BLASTX nr result
ID: Ephedra27_contig00016076
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00016076
(372 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002963163.1| hypothetical protein SELMODRAFT_141493 [Sela... 72 8e-11
ref|XP_002981625.1| hypothetical protein SELMODRAFT_114787 [Sela... 72 8e-11
ref|XP_001779367.1| predicted protein [Physcomitrella patens] gi... 59 5e-07
emb|CAN80780.1| hypothetical protein VITISV_011466 [Vitis vinifera] 59 7e-07
ref|XP_003633189.1| PREDICTED: LOW QUALITY PROTEIN: replication ... 59 9e-07
emb|CBI24098.3| unnamed protein product [Vitis vinifera] 59 9e-07
ref|XP_003633177.1| PREDICTED: LOW QUALITY PROTEIN: replication ... 58 1e-06
emb|CBI36562.3| unnamed protein product [Vitis vinifera] 58 1e-06
ref|NP_001141474.1| Replication protein A DNA-binding subunit [Z... 58 1e-06
ref|XP_006280119.1| hypothetical protein CARUB_v10026014mg, part... 57 2e-06
gb|EPB81205.1| hypothetical protein HMPREF1544_12091 [Mucor circ... 57 3e-06
gb|ACG44315.1| replication protein A 70 kDa DNA-binding subunit ... 57 3e-06
gb|AFW77236.1| hypothetical protein ZEAMMB73_509278 [Zea mays] 57 3e-06
ref|NP_001147118.1| replication protein A1 [Zea mays] gi|1956074... 57 3e-06
ref|NP_200908.1| replication protein A 70 kDa DNA-binding subuni... 56 4e-06
emb|CBI15109.3| unnamed protein product [Vitis vinifera] 56 4e-06
ref|XP_002468278.1| hypothetical protein SORBIDRAFT_01g042890 [S... 56 4e-06
ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-... 56 4e-06
dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea... 56 4e-06
emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera] 56 4e-06
>ref|XP_002963163.1| hypothetical protein SELMODRAFT_141493 [Selaginella moellendorffii]
gi|300168431|gb|EFJ35034.1| hypothetical protein
SELMODRAFT_141493 [Selaginella moellendorffii]
Length = 566
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/82 (41%), Positives = 47/82 (57%)
Frame = -3
Query: 370 WYTACVLCKKKYNKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRVKLQDDNSDLWVTVF 191
WYTAC C +K ++ + +++C AC DT + Y + KL D + D WV+ F
Sbjct: 429 WYTACSTCNRKVSE-------DSSRFWCEACQRHFDTASRRYIMLAKLTDHSGDAWVSFF 481
Query: 190 NDTAEQLLGVKASELATLMETD 125
ND AEQ+LGV A ELAT+ D
Sbjct: 482 NDQAEQILGVSADELATIKSQD 503
>ref|XP_002981625.1| hypothetical protein SELMODRAFT_114787 [Selaginella moellendorffii]
gi|300150791|gb|EFJ17440.1| hypothetical protein
SELMODRAFT_114787 [Selaginella moellendorffii]
Length = 566
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/82 (41%), Positives = 47/82 (57%)
Frame = -3
Query: 370 WYTACVLCKKKYNKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRVKLQDDNSDLWVTVF 191
WYTAC C +K ++ + +++C AC DT + Y + KL D + D WV+ F
Sbjct: 429 WYTACSTCNRKVSE-------DSSRFWCEACQRHFDTASRRYIMLAKLTDHSGDAWVSFF 481
Query: 190 NDTAEQLLGVKASELATLMETD 125
ND AEQ+LGV A ELAT+ D
Sbjct: 482 NDQAEQILGVSADELATIKSQD 503
>ref|XP_001779367.1| predicted protein [Physcomitrella patens]
gi|162669165|gb|EDQ55757.1| predicted protein
[Physcomitrella patens]
Length = 451
Score = 59.3 bits (142), Expect = 5e-07
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = -3
Query: 370 WYTACVLCKKKYNKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRVKLQDDNSDLWVTVF 191
WY AC C +K + S Y+C C N D + Y ++ KL D + + WV+ F
Sbjct: 315 WYLACQTCNRKVVEQSSSS------YWCEGCQNHYDKCSRRYIMQAKLSDSSGEAWVSAF 368
Query: 190 NDTAEQLLGVKASELATLMET--DLPAYEDVYYKSRFQ 83
N+ AE LLGV A L+ + D Y++ K+ +Q
Sbjct: 369 NEQAESLLGVSADNLSEMRNQAGDDNQYQNAVRKAMWQ 406
>emb|CAN80780.1| hypothetical protein VITISV_011466 [Vitis vinifera]
Length = 280
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/83 (34%), Positives = 41/83 (49%)
Frame = -3
Query: 370 WYTACVLCKKKYNKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRVKLQDDNSDLWVTVF 191
WY AC C KK G +Y+C C D +L Y + VK+ D + + W+++F
Sbjct: 149 WYRACKTCNKKVTDAIG------SEYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLF 202
Query: 190 NDTAEQLLGVKASELATLMETDL 122
ND AE++ G A EL L L
Sbjct: 203 NDQAERIFGCSADELDKLKSQKL 225
>ref|XP_003633189.1| PREDICTED: LOW QUALITY PROTEIN: replication factor A protein 1-like
[Vitis vinifera]
Length = 390
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/78 (35%), Positives = 40/78 (51%)
Frame = -3
Query: 370 WYTACVLCKKKYNKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRVKLQDDNSDLWVTVF 191
WY AC C KK G +Y+C C D +L Y + VK+ D + + W+++F
Sbjct: 250 WYRACKTCNKKVTDAIG------SEYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLF 303
Query: 190 NDTAEQLLGVKASELATL 137
ND AE++ G A EL L
Sbjct: 304 NDQAERIFGCSADELDKL 321
>emb|CBI24098.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/78 (35%), Positives = 40/78 (51%)
Frame = -3
Query: 370 WYTACVLCKKKYNKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRVKLQDDNSDLWVTVF 191
WY AC C KK G +Y+C C D +L Y + VK+ D + + W+++F
Sbjct: 41 WYRACKTCNKKVTDAIG------SEYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLF 94
Query: 190 NDTAEQLLGVKASELATL 137
ND AE++ G A EL L
Sbjct: 95 NDQAERIFGCSADELDKL 112
>ref|XP_003633177.1| PREDICTED: LOW QUALITY PROTEIN: replication factor A protein 1-like
[Vitis vinifera]
Length = 448
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/78 (35%), Positives = 39/78 (50%)
Frame = -3
Query: 370 WYTACVLCKKKYNKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRVKLQDDNSDLWVTVF 191
WY AC C KK G Y+C C D +L Y + VK+ D + + W+++F
Sbjct: 308 WYRACKTCNKKVTDAIGSG------YWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLF 361
Query: 190 NDTAEQLLGVKASELATL 137
ND AE++ G A EL L
Sbjct: 362 NDQAERIFGCSADELDKL 379
>emb|CBI36562.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/78 (35%), Positives = 39/78 (50%)
Frame = -3
Query: 370 WYTACVLCKKKYNKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRVKLQDDNSDLWVTVF 191
WY AC C KK G Y+C C D +L Y + VK+ D + + W+++F
Sbjct: 41 WYRACKTCNKKVTDAIGSG------YWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLF 94
Query: 190 NDTAEQLLGVKASELATL 137
ND AE++ G A EL L
Sbjct: 95 NDQAERIFGCSADELDKL 112
>ref|NP_001141474.1| Replication protein A DNA-binding subunit [Zea mays]
gi|194704722|gb|ACF86445.1| unknown [Zea mays]
gi|195647462|gb|ACG43199.1| replication protein A 70 kDa
DNA-binding subunit [Zea mays]
gi|413956552|gb|AFW89201.1| Replication protein A
DNA-binding subunit [Zea mays]
Length = 623
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/75 (36%), Positives = 38/75 (50%)
Frame = -3
Query: 370 WYTACVLCKKKYNKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRVKLQDDNSDLWVTVF 191
WY AC C KK + G Y+C C +L Y + +KL D + WV+VF
Sbjct: 485 WYRACTTCNKKVTEAFGSG------YWCEGCQKNYSECSLRYIMVIKLSDPTGEAWVSVF 538
Query: 190 NDTAEQLLGVKASEL 146
N+ AE+++G A EL
Sbjct: 539 NEHAEKIIGCSADEL 553
>ref|XP_006280119.1| hypothetical protein CARUB_v10026014mg, partial [Capsella rubella]
gi|482548823|gb|EOA13017.1| hypothetical protein
CARUB_v10026014mg, partial [Capsella rubella]
Length = 680
Score = 57.4 bits (137), Expect = 2e-06
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Frame = -3
Query: 370 WYTACVLCKKKYNKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRVKLQDDNSDLWVTVF 191
WY AC C KK ++ Y+C C + +L Y + VK+ D + + W++ F
Sbjct: 539 WYQACKTCNKKV------TEALDSGYWCEGCQKKYEECSLRYIMAVKVTDSSGETWISSF 592
Query: 190 NDTAEQLLGVKASELATLMETDLPAYEDVYYKSRFQAI--NTHVI-INVTPFEERDHKQ 23
ND AE++LG A EL L + E Y++R + ++HV ++VT E K+
Sbjct: 593 NDEAEKILGCSADELNKLRSEEGEVNE---YQTRLKEATWSSHVFRVSVTQNEYNGEKR 648
>gb|EPB81205.1| hypothetical protein HMPREF1544_12091 [Mucor circinelloides f.
circinelloides 1006PhL]
Length = 597
Score = 57.0 bits (136), Expect = 3e-06
Identities = 33/101 (32%), Positives = 48/101 (47%)
Frame = -3
Query: 367 YTACVLCKKKYNKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRVKLQDDNSDLWVTVFN 188
Y C CKKK E + C C T + Y L + ++D S +++ VF+
Sbjct: 462 YPGCPECKKKITL-------ESNGWRCEKCQKTYASPDYRYILTLSVEDATSQIYMNVFD 514
Query: 187 DTAEQLLGVKASELATLMETDLPAYEDVYYKSRFQAINTHV 65
D L+G+ A+EL L ETD A + + KS FQ+ N V
Sbjct: 515 DQGNTLMGMSANELTALRETDATASQVAFNKSLFQSYNLKV 555
>gb|ACG44315.1| replication protein A 70 kDa DNA-binding subunit [Zea mays]
Length = 618
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/75 (36%), Positives = 38/75 (50%)
Frame = -3
Query: 370 WYTACVLCKKKYNKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRVKLQDDNSDLWVTVF 191
WY AC C KK + G Y+C C +L Y + VK+ D + WV+VF
Sbjct: 480 WYRACKTCNKKVTETFGSG------YWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVF 533
Query: 190 NDTAEQLLGVKASEL 146
N+ AE+++G A EL
Sbjct: 534 NEHAEKIIGCSADEL 548
>gb|AFW77236.1| hypothetical protein ZEAMMB73_509278 [Zea mays]
Length = 464
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/75 (34%), Positives = 40/75 (53%)
Frame = -3
Query: 370 WYTACVLCKKKYNKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRVKLQDDNSDLWVTVF 191
WY AC+ C KK + + Y+C C +L Y + +K+ D S+ WV+VF
Sbjct: 319 WYRACMTCNKKVTEVF------RSGYWCEGCQKNDSECSLRYIMVIKVSDPTSEAWVSVF 372
Query: 190 NDTAEQLLGVKASEL 146
N+ AE+++G A EL
Sbjct: 373 NEHAEKIIGCNADEL 387
>ref|NP_001147118.1| replication protein A1 [Zea mays] gi|195607412|gb|ACG25536.1|
replication protein A 70 kDa DNA-binding subunit [Zea
mays]
Length = 618
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/75 (34%), Positives = 38/75 (50%)
Frame = -3
Query: 370 WYTACVLCKKKYNKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRVKLQDDNSDLWVTVF 191
WY AC C KK + G Y+C C +L Y + +K+ D + WV+VF
Sbjct: 480 WYRACKTCNKKVTETFGSG------YWCEGCQKNDSECSLRYIMVIKVSDPTGEAWVSVF 533
Query: 190 NDTAEQLLGVKASEL 146
N+ AE+++G A EL
Sbjct: 534 NEHAEKIIGCSADEL 548
>ref|NP_200908.1| replication protein A 70 kDa DNA-binding subunit D [Arabidopsis
thaliana] gi|75171651|sp|Q9FME0.1|RFA1D_ARATH RecName:
Full=Replication protein A 70 kDa DNA-binding subunit D;
Short=AtRPA70D; AltName: Full=AtRPA1-4; AltName:
Full=Replication factor A protein 1D; AltName:
Full=Replication protein A 1D; Short=AtRPA1D
gi|10177323|dbj|BAB10649.1| replication protein A1
[Arabidopsis thaliana] gi|28393124|gb|AAO41995.1|
putative RNA helicase [Arabidopsis thaliana]
gi|332010026|gb|AED97409.1| Replication factor-A protein
1-like protein [Arabidopsis thaliana]
Length = 629
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/78 (34%), Positives = 40/78 (51%)
Frame = -3
Query: 370 WYTACVLCKKKYNKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRVKLQDDNSDLWVTVF 191
WY AC C KK ++ Y+C C + +L Y + VK+ D + + W++ F
Sbjct: 488 WYQACKTCNKKV------TEALDSGYWCEGCQRKYEECSLRYIMAVKVTDSSGETWISSF 541
Query: 190 NDTAEQLLGVKASELATL 137
ND AE++LG A EL L
Sbjct: 542 NDEAEKILGCSADELNKL 559
>emb|CBI15109.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/78 (34%), Positives = 39/78 (50%)
Frame = -3
Query: 370 WYTACVLCKKKYNKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRVKLQDDNSDLWVTVF 191
WY AC C KK G Y+C C D +L Y + VK+ D + + W+++F
Sbjct: 462 WYRACKTCNKKVTDAIGSG------YWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLF 515
Query: 190 NDTAEQLLGVKASELATL 137
N+ AE++ G A EL L
Sbjct: 516 NEQAERMFGCSADELDKL 533
>ref|XP_002468278.1| hypothetical protein SORBIDRAFT_01g042890 [Sorghum bicolor]
gi|241922132|gb|EER95276.1| hypothetical protein
SORBIDRAFT_01g042890 [Sorghum bicolor]
Length = 623
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/75 (34%), Positives = 38/75 (50%)
Frame = -3
Query: 370 WYTACVLCKKKYNKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRVKLQDDNSDLWVTVF 191
WY AC C KK + G Y+C C +L Y + +K+ D + WV+VF
Sbjct: 485 WYRACKTCNKKVTEAFGSG------YWCEGCQKNDSECSLRYIMVLKISDPTGEAWVSVF 538
Query: 190 NDTAEQLLGVKASEL 146
N+ AE+++G A EL
Sbjct: 539 NEHAEKIIGCSADEL 553
>ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
1 [Vitis vinifera]
Length = 625
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/78 (34%), Positives = 39/78 (50%)
Frame = -3
Query: 370 WYTACVLCKKKYNKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRVKLQDDNSDLWVTVF 191
WY AC C KK G Y+C C D +L Y + VK+ D + + W+++F
Sbjct: 485 WYRACKTCNKKVTDAIGSG------YWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLF 538
Query: 190 NDTAEQLLGVKASELATL 137
N+ AE++ G A EL L
Sbjct: 539 NEQAERMFGCSADELDKL 556
>dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea nil]
Length = 604
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/82 (31%), Positives = 41/82 (50%)
Frame = -3
Query: 370 WYTACVLCKKKYNKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRVKLQDDNSDLWVTVF 191
WY AC C KK + G Y+C C +L Y + +++ D + + W++VF
Sbjct: 464 WYRACKTCNKKVTEAIGSG------YWCEGCQKNDTDCSLRYIVAMRVSDTSGEAWLSVF 517
Query: 190 NDTAEQLLGVKASELATLMETD 125
N+ AE+++G A EL L D
Sbjct: 518 NEQAEKIIGCSADELDRLRSQD 539
>emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]
Length = 634
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/78 (34%), Positives = 39/78 (50%)
Frame = -3
Query: 370 WYTACVLCKKKYNKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRVKLQDDNSDLWVTVF 191
WY AC C KK G Y+C C D +L Y + VK+ D + + W+++F
Sbjct: 494 WYRACKTCNKKVTDAIGSG------YWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLF 547
Query: 190 NDTAEQLLGVKASELATL 137
N+ AE++ G A EL L
Sbjct: 548 NEQAERMFGCSADELDKL 565