BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00015631
         (501 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002962932.1| hypothetical protein SELMODRAFT_438209 [Sela...    64   2e-08
ref|XP_002962346.1| hypothetical protein SELMODRAFT_79007 [Selag...    64   2e-08
ref|XP_006584249.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-...    63   4e-08
ref|XP_002532325.1| ubiquitin ligase E3 alpha, putative [Ricinus...    63   5e-08

>ref|XP_002962932.1| hypothetical protein SELMODRAFT_438209 [Selaginella moellendorffii]
            gi|300169793|gb|EFJ36395.1| hypothetical protein
            SELMODRAFT_438209 [Selaginella moellendorffii]
          Length = 2059

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 1/167 (0%)
 Frame = -3

Query: 499  DGVLFAALHLLALGVDICSSMKFGIHGKQVXXXXXXXXXXXXXXXXXXSYATETAYAENI 320
            + +LF ALHLL+LG+D+C++  F                         + A E  +    
Sbjct: 1005 ESLLFTALHLLSLGLDVCNT--FANKSSAEASSVSGPSISSVDRPPLLALAPEFVHVGGA 1062

Query: 319  CRPEMIDNKNXXXXXXXLMKKHNKNID-QVASNEHNKYSVSYLIRKLLEKFAGLDSSCRR 143
               ++ D ++       LM+K+  +   Q+  +E ++ +V   I+KLL  FA LD  C  
Sbjct: 1063 DGTQLFDRQSTLSLLVILMRKYIASEGAQLIISETSQSNVGCFIKKLLHNFAELDRQCMY 1122

Query: 142  EIQKLAPEVLQHLTMHKAECSNSRSKEISETSTSLSDAERKKALARE 2
             I+ LAPE+L  ++   +  +   S++  E    LSD E+K+A ARE
Sbjct: 1123 AIESLAPEILHRVSTDSSSKAEGTSQD--ELQAELSDIEKKRAHARE 1167


>ref|XP_002962346.1| hypothetical protein SELMODRAFT_79007 [Selaginella moellendorffii]
            gi|300169207|gb|EFJ35809.1| hypothetical protein
            SELMODRAFT_79007 [Selaginella moellendorffii]
          Length = 2008

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 1/167 (0%)
 Frame = -3

Query: 499  DGVLFAALHLLALGVDICSSMKFGIHGKQVXXXXXXXXXXXXXXXXXXSYATETAYAENI 320
            + +LF ALHLL+LG+D+C++  F                         + A E  +    
Sbjct: 968  ESLLFTALHLLSLGLDVCNT--FANKSSAEASSVSGPSISSVDHPPLLALAPEFVHVGGA 1025

Query: 319  CRPEMIDNKNXXXXXXXLMKKHNKNID-QVASNEHNKYSVSYLIRKLLEKFAGLDSSCRR 143
               ++ D ++       LM+K+  +   Q+  +E ++ +V   I+KLL  FA LD  C  
Sbjct: 1026 DGTQLFDRQSTLSLLVILMRKYIASEGAQLIISETSQSNVGCFIKKLLHNFAELDRQCMY 1085

Query: 142  EIQKLAPEVLQHLTMHKAECSNSRSKEISETSTSLSDAERKKALARE 2
             I+ LAPE+L  ++   +  +   S++  E    LSD E+K+A ARE
Sbjct: 1086 AIESLAPEILHRVSTDSSSKAEGTSQD--ELQAELSDIEKKRAHARE 1130


>ref|XP_006584249.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Glycine max]
          Length = 2046

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 54/167 (32%), Positives = 77/167 (46%), Gaps = 1/167 (0%)
 Frame = -3

Query: 499  DGVLFAALHLLALGVDICSSMKFGIHGKQVXXXXXXXXXXXXXXXXXXSYATETAYAENI 320
            D VL  ALHLL+L +DIC   K                              E+++ E  
Sbjct: 990  DSVLLPALHLLSLSLDICFQQKESSENT-------CHDVSHLPIIALSGEIIESSFGEQS 1042

Query: 319  CRPEMIDNKNXXXXXXXLMKKHNK-NIDQVASNEHNKYSVSYLIRKLLEKFAGLDSSCRR 143
                ++           LM+ H K N+D     E    S+  LI  LL+KFA +D+ C  
Sbjct: 1043 LLSLLV----------LLMEMHRKENVDNFV--EAGGCSLYSLIESLLKKFAEIDNRCMT 1090

Query: 142  EIQKLAPEVLQHLTMHKAECSNSRSKEISETSTSLSDAERKKALARE 2
            ++QKLAPEV+ H+    +EC  +R    S  S+S SD+E++KA ARE
Sbjct: 1091 KLQKLAPEVVSHI----SECVPTRD---SSVSSSASDSEKRKAKARE 1130


>ref|XP_002532325.1| ubiquitin ligase E3 alpha, putative [Ricinus communis]
            gi|223527968|gb|EEF30052.1| ubiquitin ligase E3 alpha,
            putative [Ricinus communis]
          Length = 2073

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 54/167 (32%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
 Frame = -3

Query: 499  DGVLFAALHLLALGVDICSSMKFGIHGKQVXXXXXXXXXXXXXXXXXXSYATETAYAENI 320
            DG+L  ALHLL+LG+DIC   +                          ++A E  + E I
Sbjct: 1009 DGILIMALHLLSLGLDICLQQR----------EPGDLSLFCGDSIPMLAFAVEEIH-EGI 1057

Query: 319  CRPEMIDNKNXXXXXXXLMKKHNK-NIDQVASNEHNKYSVSYLIRKLLEKFAGLDSSCRR 143
                    ++       LM+ H + N+D  +  E +  ++S LI  LL+KFA LDS CR 
Sbjct: 1058 SYGA--GEQSLLSLLVSLMRMHKRDNLDNFS--ESDGCNISSLIESLLKKFAELDSGCRT 1113

Query: 142  EIQKLAPEVLQHLTMHKAECSNSRSKEISETSTSLSDAERKKALARE 2
            ++Q+LAPEV+ HL       S       + +  S SD+E++KA ARE
Sbjct: 1114 KLQQLAPEVVIHL-------SQPSPHSDAHSVGSASDSEKRKAKARE 1153