BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00015630
         (464 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006584249.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-...    59   5e-07
ref|XP_002962932.1| hypothetical protein SELMODRAFT_438209 [Sela...    57   2e-06
ref|XP_002962346.1| hypothetical protein SELMODRAFT_79007 [Selag...    57   2e-06

>ref|XP_006584249.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Glycine max]
          Length = 2046

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
 Frame = +2

Query: 200  MKKHDK-NIDQVASNEYNKYSVSYLIRKLLEKFAGLDSSCRREIQKLAPEVLQHLTMHKA 376
            M+ H K N+D     E    S+  LI  LL+KFA +D+ C  ++QKLAPEV+ H+    +
Sbjct: 1051 MEMHRKENVDNFV--EAGGCSLYSLIESLLKKFAEIDNRCMTKLQKLAPEVVSHI----S 1104

Query: 377  ECSNSRSKEISEISTSLSDAERKKALARE 463
            EC  +R    S +S+S SD+E++KA ARE
Sbjct: 1105 ECVPTRD---SSVSSSASDSEKRKAKARE 1130


>ref|XP_002962932.1| hypothetical protein SELMODRAFT_438209 [Selaginella moellendorffii]
            gi|300169793|gb|EFJ36395.1| hypothetical protein
            SELMODRAFT_438209 [Selaginella moellendorffii]
          Length = 2059

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
 Frame = +2

Query: 2    LGIDICSSMKFGTHGKQVASGXXXXXXXXXXXXXXXXYATETAYAENICRSEMIDNKNXX 181
            LG+D+C++  F       AS                  A E  +      +++ D ++  
Sbjct: 1017 LGLDVCNT--FANKSSAEASSVSGPSISSVDRPPLLALAPEFVHVGGADGTQLFDRQSTL 1074

Query: 182  XXXXXXMKKHDKNID-QVASNEYNKYSVSYLIRKLLEKFAGLDSSCRREIQKLAPEVLQH 358
                  M+K+  +   Q+  +E ++ +V   I+KLL  FA LD  C   I+ LAPE+L  
Sbjct: 1075 SLLVILMRKYIASEGAQLIISETSQSNVGCFIKKLLHNFAELDRQCMYAIESLAPEILHR 1134

Query: 359  LTMHKAECSNSRSKEISEISTSLSDAERKKALARE 463
            ++   +  +   S++  E+   LSD E+K+A ARE
Sbjct: 1135 VSTDSSSKAEGTSQD--ELQAELSDIEKKRAHARE 1167


>ref|XP_002962346.1| hypothetical protein SELMODRAFT_79007 [Selaginella moellendorffii]
            gi|300169207|gb|EFJ35809.1| hypothetical protein
            SELMODRAFT_79007 [Selaginella moellendorffii]
          Length = 2008

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
 Frame = +2

Query: 2    LGIDICSSMKFGTHGKQVASGXXXXXXXXXXXXXXXXYATETAYAENICRSEMIDNKNXX 181
            LG+D+C++  F       AS                  A E  +      +++ D ++  
Sbjct: 980  LGLDVCNT--FANKSSAEASSVSGPSISSVDHPPLLALAPEFVHVGGADGTQLFDRQSTL 1037

Query: 182  XXXXXXMKKHDKNID-QVASNEYNKYSVSYLIRKLLEKFAGLDSSCRREIQKLAPEVLQH 358
                  M+K+  +   Q+  +E ++ +V   I+KLL  FA LD  C   I+ LAPE+L  
Sbjct: 1038 SLLVILMRKYIASEGAQLIISETSQSNVGCFIKKLLHNFAELDRQCMYAIESLAPEILHR 1097

Query: 359  LTMHKAECSNSRSKEISEISTSLSDAERKKALARE 463
            ++   +  +   S++  E+   LSD E+K+A ARE
Sbjct: 1098 VSTDSSSKAEGTSQD--ELQAELSDIEKKRAHARE 1130