BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00015921
         (1670 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006853609.1| hypothetical protein AMTR_s00056p00043140 [A...   486   e-135
ref|XP_004503464.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   481   e-133
gb|EMJ04984.1| hypothetical protein PRUPE_ppa001872mg [Prunus pe...   478   e-132
gb|EOY30694.1| RNA-binding CRS1 / YhbY domain-containing protein...   477   e-132
emb|CBI28022.3| unnamed protein product [Vitis vinifera]              474   e-131
ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chlorop...   474   e-131
gb|EXB59798.1| CRS2-associated factor 1 [Morus notabilis]             473   e-130
ref|XP_002535109.1| conserved hypothetical protein [Ricinus comm...   473   e-130
ref|XP_006338151.1| PREDICTED: CRS2-associated factor 1, chlorop...   472   e-130
ref|XP_004287455.1| PREDICTED: CRS2-associated factor 1, chlorop...   471   e-130
ref|XP_004239268.1| PREDICTED: CRS2-associated factor 1, chlorop...   471   e-130
ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]...   471   e-130
ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]...   471   e-130
ref|XP_006494323.1| PREDICTED: CRS2-associated factor 1, chlorop...   470   e-130
ref|XP_006451251.1| hypothetical protein CICLE_v100106541mg, par...   470   e-130
ref|XP_006389456.1| hypothetical protein POPTR_0024s00430g [Popu...   469   e-129
ref|XP_002332503.1| predicted protein [Populus trichocarpa]           469   e-129
ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chlorop...   466   e-128
ref|XP_003532480.1| PREDICTED: CRS2-associated factor 1, chlorop...   463   e-128
ref|XP_002886005.1| hypothetical protein ARALYDRAFT_480467 [Arab...   463   e-128

>ref|XP_006853609.1| hypothetical protein AMTR_s00056p00043140 [Amborella trichopoda]
            gi|548857270|gb|ERN15076.1| hypothetical protein
            AMTR_s00056p00043140 [Amborella trichopoda]
          Length = 977

 Score =  486 bits (1252), Expect = e-135
 Identities = 237/396 (59%), Positives = 297/396 (75%), Gaps = 7/396 (1%)
 Frame = -2

Query: 1228 GVVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPP 1052
            G  +G HGV YK+  APFEFQYSYTETPKVKPL LRE  ++PFGP+TM RPWTG+APLPP
Sbjct: 300  GFSVGEHGVSYKLVNAPFEFQYSYTETPKVKPLALREPPFMPFGPSTMPRPWTGRAPLPP 359

Query: 1051 SKKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLD 872
            SKKK  EFDSFK PPP+KKGVK VQ PGP+ PG  P+YV+SREEILGEPLT++EV  L+ 
Sbjct: 360  SKKKLPEFDSFKLPPPHKKGVKPVQAPGPYLPGTGPRYVKSREEILGEPLTTEEVNSLIR 419

Query: 871  SCKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGK 692
            +C +S RQL++GRDGLTHNML+NIH HWKR R CKI+C GV TVDMDN+CE+LEEKTGGK
Sbjct: 420  TCLKSKRQLNMGRDGLTHNMLDNIHAHWKRLRACKIKCKGVCTVDMDNVCEQLEEKTGGK 479

Query: 691  IIHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEAIELRRKG 512
            II+R GG+LYLFRGRNYNY+ R  FPLMLWRP+TPVYP+LI   P GLT  EA E+R+KG
Sbjct: 480  IIYRRGGVLYLFRGRNYNYRLRPRFPLMLWRPITPVYPRLIPLVPEGLTLEEAKEMRKKG 539

Query: 511  RLVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLL 332
            R VPPIC L +NGVY +LV ++++AFE CELVRI+C  L  SD+K+I  KLKD VPCVL+
Sbjct: 540  RKVPPICKLAKNGVYVDLVKNVKEAFEECELVRINCQGLNASDYKKIGAKLKDIVPCVLI 599

Query: 331  SFSDQHILLWRGKNWVSLHERIELSTEEITYQVSDNESE------NMTAISNSDVITTTD 170
            SF ++HIL+WRG++W S   ++E  +E  T ++++  SE       +  ISN D   T+ 
Sbjct: 600  SFENEHILMWRGRDWTSSPSKLENDSE--TLEIAEVSSETGAPDPQILPISNPD---TSS 654

Query: 169  DILDKNIKESVRTSATLTVTENNIFPTENVTAETIS 62
              LD   ++   TS+     ++N     N++   +S
Sbjct: 655  SALD--TEKCSTTSSQPNQVDSNCIEPNNISMLKVS 688


>ref|XP_004503464.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 1,
            chloroplastic-like [Cicer arietinum]
          Length = 706

 Score =  481 bits (1239), Expect = e-133
 Identities = 217/314 (69%), Positives = 261/314 (83%), Gaps = 1/314 (0%)
 Frame = -2

Query: 1225 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLRE-NYLPFGPTTMERPWTGKAPLPPS 1049
            V I   G+ Y + GAPFEF+YSYTETPK KPLKLRE  +LPFGP TM RPWTG+ PLPPS
Sbjct: 73   VKISDDGLSYVIEGAPFEFKYSYTETPKAKPLKLREPGFLPFGPVTMPRPWTGRPPLPPS 132

Query: 1048 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 869
            KKK +EFDSF  PPP+KKGVK VQ PGP+ PG  PKYVRSREE+LGEPLT +E+K L+ S
Sbjct: 133  KKKLKEFDSFVLPPPHKKGVKPVQSPGPYLPGTSPKYVRSREEVLGEPLTKEEIKVLVQS 192

Query: 868  CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 689
            C +S RQL++GRDG THNML+NIH HWKRRRVCKI+CLGV TVDMDN+C +LEEKTGGK+
Sbjct: 193  CLKSSRQLNMGRDGFTHNMLDNIHAHWKRRRVCKIKCLGVCTVDMDNVCHQLEEKTGGKV 252

Query: 688  IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEAIELRRKGR 509
            I+R GG+LYLFRGRNYNYKTR +FPLMLW+P+ PVYPKLIQ+ P GLT  EA E+R+KGR
Sbjct: 253  IYRRGGVLYLFRGRNYNYKTRPLFPLMLWKPVPPVYPKLIQRVPEGLTLEEATEMRQKGR 312

Query: 508  LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 329
             + PIC +G+NGVY NLV ++R+AFE CELVRI+C  L  SD+++I  KL+D VPC LLS
Sbjct: 313  TLTPICKIGKNGVYFNLVKNVREAFEECELVRINCQGLNKSDYRKIGAKLRDLVPCTLLS 372

Query: 328  FSDQHILLWRGKNW 287
            + ++HIL+WRG+NW
Sbjct: 373  YENEHILMWRGRNW 386


>gb|EMJ04984.1| hypothetical protein PRUPE_ppa001872mg [Prunus persica]
          Length = 750

 Score =  478 bits (1231), Expect = e-132
 Identities = 217/316 (68%), Positives = 263/316 (83%), Gaps = 1/316 (0%)
 Frame = -2

Query: 1225 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1049
            + +G  G+ Y + GAPFEF+YSYTETPKVKPLKLRE  Y PFGPTTM RPWTG+APLPPS
Sbjct: 149  ISVGDDGLSYVIDGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMARPWTGRAPLPPS 208

Query: 1048 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 869
            KKK +EFDSF+ PPP+KKGVK VQ PGP+ PG  PKYV+SR+EILG+PLT +EVKEL+  
Sbjct: 209  KKKLKEFDSFQLPPPHKKGVKPVQSPGPYLPGSGPKYVKSRDEILGDPLTPEEVKELVKG 268

Query: 868  CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 689
            C ++ RQL++GRDG THNML+NIH HWKRRRVCKI+C GV TVDMDN+CE++EEKTGGKI
Sbjct: 269  CIKTRRQLNMGRDGFTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCEQIEEKTGGKI 328

Query: 688  IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEAIELRRKGR 509
            I+R GG++YLFRGRNYNYKTR  FPLMLWRP+TPVYP+L+Q+ P GLT  EA E+R+KGR
Sbjct: 329  IYRKGGVIYLFRGRNYNYKTRPQFPLMLWRPITPVYPRLVQRAPEGLTLEEATEMRKKGR 388

Query: 508  LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 329
             + PIC LG+NGVY  L  + R+AFE CELVRI+CT +  SD+++I  KLKD VPCVL+S
Sbjct: 389  NLIPICKLGKNGVYSELAKNAREAFEECELVRINCTGMNGSDYRKIGAKLKDLVPCVLIS 448

Query: 328  FSDQHILLWRGKNWVS 281
            F  +HIL+WRG+ W S
Sbjct: 449  FELEHILMWRGREWKS 464


>gb|EOY30694.1| RNA-binding CRS1 / YhbY domain-containing protein, putative
            [Theobroma cacao]
          Length = 767

 Score =  477 bits (1228), Expect = e-132
 Identities = 219/343 (63%), Positives = 278/343 (81%), Gaps = 1/343 (0%)
 Frame = -2

Query: 1225 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1049
            V IG  G+ + + GAPFEF+YSYTETPKVKP+KLRE  Y PFGP+TM RPWTG+APLPPS
Sbjct: 142  VSIGDDGISFVIDGAPFEFKYSYTETPKVKPIKLREPPYSPFGPSTMPRPWTGRAPLPPS 201

Query: 1048 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 869
            KKK +EFDSF  PPPNKKGVK +Q PGP+ PG  P+YV+SREEILGEPL ++EVKEL++ 
Sbjct: 202  KKKMKEFDSFVLPPPNKKGVKPIQKPGPYLPGTGPRYVQSREEILGEPLNAEEVKELVNG 261

Query: 868  CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 689
            C +S RQL++GRDGLTHNML+NIH HWKRRRVCKI+C GV TVDMDN+CE+LEE+TGGK+
Sbjct: 262  CLKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCEQLEERTGGKV 321

Query: 688  IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEAIELRRKGR 509
            I+R GG+L+LFRGRNYNYKTR  FPLMLW+P+TP+YP+LIQK P GLT  E  E+R+KGR
Sbjct: 322  IYRRGGVLFLFRGRNYNYKTRPRFPLMLWKPVTPMYPRLIQKAPEGLTVEEMSEMRKKGR 381

Query: 508  LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 329
             + PIC L +NGVY +LV ++R+AFE CELVR++C  +K SD+++I  KLK+ VPCVL+S
Sbjct: 382  KLMPICKLAKNGVYSDLVKNVREAFEECELVRVNCEGIKGSDYRKIGAKLKELVPCVLIS 441

Query: 328  FSDQHILLWRGKNWVSLHERIELSTEEITYQVSDNESENMTAI 200
            F ++ IL+WRG+NW S   +   ++      V + ++EN T+I
Sbjct: 442  FENESILMWRGRNWKSSFLKPAFNS-----GVEERDAENATSI 479


>emb|CBI28022.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  474 bits (1221), Expect = e-131
 Identities = 230/389 (59%), Positives = 286/389 (73%), Gaps = 13/389 (3%)
 Frame = -2

Query: 1231 RGVVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLP 1055
            RG+ IG  GV Y VPG PFE +YSYTETPKVKP+ LRE  +LPFGP TM RPWTG+APLP
Sbjct: 134  RGISIGEDGVSYMVPGVPFELRYSYTETPKVKPIALREPPFLPFGPDTMPRPWTGRAPLP 193

Query: 1054 PSKKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELL 875
            PSKKK +EFDSF+ PPP KK VK VQ PGPF PG  P+YVRSREEILGEPLT +E+KEL+
Sbjct: 194  PSKKKLKEFDSFQLPPPGKKRVKPVQAPGPFLPGSGPRYVRSREEILGEPLTEEEIKELV 253

Query: 874  DSCKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGG 695
              C +S RQL++GRDGLTHNML+NIH HWKRRRVCKI+C GV TVDMDN+ ++LEEKTGG
Sbjct: 254  QGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGG 313

Query: 694  KIIHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEAIELRRK 515
            K+I+  GG+L+LFRGRNYNY+ R  FPLMLW+P+TPVYP+L+Q+ P GLT  EA  +R+K
Sbjct: 314  KVIYGKGGVLFLFRGRNYNYRNRPRFPLMLWKPVTPVYPRLVQRAPEGLTLEEAGAMRKK 373

Query: 514  GRLVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVL 335
            GR + PIC L +NGVY +LV+++R+AFE CELVRI+C  L  SD+++I  KLKD VPCVL
Sbjct: 374  GRKLIPICKLAKNGVYTDLVNNVREAFEECELVRINCQGLNASDYRKIGAKLKDLVPCVL 433

Query: 334  LSFSDQHILLWRGKNWVSLHERIELSTEEITYQVSDNESE------------NMTAISNS 191
            +SF  +HIL+WRG +W  LH + E   +E   + SDN SE            + +  S  
Sbjct: 434  ISFEHEHILMWRGSDWKFLHPKPEDGCKEA--KESDNNSEASIPPPFEGQELSASCSSKI 491

Query: 190  DVITTTDDILDKNIKESVRTSATLTVTEN 104
             V  T+ D+LD      +     +  TE+
Sbjct: 492  SVKDTSLDMLDTIASPVINEDVAMDKTED 520


>ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Vitis vinifera]
          Length = 752

 Score =  474 bits (1221), Expect = e-131
 Identities = 230/389 (59%), Positives = 286/389 (73%), Gaps = 13/389 (3%)
 Frame = -2

Query: 1231 RGVVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLP 1055
            RG+ IG  GV Y VPG PFE +YSYTETPKVKP+ LRE  +LPFGP TM RPWTG+APLP
Sbjct: 134  RGISIGEDGVSYMVPGVPFELRYSYTETPKVKPIALREPPFLPFGPDTMPRPWTGRAPLP 193

Query: 1054 PSKKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELL 875
            PSKKK +EFDSF+ PPP KK VK VQ PGPF PG  P+YVRSREEILGEPLT +E+KEL+
Sbjct: 194  PSKKKLKEFDSFQLPPPGKKRVKPVQAPGPFLPGSGPRYVRSREEILGEPLTEEEIKELV 253

Query: 874  DSCKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGG 695
              C +S RQL++GRDGLTHNML+NIH HWKRRRVCKI+C GV TVDMDN+ ++LEEKTGG
Sbjct: 254  QGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGG 313

Query: 694  KIIHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEAIELRRK 515
            K+I+  GG+L+LFRGRNYNY+ R  FPLMLW+P+TPVYP+L+Q+ P GLT  EA  +R+K
Sbjct: 314  KVIYGKGGVLFLFRGRNYNYRNRPRFPLMLWKPVTPVYPRLVQRAPEGLTLEEAGAMRKK 373

Query: 514  GRLVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVL 335
            GR + PIC L +NGVY +LV+++R+AFE CELVRI+C  L  SD+++I  KLKD VPCVL
Sbjct: 374  GRKLIPICKLAKNGVYTDLVNNVREAFEECELVRINCQGLNASDYRKIGAKLKDLVPCVL 433

Query: 334  LSFSDQHILLWRGKNWVSLHERIELSTEEITYQVSDNESE------------NMTAISNS 191
            +SF  +HIL+WRG +W  LH + E   +E   + SDN SE            + +  S  
Sbjct: 434  ISFEHEHILMWRGSDWKFLHPKPEDGCKEA--KESDNNSEASIPPPFEGQELSASCSSKI 491

Query: 190  DVITTTDDILDKNIKESVRTSATLTVTEN 104
             V  T+ D+LD      +     +  TE+
Sbjct: 492  SVKDTSLDMLDTIASPVINEDVAMDKTED 520


>gb|EXB59798.1| CRS2-associated factor 1 [Morus notabilis]
          Length = 792

 Score =  473 bits (1216), Expect = e-130
 Identities = 220/370 (59%), Positives = 285/370 (77%), Gaps = 1/370 (0%)
 Frame = -2

Query: 1225 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1049
            V +G  GV Y + GAPFEF+YSYTETPK +P+KLRE  Y PFGPTTM RPWTG+APLPPS
Sbjct: 156  VRVGEDGVSYVIDGAPFEFKYSYTETPKAQPVKLREAPYAPFGPTTMPRPWTGRAPLPPS 215

Query: 1048 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 869
            KKK +EFDSF+  PP+KKGVK VQ PGPF PG  PKYV SREEILGEPLT +E+K+L++ 
Sbjct: 216  KKKLKEFDSFRLSPPHKKGVKPVQAPGPFLPGSGPKYVMSREEILGEPLTEEEIKDLIEG 275

Query: 868  CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 689
            C+++ RQ+++GRDGLTHNML+NIH HWKRRRVCKI+C GV TVDMDN+ E+LEE+TGGKI
Sbjct: 276  CRKTKRQMNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKEQLEERTGGKI 335

Query: 688  IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEAIELRRKGR 509
            I+  GG+++LFRGRNYNY+TR  FPLMLW+P+TPVYP+L+++ P GLT  EA E+R+KG 
Sbjct: 336  IYGKGGVIFLFRGRNYNYRTRPRFPLMLWKPVTPVYPRLVKRVPEGLTLEEAKEMRKKGH 395

Query: 508  LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 329
             + PIC LG+NGVYHNLV  +R+AFE CELVRI+C  +  SD+++I  KLKD VPCVLLS
Sbjct: 396  KLMPICKLGKNGVYHNLVKHVREAFEECELVRINCQGMNGSDYRKIGAKLKDLVPCVLLS 455

Query: 328  FSDQHILLWRGKNWVSLHERIELSTEEITYQVSDNESENMTAISNSDVITTTDDILDKNI 149
            F+ +HIL+WRG +W S   ++    +E         +    ++   +V  +T  + D ++
Sbjct: 456  FAFEHILIWRGCDWKSSLPKLVKDRDEAKESDVQIVTSVAPSVEGEEVAMSTGSVNDASL 515

Query: 148  KESVRTSATL 119
             E + T++TL
Sbjct: 516  -ELISTTSTL 524


>ref|XP_002535109.1| conserved hypothetical protein [Ricinus communis]
            gi|223524018|gb|EEF27274.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 748

 Score =  473 bits (1216), Expect = e-130
 Identities = 221/361 (61%), Positives = 284/361 (78%), Gaps = 9/361 (2%)
 Frame = -2

Query: 1225 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1049
            V +   G+ + V GAPFEF+YSYTETPK KP+KLRE  + PFGPTTM RPWTG+APLPPS
Sbjct: 144  VKLSEDGLSFVVDGAPFEFKYSYTETPKAKPIKLREAPFSPFGPTTMGRPWTGRAPLPPS 203

Query: 1048 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 869
            KKK REFDSFK PPP+KKGVK VQ PGPF PG  P+YV SREEILGEPLT++EVK L++ 
Sbjct: 204  KKKLREFDSFKLPPPDKKGVKPVQKPGPFLPGAGPRYVYSREEILGEPLTTEEVKILIEG 263

Query: 868  CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 689
            C ++ RQL++GRDGLTHNML+NIH HWKRRRVCKI+C+GV TVDMDN+C++LEE+TGGK+
Sbjct: 264  CLKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCMGVCTVDMDNVCQQLEERTGGKV 323

Query: 688  IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEAIELRRKGR 509
            I+R GG++YLFRGRNYNY+TR  FPLMLW+P+TPVYP+LI++ P GLT  EA E+RRKGR
Sbjct: 324  IYRKGGVVYLFRGRNYNYRTRPRFPLMLWKPVTPVYPRLIKRAPEGLTLEEASEMRRKGR 383

Query: 508  LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 329
             + PIC L +NGVY NLV ++R+AFE CELVRIDC  +  SD++++  KLK+ VPC+L+S
Sbjct: 384  KLIPICKLAKNGVYCNLVKEVREAFEECELVRIDCQGVNGSDYRKVGAKLKELVPCLLIS 443

Query: 328  FSDQHILLWRGKNWVS-----LHERIELSTEEI---TYQVSDNESENMTAISNSDVITTT 173
            F  +HIL+WRG++W S     +++ +E    ++   T   S  E + M  +S+ D ++  
Sbjct: 444  FEHEHILMWRGRDWKSSMIKPVNDSVEAIGSDVNSATSIASVLEDQIMEIVSHEDGLSKP 503

Query: 172  D 170
            D
Sbjct: 504  D 504


>ref|XP_006338151.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Solanum
            tuberosum]
          Length = 764

 Score =  472 bits (1215), Expect = e-130
 Identities = 234/407 (57%), Positives = 296/407 (72%), Gaps = 1/407 (0%)
 Frame = -2

Query: 1225 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLRENYL-PFGPTTMERPWTGKAPLPPS 1049
            + +  +GV Y+ P APF +QYSYTETPK+KP KLRE  + PFGP +M+RPWTG+ PLPPS
Sbjct: 144  IKVDENGVCYEFPEAPFVYQYSYTETPKLKPKKLREPLVSPFGPESMQRPWTGRKPLPPS 203

Query: 1048 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 869
            KKKR EFDSF+ PPP+KKGVK VQ PGPF  G  PKYV+SREE+LGEPLT +E+ EL++S
Sbjct: 204  KKKRPEFDSFQLPPPHKKGVKPVQAPGPFLAGSGPKYVKSREEVLGEPLTKEEMMELINS 263

Query: 868  CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 689
            CK++ RQ++IGRDGLTHNMLENIH HWKR+RVCKI+C GV TVDMDN+CEKLEEKTGGKI
Sbjct: 264  CKKTTRQMNIGRDGLTHNMLENIHAHWKRKRVCKIKCKGVCTVDMDNVCEKLEEKTGGKI 323

Query: 688  IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEAIELRRKGR 509
            I+  GG++YLFRGRNYNYKTR  FPLMLWRP+TPVYP+L+Q+ P GLT  EA  +R+KGR
Sbjct: 324  IYHKGGLIYLFRGRNYNYKTRPRFPLMLWRPVTPVYPRLVQRVPEGLTLEEATLMRKKGR 383

Query: 508  LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 329
             + PIC L +NGVY +LV ++R+AFE CELV I+C  L PSD+++I  KLKD VPCVL+S
Sbjct: 384  NLIPICKLAKNGVYCDLVKNVREAFEACELVSINCQGLNPSDYRKIGAKLKDLVPCVLIS 443

Query: 328  FSDQHILLWRGKNWVSLHERIELSTEEITYQVSDNESENMTAISNSDVITTTDDILDKNI 149
            F  +HIL+WRG++WVS      L  +       DN+         SD    T+  L+  +
Sbjct: 444  FEQEHILMWRGRDWVS-----SLPEDR------DND---------SDKAANTNRSLEVQV 483

Query: 148  KESVRTSATLTVTENNIFPTENVTAETISTMSKQHAALRNFDSSVQD 8
              S   S  L +TE N   T N++A T     ++   +R  D + +D
Sbjct: 484  VASTSGSPRLPITEMN---TCNLSANTFPLGEEESEYVRR-DGTKED 526


>ref|XP_004287455.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Fragaria
            vesca subsp. vesca]
          Length = 804

 Score =  471 bits (1213), Expect = e-130
 Identities = 224/377 (59%), Positives = 285/377 (75%), Gaps = 4/377 (1%)
 Frame = -2

Query: 1225 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1049
            + IG  G+ Y + GAPFEF+YSYTETPK KP+KLRE  Y PFGPTTM RPWTG+APLP S
Sbjct: 149  ISIGDDGLSYVIDGAPFEFKYSYTETPKQKPIKLREPPYAPFGPTTMGRPWTGRAPLPAS 208

Query: 1048 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 869
            KKK +EFDSF+ PPP+KKGV+ VQ PGP+ PG  PKYV+SREEILG+PLT  EVK+L++ 
Sbjct: 209  KKKMKEFDSFQLPPPHKKGVRPVQSPGPYLPGSGPKYVKSREEILGDPLTDQEVKDLVNG 268

Query: 868  CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 689
            C ++ RQL++GRDGLTHNML+NIH HWKRRRVCKI+C GV TVDM+N+C++LEE+TGGKI
Sbjct: 269  CIKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMENVCQQLEERTGGKI 328

Query: 688  IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEAIELRRKGR 509
            I+R GG+++LFRGRNYNYKTR  FPLMLWRP+TPVYP+LIQ+ P GLT  EA E+R+KGR
Sbjct: 329  IYRRGGVIFLFRGRNYNYKTRPRFPLMLWRPITPVYPRLIQRAPEGLTVEEATEMRKKGR 388

Query: 508  LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 329
             + PI  LG+NGVY +LV ++R+AFE CELVRIDC  +  SD+++I  KLKD VPCVL+S
Sbjct: 389  DLIPIRKLGKNGVYSDLVDNVREAFEECELVRIDCQGMNGSDYRKIGAKLKDLVPCVLIS 448

Query: 328  FSDQHILLWRGKNWVSLHERIELSTEEITYQVSDNESENMTAISNSDVITT---TDDILD 158
            F  + IL+WRG+ W S     E + +E+     D+      ++   D  T    T  + D
Sbjct: 449  FERESILMWRGREWKSSLVNPESNLKEVKESNVDDSPSIALSLEGEDASTVCAFTGSVKD 508

Query: 157  KNIKESVRTSATLTVTE 107
             N  E + TS + ++ E
Sbjct: 509  AN-PEMIDTSISSSIAE 524


>ref|XP_004239268.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Solanum
            lycopersicum]
          Length = 766

 Score =  471 bits (1213), Expect = e-130
 Identities = 230/387 (59%), Positives = 289/387 (74%), Gaps = 1/387 (0%)
 Frame = -2

Query: 1225 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLRENYL-PFGPTTMERPWTGKAPLPPS 1049
            + +  +GV Y+ P APF +QYSYTETPKVKP KLRE  + PFGP +M+RPWTG+ PLPPS
Sbjct: 144  IKVDENGVCYEFPEAPFVYQYSYTETPKVKPRKLREPLVSPFGPESMQRPWTGRKPLPPS 203

Query: 1048 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 869
            KKK  EFDSF+ PPP+KKGVK VQ PGPF  G  PKYV+SREE+LGEPLT +E+ EL++S
Sbjct: 204  KKKLPEFDSFQLPPPHKKGVKPVQAPGPFLAGSGPKYVKSREEVLGEPLTKEEMMELINS 263

Query: 868  CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 689
            CK++ RQ++IGRDGLTHNMLENIH HWKR+RVCKI+C GV TVDMDN+CEKLEEKTGGKI
Sbjct: 264  CKKTTRQMNIGRDGLTHNMLENIHAHWKRKRVCKIKCKGVCTVDMDNVCEKLEEKTGGKI 323

Query: 688  IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEAIELRRKGR 509
            I+  GG++YLFRGRNYNY TR  FPLMLWRP+TPVYP+L+++ P GLT  EA E+R+KGR
Sbjct: 324  IYHKGGVIYLFRGRNYNYMTRPRFPLMLWRPVTPVYPRLVRRVPEGLTLEEATEMRKKGR 383

Query: 508  LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 329
             + PIC L +NGVY +LV ++R+AFE CELV I+C  L PSD+++I  KLKD VPCVL+S
Sbjct: 384  NLIPICKLAKNGVYCDLVKNVREAFEACELVCINCQGLNPSDYRKIGAKLKDLVPCVLIS 443

Query: 328  FSDQHILLWRGKNWVSLHERIELSTEEITYQVSDNESENMTAISNSDVITTTDDILDKNI 149
            F  +HIL+WRG++WVS       S  E      D ++  +   S S     T+   +  +
Sbjct: 444  FEQEHILIWRGRDWVS-------SLPE------DGDNPEIREGSESVNAANTNRSFEVQV 490

Query: 148  KESVRTSATLTVTENNIFPTENVTAET 68
              S   S++L VTE N   T N++A T
Sbjct: 491  VASTAGSSSLPVTEVN---TYNLSANT 514


>ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]
            gi|355524767|gb|AET05221.1| CRS2-associated factor
            [Medicago truncatula]
          Length = 698

 Score =  471 bits (1213), Expect = e-130
 Identities = 224/393 (56%), Positives = 293/393 (74%), Gaps = 1/393 (0%)
 Frame = -2

Query: 1225 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1049
            V I   GV Y + GAPFEF+YSYTETPK KP+++RE  ++PFGP TM RPWTG+ PLPPS
Sbjct: 64   VKISEDGVSYVIEGAPFEFKYSYTETPKSKPVQMREPPFVPFGPVTMPRPWTGRPPLPPS 123

Query: 1048 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 869
            KKK +EFDSF  PPP+KKGVK VQ PGPF PG  P+YV SREE+LGEPLT +E+ EL+ S
Sbjct: 124  KKKLKEFDSFVLPPPHKKGVKPVQSPGPFLPGTSPRYVMSREEVLGEPLTKEEINELVRS 183

Query: 868  CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 689
              +S RQL++GRDG  HNML+NIH HWKRRRVCKI+C+GV TVDMDN+C++LEEKTGGK+
Sbjct: 184  TLKSSRQLNLGRDGFIHNMLDNIHAHWKRRRVCKIKCIGVCTVDMDNVCQQLEEKTGGKV 243

Query: 688  IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEAIELRRKGR 509
            I+R GG++YLFRGRNYN+KTR  FPLMLW+P+ PVYP+LIQ+ P GLT  EA E+R+KGR
Sbjct: 244  IYRRGGVIYLFRGRNYNHKTRPRFPLMLWKPVPPVYPRLIQQVPEGLTLEEATEMRQKGR 303

Query: 508  LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 329
             + PIC LG+NGVY+NLV+++R+AFE CELVR++C  L  SD+++I  KL+D VPC LLS
Sbjct: 304  TLTPICKLGKNGVYYNLVNNVREAFEECELVRVNCQGLNKSDYRKIGAKLRDLVPCTLLS 363

Query: 328  FSDQHILLWRGKNWVSLHERIELSTEEITYQVSDNESENMTAISNSDVITTTDDILDKNI 149
            + ++HIL+WRG+NW S    +    +E T   +DN+++        DV T +   L+ N 
Sbjct: 364  YENEHILMWRGRNWKSSFPDLVEDFKEATKADADNKNDKTLQSEALDVSTPS---LNHNP 420

Query: 148  KESVRTSATLTVTENNIFPTENVTAETISTMSK 50
             E V   + L+   +  F  ++VT + +   +K
Sbjct: 421  VEHV---SNLSHDTSISFCPDDVTVDKVPCPTK 450


>ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]
            gi|75266026|sp|Q9SL79.2|CAF1P_ARATH RecName:
            Full=CRS2-associated factor 1, chloroplastic; AltName:
            Full=Chloroplastic group IIA intron splicing facilitator
            CRS2-associated factor 1; Flags: Precursor
            gi|15028051|gb|AAK76556.1| unknown protein [Arabidopsis
            thaliana] gi|20197570|gb|AAD24394.2| expressed protein
            [Arabidopsis thaliana] gi|28393847|gb|AAO42331.1| unknown
            protein [Arabidopsis thaliana]
            gi|330251862|gb|AEC06956.1| CRS2-associated factor 1
            [Arabidopsis thaliana]
          Length = 701

 Score =  471 bits (1211), Expect = e-130
 Identities = 234/405 (57%), Positives = 298/405 (73%), Gaps = 16/405 (3%)
 Frame = -2

Query: 1225 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1049
            V +   G+ Y + GAPFEF+YSYTETPKVKPLKLRE  Y PFGPTTM RPWTG+APLP S
Sbjct: 135  VKLSEDGLTYVINGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMGRPWTGRAPLPQS 194

Query: 1048 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 869
            +K  REFDSF+ PP  KKG+K VQ PGPFRPG  P+YV S+EEILGEPLT +EV+EL+ S
Sbjct: 195  QKTPREFDSFRLPPVGKKGLKPVQKPGPFRPGVGPRYVYSKEEILGEPLTKEEVRELVTS 254

Query: 868  CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 689
            C ++ RQL++GRDGLTHNML NIH  WKRRRVCKI+C GV TVDMDN+CE+LEEK GGK+
Sbjct: 255  CLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNVCEQLEEKIGGKV 314

Query: 688  IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEAIELRRKGR 509
            I+R GG+L+LFRGRNYN++TR  FPLMLW+P+ PVYP+LIQ+ P GLT  EA  +RRKGR
Sbjct: 315  IYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTRQEATNMRRKGR 374

Query: 508  LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 329
             + PIC LG+NGVY +LV ++++AFEVCELVRIDC  +K SDF++I  KLKD VPCVL+S
Sbjct: 375  ELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLVS 434

Query: 328  FSDQHILLWRGKNWVS----------LHERIELST---EEITYQVSDNESENMTAISNSD 188
            F ++ IL+WRG+ W S          + E IE+ T   E+    VS N+S+ MT     D
Sbjct: 435  FENEQILIWRGREWKSSLTTPDKKGDILEDIEVDTALPEDDEPSVSPNQSQTMTQNPPLD 494

Query: 187  VITTTDDILDKNIKESVRTSATLTVTENNI--FPTENVTAETIST 59
             +   +D    ++  S   S+ +  T N++  + T++VT  T+ +
Sbjct: 495  SMELQNDPDGHDLSPSTVDSSEMEGTINSLQSWSTKDVTEPTVDS 539


>ref|XP_006494323.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Citrus
            sinensis]
          Length = 837

 Score =  470 bits (1210), Expect = e-130
 Identities = 215/316 (68%), Positives = 263/316 (83%), Gaps = 1/316 (0%)
 Frame = -2

Query: 1225 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1049
            + I   G+ Y + GAPFEF+YSYTE PK KPLKLRE  + PFGPTTM RPWTG+APLPPS
Sbjct: 150  ISITEDGLSYVIDGAPFEFKYSYTEAPKAKPLKLREAAFSPFGPTTMGRPWTGRAPLPPS 209

Query: 1048 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 869
            KKK +EFDSF+ PPPNKKGVK VQ PGP+ PG  P+YV +REEILGEPLT++EV+EL++S
Sbjct: 210  KKKLKEFDSFQLPPPNKKGVKPVQKPGPYLPGTGPRYVSTREEILGEPLTAEEVRELVES 269

Query: 868  CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 689
             KRS RQL++GRDGLTHNML+NIH HWKRRR CKI+C GV TVDMDN+CE+LEE+TGGKI
Sbjct: 270  VKRSSRQLNMGRDGLTHNMLDNIHAHWKRRRACKIKCKGVCTVDMDNVCEQLEERTGGKI 329

Query: 688  IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEAIELRRKGR 509
            I+R GG+LYLFRGRNYNY+ R  FPLMLW+P+TPVYP+LIQ+ P GLT  EA E+R+KGR
Sbjct: 330  IYRRGGVLYLFRGRNYNYRNRPHFPLMLWKPITPVYPRLIQQVPDGLTLEEATEMRKKGR 389

Query: 508  LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 329
             + PIC LG+NGVY +L  ++R+AFEVCELVRI+C  +  SD+++I  KL+D VPCVL+S
Sbjct: 390  KLIPICKLGKNGVYCDLAKNVREAFEVCELVRINCQGMNGSDYRKIGAKLRDLVPCVLIS 449

Query: 328  FSDQHILLWRGKNWVS 281
            F  +HIL+WRG+ W S
Sbjct: 450  FEREHILMWRGQEWKS 465


>ref|XP_006451251.1| hypothetical protein CICLE_v100106541mg, partial [Citrus clementina]
            gi|557554477|gb|ESR64491.1| hypothetical protein
            CICLE_v100106541mg, partial [Citrus clementina]
          Length = 825

 Score =  470 bits (1210), Expect = e-130
 Identities = 215/316 (68%), Positives = 263/316 (83%), Gaps = 1/316 (0%)
 Frame = -2

Query: 1225 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1049
            + I   G+ Y + GAPFEF+YSYTE PK KPLKLRE  + PFGPTTM RPWTG+APLPPS
Sbjct: 156  ISITEDGLSYVIDGAPFEFKYSYTEAPKAKPLKLREAAFSPFGPTTMGRPWTGRAPLPPS 215

Query: 1048 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 869
            KKK +EFDSF+ PPPNKKGVK VQ PGP+ PG  P+YV +REEILGEPLT++EV+EL++S
Sbjct: 216  KKKLKEFDSFQLPPPNKKGVKPVQKPGPYLPGTGPRYVSTREEILGEPLTAEEVRELVES 275

Query: 868  CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 689
             KRS RQL++GRDGLTHNML+NIH HWKRRR CKI+C GV TVDMDN+CE+LEE+TGGKI
Sbjct: 276  VKRSSRQLNMGRDGLTHNMLDNIHAHWKRRRACKIKCKGVCTVDMDNVCEQLEERTGGKI 335

Query: 688  IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEAIELRRKGR 509
            I+R GG+LYLFRGRNYNY+ R  FPLMLW+P+TPVYP+LIQ+ P GLT  EA E+R+KGR
Sbjct: 336  IYRRGGVLYLFRGRNYNYRNRPHFPLMLWKPITPVYPRLIQQVPDGLTLEEATEMRKKGR 395

Query: 508  LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 329
             + PIC LG+NGVY +L  ++R+AFEVCELVRI+C  +  SD+++I  KL+D VPCVL+S
Sbjct: 396  KLIPICKLGKNGVYCDLAKNVREAFEVCELVRINCQGMNGSDYRKIGAKLRDLVPCVLIS 455

Query: 328  FSDQHILLWRGKNWVS 281
            F  +HIL+WRG+ W S
Sbjct: 456  FEREHILMWRGQEWKS 471


>ref|XP_006389456.1| hypothetical protein POPTR_0024s00430g [Populus trichocarpa]
            gi|550312256|gb|ERP48370.1| hypothetical protein
            POPTR_0024s00430g [Populus trichocarpa]
          Length = 731

 Score =  469 bits (1208), Expect = e-129
 Identities = 225/374 (60%), Positives = 285/374 (76%), Gaps = 3/374 (0%)
 Frame = -2

Query: 1225 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1049
            + +   GV Y + GAPFEF+YSYTETPKVKPLKLRE  Y PFGP TM RPWTG+APLPPS
Sbjct: 140  IKLSEDGVSYVIDGAPFEFKYSYTETPKVKPLKLREAPYAPFGPITMPRPWTGRAPLPPS 199

Query: 1048 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 869
            KKK REFDSF  PPP+KKGVK VQ PGPF PG  P+Y ++REEILG+PLT +E++EL+D 
Sbjct: 200  KKKLREFDSFVLPPPDKKGVKPVQAPGPFLPGAGPRYAKTREEILGDPLTQEEIQELVDG 259

Query: 868  CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 689
            C ++ RQL++GRDGLTHNML+NIH HWKRRRVCKI+C GV TVDMDN+C++LEE+TGGKI
Sbjct: 260  CLKAKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCQQLEERTGGKI 319

Query: 688  IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEAIELRRKGR 509
            I+R GG+LYLFRGRNYNY+ R  FPLMLW+P+TPVYP+LIQ+ P GLT  EA  +R KGR
Sbjct: 320  IYRKGGVLYLFRGRNYNYRFRPRFPLMLWKPVTPVYPRLIQRAPEGLTLQEASGMRNKGR 379

Query: 508  LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 329
             + PIC LG+NGVY +LV ++R+AFE CELVRI+C  +  SDF++I  KL+D VPCVL+S
Sbjct: 380  KLIPICKLGKNGVYRDLVRNVREAFEECELVRINCQGMNGSDFRKIGAKLRDLVPCVLIS 439

Query: 328  FSDQHILLWRGKNWVSLHERIELSTEEITYQVSDNESENMTAISNSDVITTTDDILD--K 155
            F  +HIL+WRG++W S            T  V+D +    ++I   D  T+   +L+  +
Sbjct: 440  FECEHILMWRGRDWKS----------SFTKPVNDGDEAKNSSI---DGATSATPLLEGLQ 486

Query: 154  NIKESVRTSATLTV 113
            N   SV+ ++TL +
Sbjct: 487  NETFSVKDASTLNL 500


>ref|XP_002332503.1| predicted protein [Populus trichocarpa]
          Length = 699

 Score =  469 bits (1208), Expect = e-129
 Identities = 225/374 (60%), Positives = 285/374 (76%), Gaps = 3/374 (0%)
 Frame = -2

Query: 1225 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1049
            + +   GV Y + GAPFEF+YSYTETPKVKPLKLRE  Y PFGP TM RPWTG+APLPPS
Sbjct: 140  IKLSEDGVSYVIDGAPFEFKYSYTETPKVKPLKLREAPYAPFGPITMPRPWTGRAPLPPS 199

Query: 1048 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 869
            KKK REFDSF  PPP+KKGVK VQ PGPF PG  P+Y ++REEILG+PLT +E++EL+D 
Sbjct: 200  KKKLREFDSFVLPPPDKKGVKPVQAPGPFLPGAGPRYAKTREEILGDPLTQEEIQELVDG 259

Query: 868  CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 689
            C ++ RQL++GRDGLTHNML+NIH HWKRRRVCKI+C GV TVDMDN+C++LEE+TGGKI
Sbjct: 260  CLKAKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCQQLEERTGGKI 319

Query: 688  IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEAIELRRKGR 509
            I+R GG+LYLFRGRNYNY+ R  FPLMLW+P+TPVYP+LIQ+ P GLT  EA  +R KGR
Sbjct: 320  IYRKGGVLYLFRGRNYNYRFRPRFPLMLWKPVTPVYPRLIQRAPEGLTLQEASGMRNKGR 379

Query: 508  LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 329
             + PIC LG+NGVY +LV ++R+AFE CELVRI+C  +  SDF++I  KL+D VPCVL+S
Sbjct: 380  KLIPICKLGKNGVYRDLVRNVREAFEECELVRINCQGMNGSDFRKIGAKLRDLVPCVLIS 439

Query: 328  FSDQHILLWRGKNWVSLHERIELSTEEITYQVSDNESENMTAISNSDVITTTDDILD--K 155
            F  +HIL+WRG++W S            T  V+D +    ++I   D  T+   +L+  +
Sbjct: 440  FECEHILMWRGRDWKS----------SFTKPVNDGDEAKNSSI---DGATSATPLLEGLQ 486

Query: 154  NIKESVRTSATLTV 113
            N   SV+ ++TL +
Sbjct: 487  NETFSVKDASTLNL 500


>ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
            sativus] gi|449521361|ref|XP_004167698.1| PREDICTED:
            CRS2-associated factor 1, chloroplastic-like [Cucumis
            sativus]
          Length = 745

 Score =  466 bits (1199), Expect = e-128
 Identities = 234/393 (59%), Positives = 283/393 (72%), Gaps = 18/393 (4%)
 Frame = -2

Query: 1225 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLRENYLPFGPTTMERPWTGKAPLPPSK 1046
            V +   GV Y + GAPFEF+YSYTETPKVKP+KLRE Y PFGPTTM RPWTG+APLPPSK
Sbjct: 145  VSLSEDGVSYVIDGAPFEFKYSYTETPKVKPIKLREPYAPFGPTTMSRPWTGRAPLPPSK 204

Query: 1045 KKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDSC 866
            KK  EFDSF+ PP NKKGVK VQ PGPF  G  PKYV SREEILGEPLT +E+K L+  C
Sbjct: 205  KKLPEFDSFQLPPKNKKGVKPVQAPGPFLAGSGPKYVMSREEILGEPLTKEEIKALIRGC 264

Query: 865  KRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKII 686
              S+RQL+IGRDGLTHNMLENIH  WKRRRVCKI+C GV TVDMDN+ ++LEE+TGGKII
Sbjct: 265  INSNRQLNIGRDGLTHNMLENIHALWKRRRVCKIKCKGVCTVDMDNVKQQLEERTGGKII 324

Query: 685  HRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEAIELRRKGRL 506
            +  GG LYL+RGRNYNYKTR  FPLMLW+P  PVYP+L++  P GLT  E  E+R+KGR 
Sbjct: 325  YSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLVKHIPDGLTLEEVTEMRKKGRK 384

Query: 505  VPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLSF 326
            + PIC LG+NGVY  LV  +R+AFE CELVRI+C  L  SDF++I  KLKD VPCVL+SF
Sbjct: 385  LIPICKLGKNGVYSALVKHVREAFEECELVRINCQGLNGSDFRKIGAKLKDLVPCVLISF 444

Query: 325  SDQHILLWRGKNWVSLHERIELS--------TEEITYQVSDNESE-----NMTAISNSDV 185
              +HILLWRG++W S    IE +        T+E T      E +      +T++ + D+
Sbjct: 445  ESEHILLWRGRDWKSSLPYIERNPEGAKAHGTDETTIVAPSIEQDVSVKNTLTSLDSEDL 504

Query: 184  ITTTDD-----ILDKNIKESVRTSATLTVTENN 101
             T  ++     I +K+I   V  S T T+ E+N
Sbjct: 505  STGGNEDPDSMIAEKSISADV-DSLTTTMHESN 536


>ref|XP_003532480.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Glycine max]
          Length = 723

 Score =  463 bits (1192), Expect = e-128
 Identities = 224/391 (57%), Positives = 285/391 (72%), Gaps = 10/391 (2%)
 Frame = -2

Query: 1225 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1049
            V I   G+ Y + GAPFEF+YSYTETPKVKP+K+RE  ++PFGP TM RPWTG+APLP S
Sbjct: 93   VKISDDGLSYVIDGAPFEFKYSYTETPKVKPIKMREAPFVPFGPDTMPRPWTGRAPLPAS 152

Query: 1048 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 869
            KKK +EFDSF  PPP+KKGVK VQ PGP+  G  P+YV+SREEILGEPLT +E+++L+ S
Sbjct: 153  KKKLKEFDSFVLPPPHKKGVKPVQSPGPYLAGTGPRYVKSREEILGEPLTQEEIRDLVKS 212

Query: 868  CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 689
            C ++ RQL+IGRDGLTHNML+NIH HWKRRR CKIRC GV TVDMDN+C +LEE+TGGKI
Sbjct: 213  CMKAQRQLNIGRDGLTHNMLDNIHAHWKRRRACKIRCKGVCTVDMDNVCHQLEERTGGKI 272

Query: 688  IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEAIELRRKGR 509
            IHR GG+LYLFRGRNYNYKTR  FPLMLW+P+ PVYP+L+Q+ P GLT  EA ++R+KG 
Sbjct: 273  IHRKGGVLYLFRGRNYNYKTRPHFPLMLWKPVPPVYPRLVQRVPEGLTLEEATKMRQKGS 332

Query: 508  LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 329
             + PIC LG+NGVY +LV  +R+AFE CELVRI+C  L  SD+++I  KL+D VPC LLS
Sbjct: 333  TLIPICKLGKNGVYCDLVKTVREAFEECELVRINCQGLNKSDYRKIGAKLRDLVPCTLLS 392

Query: 328  FSDQHILLWRGKNWVS--------LHERIELSTEEITYQVSDNESENMTAIS-NSDVITT 176
            F  +HIL+WRG NW S          E  ++  +   Y+   +E+   +A S   + +  
Sbjct: 393  FEYEHILMWRGPNWKSSIPDRGDDRKESKQIEVDHKNYKPLPSEALEFSAPSLQMNPLEH 452

Query: 175  TDDILDKNIKESVRTSATLTVTENNIFPTEN 83
              ++L      S+ +  TL   E + +P EN
Sbjct: 453  ESNLLHDTSISSISSDVTLDKVEVS-YPNEN 482


>ref|XP_002886005.1| hypothetical protein ARALYDRAFT_480467 [Arabidopsis lyrata subsp.
            lyrata] gi|297331845|gb|EFH62264.1| hypothetical protein
            ARALYDRAFT_480467 [Arabidopsis lyrata subsp. lyrata]
          Length = 700

 Score =  463 bits (1192), Expect = e-128
 Identities = 227/412 (55%), Positives = 298/412 (72%), Gaps = 4/412 (0%)
 Frame = -2

Query: 1225 VVIGPHGVGYKVPGAPFEFQYSYTETPKVKPLKLREN-YLPFGPTTMERPWTGKAPLPPS 1049
            V +   G+ Y + GAPFEF+YSYTETPKVKPLKLRE  Y PFGPTTM RPWTG+APLP S
Sbjct: 135  VKLSEDGLSYVINGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMGRPWTGRAPLPQS 194

Query: 1048 KKKRREFDSFKPPPPNKKGVKSVQPPGPFRPGDKPKYVRSREEILGEPLTSDEVKELLDS 869
            +K  REFDSF+ PP  KKGVK VQ PGPFRPG  P+YV ++EEILGEPLT +E++EL+ S
Sbjct: 195  QKTPREFDSFRLPPDGKKGVKPVQKPGPFRPGLGPRYVYTKEEILGEPLTKEEIRELVTS 254

Query: 868  CKRSHRQLHIGRDGLTHNMLENIHHHWKRRRVCKIRCLGVATVDMDNICEKLEEKTGGKI 689
            C ++ RQL++GRDGLTHNML NIH  WKRRRVCKI+C GV TVDMD +CE+LEEK GGK+
Sbjct: 255  CLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDKVCEQLEEKIGGKV 314

Query: 688  IHRHGGILYLFRGRNYNYKTRQVFPLMLWRPMTPVYPKLIQKTPAGLTENEAIELRRKGR 509
            I+R GG+L+LFRGRNYN++TR  FPLMLW+P+ PVYP+LIQ+ P GLT  EA E+RRKGR
Sbjct: 315  IYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTLQEATEMRRKGR 374

Query: 508  LVPPICALGRNGVYHNLVSDIRDAFEVCELVRIDCTKLKPSDFKRIAGKLKDTVPCVLLS 329
             + PIC LG+NGVY +LV ++++AFEVCELVRIDC  +K SDF++I  KLKD VPCVL+S
Sbjct: 375  ELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLIS 434

Query: 328  FSDQHILLWRGKNW---VSLHERIELSTEEITYQVSDNESENMTAISNSDVITTTDDILD 158
            F ++ IL+WRG+ W   +++ ++ +   E+I    +  E +  +   N     T +  LD
Sbjct: 435  FENEQILIWRGREWKSSLTIPDKKDDILEDIEVDAALPEDDEASVSPNQTQTVTQNPPLD 494

Query: 157  KNIKESVRTSATLTVTENNIFPTENVTAETISTMSKQHAALRNFDSSVQDEK 2
                ++      L+ +  +    E+ T+ ++ + S +       DSS+QD +
Sbjct: 495  SMELQNDPGGHDLSPSTVDFSAMED-TSNSLQSPSTKDLTEPTADSSIQDHE 545