BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00015641
         (460 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002520003.1| hypothetical protein EpeqC_p069 (chloroplast...   310   1e-82
ref|YP_008082239.1| hypothetical protein (chloroplast) [Gnetum m...   137   2e-30
ref|YP_002519738.1| hypothetical protein GnpaC_p010 [Gnetum parv...   137   2e-30
dbj|BAH11181.1| hypothetical protein (chloroplast) [Welwitschia ...   136   3e-30
ref|YP_001876624.1| hypothetical chloroplast RF1 [Welwitschia mi...   136   3e-30
ref|NP_039357.1| hypothetical protein MapoCp088 [Marchantia poly...    62   1e-07
ref|YP_008577551.1| hypothetical chloroplast RF1 (chloroplast) [...    56   4e-06

>ref|YP_002520003.1| hypothetical protein EpeqC_p069 (chloroplast) [Ephedra equisetina]
           gi|220983604|dbj|BAH11371.1| hypothetical protein
           (chloroplast) [Ephedra equisetina]
          Length = 2018

 Score =  310 bits (794), Expect = 1e-82
 Identities = 148/152 (97%), Positives = 148/152 (97%)
 Frame = +3

Query: 3   RNTYIKPGVSFLPFLKDRVSQYFFGHCYSDGKEKLCFTLLPTKFTLAKNLEDLKKIYSHN 182
           RNTYIKPGVSFLPFLKDRVSQYFFGHCYSDGKEKLCFTLLPTKF LAKNLED KK YSHN
Sbjct: 274 RNTYIKPGVSFLPFLKDRVSQYFFGHCYSDGKEKLCFTLLPTKFILAKNLEDFKKTYSHN 333

Query: 183 DKIWTNNLKNRKNVLWKEFRNRVNRINKAETLAREENQKRYTVTVKPIGVYDWALTFQPT 362
           DKIWTNNLKNRKNVLWKEFRNRVNRINKAETLAREENQKRYTVTVKPI VYDWALTFQPT
Sbjct: 334 DKIWTNNLKNRKNVLWKEFRNRVNRINKAETLAREENQKRYTVTVKPIRVYDWALTFQPT 393

Query: 363 MIKFVLQRVYQLIKEKTILWPKKRKMWIQERA 458
           MIKFVLQRVYQLIKEKTILWPKKRKMWIQERA
Sbjct: 394 MIKFVLQRVYQLIKEKTILWPKKRKMWIQERA 425


>ref|YP_008082239.1| hypothetical protein (chloroplast) [Gnetum montanum]
           gi|490345065|gb|AGL11085.1| hypothetical protein
           (chloroplast) [Gnetum montanum]
          Length = 2349

 Score =  137 bits (344), Expect = 2e-30
 Identities = 61/145 (42%), Positives = 96/145 (66%)
 Frame = +3

Query: 3   RNTYIKPGVSFLPFLKDRVSQYFFGHCYSDGKEKLCFTLLPTKFTLAKNLEDLKKIYSHN 182
           R  YI+    F PFLK RVSQYFFG C+SDGK++LCFT  PT+F L + LE +    +  
Sbjct: 338 RKAYIRLYEDFQPFLKARVSQYFFGQCFSDGKKRLCFTKFPTQFFLEQKLEKIHN--TDY 395

Query: 183 DKIWTNNLKNRKNVLWKEFRNRVNRINKAETLAREENQKRYTVTVKPIGVYDWALTFQPT 362
           +  W +NL+N+K   W+E ++R+ +++ A+ + R E++K+Y V + PI +Y W + F+ T
Sbjct: 396 EDFWLDNLRNKKFYFWQELQDRIAKMSNADLIVRREDKKKYRVELAPIPIYAWMINFEET 455

Query: 363 MIKFVLQRVYQLIKEKTILWPKKRK 437
           + K+++Q  Y+  +EKTI W  K+K
Sbjct: 456 LQKYLMQCAYRFFREKTIPWILKKK 480


>ref|YP_002519738.1| hypothetical protein GnpaC_p010 [Gnetum parvifolium]
           gi|220983480|dbj|BAH11248.1| hypothetical protein
           (chloroplast) [Gnetum parvifolium]
          Length = 1540

 Score =  137 bits (344), Expect = 2e-30
 Identities = 61/145 (42%), Positives = 96/145 (66%)
 Frame = +3

Query: 3   RNTYIKPGVSFLPFLKDRVSQYFFGHCYSDGKEKLCFTLLPTKFTLAKNLEDLKKIYSHN 182
           R  YI+    F PFLK RVSQYFFG C+SDGK++LCFT  PT+F L + LE +    +  
Sbjct: 338 RKAYIRLYEDFQPFLKARVSQYFFGQCFSDGKKRLCFTKFPTQFFLEQKLEKIHN--TDY 395

Query: 183 DKIWTNNLKNRKNVLWKEFRNRVNRINKAETLAREENQKRYTVTVKPIGVYDWALTFQPT 362
           +  W +NL+N+K   W+E ++R+ +++ A+ + R E++K+Y V + PI +Y W + F+ T
Sbjct: 396 EDFWLDNLRNKKFYFWQELQDRIAKMSNADLIVRREDKKKYRVELAPIPIYAWMINFEET 455

Query: 363 MIKFVLQRVYQLIKEKTILWPKKRK 437
           + K+++Q  Y+  +EKTI W  K+K
Sbjct: 456 LQKYLMQCAYRFFREKTIPWILKKK 480


>dbj|BAH11181.1| hypothetical protein (chloroplast) [Welwitschia mirabilis]
          Length = 2575

 Score =  136 bits (343), Expect = 3e-30
 Identities = 66/158 (41%), Positives = 101/158 (63%), Gaps = 6/158 (3%)
 Frame = +3

Query: 3   RNTYIKPGVSFLPFLKDRVSQYFFGHCYSDGKEKLCFTLLPTKFTLAKNLEDLKKIYSHN 182
           R  + +P   ++PF+KDRVSQYFF  CYSDG E+L FT+ PTK  L +  +   K +S N
Sbjct: 357 RRVFKRPHSDWIPFIKDRVSQYFFSPCYSDGNERLSFTMSPTKMFLEQKFQ---KTFSDN 413

Query: 183 D----KIWTNNLKNRKNVLWKEFRNRVNRINKAETLAREENQKRYTVTVKPIGVYDWALT 350
           +    K W N+ + R    WKEFR+R+N IN AE +AR E    + V + PI + +W + 
Sbjct: 414 ESSYKKFWINDFRTRNFSFWKEFRDRINLINNAEFIARYEESLGHKVKLTPIEIQEWVMA 473

Query: 351 FQPTMIKFVLQRVYQLIKEKTILW--PKKRKMWIQERA 458
           F+ T+ K+++Q+ Y++ +EKTI W   K+R ++I++RA
Sbjct: 474 FERTVEKYMMQQAYKIFREKTIPWMLRKRRNLFIKKRA 511


>ref|YP_001876624.1| hypothetical chloroplast RF1 [Welwitschia mirabilis]
           gi|163311679|gb|ABY26837.1| hypothetical chloroplast RF1
           [Welwitschia mirabilis]
          Length = 2659

 Score =  136 bits (343), Expect = 3e-30
 Identities = 66/158 (41%), Positives = 101/158 (63%), Gaps = 6/158 (3%)
 Frame = +3

Query: 3   RNTYIKPGVSFLPFLKDRVSQYFFGHCYSDGKEKLCFTLLPTKFTLAKNLEDLKKIYSHN 182
           R  + +P   ++PF+KDRVSQYFF  CYSDG E+L FT+ PTK  L +  +   K +S N
Sbjct: 404 RRVFKRPHSDWIPFIKDRVSQYFFSPCYSDGNERLSFTMSPTKMFLEQKFQ---KTFSDN 460

Query: 183 D----KIWTNNLKNRKNVLWKEFRNRVNRINKAETLAREENQKRYTVTVKPIGVYDWALT 350
           +    K W N+ + R    WKEFR+R+N IN AE +AR E    + V + PI + +W + 
Sbjct: 461 ESSYKKFWINDFRTRNFSFWKEFRDRINLINNAEFIARYEESLGHKVKLTPIEIQEWVMA 520

Query: 351 FQPTMIKFVLQRVYQLIKEKTILW--PKKRKMWIQERA 458
           F+ T+ K+++Q+ Y++ +EKTI W   K+R ++I++RA
Sbjct: 521 FERTVEKYMMQQAYKIFREKTIPWMLRKRRNLFIKKRA 558


>ref|NP_039357.1| hypothetical protein MapoCp088 [Marchantia polymorpha]
           gi|140539|sp|P12221.1|YCF1A_MARPO RecName: Full=Putative
           membrane protein ycf1 N-terminal part; AltName: Full=ORF
           1068 gi|11732|emb|CAA28143.1| unnamed protein product
           [Marchantia polymorpha]
          Length = 1068

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 19/156 (12%)
 Frame = +3

Query: 45  LKDRVSQYFFGHCYSDGKEKLCFTLLPTKFTLAKNLEDLK---KIYSHND--KIWTNNLK 209
           +K +VSQYFF    SDGK +L FT LP+ +   KNL+       ++S N+  + W  N K
Sbjct: 286 IKKKVSQYFFNISLSDGKPRLSFTYLPSLYYFEKNLQKSSINFNLFSSNEIYEKWIKNKK 345

Query: 210 NRKNVLWKEFRNRVNRINKAETLAREENQKR---------YTVTVKPIGVYDWALTFQPT 362
           N+K  ++KEF+NR   ++    LA    +K          +T    P+ +  +      +
Sbjct: 346 NKKLKIYKEFKNRFKFLDNGFFLAEIIEKKNILSTFEGNIFTKICDPLLIKQYDKKMIVS 405

Query: 363 MIKFVL-QRVYQLIK-EKTILWPK---KRKMWIQER 455
              ++L ++ Y+L K +KT+ + K   K K WI  +
Sbjct: 406 KSPWLLTEKSYKLTKTQKTLTFSKKDNKLKKWISNQ 441


>ref|YP_008577551.1| hypothetical chloroplast RF1 (chloroplast) [Eucalyptus
           erythrocorys] gi|442568791|gb|AGC58960.1| hypothetical
           chloroplast RF1 (chloroplast) [Eucalyptus erythrocorys]
          Length = 1877

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 17/104 (16%)
 Frame = +3

Query: 45  LKDRVSQYFFGHCYSDGKEKLCFTLLPTKFTLAKNLED----LKKIYSHNDKI---WTNN 203
           +++ VSQYFF  C ++GKEK+ FT  P+  T  + +E     L K   H++K+   W   
Sbjct: 392 VRNEVSQYFFYICRNNGKEKISFTYPPSLSTFLEMIERKISLLTKEKLHSEKLYDHWIYT 451

Query: 204 LKNRKNVLWKEFRNRVNRINKAE----------TLAREENQKRY 305
              +KN L K+FRNR+  +NK             L  +EN+K Y
Sbjct: 452 NDQKKNNLSKKFRNRMETLNKGSITLDVFEKRTRLCNDENKKEY 495