351
Query: 9 CN 4
N
Sbjct: 352 LN 353
Score = 120 bits (302), Expect = 3e-25
Identities = 64/190 (33%), Positives = 104/190 (54%)
Frame = -2
Query: 585 AQNLEKTSHLNTKQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFV 406
++NLE + +++H++L S D + LI YCK + DA VFD+M KD V
Sbjct: 64 SKNLE-----DARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDMV 118
Query: 405 TWTAMIAGFSSNRNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYA 226
+WT++IAG++ N P ++ ML F PN T +L+A A G Q+H+ A
Sbjct: 119 SWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALA 178
Query: 225 LKSGLDSDCFVSNVLVEMYAKSGSLENACKLFDKMLVRNVATWTSIISAHVQNNLGEEAI 46
+K G D +V + L++MYA+ G ++ A +FDK+ +N +W ++IS + GE A+
Sbjct: 179 VKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESAL 238
Query: 45 SMFNLMRKSG 16
F M ++G
Sbjct: 239 MTFAEMLRNG 248
Score = 66.6 bits (161), Expect = 7e-09
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Frame = -2
Query: 549 KQLHSYLLKSALYSDVYSATRLISSYCKNGFMEDACKVFDEMPNKDFVTWTAMIAGFSSN 370
K +H++++KS + L+ Y K+G M DA KVFD + NKD VTW +M+ F+
Sbjct: 273 KWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQY 332
Query: 369 RNPQRSLQTFKSMLAEGFPPNYLTLNGVLQACIALNSGSQGTQVHSYALKSGLDSDCFVS 190
+ ++ F+ M G N +T +L AC +G + + L+ +
Sbjct: 333 GLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHY 392
Query: 189 NVLVEMYAKSGSLENACKLFDKM-LVRNVATWTSIISA 79
+V + ++G L A KM + A W ++++A
Sbjct: 393 VTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAA 430