BLASTX nr result
ID: Ephedra27_contig00015616
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00015616
(3702 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001755844.1| predicted protein [Physcomitrella patens] gi... 1755 0.0
ref|XP_002977127.1| hypothetical protein SELMODRAFT_443461 [Sela... 1730 0.0
ref|XP_002992124.1| hypothetical protein SELMODRAFT_430375 [Sela... 1721 0.0
ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s... 1643 0.0
ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr... 1642 0.0
ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s... 1642 0.0
gb|EOY19609.1| DNA-directed RNA polymerase isoform 1 [Theobroma ... 1623 0.0
ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III s... 1617 0.0
ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III s... 1616 0.0
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s... 1612 0.0
gb|EOY19611.1| DNA-directed RNA polymerase isoform 3 [Theobroma ... 1608 0.0
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put... 1596 0.0
ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III s... 1593 0.0
gb|ESW24958.1| hypothetical protein PHAVU_004G175000g [Phaseolus... 1593 0.0
ref|NP_001050323.1| Os03g0403100 [Oryza sativa Japonica Group] g... 1575 0.0
gb|AAP03366.1| putative RNA polymerase III [Oryza sativa Japonic... 1575 0.0
ref|XP_006656544.1| PREDICTED: DNA-directed RNA polymerase III s... 1572 0.0
ref|XP_004510587.1| PREDICTED: DNA-directed RNA polymerase III s... 1571 0.0
ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III s... 1568 0.0
ref|XP_004951189.1| PREDICTED: DNA-directed RNA polymerase III s... 1568 0.0
>ref|XP_001755844.1| predicted protein [Physcomitrella patens] gi|162693163|gb|EDQ79517.1|
predicted protein [Physcomitrella patens]
Length = 1135
Score = 1755 bits (4546), Expect = 0.0
Identities = 885/1145 (77%), Positives = 981/1145 (85%), Gaps = 9/1145 (0%)
Frame = -2
Query: 3521 YENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVIS 3342
+ ++ L APVKTAVDKFQLLP+FLKVRGLVKQHIDSFN+F+N EIKKIIHA+ NEKV S
Sbjct: 9 HSHKEGLEAPVKTAVDKFQLLPSFLKVRGLVKQHIDSFNYFINCEIKKIIHAQGNEKVTS 68
Query: 3341 ENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVR 3162
+ + NFYLKYLDI V PC+E+D ++ TP QCRLRDMTY+API VDVEYTRG E+V
Sbjct: 69 DVDANFYLKYLDIFVGEPCVEQDYIYEPITPQQCRLRDMTYSAPISVDVEYTRGKEVV-- 126
Query: 3161 KGKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLS 2982
G+I IGR+PIMLRS +CIL GK+E +LAK+GECPLDPGGYFVVKGTEKVILIQEQLS
Sbjct: 127 ---GSINIGRMPIMLRSSRCILAGKNEAQLAKVGECPLDPGGYFVVKGTEKVILIQEQLS 183
Query: 2981 KNRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGI 2802
KNRI+I TDS G THE+KSKT ++VKHE YL+ NTF +D+PIV+V++AMG+
Sbjct: 184 KNRIIITTDSSGSVAASVTSSTHERKSKTNMVVKHERIYLRHNTFGDDIPIVVVMRAMGM 243
Query: 2801 ESDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSK 2622
ESDQE VQMVGRDP++ GIL PSLQ CA+ IYT ALEYLG+KV+
Sbjct: 244 ESDQEIVQMVGRDPKYAGILNPSLQECAALKIYTSHQALEYLGSKVR------------- 290
Query: 2621 VDEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLEL 2442
VDEARDIL V LA+VPVH+FDFR KCIY+AV++R+M+EAMLN EAVDD DYVGNKRLEL
Sbjct: 291 VDEARDILATVVLAHVPVHQFDFRAKCIYLAVIIRKMLEAMLNREAVDDMDYVGNKRLEL 350
Query: 2441 AGVLIALLFEDLFKRMNQEIKSHVDKTFSK-QRSTMFDVAKAIPPHIISYGLEHAISSGN 2265
AG L++LLFEDLFKRMN E+K +D T SK RST FD+ K I P ++ GLEHAISSGN
Sbjct: 351 AGQLLSLLFEDLFKRMNAELKKSMDATLSKANRSTQFDIIKLIRPDTLTNGLEHAISSGN 410
Query: 2264 WNVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPCD 2085
W VKRFKMDRKGVTQVVSRLS+IA+LGHMTRI SQFEKTRKVSGPRALQ SQWGMLCPCD
Sbjct: 411 WAVKRFKMDRKGVTQVVSRLSFIAALGHMTRISSQFEKTRKVSGPRALQPSQWGMLCPCD 470
Query: 2084 TPEGEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFNG 1905
TPEGEACGLVKNL+LMTHVTTDEEEAPLI LC TLGVEDLSLLSGEELHS K YL+ FNG
Sbjct: 471 TPEGEACGLVKNLSLMTHVTTDEEEAPLIELCTTLGVEDLSLLSGEELHSPKTYLVFFNG 530
Query: 1904 LMLGIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDK-QRCVYVASDGGRVCRPLVIADNG 1728
+LG+HR+P RFA LR LRRAGKIGEFVSV VN K QR + +ASDGGRVCRPLVIAD G
Sbjct: 531 TILGVHRRPNRFAEVLRKLRRAGKIGEFVSVHVNPKHQRNIQIASDGGRVCRPLVIADKG 590
Query: 1727 ISRIKEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSHIEIEPF 1548
+SR+KEHHMKEL+DGFRTFDDFLREGLVEYLDVNEENN+LIALYE +AT T+HIEIEPF
Sbjct: 591 VSRVKEHHMKELKDGFRTFDDFLREGLVEYLDVNEENNSLIALYEGDATPDTTHIEIEPF 650
Query: 1547 TILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTT 1368
TILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTLLYLLVYPQRPLL+T
Sbjct: 651 TILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLQRMDTLLYLLVYPQRPLLST 710
Query: 1367 KTIELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKH 1188
K+IELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV+KK +KK+
Sbjct: 711 KSIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVIKKSVVPMKKY 770
Query: 1187 PNRTQDRIIGPTSSSG-----RVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREE 1023
NRT DRI+ P S +V R Q D+DGIAA GE+IR DIY+NKQ+P TR
Sbjct: 771 ANRTADRIMAPELQSSAKGGVQVVARQQLQDHDGIAAVGEMIRPGDIYVNKQSPIDTRNN 830
Query: 1022 VKNPMALPDSEYKFTPQTYK--APEPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKF 849
V NPMALPDS YK TPQTYK A E +VVDKV+LTSN+E+ +K L RQTRRPE+GDKF
Sbjct: 831 VNNPMALPDSAYKRTPQTYKGAAGETAVVDKVLLTSNDENHFVVKCLIRQTRRPEVGDKF 890
Query: 848 SSRHGQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGK 669
SSRHGQKGVCG IVQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAG+ GK
Sbjct: 891 SSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGLHNGK 950
Query: 668 FHYGSAFGEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKL 489
FHYGSAFGEPSGHADKV TI ATLVKHGF YSGKD IYSGITG PLQAYIFMGPIYYQKL
Sbjct: 951 FHYGSAFGEPSGHADKVSTISATLVKHGFSYSGKDFIYSGITGSPLQAYIFMGPIYYQKL 1010
Query: 488 KHMVVDKMHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISS 309
KHMV+DKMHARA GPR++LTRQPTEGRSR+GGLRLGEMERDCLIAYGASMMILERLMISS
Sbjct: 1011 KHMVLDKMHARARGPRVVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMMILERLMISS 1070
Query: 308 DQFEIQVCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRL 129
DQF+IQVCTKCG++GYY+HKLK+ CSTCKSG+ IATMKLPYACKLLFQELQSMNIVPRL
Sbjct: 1071 DQFQIQVCTKCGMIGYYHHKLKICLCSTCKSGDNIATMKLPYACKLLFQELQSMNIVPRL 1130
Query: 128 QLAEA 114
LAEA
Sbjct: 1131 TLAEA 1135
>ref|XP_002977127.1| hypothetical protein SELMODRAFT_443461 [Selaginella moellendorffii]
gi|300155103|gb|EFJ21736.1| hypothetical protein
SELMODRAFT_443461 [Selaginella moellendorffii]
Length = 1386
Score = 1730 bits (4480), Expect = 0.0
Identities = 862/1195 (72%), Positives = 995/1195 (83%), Gaps = 26/1195 (2%)
Frame = -2
Query: 3620 VFLYNEVGKYKIF----VRHNNCWQKSF-STMEDDEVDYENERNLAAPVKTAVDKFQLLP 3456
+ LY E + KI H N +KSF D + + L APVKTAVDKFQLLP
Sbjct: 206 ICLYKEEEEEKITNPSPQHHKNTMRKSFFQEPRDYLLTRRSYAGLDAPVKTAVDKFQLLP 265
Query: 3455 AFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNFYLKY------------ 3312
AF KVRGLVKQH+DS+N+FVN EIKKIIHAK NEK+ S+ +PNFY+KY
Sbjct: 266 AFHKVRGLVKQHLDSYNYFVNCEIKKIIHAKGNEKITSDVDPNFYIKYACDTFQYFTNIL 325
Query: 3311 ---LDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKGK---G 3150
LDI V P +E+D + + TP QCRLRDMTY+API VD+EYTRG +I+ RKGK G
Sbjct: 326 FRFLDIFVGTPSIEQDYIRQDITPQQCRLRDMTYSAPISVDIEYTRGKDIITRKGKDGQG 385
Query: 3149 AITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRI 2970
A IGR+P+MLRS +CILTGKS+ ELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRI
Sbjct: 386 AQVIGRMPVMLRSSRCILTGKSDAELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRI 445
Query: 2969 LIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESDQ 2790
+ID+DS G THE+KSKT II+KHE Y+KLN F++DVPIV+V+KAMG+ESDQ
Sbjct: 446 IIDSDSTGSVTASVTSSTHERKSKTNIIIKHEKIYVKLNVFSDDVPIVVVMKAMGMESDQ 505
Query: 2789 EFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKVDEA 2610
E +QMVG DP+F GILAPS+Q CAS G+YT ALEYLGTKV+ R K +SKVDEA
Sbjct: 506 EIIQMVGTDPKFAGILAPSMQECASLGVYTTHQALEYLGTKVRVNRQWGSKQTKSKVDEA 565
Query: 2609 RDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELAGVL 2430
RDIL NVFLA+V VH++DFRPKCIYVA+MLRRM+EA+L+ E VDD+DYVGNKRLELAG L
Sbjct: 566 RDILLNVFLAHVAVHRYDFRPKCIYVALMLRRMLEAILDKECVDDRDYVGNKRLELAGQL 625
Query: 2429 IALLFEDLFKRMNQEIKSHVDKTFSKQ-RSTMFDVAKAIPPHIISYGLEHAISSGNWNVK 2253
+ALLFEDLFKR E+KS+VD+T SK R++ +DV+K++ P +++ GLE+AISSGNW VK
Sbjct: 626 LALLFEDLFKRSCSELKSNVDRTLSKMNRASQYDVSKSLKPDMLTSGLENAISSGNWTVK 685
Query: 2252 RFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPCDTPEG 2073
RF+MD+KGVTQVVSRLSYIA+LGHMTR+ SQFEK+RK WGMLCPCDTPEG
Sbjct: 686 RFRMDKKGVTQVVSRLSYIAALGHMTRVASQFEKSRK-----------WGMLCPCDTPEG 734
Query: 2072 EACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFNGLMLG 1893
E CGL KNLALMTH+TTD+EEAPLI LC LGVED++LLSGEE HS+ A+L++FNG +LG
Sbjct: 735 EGCGLTKNLALMTHITTDDEEAPLIDLCTNLGVEDINLLSGEEFHSKNAFLVMFNGTILG 794
Query: 1892 IHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNGISRIK 1713
IHR+P++FA +R LRRAGKIGEFVS+FVN+KQRC+Y+ASDGGRVCRP+VIAD+G+SRIK
Sbjct: 795 IHRRPQQFATLMRKLRRAGKIGEFVSIFVNEKQRCIYIASDGGRVCRPVVIADHGVSRIK 854
Query: 1712 EHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSHIEIEPFTILGV 1533
EHHMKEL+DGFRTFDDFLREGLVEYLDVNEENNALIALYE EA +T+HIEIEPFTILGV
Sbjct: 855 EHHMKELKDGFRTFDDFLREGLVEYLDVNEENNALIALYEKEADSTTTHIEIEPFTILGV 914
Query: 1532 CAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTKTIEL 1353
CAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL R+DTLLYLLVYPQRPLLTTK+IEL
Sbjct: 915 CAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLQRIDTLLYLLVYPQRPLLTTKSIEL 974
Query: 1352 VKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKHPNRTQ 1173
V YDKLGAGQNA+VAVMSYSGYDIEDAIVMNKASLDRGFGRCIV+KK+S +++K+ NRT
Sbjct: 975 VNYDKLGAGQNASVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVLKKFSCLVRKYENRTM 1034
Query: 1172 DRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNPMALPDS 993
DRI+ P Q LD DGIA+ GE I + DI++NK++P + NP+ALPDS
Sbjct: 1035 DRIVAPRQHG---HATSQLLDQDGIASVGERIYDKDIFVNKESPKDVKTTFLNPLALPDS 1091
Query: 992 EYKFTPQTYKAP--EPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRHGQKGVC 819
Y+ TPQ YK P E ++VDKV+LT+NE + IK R TRRPELGDKFSSRHGQKGVC
Sbjct: 1092 AYRPTPQRYKGPLGESAIVDKVLLTTNESQQMVIKCQVRHTRRPELGDKFSSRHGQKGVC 1151
Query: 818 GNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYGSAFGEP 639
G IV+Q+DFPF+ERG+CPDLIMNPHGFPSRMT+GKMIELLGGKAGV GK+HYGSAFGEP
Sbjct: 1152 GTIVEQQDFPFTERGVCPDLIMNPHGFPSRMTVGKMIELLGGKAGVQSGKYHYGSAFGEP 1211
Query: 638 SGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMVVDKMHA 459
SGHAD VE I ATLVKHGF Y GKDLIYSGITG PLQAYI+MGPIYYQKLKHMV+DKMHA
Sbjct: 1212 SGHADTVEAISATLVKHGFSYCGKDLIYSGITGCPLQAYIYMGPIYYQKLKHMVLDKMHA 1271
Query: 458 RASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFEIQVCTK 279
RA GPR++LTRQPTEGRSR+GGLRLGEMERDCL+AYG+SM+ILERLMISSDQF++QVCT
Sbjct: 1272 RAQGPRVVLTRQPTEGRSREGGLRLGEMERDCLVAYGSSMLILERLMISSDQFQVQVCTN 1331
Query: 278 CGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAEA 114
CGLLGYY+HKLKM FCS CK+GE +A MKLPYACKLLFQELQSMNIVPRLQLAEA
Sbjct: 1332 CGLLGYYSHKLKMNFCSYCKNGENMAAMKLPYACKLLFQELQSMNIVPRLQLAEA 1386
>ref|XP_002992124.1| hypothetical protein SELMODRAFT_430375 [Selaginella moellendorffii]
gi|300140050|gb|EFJ06779.1| hypothetical protein
SELMODRAFT_430375 [Selaginella moellendorffii]
Length = 1440
Score = 1721 bits (4456), Expect = 0.0
Identities = 860/1196 (71%), Positives = 993/1196 (83%), Gaps = 27/1196 (2%)
Frame = -2
Query: 3620 VFLYNEVGKYKIF----VRHNNCWQKSF-STMEDDEVDYENERNLAAPVKTAVDKFQLLP 3456
+ LY E + KI H N +KSF D + + L APVKTAVDKFQLLP
Sbjct: 266 ICLYKEEEEEKITNPSPQHHKNTMRKSFFQEPRDYLLTRRSYAGLDAPVKTAVDKFQLLP 325
Query: 3455 AFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNFYLKY------------ 3312
AF KVRGLVKQH+DS+N+FVN EIKKIIHAK NEK+ S+ +PNFY+KY
Sbjct: 326 AFHKVRGLVKQHLDSYNYFVNCEIKKIIHAKGNEKITSDVDPNFYIKYACDTFFQYFTNI 385
Query: 3311 ----LDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKGK--- 3153
LDI V P +E+D + + TP QCRLRDMTY+API VD+EYTRG +I+ RKGK
Sbjct: 386 LFRFLDIFVGTPSIEQDYIRQDITPQQCRLRDMTYSAPISVDIEYTRGKDIITRKGKDGQ 445
Query: 3152 GAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNR 2973
GA IGR+P+MLRS +CILTGKS+ ELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNR
Sbjct: 446 GAQVIGRMPVMLRSSRCILTGKSDAELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNR 505
Query: 2972 ILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESD 2793
I+ID+DS G ++ + H KLN F++DVPIV+V+KAMG+ESD
Sbjct: 506 IIIDSDSTG----------------SLSLAVH--MRGKLNVFSDDVPIVVVMKAMGMESD 547
Query: 2792 QEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKVDE 2613
QE +QMVG DP+F GILAPS+Q CAS G+YT ALEYLGTKV+ R K +SKVDE
Sbjct: 548 QEIIQMVGTDPKFAGILAPSMQECASLGVYTTHQALEYLGTKVRVNRQWGSKQTKSKVDE 607
Query: 2612 ARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELAGV 2433
ARDIL NVFLA+V VHK+DFRPKCIYVA+MLRRM+EA+L+ E VDD+DYVGNKRLELAG
Sbjct: 608 ARDILLNVFLAHVAVHKYDFRPKCIYVALMLRRMLEAILDKECVDDRDYVGNKRLELAGQ 667
Query: 2432 LIALLFEDLFKRMNQEIKSHVDKTFSKQ-RSTMFDVAKAIPPHIISYGLEHAISSGNWNV 2256
L+ALLFEDLFKR E+KS+VD+T SK R++ +DV+K++ P +++ GLE+AISSGNW V
Sbjct: 668 LLALLFEDLFKRSCSELKSNVDRTLSKMNRASQYDVSKSLKPDMLTSGLENAISSGNWTV 727
Query: 2255 KRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPCDTPE 2076
KRF+MD+KGVTQVVSRLSYIA+LGHMTR+ SQFEK+RKVSGPR+LQ SQWGMLCPCDTPE
Sbjct: 728 KRFRMDKKGVTQVVSRLSYIAALGHMTRVASQFEKSRKVSGPRSLQPSQWGMLCPCDTPE 787
Query: 2075 GEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFNGLML 1896
GE CGL KNLALMTH+TTD+EEAPLI LC LGVED++LLSGEE HS+ A+L++FNG +L
Sbjct: 788 GEGCGLTKNLALMTHITTDDEEAPLIDLCTNLGVEDINLLSGEEFHSKNAFLVMFNGTIL 847
Query: 1895 GIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNGISRI 1716
GIHR+P++FA +R LRRAGKIGEFVS+FVN+KQRC+Y+ASDGGRVCRP+VIAD+G+SRI
Sbjct: 848 GIHRRPQQFATLMRKLRRAGKIGEFVSIFVNEKQRCIYIASDGGRVCRPVVIADHGVSRI 907
Query: 1715 KEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSHIEIEPFTILG 1536
KEHHMKEL+DGFRTFDDFLREGLVEYLDVNEENNALIALYE EA +T+HIEIEPFTILG
Sbjct: 908 KEHHMKELKDGFRTFDDFLREGLVEYLDVNEENNALIALYEKEADSTTTHIEIEPFTILG 967
Query: 1535 VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTKTIE 1356
VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL R+DTLLYLLVYPQRPLLTTK+IE
Sbjct: 968 VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLQRIDTLLYLLVYPQRPLLTTKSIE 1027
Query: 1355 LVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKHPNRT 1176
LV YDKLGAGQNA+VAVMSYSGYDIEDAIVMNKASLDRGFGRCIV+KK+S +++K+ NRT
Sbjct: 1028 LVNYDKLGAGQNASVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVLKKFSCLVRKYENRT 1087
Query: 1175 QDRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNPMALPD 996
DRI+ P Q LD DGIA+ GE I + DI++NK++P + NP+ALPD
Sbjct: 1088 MDRIVAPRQHG---HATSQLLDQDGIASVGERIYDKDIFVNKESPKDVKTTFLNPLALPD 1144
Query: 995 SEYKFTPQTYKAP--EPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRHGQKGV 822
S Y+ TPQ YK P E ++VDKV+LT+NE + IK R TRRPELGDKFSSRHGQKGV
Sbjct: 1145 SAYRPTPQRYKGPLGESAIVDKVLLTTNESQQMVIKCQVRHTRRPELGDKFSSRHGQKGV 1204
Query: 821 CGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYGSAFGE 642
CG IV+Q+DFPF+ERG+CPDLIMNPHGFPSRMT+GKMIELLGGKAGV GK+HYGSAFGE
Sbjct: 1205 CGTIVEQQDFPFTERGVCPDLIMNPHGFPSRMTVGKMIELLGGKAGVQSGKYHYGSAFGE 1264
Query: 641 PSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMVVDKMH 462
PSGHAD VE I ATLVKHGF Y GKDLIYSGITG PLQAYI+MGPIYYQKLKHMV+DKMH
Sbjct: 1265 PSGHADTVEAISATLVKHGFSYCGKDLIYSGITGCPLQAYIYMGPIYYQKLKHMVLDKMH 1324
Query: 461 ARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFEIQVCT 282
ARA GPR++LTRQPTEGRSR+GGLRLGEMERDCL+AYG+SM+ILERLMISSDQF++QVCT
Sbjct: 1325 ARAQGPRVVLTRQPTEGRSREGGLRLGEMERDCLVAYGSSMLILERLMISSDQFQVQVCT 1384
Query: 281 KCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAEA 114
CGLLGYY+HKLKM FCS CK+GE +A MKLPYACKLLFQELQSMNIVPRLQLAEA
Sbjct: 1385 NCGLLGYYSHKLKMNFCSYCKNGENMAAMKLPYACKLLFQELQSMNIVPRLQLAEA 1440
>ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
X1 [Citrus sinensis] gi|568883651|ref|XP_006494573.1|
PREDICTED: DNA-directed RNA polymerase III subunit
RPC2-like isoform X2 [Citrus sinensis]
Length = 1149
Score = 1643 bits (4255), Expect = 0.0
Identities = 813/1138 (71%), Positives = 952/1138 (83%), Gaps = 4/1138 (0%)
Frame = -2
Query: 3515 NERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISEN 3336
+++ LAAPVK+ VDKFQLLP FLKVRGLVKQH+DSFN+FVN I+KI+ +AN++++S
Sbjct: 17 DKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIV--RANDRIVSGI 74
Query: 3335 NPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIV-VRK 3159
+P+ +L++ D+R+ +P + D + + PH CRL DMTYAAPI V++EY +G+
Sbjct: 75 DPSIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTM 134
Query: 3158 GKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSK 2979
K + IGR+PIMLRSC+C+L GK E ELA+LGECPLDPGGYF++KGTEKV+LIQEQLSK
Sbjct: 135 EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 194
Query: 2978 NRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIE 2799
NR++IDTD KG T KSKT+I ++ YL LN F + +PI++V+KAMGIE
Sbjct: 195 NRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGIE 254
Query: 2798 SDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKV 2619
SDQE VQMVGRDPR+ +L PS++ CA+ IYT+E ALEYL KVK FG+ ++R
Sbjct: 255 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDRE-- 312
Query: 2618 DEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELA 2439
A IL +VFLANVPVH +FRPKC YVAVMLRRM+EAMLN +A+DDKDYVGNKRLEL+
Sbjct: 313 GRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELS 372
Query: 2438 GVLIALLFEDLFKRMNQEIKSHVDKTFSK-QRSTMFDVAKAIPPHIISYGLEHAISSGNW 2262
G L++LLFEDLFK M E++ VD SK RS+ FD+++ I I+ GLE +S+GN+
Sbjct: 373 GQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNF 432
Query: 2261 NVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPCDT 2082
+VKRFKM RKG+TQV++RLS+I +LGHMTR+ QFEK+RKVSGPRALQ SQWGMLCPCDT
Sbjct: 433 DVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 492
Query: 2081 PEGEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFNGL 1902
PEGEACGLVKNLALMTHVTTDEEE PLI+LC+ LGVEDL LLSGEELH+ ++L+IFNGL
Sbjct: 493 PEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGL 552
Query: 1901 MLGIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNGIS 1722
+LG HR+PK FA +R LRRAGKIGEFVSVFVN+KQRCVY+ASDGGRVCRPLVIAD GIS
Sbjct: 553 ILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGIS 612
Query: 1721 RIKEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSHIEIEPFTI 1542
RIKEHHMKEL DG R+FDDFLREGL+EYLDVNEENNALIALYE +AT T+HIEIEPFTI
Sbjct: 613 RIKEHHMKELLDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTI 672
Query: 1541 LGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTKT 1362
LGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+NQLCRMD+LLYLLVYPQRPLLTT+T
Sbjct: 673 LGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRT 732
Query: 1361 IELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKHPN 1182
IELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV+KKY+A+ +K+ N
Sbjct: 733 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYAN 792
Query: 1181 RTQDRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNPMAL 1002
T DRI+ P +G R Q LD+DG+AAPGEII+ +D+YINK++P +TR + +P
Sbjct: 793 STSDRILRP-DRTGPGAERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQ 851
Query: 1001 PDSEYKFTPQTYKAP--EPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRHGQK 828
DS Y+ QTYK P E VVD+V L S++ L IKFL R TRRPELGDKFSSRHGQK
Sbjct: 852 TDSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQK 911
Query: 827 GVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYGSAF 648
GVCG IVQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGV CG+FHYGSAF
Sbjct: 912 GVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAF 971
Query: 647 GEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMVVDK 468
GEPSGHAD VE+I TLVKHGF Y+GKD+IYSGITG PLQAYIFMGPIYYQKLKHMV+DK
Sbjct: 972 GEPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDK 1031
Query: 467 MHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFEIQV 288
MHAR SGPR+MLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I ERLM+SSD FE+QV
Sbjct: 1032 MHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQV 1091
Query: 287 CTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAEA 114
C CGLLGYYNHKLK G CSTCK+G+ I++MKLPYACKLL QELQSMNIVPRL+LAEA
Sbjct: 1092 CRVCGLLGYYNHKLKAGICSTCKNGDNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1149
>ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina]
gi|557534507|gb|ESR45625.1| hypothetical protein
CICLE_v10000078mg [Citrus clementina]
Length = 1149
Score = 1642 bits (4253), Expect = 0.0
Identities = 812/1138 (71%), Positives = 951/1138 (83%), Gaps = 4/1138 (0%)
Frame = -2
Query: 3515 NERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISEN 3336
+++ LAAPVK+ VDKFQLLP FLKVRGLVKQH+DSFN+FVN I+KI+ +AN++++S
Sbjct: 17 DKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIV--RANDRIVSGI 74
Query: 3335 NPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIV-VRK 3159
+P+ +L++ D+R+ +P + D + + PH CRL DMTYAAPI V++EY +G+
Sbjct: 75 DPSIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTM 134
Query: 3158 GKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSK 2979
K + IGR+PIMLRSC+C+L GK E ELA+LGECPLDPGGYF++KGTEKV+LIQEQLSK
Sbjct: 135 EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 194
Query: 2978 NRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIE 2799
NR++IDTD KG T KSKT+I ++ YL LN F + +PI++V+KAMG+E
Sbjct: 195 NRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGME 254
Query: 2798 SDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKV 2619
SDQE VQMVGRDPR+ +L PS++ CA+ IYT+E ALEYL KVK FG+ ++R
Sbjct: 255 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDRE-- 312
Query: 2618 DEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELA 2439
A IL +VFLANVPVH +FRPKC YVAVMLRRM+EAMLN +A+DDKDYVGNKRLEL+
Sbjct: 313 GRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELS 372
Query: 2438 GVLIALLFEDLFKRMNQEIKSHVDKTFSK-QRSTMFDVAKAIPPHIISYGLEHAISSGNW 2262
G L++LLFEDLFK M E++ VD SK RS+ FD+++ I I+ GLE +S+GN+
Sbjct: 373 GQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNF 432
Query: 2261 NVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPCDT 2082
+VKRFKM RKG+TQV++RLS+I +LGHMTR+ QFEK+RKVSGPRALQ SQWGMLCPCDT
Sbjct: 433 DVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 492
Query: 2081 PEGEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFNGL 1902
PEGEACGLVKNLALMTHVTTDEEE PLI+LC+ LGVEDL LLSGEELH+ ++L+IFNGL
Sbjct: 493 PEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGL 552
Query: 1901 MLGIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNGIS 1722
+LG HR+PK FA +R LRRAGKIGEFVSVFVN+KQRCVY+ASDGGRVCRPLVIAD GIS
Sbjct: 553 ILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGIS 612
Query: 1721 RIKEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSHIEIEPFTI 1542
RIKEHHMKEL DG R+FDDFLREGL+EYLDVNEENNALIALYE +AT T+HIEIEPFTI
Sbjct: 613 RIKEHHMKELSDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTI 672
Query: 1541 LGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTKT 1362
LGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+NQLCRMD+LLYLLVYPQRPLLTT+T
Sbjct: 673 LGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRT 732
Query: 1361 IELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKHPN 1182
IELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV+KKY+A+ +K+ N
Sbjct: 733 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYAN 792
Query: 1181 RTQDRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNPMAL 1002
T DRI+ P +G R Q LD+DG+AAPGEII+ +D+YINK++P +TR + +P
Sbjct: 793 STSDRILRP-DRTGPGSERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQ 851
Query: 1001 PDSEYKFTPQTYKAP--EPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRHGQK 828
DS Y+ QTYK P E VVD+V L S++ L IKFL R TRRPELGDKFSSRHGQK
Sbjct: 852 TDSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQK 911
Query: 827 GVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYGSAF 648
GVCG IVQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGV CG+FHYGSAF
Sbjct: 912 GVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAF 971
Query: 647 GEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMVVDK 468
GEPSGHAD VE+I TLVKHGF Y+GKD+IYSGITG PLQAYIFMGPIYYQKLKHMV+DK
Sbjct: 972 GEPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDK 1031
Query: 467 MHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFEIQV 288
MHAR SGPR+MLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I ERLM+SSD FE+QV
Sbjct: 1032 MHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQV 1091
Query: 287 CTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAEA 114
C CGLLGYYNHKLK G CSTCK+G I++MKLPYACKLL QELQSMNIVPRL+LAEA
Sbjct: 1092 CRVCGLLGYYNHKLKAGICSTCKNGNNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1149
>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
vinifera]
Length = 1142
Score = 1642 bits (4251), Expect = 0.0
Identities = 815/1136 (71%), Positives = 952/1136 (83%), Gaps = 7/1136 (0%)
Frame = -2
Query: 3500 AAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNFY 3321
A PVK AVDKF LLP FLKVRGLVKQH+DSFN+FV +IKKI+ +AN++++S +P+ Y
Sbjct: 12 ADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIV--RANDRIVSSVDPSIY 69
Query: 3320 LKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIV-VRKGKGAI 3144
L++ D+R+ P + D + + PH CRL DMTYAAPI V++EY G+ + R K +
Sbjct: 70 LRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGSHVQKTRVEKNDV 129
Query: 3143 TIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRILI 2964
IGR+PIMLRSC C+L K E ELA+LGECPLDPGGYFVVKGTEKVILIQEQLSKNRI+I
Sbjct: 130 VIGRMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIII 189
Query: 2963 DTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESDQEF 2784
DTD KG T KSKT+I+++ E +L+LN FT +PI+IV+KAMG+ESDQE
Sbjct: 190 DTDKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIPIMIVMKAMGMESDQEV 249
Query: 2783 VQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKVDEARD 2604
VQMVGR+PR+ +L PS++ CAS+GIYT++ ALE+L KVK + F N E K
Sbjct: 250 VQMVGRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLPFYNPSLE--KEGRGMA 307
Query: 2603 ILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELAGVLIA 2424
IL + F+ANVPV + +FRPKC+YVAVMLRRM++A+LN +A+DDKDYVGNKRLEL+G LI+
Sbjct: 308 ILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLELSGQLIS 367
Query: 2423 LLFEDLFKRMNQEIKSHVDKTFSK-QRSTMFDVAKA---IPPHIISYGLEHAISSGNWNV 2256
LLFEDLFK M E+K +D +K RS+ FD ++ I I+ GLE +S+GNW+V
Sbjct: 368 LLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQCLRFIVRDSITVGLERTLSTGNWDV 427
Query: 2255 KRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPCDTPE 2076
KRF+M RKG++QVV+RLSYI SLGHMT+I QFEK+RKVSGPRALQ SQWGMLCPCDTPE
Sbjct: 428 KRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 487
Query: 2075 GEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFNGLML 1896
GEACGLVKNLALMTHVTTDEEE+PLI+LC++LGVEDL LLSGEELH+ ++LIIFNGL+L
Sbjct: 488 GEACGLVKNLALMTHVTTDEEESPLISLCYSLGVEDLELLSGEELHTPNSFLIIFNGLIL 547
Query: 1895 GIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNGISRI 1716
G HR+P+RFA+ LR LRRAGKIGEFVSVFVN+KQ CVY+ASDGGRVCRP+VIAD G SRI
Sbjct: 548 GKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPVVIADKGKSRI 607
Query: 1715 KEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSHIEIEPFTILG 1536
KEHHMKEL DG RTFDDFLR+GL+EYLDVNEENNALIALYE++A T+HIEIEPFTILG
Sbjct: 608 KEHHMKELIDGVRTFDDFLRDGLIEYLDVNEENNALIALYEADAKPETTHIEIEPFTILG 667
Query: 1535 VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTKTIE 1356
VCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMD+LLYLLVYPQRPLLTT+TIE
Sbjct: 668 VCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLTTRTIE 727
Query: 1355 LVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKHPNRT 1176
LV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK+SAV +++ N
Sbjct: 728 LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKFSAVNQRYENNA 787
Query: 1175 QDRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNPMALPD 996
DRI+ P G R Q LD+DG+AAPGEII+ +DIYINK++P T+ + +P+ LPD
Sbjct: 788 SDRIVRPL-KVGHDAERMQILDDDGLAAPGEIIKPNDIYINKESPIITKGPLISPVGLPD 846
Query: 995 SEYKFTPQTYKAP--EPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRHGQKGV 822
S YK + QT+K P E SVVD+V L S++ L IKFL R TRRPE+GDKFSSRHGQKGV
Sbjct: 847 SAYKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHTRRPEVGDKFSSRHGQKGV 906
Query: 821 CGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYGSAFGE 642
CG I+QQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGV CG+FHYGSAFGE
Sbjct: 907 CGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGE 966
Query: 641 PSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMVVDKMH 462
PSGHADKVETI TLVKHGF YSGKD IYSGITG PLQAYIFMGPIYYQKLKHMV+DKMH
Sbjct: 967 PSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMH 1026
Query: 461 ARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFEIQVCT 282
AR SGPR+MLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I ERLM+SSD FE+QVC
Sbjct: 1027 ARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCR 1086
Query: 281 KCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAEA 114
CGLLGYYNHKLK+G CSTCK+G+ I+TMKLPYACKLLFQELQ+MN+VPRL+L EA
Sbjct: 1087 VCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPRLKLTEA 1142
>gb|EOY19609.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
Length = 1158
Score = 1623 bits (4202), Expect = 0.0
Identities = 809/1166 (69%), Positives = 953/1166 (81%), Gaps = 5/1166 (0%)
Frame = -2
Query: 3596 KYKIFVRHNNCWQKSFSTMEDDEVDYENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHI 3417
K + + +NN + S M D+ + LAAP+K+AVDKFQLLP FLKVRGLVKQH+
Sbjct: 4 KQEDLLLNNNTNNSNVSEMPVDK------QKLAAPIKSAVDKFQLLPEFLKVRGLVKQHL 57
Query: 3416 DSFNFFVNHEIKKIIHAKANEKVISENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCR 3237
DSFN+FVN IKKI+ +AN++++S +P+ YL++ D+R+ P + + + + PH CR
Sbjct: 58 DSFNYFVNTGIKKIV--RANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCR 115
Query: 3236 LRDMTYAAPIKVDVEYTRGNE-IVVRKGKGAITIGRLPIMLRSCQCILTGKSETELAKLG 3060
L DMTYAAPI V++EY +G+ R K + IGR+PIMLRSC C+L GK E ELA+LG
Sbjct: 116 LSDMTYAAPIFVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLG 175
Query: 3059 ECPLDPGGYFVVKGTEKVILIQEQLSKNRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVK 2880
ECPLDPGGYFV+KG EKVILIQEQLSKNRI+ID D KG + KSKT+I ++
Sbjct: 176 ECPLDPGGYFVIKGAEKVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQME 235
Query: 2879 HEIFYLKLNTFTEDVPIVIVVKAMGIESDQEFVQMVGRDPRFGGILAPSLQNCASYGIYT 2700
E YL LN F + +PI++V+KAMG+ESDQE VQMVGRDP + +L PS++ CA GIYT
Sbjct: 236 KEKIYLLLNQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYT 295
Query: 2699 KELALEYLGTKVKSMRFGNEKSERSKVDEARDILHNVFLANVPVHKFDFRPKCIYVAVML 2520
+E ALEYL TKVK + + SE K A IL +VFLANVPV +FRPKC+YVAVML
Sbjct: 296 QEQALEYLETKVKRVMYTGPASE--KEGRALSILRDVFLANVPVRSNNFRPKCLYVAVML 353
Query: 2519 RRMIEAMLNPEAVDDKDYVGNKRLELAGVLIALLFEDLFKRMNQEIKSHVDKTFSK-QRS 2343
RRM+EA+LN +A+DDKDYVGNKRLEL+G LI+LLFEDLFK E++ +D SK RS
Sbjct: 354 RRMVEAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRS 413
Query: 2342 TMFDVAKAIPPH-IISYGLEHAISSGNWNVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQ 2166
+ D ++ + I++GLE +S+GN+++KRFKM RKG+TQV++RLS+I +LG+MT++
Sbjct: 414 SALDPSQFLRSRETITFGLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVS 473
Query: 2165 SQFEKTRKVSGPRALQSSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLITLCH 1986
QFEK+RKVSGPRALQ SQWGMLCPCDTPEGEACGLVKNLALMTHVTTDE+E PLI+LC+
Sbjct: 474 PQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCY 533
Query: 1985 TLGVEDLSLLSGEELHSRKAYLIIFNGLMLGIHRQPKRFAHFLRILRRAGKIGEFVSVFV 1806
LGVEDL LLSGEELH+ ++L+I NGL+LG HR+P+ FA +R LRRAGK+GEFVSVFV
Sbjct: 534 CLGVEDLELLSGEELHTPNSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFV 593
Query: 1805 NDKQRCVYVASDGGRVCRPLVIADNGISRIKEHHMKELRDGFRTFDDFLREGLVEYLDVN 1626
N+KQRCVY+ASDGGRVCRPLVIAD G+SRIKEHHMKEL DG RTFDDFLR+GL+EYLDVN
Sbjct: 594 NEKQRCVYIASDGGRVCRPLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVN 653
Query: 1625 EENNALIALYESEATESTSHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGN 1446
EENNALIALYE EAT T+HIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGN
Sbjct: 654 EENNALIALYEGEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGN 713
Query: 1445 IAYNQLCRMDTLLYLLVYPQRPLLTTKTIELVKYDKLGAGQNATVAVMSYSGYDIEDAIV 1266
IAYNQLCRMDTLLYLLVYPQRPLLTT+TIELV YDKLGAGQNATVAVMSYSGYDIEDAIV
Sbjct: 714 IAYNQLCRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIV 773
Query: 1265 MNKASLDRGFGRCIVMKKYSAVLKKHPNRTQDRIIGPTSSSGRVDTRCQALDNDGIAAPG 1086
MNK+SLDRGFGRCIVMK+YSAV +K+ DRI+ P +G R Q LD+DGIA PG
Sbjct: 774 MNKSSLDRGFGRCIVMKRYSAVNQKYETGASDRILRP-QRTGPGSERMQILDDDGIATPG 832
Query: 1085 EIIRNHDIYINKQTPTKTREEVKNPMALPDSEYKFTPQTYKAP--EPSVVDKVVLTSNEE 912
EIIR +DIYINK++ TR + +LPDS Y+ QTYK P E VVD+V L ++
Sbjct: 833 EIIRPNDIYINKESSIHTRGSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRN 892
Query: 911 DALNIKFLFRQTRRPELGDKFSSRHGQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPS 732
L+IKFL R TRRPE+GDKFSSRHGQKGVCG I+QQEDFPFSERGICPDLIMNPHGFPS
Sbjct: 893 SNLSIKFLIRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPS 952
Query: 731 RMTIGKMIELLGGKAGVCCGKFHYGSAFGEPSGHADKVETICATLVKHGFCYSGKDLIYS 552
RMT+GKMIELLGGKAGV CG+FHYGSAFGEPSGHAD+VE I TL+KHGF Y+GKD IYS
Sbjct: 953 RMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYS 1012
Query: 551 GITGYPLQAYIFMGPIYYQKLKHMVVDKMHARASGPRMMLTRQPTEGRSRDGGLRLGEME 372
GITG PLQAYIFMGPIYYQKLKHMV+DKMHAR +GPR+MLTRQPTEGR+R+GGLR+GEME
Sbjct: 1013 GITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEME 1072
Query: 371 RDCLIAYGASMMILERLMISSDQFEIQVCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMK 192
RDCLIAYGASM+I ERLMISSD FE+QVC KCGLLGYY+HKLK G CS+CK+G+ ++TMK
Sbjct: 1073 RDCLIAYGASMLIFERLMISSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMK 1132
Query: 191 LPYACKLLFQELQSMNIVPRLQLAEA 114
LPYACKLL QELQSMNIVPRL+L+EA
Sbjct: 1133 LPYACKLLIQELQSMNIVPRLKLSEA 1158
>ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Solanum
lycopersicum]
Length = 1183
Score = 1617 bits (4186), Expect = 0.0
Identities = 807/1155 (69%), Positives = 941/1155 (81%), Gaps = 5/1155 (0%)
Frame = -2
Query: 3563 WQKSFSTMEDDEVDYENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEI 3384
+ + S +D ++++LA+ +K VDK+QL+P FLKVRGLVKQH+DSFN+FV EI
Sbjct: 33 YDSTMSNTTEDSNQGIDKQHLASHIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEI 92
Query: 3383 KKIIHAKANEKVISENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIK 3204
KKI+ +AN+++ S +PN YL+Y D+ + P + D + + P +CRL D TYAAPI
Sbjct: 93 KKIV--RANQEIRSTLDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIY 150
Query: 3203 VDVEYTRGN--EIVVRKGKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYF 3030
V ++YT G+ + V K I IGR+PIMLRS C+L GK E ELA+LGECPLDPGGYF
Sbjct: 151 VTIDYTTGSHGQTSVSTKKNVI-IGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYF 209
Query: 3029 VVKGTEKVILIQEQLSKNRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNT 2850
V+KGTEKVILIQEQLSKNRI+IDTD KG T + KSKTII ++ E YL+LN
Sbjct: 210 VIKGTEKVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNM 269
Query: 2849 FTEDVPIVIVVKAMGIESDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGT 2670
F VPI++V+KAMG+ESDQE VQM+GRDPRF +L PS++ CA +YT++ ALE+L +
Sbjct: 270 FKTKVPIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQQQALEFLES 329
Query: 2669 KVKSMRFGNEKSERSKVDEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNP 2490
K A IL ++FLANVPVH+ +FR KCIYVAVM+RRM+EA+LN
Sbjct: 330 DKMLKMPSYSTGPIEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNK 389
Query: 2489 EAVDDKDYVGNKRLELAGVLIALLFEDLFKRMNQEIKSHVDKTFSK-QRSTMFDVAKAIP 2313
+A+DDKDYVGNKRLEL+G L++LLFEDLFK MN E + +D ++ RS+ D+++ I
Sbjct: 390 DAMDDKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYII 449
Query: 2312 PHIISYGLEHAISSGNWNVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSG 2133
I+ GLE +S+GNW+VKRF+M RKG+TQVV+RLSYI SLGHMT+I QFEK+RKVSG
Sbjct: 450 KDSITMGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSG 509
Query: 2132 PRALQSSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLS 1953
PRALQ SQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDE+E P+++LC+ LGVEDL LS
Sbjct: 510 PRALQPSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLS 569
Query: 1952 GEELHSRKAYLIIFNGLMLGIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVAS 1773
EELH +YLI NGL+LG H+ P+RFA+ +R LRRAGK+GEFVS+FVN+KQRCVY+AS
Sbjct: 570 PEELHMPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKVGEFVSIFVNEKQRCVYIAS 629
Query: 1772 DGGRVCRPLVIADNGISRIKEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYE 1593
DGGRVCRPLVIAD G+SRIKEHHM+ELRDG R FD FL++GL+EYLDVNEENN LIALYE
Sbjct: 630 DGGRVCRPLVIADKGVSRIKEHHMRELRDGLRDFDSFLKDGLIEYLDVNEENNTLIALYE 689
Query: 1592 SEATESTSHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 1413
EAT T+HIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD
Sbjct: 690 KEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDG 749
Query: 1412 LLYLLVYPQRPLLTTKTIELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFG 1233
LLYLLVYPQRPLLTT+TIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFG
Sbjct: 750 LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 809
Query: 1232 RCIVMKKYSAVLKKHPNRTQDRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYIN 1053
RCIVMKKYSA+ +K+ N T DRII P D R Q LD+DG+AAPGE IRNHDIYIN
Sbjct: 810 RCIVMKKYSAICQKYENGTSDRIIKPQRQGPEAD-RMQILDDDGMAAPGETIRNHDIYIN 868
Query: 1052 KQTPTKTREEVKNPMALPDSEYKFTPQTYKAP--EPSVVDKVVLTSNEEDALNIKFLFRQ 879
K++PT TR V +PM LPDS YK + QTYK P E +VVD+V L S+ + L+IKF+ R
Sbjct: 869 KESPTVTRTPVTSPMGLPDSAYKSSKQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRH 928
Query: 878 TRRPELGDKFSSRHGQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELL 699
TRRPELGDKFSSRHGQKGVCG IVQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELL
Sbjct: 929 TRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELL 988
Query: 698 GGKAGVCCGKFHYGSAFGEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYI 519
G KAGV CG+FHYGSAFGEPSGHAD V+ I TLVKHGF Y+GKD IYSGITG PLQAYI
Sbjct: 989 GSKAGVSCGRFHYGSAFGEPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYI 1048
Query: 518 FMGPIYYQKLKHMVVDKMHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASM 339
FMGPIYYQKLKHMVVDKMHAR SGPR+M+TRQPTEGRSR+GGLR+GEMERDCLIAYGASM
Sbjct: 1049 FMGPIYYQKLKHMVVDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASM 1108
Query: 338 MILERLMISSDQFEIQVCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQE 159
+I ERLMISSD FE+QVC KCGLLGYYN+KLK G CS CK+GE I+TMKLPYACKLLFQE
Sbjct: 1109 LIYERLMISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQE 1168
Query: 158 LQSMNIVPRLQLAEA 114
LQSMNIVPRL+LAEA
Sbjct: 1169 LQSMNIVPRLKLAEA 1183
>ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
X1 [Solanum tuberosum] gi|565393087|ref|XP_006362215.1|
PREDICTED: DNA-directed RNA polymerase III subunit
RPC2-like isoform X2 [Solanum tuberosum]
Length = 1153
Score = 1616 bits (4185), Expect = 0.0
Identities = 806/1155 (69%), Positives = 942/1155 (81%), Gaps = 5/1155 (0%)
Frame = -2
Query: 3563 WQKSFSTMEDDEVDYENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEI 3384
+ + S +D ++++LA+P+K VDK+QL+P FLKVRGLVKQH+DSFN+FV EI
Sbjct: 3 YDSTMSNTTEDSNQGIDKQHLASPIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEI 62
Query: 3383 KKIIHAKANEKVISENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIK 3204
KKI+ +AN+++ S +PN YL+Y D+ + P + D + + P +CRL D TYAAPI
Sbjct: 63 KKIV--RANQEIRSILDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIY 120
Query: 3203 VDVEYTRGN--EIVVRKGKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYF 3030
V +EYT G+ + V K I IGR+PIMLRS C+L GK E ELA+LGECPLDPGGYF
Sbjct: 121 VTIEYTTGSHGQTSVSTKKNVI-IGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYF 179
Query: 3029 VVKGTEKVILIQEQLSKNRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNT 2850
V+KGTEKVILIQEQLSKNRI+IDTD KG T + KSKTII ++ E YL+LN
Sbjct: 180 VIKGTEKVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNM 239
Query: 2849 FTEDVPIVIVVKAMGIESDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGT 2670
F VPI++V+KAMG+ESDQE VQM+GRDPRF +L PS++ CA +YT+ ALE+L +
Sbjct: 240 FKTKVPIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQHQALEFLES 299
Query: 2669 KVKSMRFGNEKSERSKVDEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNP 2490
K A IL ++FLANVPVH+ +FR KCIYVAVM+RRM+EA+LN
Sbjct: 300 DKMLKMPSYSTGPVEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNK 359
Query: 2489 EAVDDKDYVGNKRLELAGVLIALLFEDLFKRMNQEIKSHVDKTFSK-QRSTMFDVAKAIP 2313
+A+DDKDYVGNKRLEL+G L++LLFEDLFK MN E + +D ++ RS+ D+++ I
Sbjct: 360 DAMDDKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIV 419
Query: 2312 PHIISYGLEHAISSGNWNVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSG 2133
I+ GLE +S+GNW+VKRF+M RKG+TQVV+RLSYI SLGHMT+I QFEK+RKVSG
Sbjct: 420 KDSITMGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSG 479
Query: 2132 PRALQSSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLS 1953
PRALQ SQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDE+E P+++LC+ LGVEDL LS
Sbjct: 480 PRALQPSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLS 539
Query: 1952 GEELHSRKAYLIIFNGLMLGIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVAS 1773
EELH +YLI NGL+LG H+ P+RFA+ +R LRRAGKIGEFVS+FVN+KQRCVY+AS
Sbjct: 540 PEELHMPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKIGEFVSIFVNEKQRCVYIAS 599
Query: 1772 DGGRVCRPLVIADNGISRIKEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYE 1593
DGGRVCRPLVIAD G+SRIKEHHM+ELRDG R FD FL++GL+EYLDVNEENN LIALYE
Sbjct: 600 DGGRVCRPLVIADKGVSRIKEHHMRELRDGVRDFDSFLKDGLIEYLDVNEENNTLIALYE 659
Query: 1592 SEATESTSHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 1413
EAT T+HIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD
Sbjct: 660 KEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDG 719
Query: 1412 LLYLLVYPQRPLLTTKTIELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFG 1233
LLYLLVYPQRPLLTT+TIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFG
Sbjct: 720 LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 779
Query: 1232 RCIVMKKYSAVLKKHPNRTQDRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYIN 1053
RCIVMKKYSA+ +K+ N T DRII P D + Q LD+DG+AAPGE IRNHDIYIN
Sbjct: 780 RCIVMKKYSAICQKYENGTSDRIIKPQRQGFEAD-KMQILDDDGMAAPGETIRNHDIYIN 838
Query: 1052 KQTPTKTREEVKNPMALPDSEYKFTPQTYKAP--EPSVVDKVVLTSNEEDALNIKFLFRQ 879
K++PT TR + +PM LPDS YK + QTYK P E +VVD+V L S+ + L+IKF+ R
Sbjct: 839 KESPTVTRTPITSPMGLPDSAYKTSRQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRH 898
Query: 878 TRRPELGDKFSSRHGQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELL 699
TRRPE+GDKFSSRHGQKGVCG IVQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELL
Sbjct: 899 TRRPEIGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELL 958
Query: 698 GGKAGVCCGKFHYGSAFGEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYI 519
G KAGV CG+FHYGSAFGEPSGHAD V++I TLVKHGF Y+GKD IYSGITG PLQAYI
Sbjct: 959 GSKAGVSCGRFHYGSAFGEPSGHADTVDSISETLVKHGFSYNGKDFIYSGITGMPLQAYI 1018
Query: 518 FMGPIYYQKLKHMVVDKMHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASM 339
FMGPIYYQKLKHMV+DKMHAR SGPR+M+TRQPTEGRSR+GGLR+GEMERDCLIAYGASM
Sbjct: 1019 FMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASM 1078
Query: 338 MILERLMISSDQFEIQVCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQE 159
+I ERLMISSD FE+QVC KCGLLGYYN+KLK G CS CK+GE I+TMKLPYACKLLFQE
Sbjct: 1079 LIYERLMISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQE 1138
Query: 158 LQSMNIVPRLQLAEA 114
LQSMNIVPRL+LAEA
Sbjct: 1139 LQSMNIVPRLKLAEA 1153
>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
sativus]
Length = 1158
Score = 1612 bits (4174), Expect = 0.0
Identities = 804/1147 (70%), Positives = 951/1147 (82%), Gaps = 6/1147 (0%)
Frame = -2
Query: 3536 DDEVDYENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKAN 3357
D ++D ++ + P+K+AVDKFQLLP FLKVRGLVKQH+DSFN+FVN EIKKI+ KAN
Sbjct: 23 DSDID---KQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTEIKKIV--KAN 77
Query: 3356 EKVISENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGN 3177
+++ S +P+ YL++LD+R+ P + + + PH CRL D+TYAAPI VD+EY +
Sbjct: 78 DRIESSTDPSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSDLTYAAPILVDIEYIEES 137
Query: 3176 EIV-VRKGKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVIL 3000
+ K + IGR+PIMLRS C+L GK E ELA+LGECPLDPGGYF++KGTEKV+L
Sbjct: 138 HAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFIIKGTEKVVL 197
Query: 2999 IQEQLSKNRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTED-VPIVI 2823
IQEQLSKNRI+IDTD KG T KSKT+I +++E YL+LN FT +PI++
Sbjct: 198 IQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFTTPKIPIMV 257
Query: 2822 VVKAMGIESDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGN 2643
V+KAMG+ES QE VQMVGRDPR+G +L PS++ CA IYT+E ALEYL TKVK +F +
Sbjct: 258 VLKAMGMESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETKVKKFQFAS 317
Query: 2642 EKSERSKVDEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYV 2463
E K A IL +VFLANVPV+K +F PKCIYVAVM+RRM++A+L+ +A+DDKDYV
Sbjct: 318 APPE--KEGRALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAMDDKDYV 375
Query: 2462 GNKRLELAGVLIALLFEDLFKRMNQEIKSHVDKTFSKQ-RSTMFDVAKAIPPHIISYGLE 2286
GNKRLEL+G LI+LLFEDLFK M E+K +DK K RS+ FD ++ + +IIS+GLE
Sbjct: 376 GNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNIISFGLE 435
Query: 2285 HAISSGNWNVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQW 2106
+S+GNW+VKRF+M RKG++QV++RLS+I+++GH+TR+ QFEK+RKVSGPRALQ SQW
Sbjct: 436 RTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQW 495
Query: 2105 GMLCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKA 1926
GMLCPCDTPEGEACGLVKNLALMTHVTTD+EE PLI+LC+ LGVEDL LLS EELH+ +
Sbjct: 496 GMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEELHTPNS 555
Query: 1925 YLIIFNGLMLGIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPL 1746
+L+IFNG +LG HR+P+ FA +R+LRRAGKIGEFVSVFVN+KQ CVY+ASDGGRVCRPL
Sbjct: 556 FLVIFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPL 615
Query: 1745 VIADNGISRIKEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSH 1566
VIAD G+SRIKE+HMKEL DG RTFDDFLR+GL+EYLDVNEENNALIALYE EAT T+H
Sbjct: 616 VIADKGVSRIKEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTH 675
Query: 1565 IEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQ 1386
IEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTLLYLLVYPQ
Sbjct: 676 IEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVYPQ 735
Query: 1385 RPLLTTKTIELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYS 1206
RPLLTTKTIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV KKYS
Sbjct: 736 RPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVFKKYS 795
Query: 1205 AVLKKHPNRTQDRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTRE 1026
+V +K+ N T DRI+ P + Q LD+DG+AAPGEIIR +DIY+NKQ+P +
Sbjct: 796 SVNQKYENNTADRIVRPNRNED-FTGNMQILDDDGLAAPGEIIRPNDIYVNKQSPIIMK- 853
Query: 1025 EVKNPM-ALPDSEYKFTPQTYKAP--EPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGD 855
+P+ +PD+ Y+ Q +K EP+VVD+V L++++ D L IKFL RQTRRPELGD
Sbjct: 854 --GSPLPGIPDNAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRPELGD 911
Query: 854 KFSSRHGQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCC 675
KFSSRHGQKGVCG IVQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGV C
Sbjct: 912 KFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSC 971
Query: 674 GKFHYGSAFGEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQ 495
G+FHYGSAFGEPSGHADKV+ I TL+K GF Y+GKD +YSGITG PLQAYIFMGPIYYQ
Sbjct: 972 GRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQ 1031
Query: 494 KLKHMVVDKMHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMI 315
KLKHMV+DKMHAR SGPR+MLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I ERLMI
Sbjct: 1032 KLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMI 1091
Query: 314 SSDQFEIQVCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVP 135
SSD FE+QVC CGLLGYYNHKLK G CS+CK+G+ I+TMKLPYACKLL QELQSMNIVP
Sbjct: 1092 SSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVP 1151
Query: 134 RLQLAEA 114
RL+LAEA
Sbjct: 1152 RLKLAEA 1158
>gb|EOY19611.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
Length = 1153
Score = 1608 bits (4165), Expect = 0.0
Identities = 804/1166 (68%), Positives = 948/1166 (81%), Gaps = 5/1166 (0%)
Frame = -2
Query: 3596 KYKIFVRHNNCWQKSFSTMEDDEVDYENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHI 3417
K + + +NN + S M D+ + LAAP+K+AVDKFQLLP FLKVRGLVKQH+
Sbjct: 4 KQEDLLLNNNTNNSNVSEMPVDK------QKLAAPIKSAVDKFQLLPEFLKVRGLVKQHL 57
Query: 3416 DSFNFFVNHEIKKIIHAKANEKVISENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCR 3237
DSFN+FVN IKKI+ +AN++++S +P+ YL++ D+R+ P + + + + PH CR
Sbjct: 58 DSFNYFVNTGIKKIV--RANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCR 115
Query: 3236 LRDMTYAAPIKVDVEYTRGNE-IVVRKGKGAITIGRLPIMLRSCQCILTGKSETELAKLG 3060
L DMTYAAPI V++EY +G+ R K + IGR+PIMLRSC C+L GK E ELA+LG
Sbjct: 116 LSDMTYAAPIFVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLG 175
Query: 3059 ECPLDPGGYFVVKGTEKVILIQEQLSKNRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVK 2880
ECPLDPGGYFV+KG EK EQLSKNRI+ID D KG + KSKT+I ++
Sbjct: 176 ECPLDPGGYFVIKGAEK-----EQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQME 230
Query: 2879 HEIFYLKLNTFTEDVPIVIVVKAMGIESDQEFVQMVGRDPRFGGILAPSLQNCASYGIYT 2700
E YL LN F + +PI++V+KAMG+ESDQE VQMVGRDP + +L PS++ CA GIYT
Sbjct: 231 KEKIYLLLNQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYT 290
Query: 2699 KELALEYLGTKVKSMRFGNEKSERSKVDEARDILHNVFLANVPVHKFDFRPKCIYVAVML 2520
+E ALEYL TKVK + + SE K A IL +VFLANVPV +FRPKC+YVAVML
Sbjct: 291 QEQALEYLETKVKRVMYTGPASE--KEGRALSILRDVFLANVPVRSNNFRPKCLYVAVML 348
Query: 2519 RRMIEAMLNPEAVDDKDYVGNKRLELAGVLIALLFEDLFKRMNQEIKSHVDKTFSK-QRS 2343
RRM+EA+LN +A+DDKDYVGNKRLEL+G LI+LLFEDLFK E++ +D SK RS
Sbjct: 349 RRMVEAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRS 408
Query: 2342 TMFDVAKAIPPH-IISYGLEHAISSGNWNVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQ 2166
+ D ++ + I++GLE +S+GN+++KRFKM RKG+TQV++RLS+I +LG+MT++
Sbjct: 409 SALDPSQFLRSRETITFGLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVS 468
Query: 2165 SQFEKTRKVSGPRALQSSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLITLCH 1986
QFEK+RKVSGPRALQ SQWGMLCPCDTPEGEACGLVKNLALMTHVTTDE+E PLI+LC+
Sbjct: 469 PQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCY 528
Query: 1985 TLGVEDLSLLSGEELHSRKAYLIIFNGLMLGIHRQPKRFAHFLRILRRAGKIGEFVSVFV 1806
LGVEDL LLSGEELH+ ++L+I NGL+LG HR+P+ FA +R LRRAGK+GEFVSVFV
Sbjct: 529 CLGVEDLELLSGEELHTPNSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFV 588
Query: 1805 NDKQRCVYVASDGGRVCRPLVIADNGISRIKEHHMKELRDGFRTFDDFLREGLVEYLDVN 1626
N+KQRCVY+ASDGGRVCRPLVIAD G+SRIKEHHMKEL DG RTFDDFLR+GL+EYLDVN
Sbjct: 589 NEKQRCVYIASDGGRVCRPLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVN 648
Query: 1625 EENNALIALYESEATESTSHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGN 1446
EENNALIALYE EAT T+HIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGN
Sbjct: 649 EENNALIALYEGEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGN 708
Query: 1445 IAYNQLCRMDTLLYLLVYPQRPLLTTKTIELVKYDKLGAGQNATVAVMSYSGYDIEDAIV 1266
IAYNQLCRMDTLLYLLVYPQRPLLTT+TIELV YDKLGAGQNATVAVMSYSGYDIEDAIV
Sbjct: 709 IAYNQLCRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIV 768
Query: 1265 MNKASLDRGFGRCIVMKKYSAVLKKHPNRTQDRIIGPTSSSGRVDTRCQALDNDGIAAPG 1086
MNK+SLDRGFGRCIVMK+YSAV +K+ DRI+ P +G R Q LD+DGIA PG
Sbjct: 769 MNKSSLDRGFGRCIVMKRYSAVNQKYETGASDRILRP-QRTGPGSERMQILDDDGIATPG 827
Query: 1085 EIIRNHDIYINKQTPTKTREEVKNPMALPDSEYKFTPQTYKAP--EPSVVDKVVLTSNEE 912
EIIR +DIYINK++ TR + +LPDS Y+ QTYK P E VVD+V L ++
Sbjct: 828 EIIRPNDIYINKESSIHTRGSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRN 887
Query: 911 DALNIKFLFRQTRRPELGDKFSSRHGQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPS 732
L+IKFL R TRRPE+GDKFSSRHGQKGVCG I+QQEDFPFSERGICPDLIMNPHGFPS
Sbjct: 888 SNLSIKFLIRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPS 947
Query: 731 RMTIGKMIELLGGKAGVCCGKFHYGSAFGEPSGHADKVETICATLVKHGFCYSGKDLIYS 552
RMT+GKMIELLGGKAGV CG+FHYGSAFGEPSGHAD+VE I TL+KHGF Y+GKD IYS
Sbjct: 948 RMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYS 1007
Query: 551 GITGYPLQAYIFMGPIYYQKLKHMVVDKMHARASGPRMMLTRQPTEGRSRDGGLRLGEME 372
GITG PLQAYIFMGPIYYQKLKHMV+DKMHAR +GPR+MLTRQPTEGR+R+GGLR+GEME
Sbjct: 1008 GITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEME 1067
Query: 371 RDCLIAYGASMMILERLMISSDQFEIQVCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMK 192
RDCLIAYGASM+I ERLMISSD FE+QVC KCGLLGYY+HKLK G CS+CK+G+ ++TMK
Sbjct: 1068 RDCLIAYGASMLIFERLMISSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMK 1127
Query: 191 LPYACKLLFQELQSMNIVPRLQLAEA 114
LPYACKLL QELQSMNIVPRL+L+EA
Sbjct: 1128 LPYACKLLIQELQSMNIVPRLKLSEA 1153
>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis]
gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase
III subunit, putative [Ricinus communis]
Length = 1139
Score = 1596 bits (4132), Expect = 0.0
Identities = 801/1138 (70%), Positives = 933/1138 (81%), Gaps = 4/1138 (0%)
Frame = -2
Query: 3515 NERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISEN 3336
+++ L AP+K+AVDKFQLLP FLKVRGLVKQH+DSFN+FVN IKKI+ +AN++++S
Sbjct: 23 DKQKLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNIGIKKIV--RANDRIVSTV 80
Query: 3335 NPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGN-EIVVRK 3159
+P YL++ D+R+ P D + + +PH CRL D TYAAPI V+VEY G+ + R
Sbjct: 81 DPGIYLRFKDVRIGTPSDIMDGVSEQLSPHMCRLSDKTYAAPILVNVEYIYGSHDQKTRV 140
Query: 3158 GKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSK 2979
K + IGR+PIMLRS C+L GK E ELA+LGECPLDPGGYFV+KGTEKVILIQEQLSK
Sbjct: 141 EKNDVVIGRMPIMLRSRSCVLYGKDEAELARLGECPLDPGGYFVIKGTEKVILIQEQLSK 200
Query: 2978 NRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIE 2799
NRI+IDTD KG T KSKTII ++ E YL LN F + +PI++V+KAMG+E
Sbjct: 201 NRIIIDTDKKGNINASVTSSTEATKSKTIIQMEKEKMYLCLNQFVKKIPIMVVIKAMGME 260
Query: 2798 SDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKV 2619
SDQE VQMVGRDPR+ +L PS++ CA IYT++ ALEYL K
Sbjct: 261 SDQEVVQMVGRDPRYSALLLPSIEECAGLSIYTQQKALEYLD---------------GKE 305
Query: 2618 DEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELA 2439
+ A IL +VFLANVPVHK +FRPKC+YVAVMLRRM+EAMLN +A+DDKDYVGNKRLEL+
Sbjct: 306 NRALTILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKDAMDDKDYVGNKRLELS 365
Query: 2438 GVLIALLFEDLFKRMNQEIKSHVDKTFSKQ-RSTMFDVAKAIPPHIISYGLEHAISSGNW 2262
G LI+LLFEDLFK M E++ +D +KQ RS+ FD+A+ I I+ GLE +S+GN+
Sbjct: 366 GQLISLLFEDLFKTMITEVQRTIDTVLTKQNRSSRFDLAQYIVRDNITNGLERTLSTGNF 425
Query: 2261 NVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPCDT 2082
+VKRFKM RKG+TQV+ RLSYIASLG MTR+ QFEK+RKVSGPRALQ SQWGMLCPCDT
Sbjct: 426 DVKRFKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 485
Query: 2081 PEGEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFNGL 1902
PEGEACGLVKNLALMTHVTTD+EE PLI+LC+ LGVEDL LLSGEELH+ ++L+IFNGL
Sbjct: 486 PEGEACGLVKNLALMTHVTTDDEEGPLISLCYCLGVEDLELLSGEELHTPNSFLVIFNGL 545
Query: 1901 MLGIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNGIS 1722
+LG HR+P+ F + +R LRRAGKIGEFVSVFVN+KQR VY+ASDGGRVCRPLVIAD G+S
Sbjct: 546 ILGKHRRPQYFVNSMRKLRRAGKIGEFVSVFVNEKQRAVYLASDGGRVCRPLVIADRGVS 605
Query: 1721 RIKEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSHIEIEPFTI 1542
RIKEHHMKELRDG RTFDDFLR+GL+EYLDVNEENNAL+ALYE EAT T+HIEIEPFTI
Sbjct: 606 RIKEHHMKELRDGVRTFDDFLRDGLIEYLDVNEENNALVALYEGEATPETTHIEIEPFTI 665
Query: 1541 LGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTKT 1362
LGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+LLYLLVYPQRPLLTT+T
Sbjct: 666 LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRMDSLLYLLVYPQRPLLTTRT 725
Query: 1361 IELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKHPN 1182
IELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKY A+ +K+ N
Sbjct: 726 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYPAIRQKYEN 785
Query: 1181 RTQDRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNPMAL 1002
DRI+ P R R + LD DG+AAPGEII+ DIY+ K+ P T VK+ AL
Sbjct: 786 GASDRILRP----DRTVERERVLDYDGLAAPGEIIKPSDIYVKKECPIDTMGPVKSSAAL 841
Query: 1001 PDSEYKFTPQTYKAP--EPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRHGQK 828
+ +Y+ +P +YK P E V+D+V L+S+ + L IK + R TRRPE+GDKFSSRHGQK
Sbjct: 842 ENIKYRPSPLSYKGPEGESPVIDRVALSSDRNNNLCIKVMIRHTRRPEVGDKFSSRHGQK 901
Query: 827 GVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYGSAF 648
GVCG I+QQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGV CG+FHYGSAF
Sbjct: 902 GVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAF 961
Query: 647 GEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMVVDK 468
GEPSGHAD VE I TLV GF Y+GKD+IYSGITG PLQAYIFMGPIYYQKLKHMV+DK
Sbjct: 962 GEPSGHADTVEAISETLVNRGFSYNGKDIIYSGITGCPLQAYIFMGPIYYQKLKHMVLDK 1021
Query: 467 MHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFEIQV 288
MHAR +GPR+MLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I ERLMISSD FE+QV
Sbjct: 1022 MHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQV 1081
Query: 287 CTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAEA 114
C CGLLGY+N KL+ G CSTCK+G+ I+TMKLPYACKLL QELQSMNIVPRL+LAEA
Sbjct: 1082 CRVCGLLGYFNQKLRAGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1139
>ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like isoform
X1 [Glycine max]
Length = 1165
Score = 1593 bits (4125), Expect = 0.0
Identities = 794/1139 (69%), Positives = 938/1139 (82%), Gaps = 5/1139 (0%)
Frame = -2
Query: 3515 NERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISEN 3336
++R L AP+K+AVDKFQLLP FLKVRGLVKQH+DSFN+FV +IKKI+ +AN+ +++
Sbjct: 32 DQRVLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTDIKKIV--RANDLIVASR 89
Query: 3335 NPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVR-K 3159
P+ YL++L++ + +P + D + + TP CRL D+TYAAPI DVEYT G+ K
Sbjct: 90 YPHIYLRFLNVGIGKPSIMIDEVTEDLTPQTCRLSDLTYAAPICADVEYTLGSHDKPDIK 149
Query: 3158 GKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSK 2979
K + IGR+PIMLRSC C+L G+ E ELAKLGECPLDPGGYFV+KGTEKVILIQEQLSK
Sbjct: 150 RKLKVEIGRMPIMLRSCCCVLHGRDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQLSK 209
Query: 2978 NRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIE 2799
NRI+IDTD KG T + K+KT+++++ E +L+LN F + VP+++V+KAMG+E
Sbjct: 210 NRIIIDTDKKGNITASVTSSTEKIKTKTVVVMEKEKLWLQLNKFPKKVPLMVVMKAMGME 269
Query: 2798 SDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKV 2619
SDQE QMVGRDPR+ +L PS++ C +YT+E ALEYL VK + N +E K
Sbjct: 270 SDQEVTQMVGRDPRYSFLLLPSIEECTKCKVYTREQALEYLDKLVKRPTYSNNAAE--KE 327
Query: 2618 DEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELA 2439
A L +VFLANVPV + +FRPKCIYVAVM+RR+++A+LN +A+DDKDYVGNKRLEL+
Sbjct: 328 GAAFSALRDVFLANVPVDQDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLELS 387
Query: 2438 GVLIALLFEDLFKRMNQEIKSHVDKTFSK-QRSTMFDVAKAIPP--HIISYGLEHAISSG 2268
G LI+LLFEDLFK M E+K+ DK K ++ FD+ + II+ GLE +S+G
Sbjct: 388 GQLISLLFEDLFKSMTTEVKNLTDKMLEKPDKAKNFDICTLLTRTRSIITLGLERTLSTG 447
Query: 2267 NWNVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPC 2088
N+ +KRF+M+RKG+TQV+ RLS+I +LGHMTR+ QFEK+RKVSGPRALQ SQWGMLCPC
Sbjct: 448 NFEIKRFRMERKGMTQVLQRLSFIGALGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPC 507
Query: 2087 DTPEGEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFN 1908
DTPEGE+CGLVKNLALMTHVTTDEEE PLI+LC +LGVED+ LS EELH+ ++L+IFN
Sbjct: 508 DTPEGESCGLVKNLALMTHVTTDEEEKPLISLCESLGVEDMKDLSAEELHTPDSFLVIFN 567
Query: 1907 GLMLGIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNG 1728
GL+LG HR+P FA +R LRRAGKIGEFVSV+VN+KQ CVY+ASDGGRVCRPLVIAD G
Sbjct: 568 GLILGKHRRPLHFATAIRKLRRAGKIGEFVSVYVNEKQHCVYLASDGGRVCRPLVIADKG 627
Query: 1727 ISRIKEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSHIEIEPF 1548
ISRIK+HHMKEL DG RTFDDFLR+GL+EYLDVNEENNALIALYE +AT T+HIEIEPF
Sbjct: 628 ISRIKQHHMKELMDGVRTFDDFLRDGLLEYLDVNEENNALIALYEGDATSETTHIEIEPF 687
Query: 1547 TILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTT 1368
TILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+LLYLLVYPQRPLLTT
Sbjct: 688 TILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQRPLLTT 747
Query: 1367 KTIELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKH 1188
KTIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKY+A+++KH
Sbjct: 748 KTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYNAIIQKH 807
Query: 1187 PNRTQDRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNPM 1008
N T DRI+ P ++ R Q LD+DGIAAPGEI+R +DIYINKQ+P TR
Sbjct: 808 SNDTSDRILRPNRTADTAG-RMQILDDDGIAAPGEILRPYDIYINKQSPIDTRTPKTGSA 866
Query: 1007 A-LPDSEYKFTPQTYKAPEPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRHGQ 831
A LPDS Y+ Q++K VVD+VVL S++++ + IKFL R TRRPELGDKFSSRHGQ
Sbjct: 867 ANLPDSAYRSNAQSFKGNGGEVVDRVVLCSDKDNNMCIKFLIRHTRRPELGDKFSSRHGQ 926
Query: 830 KGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYGSA 651
KGVCG IV QEDFPFSE+GICPDLIMNPHGFPSRMT+GKMIELLGGKAGV CG+FHYGSA
Sbjct: 927 KGVCGTIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSA 986
Query: 650 FGEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMVVD 471
FGE SGHADKVETI TLV GF YSGKD IYSGITG PLQAYIFMGPIYYQKLKHMV+D
Sbjct: 987 FGERSGHADKVETISETLVSKGFNYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLD 1046
Query: 470 KMHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFEIQ 291
KMHAR SGPR+MLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I ERLM+SSD FE+Q
Sbjct: 1047 KMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEVQ 1106
Query: 290 VCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAEA 114
VCT CGLLGYYNHKLK G CS+CK+G+ I+TMKLPYACKL+ QELQSMNIVPRL+LA+A
Sbjct: 1107 VCTACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQSMNIVPRLKLADA 1165
>gb|ESW24958.1| hypothetical protein PHAVU_004G175000g [Phaseolus vulgaris]
Length = 1161
Score = 1593 bits (4125), Expect = 0.0
Identities = 794/1139 (69%), Positives = 938/1139 (82%), Gaps = 5/1139 (0%)
Frame = -2
Query: 3515 NERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISEN 3336
++R L AP+K+AVDKFQLLP FLKVRGLVKQH+DSFN+FV EIKKI+ +AN + +
Sbjct: 28 DQRILTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIV--RANNLISATR 85
Query: 3335 NPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKG 3156
+P+ YL++L++++ +PC+ ++ + + TP CRL D TYAAPI VDVEYT G+ R
Sbjct: 86 HPHIYLRFLNVKIRKPCIMDESVTDDVTPQTCRLSDQTYAAPICVDVEYTHGSRDDPRLH 145
Query: 3155 KGA-ITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSK 2979
K + IGR+PIMLRSC C+L G+ + ELAKLGECPLDPGGYFVVKGTEKVILIQEQLSK
Sbjct: 146 KRLNVEIGRMPIMLRSCCCVLYGRDQAELAKLGECPLDPGGYFVVKGTEKVILIQEQLSK 205
Query: 2978 NRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIE 2799
NRI+IDTD KG T + K+KTII++++E +L LN F + VP++ V+KAMGIE
Sbjct: 206 NRIIIDTDKKGNIAASVTSSTEKIKTKTIIVMENEKLWLHLNQFPKKVPLMAVMKAMGIE 265
Query: 2798 SDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKV 2619
SDQE QMVGRDPR+ +L PS + C +YT+E ALEYL VK + + +E K
Sbjct: 266 SDQEVTQMVGRDPRYSFLLLPSFEECRKCNVYTQEQALEYLDKMVKRSMYSSNSAE--KE 323
Query: 2618 DEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELA 2439
A +L +VFLANVPV +FRPKCIYVAVM+RR+++A+LN +A+DDKDYVGNKRLEL+
Sbjct: 324 GRAFSVLRDVFLANVPVDGDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLELS 383
Query: 2438 GVLIALLFEDLFKRMNQEIKSHVDKTFSK-QRSTMFDVAKAI--PPHIISYGLEHAISSG 2268
G LI+LLFEDLFK M E+K+ DK K ++ FD++ + +II+ GLE +S+G
Sbjct: 384 GQLISLLFEDLFKSMATEVKNLTDKMLDKPDKARNFDISTLLNRTQNIITLGLERTLSTG 443
Query: 2267 NWNVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPC 2088
N+ +KRF+M+RKG+TQV+ RLS+I ++GHMTR+ QFEK+RKVSGPRALQ SQWGMLCPC
Sbjct: 444 NFEIKRFRMERKGMTQVLQRLSFIGAMGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPC 503
Query: 2087 DTPEGEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFN 1908
DTPEGE+CGLVKNLALMTHVTTDEEE+PLI++C++LGVEDL LLS EELH+ ++L+I N
Sbjct: 504 DTPEGESCGLVKNLALMTHVTTDEEESPLISMCYSLGVEDLELLSAEELHTPDSFLVILN 563
Query: 1907 GLMLGIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNG 1728
GL+LG H++P RFA +R LRR GKIGEFVSVFV++KQ CVY+ASDGGRVCRPLVIAD G
Sbjct: 564 GLILGKHKRPLRFATAIRKLRRRGKIGEFVSVFVHEKQNCVYLASDGGRVCRPLVIADKG 623
Query: 1727 ISRIKEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSHIEIEPF 1548
ISRIK+HHMKEL DG RTFDDFLR+GL+EYLDVNEENN LIALYE +AT T+HIEIEPF
Sbjct: 624 ISRIKQHHMKELMDGVRTFDDFLRDGLLEYLDVNEENNTLIALYEGDATSETTHIEIEPF 683
Query: 1547 TILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTT 1368
TILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+LLYLLVYPQRPLLTT
Sbjct: 684 TILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQRPLLTT 743
Query: 1367 KTIELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKH 1188
KTIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAV++KH
Sbjct: 744 KTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVIQKH 803
Query: 1187 PNRTQDRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNPM 1008
N T DRI+ P ++ R + LD+DGIAAPGEI++ DIYINKQ+P TR
Sbjct: 804 SNDTSDRILRPNRAADTAG-RMRILDDDGIAAPGEILKPFDIYINKQSPIDTRTPRTGAA 862
Query: 1007 A-LPDSEYKFTPQTYKAPEPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRHGQ 831
LPDS Y+ Q++K VVD+VVL S+++ + IKFL R TRRPELGDKFSSRHGQ
Sbjct: 863 GNLPDSAYRSNSQSFKGHGGEVVDRVVLCSDKDKNMCIKFLIRHTRRPELGDKFSSRHGQ 922
Query: 830 KGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYGSA 651
KGVCG IVQQEDFPFSE+GICPDLIMNPHGFPSRMT+GKMIELLGGKAGV CG+FHYGSA
Sbjct: 923 KGVCGTIVQQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSA 982
Query: 650 FGEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMVVD 471
FGE SGHADKVE I TLV GF YSGKD IYSGITG PLQAYIFMGPIYYQKLKHMV+D
Sbjct: 983 FGERSGHADKVEAISETLVSKGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLD 1042
Query: 470 KMHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFEIQ 291
KMHAR SGPR+MLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I ERLM+SSD FE+Q
Sbjct: 1043 KMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEVQ 1102
Query: 290 VCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAEA 114
VCT CGLLGYYNHKLK G CS CK+G++I+TMKLPYACKL+ QELQSMNIVPRL+LA+A
Sbjct: 1103 VCTACGLLGYYNHKLKTGICSYCKNGDKISTMKLPYACKLMIQELQSMNIVPRLKLADA 1161
>ref|NP_001050323.1| Os03g0403100 [Oryza sativa Japonica Group]
gi|108708688|gb|ABF96483.1| DNA-directed RNA polymerase
III 130 kDa polypeptide, putative, expressed [Oryza
sativa Japonica Group] gi|113548794|dbj|BAF12237.1|
Os03g0403100 [Oryza sativa Japonica Group]
Length = 1155
Score = 1575 bits (4079), Expect = 0.0
Identities = 782/1140 (68%), Positives = 927/1140 (81%), Gaps = 9/1140 (0%)
Frame = -2
Query: 3509 RNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNP 3330
R+LAAPV VDKF LLPAFLKVRGLVK+HIDSFN+F+ I+ I+ KAN ++ + NNP
Sbjct: 25 RSLAAPVTKPVDKFALLPAFLKVRGLVKEHIDSFNYFITKGIRNIV--KANNRIEARNNP 82
Query: 3329 NFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKGKG 3150
+ +L+Y +RV P ++ + + TPH CRL D TY+AP+ D+EYT G + +++ K
Sbjct: 83 SIFLRYNSVRVGVPSVQVQYIAEKITPHFCRLTDRTYSAPVLADIEYTVGKQYELKR-KP 141
Query: 3149 AITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRI 2970
IG LPIMLRS C+L GK E ELA+ GECPLDPGGYF+VKGTEKVILIQEQLSKNRI
Sbjct: 142 NFIIGYLPIMLRSHACVLNGKDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRI 201
Query: 2969 LIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESDQ 2790
+IDTDSKG THE KSKT+I ++ E YL+LN FT+ +PI++V+KAMG+ESDQ
Sbjct: 202 IIDTDSKGRVIASVTSSTHEIKSKTVIFMEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQ 261
Query: 2789 EFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKVDEA 2610
E QMVGRDPR+G +L PS+Q CA IYT++ AL+Y+ KV GN+K RSK
Sbjct: 262 EVAQMVGRDPRYGDLLYPSIQECAFERIYTQKQALQYMDDKVMYPGAGNQKEGRSK---- 317
Query: 2609 RDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELAGVL 2430
IL +VF+A+VPV +FRPKCIY AVMLRRM++A+LN + DDKDYVGNKRLEL+G L
Sbjct: 318 -SILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQL 376
Query: 2429 IALLFEDLFKRMNQEIKSHVDKTFSKQRSTMFDVAKAIPPHIISYGLEHAISSGNWNVKR 2250
I+LLFEDLFK MN ++KT K S+ D++ I +II++GLE AIS+GNW++KR
Sbjct: 377 ISLLFEDLFKTMNSNAVELMNKTSEKIHSSPLDLSLHIKENIITHGLERAISTGNWDIKR 436
Query: 2249 FKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPCDTPEGE 2070
F+M RKGV+QV+SRLSY+ASLG+MTRI QFEKTRK SGPRALQ SQWGMLCPCDTPEGE
Sbjct: 437 FRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGE 496
Query: 2069 ACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFNGLMLGI 1890
ACGL KNLAL+THVTTD+EE PL+ LC++LGVEDLSLLSGEE+H+ ++L++FNGL+LG
Sbjct: 497 ACGLTKNLALLTHVTTDQEEGPLMNLCYSLGVEDLSLLSGEEIHASGSFLVMFNGLILGK 556
Query: 1889 HRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNGISRIKE 1710
HRQP+RFA+ +R LRR+G IGEFVS+FVN+KQ C+++ASDGGRVCRPL+IAD GI R+KE
Sbjct: 557 HRQPQRFANAMRKLRRSGIIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGIPRVKE 616
Query: 1709 HHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATE-----STSHIEIEPFT 1545
HHMK+LRDG R+FDDFLR+GL+EYLDVNEENNALIALYE E + S +HIEIEP T
Sbjct: 617 HHMKQLRDGIRSFDDFLRDGLIEYLDVNEENNALIALYEHEDQDDVQRSSITHIEIEPLT 676
Query: 1544 ILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTK 1365
ILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL R D+LLYLLVY QRPLLTTK
Sbjct: 677 ILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLLYLLVYAQRPLLTTK 736
Query: 1364 TIELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKHP 1185
TIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCI MKKY+ +K+
Sbjct: 737 TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAMKKYTVTKEKYE 796
Query: 1184 NRTQDRIIGP--TSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNP 1011
DRI+ P + +ALD DG AAPG IIRNHDIY+NKQTP T+ + +
Sbjct: 797 GGYSDRIVKPQRDKDGALLKQNMRALDEDGFAAPGLIIRNHDIYVNKQTPRNTKRD--SG 854
Query: 1010 MALPDSEYKFTPQTYKA--PEPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRH 837
L D +YK +P YK E +VVD+V+L S+ ++ L IK + R TRRPE+GDKFSSRH
Sbjct: 855 AHLTDRDYKDSPAVYKGVDGETTVVDRVMLCSDTDEKLIIKCIIRHTRRPEVGDKFSSRH 914
Query: 836 GQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYG 657
GQKGVCG IVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGV CG+FHYG
Sbjct: 915 GQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGQFHYG 974
Query: 656 SAFGEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMV 477
SAFGEPSG+ADKVE I TLVKHGF Y+GKDL+YSGI G+P QAY+FMGPIYYQKLKHMV
Sbjct: 975 SAFGEPSGNADKVEDISRTLVKHGFSYNGKDLLYSGILGHPCQAYVFMGPIYYQKLKHMV 1034
Query: 476 VDKMHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFE 297
+DKMHARASGPR++LTRQPTEGRSRDGGLRLGEMERDCLIAYGASM+I ERL+ISSD ++
Sbjct: 1035 LDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLISSDPYQ 1094
Query: 296 IQVCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAE 117
+QVC KCGLLGYYNHKLK +CS CK+GE +A M++PYACKLLFQELQ+MN+VPRL+L E
Sbjct: 1095 VQVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMNVVPRLKLTE 1154
>gb|AAP03366.1| putative RNA polymerase III [Oryza sativa Japonica Group]
Length = 1174
Score = 1575 bits (4079), Expect = 0.0
Identities = 782/1140 (68%), Positives = 927/1140 (81%), Gaps = 9/1140 (0%)
Frame = -2
Query: 3509 RNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNP 3330
R+LAAPV VDKF LLPAFLKVRGLVK+HIDSFN+F+ I+ I+ KAN ++ + NNP
Sbjct: 44 RSLAAPVTKPVDKFALLPAFLKVRGLVKEHIDSFNYFITKGIRNIV--KANNRIEARNNP 101
Query: 3329 NFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKGKG 3150
+ +L+Y +RV P ++ + + TPH CRL D TY+AP+ D+EYT G + +++ K
Sbjct: 102 SIFLRYNSVRVGVPSVQVQYIAEKITPHFCRLTDRTYSAPVLADIEYTVGKQYELKR-KP 160
Query: 3149 AITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRI 2970
IG LPIMLRS C+L GK E ELA+ GECPLDPGGYF+VKGTEKVILIQEQLSKNRI
Sbjct: 161 NFIIGYLPIMLRSHACVLNGKDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRI 220
Query: 2969 LIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESDQ 2790
+IDTDSKG THE KSKT+I ++ E YL+LN FT+ +PI++V+KAMG+ESDQ
Sbjct: 221 IIDTDSKGRVIASVTSSTHEIKSKTVIFMEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQ 280
Query: 2789 EFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKVDEA 2610
E QMVGRDPR+G +L PS+Q CA IYT++ AL+Y+ KV GN+K RSK
Sbjct: 281 EVAQMVGRDPRYGDLLYPSIQECAFERIYTQKQALQYMDDKVMYPGAGNQKEGRSK---- 336
Query: 2609 RDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELAGVL 2430
IL +VF+A+VPV +FRPKCIY AVMLRRM++A+LN + DDKDYVGNKRLEL+G L
Sbjct: 337 -SILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQL 395
Query: 2429 IALLFEDLFKRMNQEIKSHVDKTFSKQRSTMFDVAKAIPPHIISYGLEHAISSGNWNVKR 2250
I+LLFEDLFK MN ++KT K S+ D++ I +II++GLE AIS+GNW++KR
Sbjct: 396 ISLLFEDLFKTMNSNAVELMNKTSEKIHSSPLDLSLHIKENIITHGLERAISTGNWDIKR 455
Query: 2249 FKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPCDTPEGE 2070
F+M RKGV+QV+SRLSY+ASLG+MTRI QFEKTRK SGPRALQ SQWGMLCPCDTPEGE
Sbjct: 456 FRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGE 515
Query: 2069 ACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFNGLMLGI 1890
ACGL KNLAL+THVTTD+EE PL+ LC++LGVEDLSLLSGEE+H+ ++L++FNGL+LG
Sbjct: 516 ACGLTKNLALLTHVTTDQEEGPLMNLCYSLGVEDLSLLSGEEIHASGSFLVMFNGLILGK 575
Query: 1889 HRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNGISRIKE 1710
HRQP+RFA+ +R LRR+G IGEFVS+FVN+KQ C+++ASDGGRVCRPL+IAD GI R+KE
Sbjct: 576 HRQPQRFANAMRKLRRSGIIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGIPRVKE 635
Query: 1709 HHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATE-----STSHIEIEPFT 1545
HHMK+LRDG R+FDDFLR+GL+EYLDVNEENNALIALYE E + S +HIEIEP T
Sbjct: 636 HHMKQLRDGIRSFDDFLRDGLIEYLDVNEENNALIALYEHEDQDDVQRSSITHIEIEPLT 695
Query: 1544 ILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTK 1365
ILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL R D+LLYLLVY QRPLLTTK
Sbjct: 696 ILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLLYLLVYAQRPLLTTK 755
Query: 1364 TIELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKHP 1185
TIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCI MKKY+ +K+
Sbjct: 756 TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAMKKYTVTKEKYE 815
Query: 1184 NRTQDRIIGP--TSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNP 1011
DRI+ P + +ALD DG AAPG IIRNHDIY+NKQTP T+ + +
Sbjct: 816 GGYSDRIVKPQRDKDGALLKQNMRALDEDGFAAPGLIIRNHDIYVNKQTPRNTKRD--SG 873
Query: 1010 MALPDSEYKFTPQTYKA--PEPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRH 837
L D +YK +P YK E +VVD+V+L S+ ++ L IK + R TRRPE+GDKFSSRH
Sbjct: 874 AHLTDRDYKDSPAVYKGVDGETTVVDRVMLCSDTDEKLIIKCIIRHTRRPEVGDKFSSRH 933
Query: 836 GQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYG 657
GQKGVCG IVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGV CG+FHYG
Sbjct: 934 GQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGQFHYG 993
Query: 656 SAFGEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMV 477
SAFGEPSG+ADKVE I TLVKHGF Y+GKDL+YSGI G+P QAY+FMGPIYYQKLKHMV
Sbjct: 994 SAFGEPSGNADKVEDISRTLVKHGFSYNGKDLLYSGILGHPCQAYVFMGPIYYQKLKHMV 1053
Query: 476 VDKMHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFE 297
+DKMHARASGPR++LTRQPTEGRSRDGGLRLGEMERDCLIAYGASM+I ERL+ISSD ++
Sbjct: 1054 LDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLISSDPYQ 1113
Query: 296 IQVCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAE 117
+QVC KCGLLGYYNHKLK +CS CK+GE +A M++PYACKLLFQELQ+MN+VPRL+L E
Sbjct: 1114 VQVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMNVVPRLKLTE 1173
>ref|XP_006656544.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Oryza
brachyantha]
Length = 1164
Score = 1572 bits (4070), Expect = 0.0
Identities = 778/1140 (68%), Positives = 928/1140 (81%), Gaps = 9/1140 (0%)
Frame = -2
Query: 3509 RNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNP 3330
R+LAAPV VDKF LLPAFLKVRGLVK+HIDSFN+F+ IK I+ KAN ++ + NNP
Sbjct: 33 RSLAAPVSNPVDKFALLPAFLKVRGLVKEHIDSFNYFITKGIKNIV--KANNRIEARNNP 90
Query: 3329 NFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKGKG 3150
+ +L+Y+++RV P ++ + + + TPH CRL D TY+AP+ D+EYT G + +++ K
Sbjct: 91 SIFLRYVNVRVGVPSVQVEYIAEKITPHFCRLTDRTYSAPVLADIEYTVGKQYELKR-KP 149
Query: 3149 AITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRI 2970
IG LPIMLRS C+L G+ E ELA+ GECPLDPGGYF+VKGTEKVILIQEQLSKNRI
Sbjct: 150 QFIIGYLPIMLRSYACVLNGRDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRI 209
Query: 2969 LIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESDQ 2790
+IDTDSK THE KSKT+I ++ E YL+LN FT+ +PI++V+KAMG+ESDQ
Sbjct: 210 IIDTDSKRRVIASVTSSTHEIKSKTVIFMEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQ 269
Query: 2789 EFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKVDEA 2610
E VQMVGRDPR+G +L PS+Q CA IYT++ AL+Y+ KV GN+K RSK
Sbjct: 270 EVVQMVGRDPRYGDLLYPSIQECAFERIYTQKQALQYMDDKVMYPGTGNQKEGRSK---- 325
Query: 2609 RDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELAGVL 2430
IL +VF+A+VPV+ +FRPKCIY AVMLRRM++A+LN + DDKDYVGNKRLEL+G L
Sbjct: 326 -SILRDVFVAHVPVNSGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQL 384
Query: 2429 IALLFEDLFKRMNQEIKSHVDKTFSKQRSTMFDVAKAIPPHIISYGLEHAISSGNWNVKR 2250
I+LLFEDLFK MN +++T + S+ D++ I +II++GLE AIS+GNW++KR
Sbjct: 385 ISLLFEDLFKTMNSNAVELMNRTSERIHSSPLDLSLHIKENIITHGLERAISTGNWDIKR 444
Query: 2249 FKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPCDTPEGE 2070
F+M RKGV+QV+SRLSY+ASLG+MTRI QFEKTRK SGPRALQ SQWGMLCPCDTPEGE
Sbjct: 445 FRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGE 504
Query: 2069 ACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFNGLMLGI 1890
ACGL KNLAL+THVTTD+EE PL+ LC++LGVEDLSLLSGEE+H+ +YL++FNGL+LG
Sbjct: 505 ACGLTKNLALLTHVTTDQEEGPLMNLCYSLGVEDLSLLSGEEIHAPGSYLVMFNGLILGK 564
Query: 1889 HRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNGISRIKE 1710
HRQP+RFA+ +R LRR+G IGEFVS+FVN+KQ C+++ASDGGRVCRPL+IAD GISR+KE
Sbjct: 565 HRQPQRFANAMRKLRRSGIIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGISRVKE 624
Query: 1709 HHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATE-----STSHIEIEPFT 1545
HHMKELRDG R+FDDFLR+GL+EYLDVNEENNALIALYE E + S +HIEIEP T
Sbjct: 625 HHMKELRDGIRSFDDFLRDGLIEYLDVNEENNALIALYEHEDQDNVQRSSITHIEIEPLT 684
Query: 1544 ILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTK 1365
ILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGN+AYNQL R D+LLYLLVY QRPLLTTK
Sbjct: 685 ILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNVAYNQLFRADSLLYLLVYAQRPLLTTK 744
Query: 1364 TIELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKHP 1185
TIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCI MKKY+ +K+
Sbjct: 745 TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAMKKYTVTKEKYE 804
Query: 1184 NRTQDRIIGP--TSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNP 1011
DRI+ P + +ALD DG AAPG IIRNHDIY+NKQTP T+ +
Sbjct: 805 GGYSDRIVKPQRDKDGSLLKQNMRALDEDGFAAPGLIIRNHDIYVNKQTPKSTKRD-SGG 863
Query: 1010 MALPDSEYKFTPQTYKA--PEPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRH 837
L D +YK +P YK E +VVD+V+L S+ ++ L IK + R TRRPE+GDKFSSRH
Sbjct: 864 AQLTDRDYKDSPAVYKGVDGETTVVDRVMLCSDTDEKLIIKCIIRHTRRPEVGDKFSSRH 923
Query: 836 GQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYG 657
GQKGVCG IVQQEDFPFSERG+CPDLIMNPHGFPSRMTIGKMIELLGGKAG+ CG+FHYG
Sbjct: 924 GQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSRMTIGKMIELLGGKAGLSCGQFHYG 983
Query: 656 SAFGEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMV 477
SAFGE SG ADKVE I TL+KHGF Y+GKDL+YSGI G P Q+YIFMGPIYYQKLKHMV
Sbjct: 984 SAFGESSGTADKVEDISLTLIKHGFSYNGKDLLYSGILGNPCQSYIFMGPIYYQKLKHMV 1043
Query: 476 VDKMHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFE 297
+DKMHARASGPR++LTRQPTEGRSRDGGLRLGEMERDCLIAYGASM+I ERL+ISSD ++
Sbjct: 1044 LDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLISSDPYQ 1103
Query: 296 IQVCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAE 117
+QVC KCGLLGYYNHKLK +CS CK+GE +A M++PYACKLLFQELQ+MN+VPRL+L E
Sbjct: 1104 VQVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMNVVPRLKLTE 1163
>ref|XP_004510587.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cicer
arietinum]
Length = 1134
Score = 1571 bits (4068), Expect = 0.0
Identities = 790/1134 (69%), Positives = 928/1134 (81%), Gaps = 4/1134 (0%)
Frame = -2
Query: 3503 LAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNF 3324
L P K AVDKFQLLP FLK RGLVKQH+DSFN+FVN +IKKI+ +AN V S P+
Sbjct: 6 LIDPQKPAVDKFQLLPEFLKYRGLVKQHLDSFNYFVNTDIKKIV--RANNLVQSSRYPHI 63
Query: 3323 YLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGN-EIVVRKGKGA 3147
YL++LD+R+ +P D +P CRL D TYAAPI V VEYT+G+ + V++ K
Sbjct: 64 YLRFLDVRIGKPERIFDGSSEYVSPQTCRLSDQTYAAPILVSVEYTQGSPDNVIKIPKNK 123
Query: 3146 ITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIL 2967
+ IGR+PIMLRSC C+L + E ELAKLGECPLDPGGYFV+KGTEKVILIQEQLSKNRI+
Sbjct: 124 VVIGRMPIMLRSCCCVLYNRDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQLSKNRII 183
Query: 2966 IDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESDQE 2787
IDTD K T + K+KT I+++ E +L+LN F VP++IV+KAMG+ESD E
Sbjct: 184 IDTDKKKNITASVTSSTEKVKTKTTILMEREKMWLELNQFQTKVPLMIVMKAMGMESDHE 243
Query: 2786 FVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKVDEAR 2607
VQM+GRDPR+G +L PS++ C G+ T+ AL YL +K K F + E K A
Sbjct: 244 VVQMIGRDPRYGLLLLPSIEECNKSGVSTQAQALAYLDSKAKRSMFSTMQPE--KEGRAF 301
Query: 2606 DILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELAGVLI 2427
IL +VFLANVPVH+ +FRPKCIYVAVM+RR+++A+LN +A+DDKDYVGNKRLEL+G LI
Sbjct: 302 SILRDVFLANVPVHEDNFRPKCIYVAVMMRRILDAILNKDAMDDKDYVGNKRLELSGQLI 361
Query: 2426 ALLFEDLFKRMNQEIKSHVDKTFSK-QRSTMFDVAKAIPPHIISYGLEHAISSGNWNVKR 2250
+LLFEDLFK M E+++ DK K R+ FD + IS GLE +S+GN+++KR
Sbjct: 362 SLLFEDLFKTMTTELQTLTDKYLEKPDRAKKFDFTTLLNRDYISPGLERYLSTGNFDIKR 421
Query: 2249 FKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPCDTPEGE 2070
FKM R G+TQV+ RLS+I++LG MTR++ QFEK++KVSGPRALQ SQWGMLCPCDTPEGE
Sbjct: 422 FKMHRSGMTQVLQRLSFISALGQMTRVKPQFEKSKKVSGPRALQPSQWGMLCPCDTPEGE 481
Query: 2069 ACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFNGLMLGI 1890
ACGLVKNLALMTHVTTD++EAPLI+LC+ LGVED+ LSGEELH+ +YL+IFNGL+LG
Sbjct: 482 ACGLVKNLALMTHVTTDDDEAPLISLCYILGVEDIEHLSGEELHTPNSYLVIFNGLILGK 541
Query: 1889 HRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNGISRIKE 1710
HR+P+RFA +R LRRAG IGEFVSV++N+KQ CVY+ASDGGRVCRPLVIAD GISR+K
Sbjct: 542 HRRPQRFATAMRNLRRAGVIGEFVSVYLNEKQCCVYLASDGGRVCRPLVIADKGISRVKA 601
Query: 1709 HHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSHIEIEPFTILGVC 1530
HHMKEL+DG TF+ FLR GL+EYLDVNEENNALIALYE +AT T+HIEIEPFTILGVC
Sbjct: 602 HHMKELKDGVTTFNHFLRNGLIEYLDVNEENNALIALYEGDATPKTTHIEIEPFTILGVC 661
Query: 1529 AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTKTIELV 1350
AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTLLYLLVYPQRPLLTTK+IELV
Sbjct: 662 AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVYPQRPLLTTKSIELV 721
Query: 1349 KYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKHPNRTQD 1170
YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMK+Y A+ +K+ N T+D
Sbjct: 722 GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYVAIRQKYSNGTED 781
Query: 1169 RIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNPMA-LPDS 993
RII P ++ R Q LD+DGIAAPGEIIR +D+YINKQ+P +TR A LPD+
Sbjct: 782 RIIRPNRAADTTG-RMQILDDDGIAAPGEIIRPNDMYINKQSPIETRATTTGSTAKLPDN 840
Query: 992 EYKFTPQTY-KAPEPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRHGQKGVCG 816
Y+ TPQT+ K VVD+VVL ++++ L IKFL R TRRPELGDKFSSRHGQKGVCG
Sbjct: 841 AYRSTPQTFNKCHGGEVVDRVVLCNDKDTNLCIKFLTRHTRRPELGDKFSSRHGQKGVCG 900
Query: 815 NIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYGSAFGEPS 636
QEDFPFSE+GICPDLIMNPHGFPSRMT+GKMIELLGGKAGV CG+FHYGSAFGE S
Sbjct: 901 XXXXQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGERS 960
Query: 635 GHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMVVDKMHAR 456
GHADKVETI TLVKHGF Y+GKD IYSGITG PLQAYIFMGPIYYQKLKHMV+DKMHAR
Sbjct: 961 GHADKVETISETLVKHGFNYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 1020
Query: 455 ASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFEIQVCTKC 276
+GPR ++TRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I ERLMISSD FE+QVC KC
Sbjct: 1021 GNGPRALMTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQVCRKC 1080
Query: 275 GLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAEA 114
GLLGYYNHKLK G CS+CK+GE+I+T+KLPYACKLL QELQSMNIVPRL+LA+A
Sbjct: 1081 GLLGYYNHKLKTGICSSCKNGEQISTVKLPYACKLLMQELQSMNIVPRLKLADA 1134
>ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like isoform
X1 [Glycine max]
Length = 1166
Score = 1568 bits (4060), Expect = 0.0
Identities = 785/1139 (68%), Positives = 932/1139 (81%), Gaps = 5/1139 (0%)
Frame = -2
Query: 3515 NERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISEN 3336
++R L AP+K+AVDKFQL+P FLKVRGLVKQH+DSFN+FV +IKKI+ +AN +++
Sbjct: 33 DQRVLTAPIKSAVDKFQLIPEFLKVRGLVKQHLDSFNYFVRTDIKKIV--RANNLIMASR 90
Query: 3335 NPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYT-RGNEIVVRK 3159
P+ YL++L++ + +P + D + TP CRL D+TYAAPI DVEYT R ++ K
Sbjct: 91 YPHIYLRFLNVGIGKPSMMIDEVTEGLTPQTCRLSDLTYAAPICADVEYTLRSHDKPDNK 150
Query: 3158 GKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSK 2979
+ IGR+PIMLRSC C+L GK E ELAKLGECPLDPGGYFV+KGTEKVILIQEQLSK
Sbjct: 151 RTLRVEIGRMPIMLRSCCCVLHGKDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQLSK 210
Query: 2978 NRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIE 2799
NRI+IDTD KG T + K+KT+I++++E +L+LN F + VP+++V+KAMG+E
Sbjct: 211 NRIIIDTDKKGNITASVTSSTEKIKTKTVIVMENEKLWLQLNKFPKKVPLMVVMKAMGME 270
Query: 2798 SDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKV 2619
SDQE +QMVGRDPR+ +L PS++ C +YTKE ALEYL VK + + +E K
Sbjct: 271 SDQEVIQMVGRDPRYSFLLLPSIEECRKCKVYTKEQALEYLDKLVKRPTYSSNSAE--KE 328
Query: 2618 DEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELA 2439
A L +VFLANVPV + +F+ KCIYVAVM+RR+++A+LN +A+DDKDYVGNKRLEL+
Sbjct: 329 GAAFSALRDVFLANVPVDQDNFQKKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLELS 388
Query: 2438 GVLIALLFEDLFKRMNQEIKSHVDKTFSK-QRSTMFDVAKAIPP--HIISYGLEHAISSG 2268
G LI+LLFEDLFK M E+K+ DK K ++ FD+ + II+ GLE +S+G
Sbjct: 389 GQLISLLFEDLFKSMTTEVKNLTDKMLDKPDKAKNFDICTLLTRTRSIITLGLERTLSTG 448
Query: 2267 NWNVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPC 2088
N+ +KRF+M+RKG+TQV+ RLS+I +LGHMTR+ QFEK+RKVSGPRALQ SQWGMLCPC
Sbjct: 449 NFEIKRFRMERKGMTQVLQRLSFIGALGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPC 508
Query: 2087 DTPEGEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFN 1908
DTPEGE+CGLVKNLALMTHVTTDEEE PLI+L ++L V + L EELH+ ++L+IFN
Sbjct: 509 DTPEGESCGLVKNLALMTHVTTDEEEKPLISLFYSLDVARIEHLFAEELHTPDSFLVIFN 568
Query: 1907 GLMLGIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNG 1728
GL+LG HR+P FA +R LRRAG+IGEFVSV+VN+KQ CVY+ASDGGRVCRPLVIAD G
Sbjct: 569 GLILGKHRRPLHFATRIRKLRRAGEIGEFVSVYVNEKQHCVYLASDGGRVCRPLVIADKG 628
Query: 1727 ISRIKEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSHIEIEPF 1548
ISRIK+HHMKEL DG TFDDFLR+GL+EYLDVNEENNALIALYE +AT T+HIEIEPF
Sbjct: 629 ISRIKQHHMKELMDGVCTFDDFLRDGLLEYLDVNEENNALIALYEGDATSETTHIEIEPF 688
Query: 1547 TILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTT 1368
TILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+LLYLLVYPQRPLLTT
Sbjct: 689 TILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQRPLLTT 748
Query: 1367 KTIELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKH 1188
KTIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKY+A+++KH
Sbjct: 749 KTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYNAIIQKH 808
Query: 1187 PNRTQDRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNPM 1008
N T DRI+ P ++ R Q LD+DGIAAPGEI+R +DIYINKQ+P TR
Sbjct: 809 SNDTSDRILRPNRTADTAG-RMQILDDDGIAAPGEILRPYDIYINKQSPIDTRTPKTGSA 867
Query: 1007 A-LPDSEYKFTPQTYKAPEPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRHGQ 831
A LPDS Y+ Q++K VVD+VVL S++++ + IKFL R TRRPELGDKFSSRHGQ
Sbjct: 868 ANLPDSAYRSNAQSFKGNGGEVVDRVVLCSDKDNNMCIKFLIRHTRRPELGDKFSSRHGQ 927
Query: 830 KGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYGSA 651
KGVCG IV QEDFPFSE+GICPDLIMNPHGFPSRMT+GKMIELLGGKAGV CG+FHYGSA
Sbjct: 928 KGVCGTIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSA 987
Query: 650 FGEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMVVD 471
FGE SGHADKVETI TLV GF YSGKD IYSGITG PLQAYIFMGPIYYQKLKHMV+D
Sbjct: 988 FGERSGHADKVETISETLVSKGFNYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLD 1047
Query: 470 KMHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFEIQ 291
KMHAR SGPR+MLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I ERLM+SSD FE+Q
Sbjct: 1048 KMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEVQ 1107
Query: 290 VCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAEA 114
VCT CGLLGYYNHKLK G CS+CK+G+ I+TMKLPYACKL+ QELQSMNIVPRL+LA+A
Sbjct: 1108 VCTACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQSMNIVPRLKLADA 1166
>ref|XP_004951189.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like isoform
X1 [Setaria italica]
Length = 1154
Score = 1568 bits (4059), Expect = 0.0
Identities = 784/1150 (68%), Positives = 927/1150 (80%), Gaps = 9/1150 (0%)
Frame = -2
Query: 3539 EDDEVDYENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKA 3360
+D +V + R+LAAPV VDKF LLPAFLKVRGLVK+HIDSFN+F+ I+ II +A
Sbjct: 13 KDKDVPPPSYRSLAAPVANPVDKFALLPAFLKVRGLVKEHIDSFNYFITRGIRNII--QA 70
Query: 3359 NEKVISENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRG 3180
N ++ + N+PN YL+Y ++ V P ++ D E TPH CRL D TY+APIKVD+EYT G
Sbjct: 71 NNRIEARNDPNIYLRYTNVHVGTPSVQVDYKVEEITPHFCRLTDRTYSAPIKVDIEYTVG 130
Query: 3179 NEIVVRKGKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVIL 3000
+ ++ K + IG +PIMLRS CIL GK E ELA+LGECPLDPGGYF+VKGTEKVIL
Sbjct: 131 KQHELQF-KRNVLIGYMPIMLRSYACILHGKDEAELARLGECPLDPGGYFIVKGTEKVIL 189
Query: 2999 IQEQLSKNRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIV 2820
IQEQLSKNRI+IDTDSKG THE KSKT+I + E YL+LN FT+ +PI++V
Sbjct: 190 IQEQLSKNRIIIDTDSKGRVIASVTSSTHEIKSKTVITLDKEKIYLQLNQFTKPIPIIVV 249
Query: 2819 VKAMGIESDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNE 2640
+KAMG+ESDQE VQMVGRDPR+G +L PS+Q CAS IYT++ AL+Y+ KV GN+
Sbjct: 250 MKAMGMESDQEVVQMVGRDPRYGDLLFPSIQECASERIYTQQQALQYMDEKVTYPGAGNQ 309
Query: 2639 KSERSKVDEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVG 2460
K RSK IL +VF+A+VPV +FR KCIY VMLRRM++A+LN DDKDYVG
Sbjct: 310 KEGRSK-----SILRDVFIAHVPVKNGNFRQKCIYTGVMLRRMMDAILNANTFDDKDYVG 364
Query: 2459 NKRLELAGVLIALLFEDLFKRMNQEIKSHVDKTFSKQRSTMFDVAKAIPPHIISYGLEHA 2280
NKRLEL+G LI+LLFEDLFK MN + ++K K RS+ D ++ I I+ GLE A
Sbjct: 365 NKRLELSGQLISLLFEDLFKTMNSQAVELMNKNSDKTRSSPSDFSQLIKHESITSGLERA 424
Query: 2279 ISSGNWNVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGM 2100
IS+GNW++KRF+M RKGV+QV+SRLSY+ASLG+MTRI QFEKTRK SGPRALQ SQWGM
Sbjct: 425 ISTGNWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGM 484
Query: 2099 LCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYL 1920
LCPCDTPEGEACGL KNLAL+THVTTD+EE PL+ LC +LGVEDLSLLSGEE+H+ ++L
Sbjct: 485 LCPCDTPEGEACGLTKNLALLTHVTTDQEEGPLMNLCKSLGVEDLSLLSGEEIHAPGSFL 544
Query: 1919 IIFNGLMLGIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVI 1740
++FNGL+LG HRQP+ FA+ +R LRR+GKIGEFVS+FVN+KQ C+++ASDGGRVCRPL+I
Sbjct: 545 VMFNGLILGKHRQPQTFANAMRNLRRSGKIGEFVSIFVNEKQHCIHIASDGGRVCRPLII 604
Query: 1739 ADNGISRIKEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYE-----SEATES 1575
AD GISR+KEHHMKELRDG R+FDDFLR+GL+EYLDVNEENNALIALYE S
Sbjct: 605 ADKGISRVKEHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNALIALYEHVDQDDVERSS 664
Query: 1574 TSHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLV 1395
+HIEIEP +ILGV +GLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL R D+LLYLLV
Sbjct: 665 ITHIEIEPLSILGVVSGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLLYLLV 724
Query: 1394 YPQRPLLTTKTIELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMK 1215
Y QRPLLTTKTIELV YDKLGAGQNATVAVM YSGYDIEDAIVMNK+SLDRGFGRCI MK
Sbjct: 725 YAQRPLLTTKTIELVGYDKLGAGQNATVAVMGYSGYDIEDAIVMNKSSLDRGFGRCIAMK 784
Query: 1214 KYSAVLKKHPNRTQDRIIGP--TSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTP 1041
KY+ + + + DRI P V +ALD DGIAAPG+IIRNHD+Y+NKQ+P
Sbjct: 785 KYTVIKEYYGEGVSDRIAKPQRDKDGALVKQNMRALDEDGIAAPGQIIRNHDVYVNKQSP 844
Query: 1040 TKTREEVKNPMALPDSEYKFTPQTYKA--PEPSVVDKVVLTSNEEDALNIKFLFRQTRRP 867
K + L D +YK +P YK E +VVD+V+L S+ + L+IK + R TRRP
Sbjct: 845 -KVIDRRGAGAPLMDRDYKDSPAIYKGVDGETTVVDRVMLCSDTNEKLSIKCIIRHTRRP 903
Query: 866 ELGDKFSSRHGQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKA 687
E+GDKFSSRHGQKGVCG IVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIEL+GGKA
Sbjct: 904 EVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELIGGKA 963
Query: 686 GVCCGKFHYGSAFGEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGP 507
GV CG+FHYGSAFGEPSG+ADKVE I TL+KHGF Y+GKD +YSGI G+PL+AYIFMGP
Sbjct: 964 GVSCGRFHYGSAFGEPSGNADKVEDISNTLIKHGFSYNGKDFLYSGILGHPLEAYIFMGP 1023
Query: 506 IYYQKLKHMVVDKMHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILE 327
IYYQKLKHMV+DKMHARASGPR++LTRQPTEGRSRDGGLRLGEMERDCLIAYGASM+I E
Sbjct: 1024 IYYQKLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFE 1083
Query: 326 RLMISSDQFEIQVCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSM 147
RL++SSD +++QVC KCGLLGYYN+KLK +CS CK+GE +A M+LPYACKLLFQELQSM
Sbjct: 1084 RLLLSSDPYQVQVCRKCGLLGYYNYKLKTSYCSMCKNGENMAKMRLPYACKLLFQELQSM 1143
Query: 146 NIVPRLQLAE 117
N+VPRL+L E
Sbjct: 1144 NVVPRLKLTE 1153