BLASTX nr result

ID: Ephedra27_contig00015616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00015616
         (3702 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001755844.1| predicted protein [Physcomitrella patens] gi...  1755   0.0  
ref|XP_002977127.1| hypothetical protein SELMODRAFT_443461 [Sela...  1730   0.0  
ref|XP_002992124.1| hypothetical protein SELMODRAFT_430375 [Sela...  1721   0.0  
ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s...  1643   0.0  
ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr...  1642   0.0  
ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...  1642   0.0  
gb|EOY19609.1| DNA-directed RNA polymerase isoform 1 [Theobroma ...  1623   0.0  
ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III s...  1617   0.0  
ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III s...  1616   0.0  
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...  1612   0.0  
gb|EOY19611.1| DNA-directed RNA polymerase isoform 3 [Theobroma ...  1608   0.0  
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...  1596   0.0  
ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III s...  1593   0.0  
gb|ESW24958.1| hypothetical protein PHAVU_004G175000g [Phaseolus...  1593   0.0  
ref|NP_001050323.1| Os03g0403100 [Oryza sativa Japonica Group] g...  1575   0.0  
gb|AAP03366.1| putative RNA polymerase III [Oryza sativa Japonic...  1575   0.0  
ref|XP_006656544.1| PREDICTED: DNA-directed RNA polymerase III s...  1572   0.0  
ref|XP_004510587.1| PREDICTED: DNA-directed RNA polymerase III s...  1571   0.0  
ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III s...  1568   0.0  
ref|XP_004951189.1| PREDICTED: DNA-directed RNA polymerase III s...  1568   0.0  

>ref|XP_001755844.1| predicted protein [Physcomitrella patens] gi|162693163|gb|EDQ79517.1|
            predicted protein [Physcomitrella patens]
          Length = 1135

 Score = 1755 bits (4546), Expect = 0.0
 Identities = 885/1145 (77%), Positives = 981/1145 (85%), Gaps = 9/1145 (0%)
 Frame = -2

Query: 3521 YENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVIS 3342
            + ++  L APVKTAVDKFQLLP+FLKVRGLVKQHIDSFN+F+N EIKKIIHA+ NEKV S
Sbjct: 9    HSHKEGLEAPVKTAVDKFQLLPSFLKVRGLVKQHIDSFNYFINCEIKKIIHAQGNEKVTS 68

Query: 3341 ENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVR 3162
            + + NFYLKYLDI V  PC+E+D ++   TP QCRLRDMTY+API VDVEYTRG E+V  
Sbjct: 69   DVDANFYLKYLDIFVGEPCVEQDYIYEPITPQQCRLRDMTYSAPISVDVEYTRGKEVV-- 126

Query: 3161 KGKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLS 2982
               G+I IGR+PIMLRS +CIL GK+E +LAK+GECPLDPGGYFVVKGTEKVILIQEQLS
Sbjct: 127  ---GSINIGRMPIMLRSSRCILAGKNEAQLAKVGECPLDPGGYFVVKGTEKVILIQEQLS 183

Query: 2981 KNRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGI 2802
            KNRI+I TDS G         THE+KSKT ++VKHE  YL+ NTF +D+PIV+V++AMG+
Sbjct: 184  KNRIIITTDSSGSVAASVTSSTHERKSKTNMVVKHERIYLRHNTFGDDIPIVVVMRAMGM 243

Query: 2801 ESDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSK 2622
            ESDQE VQMVGRDP++ GIL PSLQ CA+  IYT   ALEYLG+KV+             
Sbjct: 244  ESDQEIVQMVGRDPKYAGILNPSLQECAALKIYTSHQALEYLGSKVR------------- 290

Query: 2621 VDEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLEL 2442
            VDEARDIL  V LA+VPVH+FDFR KCIY+AV++R+M+EAMLN EAVDD DYVGNKRLEL
Sbjct: 291  VDEARDILATVVLAHVPVHQFDFRAKCIYLAVIIRKMLEAMLNREAVDDMDYVGNKRLEL 350

Query: 2441 AGVLIALLFEDLFKRMNQEIKSHVDKTFSK-QRSTMFDVAKAIPPHIISYGLEHAISSGN 2265
            AG L++LLFEDLFKRMN E+K  +D T SK  RST FD+ K I P  ++ GLEHAISSGN
Sbjct: 351  AGQLLSLLFEDLFKRMNAELKKSMDATLSKANRSTQFDIIKLIRPDTLTNGLEHAISSGN 410

Query: 2264 WNVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPCD 2085
            W VKRFKMDRKGVTQVVSRLS+IA+LGHMTRI SQFEKTRKVSGPRALQ SQWGMLCPCD
Sbjct: 411  WAVKRFKMDRKGVTQVVSRLSFIAALGHMTRISSQFEKTRKVSGPRALQPSQWGMLCPCD 470

Query: 2084 TPEGEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFNG 1905
            TPEGEACGLVKNL+LMTHVTTDEEEAPLI LC TLGVEDLSLLSGEELHS K YL+ FNG
Sbjct: 471  TPEGEACGLVKNLSLMTHVTTDEEEAPLIELCTTLGVEDLSLLSGEELHSPKTYLVFFNG 530

Query: 1904 LMLGIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDK-QRCVYVASDGGRVCRPLVIADNG 1728
             +LG+HR+P RFA  LR LRRAGKIGEFVSV VN K QR + +ASDGGRVCRPLVIAD G
Sbjct: 531  TILGVHRRPNRFAEVLRKLRRAGKIGEFVSVHVNPKHQRNIQIASDGGRVCRPLVIADKG 590

Query: 1727 ISRIKEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSHIEIEPF 1548
            +SR+KEHHMKEL+DGFRTFDDFLREGLVEYLDVNEENN+LIALYE +AT  T+HIEIEPF
Sbjct: 591  VSRVKEHHMKELKDGFRTFDDFLREGLVEYLDVNEENNSLIALYEGDATPDTTHIEIEPF 650

Query: 1547 TILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTT 1368
            TILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTLLYLLVYPQRPLL+T
Sbjct: 651  TILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLQRMDTLLYLLVYPQRPLLST 710

Query: 1367 KTIELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKH 1188
            K+IELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV+KK    +KK+
Sbjct: 711  KSIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVIKKSVVPMKKY 770

Query: 1187 PNRTQDRIIGPTSSSG-----RVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREE 1023
             NRT DRI+ P   S      +V  R Q  D+DGIAA GE+IR  DIY+NKQ+P  TR  
Sbjct: 771  ANRTADRIMAPELQSSAKGGVQVVARQQLQDHDGIAAVGEMIRPGDIYVNKQSPIDTRNN 830

Query: 1022 VKNPMALPDSEYKFTPQTYK--APEPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKF 849
            V NPMALPDS YK TPQTYK  A E +VVDKV+LTSN+E+   +K L RQTRRPE+GDKF
Sbjct: 831  VNNPMALPDSAYKRTPQTYKGAAGETAVVDKVLLTSNDENHFVVKCLIRQTRRPEVGDKF 890

Query: 848  SSRHGQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGK 669
            SSRHGQKGVCG IVQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAG+  GK
Sbjct: 891  SSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGLHNGK 950

Query: 668  FHYGSAFGEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKL 489
            FHYGSAFGEPSGHADKV TI ATLVKHGF YSGKD IYSGITG PLQAYIFMGPIYYQKL
Sbjct: 951  FHYGSAFGEPSGHADKVSTISATLVKHGFSYSGKDFIYSGITGSPLQAYIFMGPIYYQKL 1010

Query: 488  KHMVVDKMHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISS 309
            KHMV+DKMHARA GPR++LTRQPTEGRSR+GGLRLGEMERDCLIAYGASMMILERLMISS
Sbjct: 1011 KHMVLDKMHARARGPRVVLTRQPTEGRSREGGLRLGEMERDCLIAYGASMMILERLMISS 1070

Query: 308  DQFEIQVCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRL 129
            DQF+IQVCTKCG++GYY+HKLK+  CSTCKSG+ IATMKLPYACKLLFQELQSMNIVPRL
Sbjct: 1071 DQFQIQVCTKCGMIGYYHHKLKICLCSTCKSGDNIATMKLPYACKLLFQELQSMNIVPRL 1130

Query: 128  QLAEA 114
             LAEA
Sbjct: 1131 TLAEA 1135


>ref|XP_002977127.1| hypothetical protein SELMODRAFT_443461 [Selaginella moellendorffii]
            gi|300155103|gb|EFJ21736.1| hypothetical protein
            SELMODRAFT_443461 [Selaginella moellendorffii]
          Length = 1386

 Score = 1730 bits (4480), Expect = 0.0
 Identities = 862/1195 (72%), Positives = 995/1195 (83%), Gaps = 26/1195 (2%)
 Frame = -2

Query: 3620 VFLYNEVGKYKIF----VRHNNCWQKSF-STMEDDEVDYENERNLAAPVKTAVDKFQLLP 3456
            + LY E  + KI       H N  +KSF     D  +   +   L APVKTAVDKFQLLP
Sbjct: 206  ICLYKEEEEEKITNPSPQHHKNTMRKSFFQEPRDYLLTRRSYAGLDAPVKTAVDKFQLLP 265

Query: 3455 AFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNFYLKY------------ 3312
            AF KVRGLVKQH+DS+N+FVN EIKKIIHAK NEK+ S+ +PNFY+KY            
Sbjct: 266  AFHKVRGLVKQHLDSYNYFVNCEIKKIIHAKGNEKITSDVDPNFYIKYACDTFQYFTNIL 325

Query: 3311 ---LDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKGK---G 3150
               LDI V  P +E+D +  + TP QCRLRDMTY+API VD+EYTRG +I+ RKGK   G
Sbjct: 326  FRFLDIFVGTPSIEQDYIRQDITPQQCRLRDMTYSAPISVDIEYTRGKDIITRKGKDGQG 385

Query: 3149 AITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRI 2970
            A  IGR+P+MLRS +CILTGKS+ ELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRI
Sbjct: 386  AQVIGRMPVMLRSSRCILTGKSDAELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRI 445

Query: 2969 LIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESDQ 2790
            +ID+DS G         THE+KSKT II+KHE  Y+KLN F++DVPIV+V+KAMG+ESDQ
Sbjct: 446  IIDSDSTGSVTASVTSSTHERKSKTNIIIKHEKIYVKLNVFSDDVPIVVVMKAMGMESDQ 505

Query: 2789 EFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKVDEA 2610
            E +QMVG DP+F GILAPS+Q CAS G+YT   ALEYLGTKV+  R    K  +SKVDEA
Sbjct: 506  EIIQMVGTDPKFAGILAPSMQECASLGVYTTHQALEYLGTKVRVNRQWGSKQTKSKVDEA 565

Query: 2609 RDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELAGVL 2430
            RDIL NVFLA+V VH++DFRPKCIYVA+MLRRM+EA+L+ E VDD+DYVGNKRLELAG L
Sbjct: 566  RDILLNVFLAHVAVHRYDFRPKCIYVALMLRRMLEAILDKECVDDRDYVGNKRLELAGQL 625

Query: 2429 IALLFEDLFKRMNQEIKSHVDKTFSKQ-RSTMFDVAKAIPPHIISYGLEHAISSGNWNVK 2253
            +ALLFEDLFKR   E+KS+VD+T SK  R++ +DV+K++ P +++ GLE+AISSGNW VK
Sbjct: 626  LALLFEDLFKRSCSELKSNVDRTLSKMNRASQYDVSKSLKPDMLTSGLENAISSGNWTVK 685

Query: 2252 RFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPCDTPEG 2073
            RF+MD+KGVTQVVSRLSYIA+LGHMTR+ SQFEK+RK           WGMLCPCDTPEG
Sbjct: 686  RFRMDKKGVTQVVSRLSYIAALGHMTRVASQFEKSRK-----------WGMLCPCDTPEG 734

Query: 2072 EACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFNGLMLG 1893
            E CGL KNLALMTH+TTD+EEAPLI LC  LGVED++LLSGEE HS+ A+L++FNG +LG
Sbjct: 735  EGCGLTKNLALMTHITTDDEEAPLIDLCTNLGVEDINLLSGEEFHSKNAFLVMFNGTILG 794

Query: 1892 IHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNGISRIK 1713
            IHR+P++FA  +R LRRAGKIGEFVS+FVN+KQRC+Y+ASDGGRVCRP+VIAD+G+SRIK
Sbjct: 795  IHRRPQQFATLMRKLRRAGKIGEFVSIFVNEKQRCIYIASDGGRVCRPVVIADHGVSRIK 854

Query: 1712 EHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSHIEIEPFTILGV 1533
            EHHMKEL+DGFRTFDDFLREGLVEYLDVNEENNALIALYE EA  +T+HIEIEPFTILGV
Sbjct: 855  EHHMKELKDGFRTFDDFLREGLVEYLDVNEENNALIALYEKEADSTTTHIEIEPFTILGV 914

Query: 1532 CAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTKTIEL 1353
            CAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL R+DTLLYLLVYPQRPLLTTK+IEL
Sbjct: 915  CAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLQRIDTLLYLLVYPQRPLLTTKSIEL 974

Query: 1352 VKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKHPNRTQ 1173
            V YDKLGAGQNA+VAVMSYSGYDIEDAIVMNKASLDRGFGRCIV+KK+S +++K+ NRT 
Sbjct: 975  VNYDKLGAGQNASVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVLKKFSCLVRKYENRTM 1034

Query: 1172 DRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNPMALPDS 993
            DRI+ P           Q LD DGIA+ GE I + DI++NK++P   +    NP+ALPDS
Sbjct: 1035 DRIVAPRQHG---HATSQLLDQDGIASVGERIYDKDIFVNKESPKDVKTTFLNPLALPDS 1091

Query: 992  EYKFTPQTYKAP--EPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRHGQKGVC 819
             Y+ TPQ YK P  E ++VDKV+LT+NE   + IK   R TRRPELGDKFSSRHGQKGVC
Sbjct: 1092 AYRPTPQRYKGPLGESAIVDKVLLTTNESQQMVIKCQVRHTRRPELGDKFSSRHGQKGVC 1151

Query: 818  GNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYGSAFGEP 639
            G IV+Q+DFPF+ERG+CPDLIMNPHGFPSRMT+GKMIELLGGKAGV  GK+HYGSAFGEP
Sbjct: 1152 GTIVEQQDFPFTERGVCPDLIMNPHGFPSRMTVGKMIELLGGKAGVQSGKYHYGSAFGEP 1211

Query: 638  SGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMVVDKMHA 459
            SGHAD VE I ATLVKHGF Y GKDLIYSGITG PLQAYI+MGPIYYQKLKHMV+DKMHA
Sbjct: 1212 SGHADTVEAISATLVKHGFSYCGKDLIYSGITGCPLQAYIYMGPIYYQKLKHMVLDKMHA 1271

Query: 458  RASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFEIQVCTK 279
            RA GPR++LTRQPTEGRSR+GGLRLGEMERDCL+AYG+SM+ILERLMISSDQF++QVCT 
Sbjct: 1272 RAQGPRVVLTRQPTEGRSREGGLRLGEMERDCLVAYGSSMLILERLMISSDQFQVQVCTN 1331

Query: 278  CGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAEA 114
            CGLLGYY+HKLKM FCS CK+GE +A MKLPYACKLLFQELQSMNIVPRLQLAEA
Sbjct: 1332 CGLLGYYSHKLKMNFCSYCKNGENMAAMKLPYACKLLFQELQSMNIVPRLQLAEA 1386


>ref|XP_002992124.1| hypothetical protein SELMODRAFT_430375 [Selaginella moellendorffii]
            gi|300140050|gb|EFJ06779.1| hypothetical protein
            SELMODRAFT_430375 [Selaginella moellendorffii]
          Length = 1440

 Score = 1721 bits (4456), Expect = 0.0
 Identities = 860/1196 (71%), Positives = 993/1196 (83%), Gaps = 27/1196 (2%)
 Frame = -2

Query: 3620 VFLYNEVGKYKIF----VRHNNCWQKSF-STMEDDEVDYENERNLAAPVKTAVDKFQLLP 3456
            + LY E  + KI       H N  +KSF     D  +   +   L APVKTAVDKFQLLP
Sbjct: 266  ICLYKEEEEEKITNPSPQHHKNTMRKSFFQEPRDYLLTRRSYAGLDAPVKTAVDKFQLLP 325

Query: 3455 AFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNFYLKY------------ 3312
            AF KVRGLVKQH+DS+N+FVN EIKKIIHAK NEK+ S+ +PNFY+KY            
Sbjct: 326  AFHKVRGLVKQHLDSYNYFVNCEIKKIIHAKGNEKITSDVDPNFYIKYACDTFFQYFTNI 385

Query: 3311 ----LDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKGK--- 3153
                LDI V  P +E+D +  + TP QCRLRDMTY+API VD+EYTRG +I+ RKGK   
Sbjct: 386  LFRFLDIFVGTPSIEQDYIRQDITPQQCRLRDMTYSAPISVDIEYTRGKDIITRKGKDGQ 445

Query: 3152 GAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNR 2973
            GA  IGR+P+MLRS +CILTGKS+ ELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNR
Sbjct: 446  GAQVIGRMPVMLRSSRCILTGKSDAELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNR 505

Query: 2972 ILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESD 2793
            I+ID+DS G                ++ +  H     KLN F++DVPIV+V+KAMG+ESD
Sbjct: 506  IIIDSDSTG----------------SLSLAVH--MRGKLNVFSDDVPIVVVMKAMGMESD 547

Query: 2792 QEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKVDE 2613
            QE +QMVG DP+F GILAPS+Q CAS G+YT   ALEYLGTKV+  R    K  +SKVDE
Sbjct: 548  QEIIQMVGTDPKFAGILAPSMQECASLGVYTTHQALEYLGTKVRVNRQWGSKQTKSKVDE 607

Query: 2612 ARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELAGV 2433
            ARDIL NVFLA+V VHK+DFRPKCIYVA+MLRRM+EA+L+ E VDD+DYVGNKRLELAG 
Sbjct: 608  ARDILLNVFLAHVAVHKYDFRPKCIYVALMLRRMLEAILDKECVDDRDYVGNKRLELAGQ 667

Query: 2432 LIALLFEDLFKRMNQEIKSHVDKTFSKQ-RSTMFDVAKAIPPHIISYGLEHAISSGNWNV 2256
            L+ALLFEDLFKR   E+KS+VD+T SK  R++ +DV+K++ P +++ GLE+AISSGNW V
Sbjct: 668  LLALLFEDLFKRSCSELKSNVDRTLSKMNRASQYDVSKSLKPDMLTSGLENAISSGNWTV 727

Query: 2255 KRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPCDTPE 2076
            KRF+MD+KGVTQVVSRLSYIA+LGHMTR+ SQFEK+RKVSGPR+LQ SQWGMLCPCDTPE
Sbjct: 728  KRFRMDKKGVTQVVSRLSYIAALGHMTRVASQFEKSRKVSGPRSLQPSQWGMLCPCDTPE 787

Query: 2075 GEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFNGLML 1896
            GE CGL KNLALMTH+TTD+EEAPLI LC  LGVED++LLSGEE HS+ A+L++FNG +L
Sbjct: 788  GEGCGLTKNLALMTHITTDDEEAPLIDLCTNLGVEDINLLSGEEFHSKNAFLVMFNGTIL 847

Query: 1895 GIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNGISRI 1716
            GIHR+P++FA  +R LRRAGKIGEFVS+FVN+KQRC+Y+ASDGGRVCRP+VIAD+G+SRI
Sbjct: 848  GIHRRPQQFATLMRKLRRAGKIGEFVSIFVNEKQRCIYIASDGGRVCRPVVIADHGVSRI 907

Query: 1715 KEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSHIEIEPFTILG 1536
            KEHHMKEL+DGFRTFDDFLREGLVEYLDVNEENNALIALYE EA  +T+HIEIEPFTILG
Sbjct: 908  KEHHMKELKDGFRTFDDFLREGLVEYLDVNEENNALIALYEKEADSTTTHIEIEPFTILG 967

Query: 1535 VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTKTIE 1356
            VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL R+DTLLYLLVYPQRPLLTTK+IE
Sbjct: 968  VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLQRIDTLLYLLVYPQRPLLTTKSIE 1027

Query: 1355 LVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKHPNRT 1176
            LV YDKLGAGQNA+VAVMSYSGYDIEDAIVMNKASLDRGFGRCIV+KK+S +++K+ NRT
Sbjct: 1028 LVNYDKLGAGQNASVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVLKKFSCLVRKYENRT 1087

Query: 1175 QDRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNPMALPD 996
             DRI+ P           Q LD DGIA+ GE I + DI++NK++P   +    NP+ALPD
Sbjct: 1088 MDRIVAPRQHG---HATSQLLDQDGIASVGERIYDKDIFVNKESPKDVKTTFLNPLALPD 1144

Query: 995  SEYKFTPQTYKAP--EPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRHGQKGV 822
            S Y+ TPQ YK P  E ++VDKV+LT+NE   + IK   R TRRPELGDKFSSRHGQKGV
Sbjct: 1145 SAYRPTPQRYKGPLGESAIVDKVLLTTNESQQMVIKCQVRHTRRPELGDKFSSRHGQKGV 1204

Query: 821  CGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYGSAFGE 642
            CG IV+Q+DFPF+ERG+CPDLIMNPHGFPSRMT+GKMIELLGGKAGV  GK+HYGSAFGE
Sbjct: 1205 CGTIVEQQDFPFTERGVCPDLIMNPHGFPSRMTVGKMIELLGGKAGVQSGKYHYGSAFGE 1264

Query: 641  PSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMVVDKMH 462
            PSGHAD VE I ATLVKHGF Y GKDLIYSGITG PLQAYI+MGPIYYQKLKHMV+DKMH
Sbjct: 1265 PSGHADTVEAISATLVKHGFSYCGKDLIYSGITGCPLQAYIYMGPIYYQKLKHMVLDKMH 1324

Query: 461  ARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFEIQVCT 282
            ARA GPR++LTRQPTEGRSR+GGLRLGEMERDCL+AYG+SM+ILERLMISSDQF++QVCT
Sbjct: 1325 ARAQGPRVVLTRQPTEGRSREGGLRLGEMERDCLVAYGSSMLILERLMISSDQFQVQVCT 1384

Query: 281  KCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAEA 114
             CGLLGYY+HKLKM FCS CK+GE +A MKLPYACKLLFQELQSMNIVPRLQLAEA
Sbjct: 1385 NCGLLGYYSHKLKMNFCSYCKNGENMAAMKLPYACKLLFQELQSMNIVPRLQLAEA 1440


>ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Citrus sinensis] gi|568883651|ref|XP_006494573.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Citrus sinensis]
          Length = 1149

 Score = 1643 bits (4255), Expect = 0.0
 Identities = 813/1138 (71%), Positives = 952/1138 (83%), Gaps = 4/1138 (0%)
 Frame = -2

Query: 3515 NERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISEN 3336
            +++ LAAPVK+ VDKFQLLP FLKVRGLVKQH+DSFN+FVN  I+KI+  +AN++++S  
Sbjct: 17   DKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIV--RANDRIVSGI 74

Query: 3335 NPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIV-VRK 3159
            +P+ +L++ D+R+ +P +  D +  +  PH CRL DMTYAAPI V++EY +G+       
Sbjct: 75   DPSIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTM 134

Query: 3158 GKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSK 2979
             K  + IGR+PIMLRSC+C+L GK E ELA+LGECPLDPGGYF++KGTEKV+LIQEQLSK
Sbjct: 135  EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 194

Query: 2978 NRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIE 2799
            NR++IDTD KG         T   KSKT+I ++    YL LN F + +PI++V+KAMGIE
Sbjct: 195  NRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGIE 254

Query: 2798 SDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKV 2619
            SDQE VQMVGRDPR+  +L PS++ CA+  IYT+E ALEYL  KVK   FG+  ++R   
Sbjct: 255  SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDRE-- 312

Query: 2618 DEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELA 2439
              A  IL +VFLANVPVH  +FRPKC YVAVMLRRM+EAMLN +A+DDKDYVGNKRLEL+
Sbjct: 313  GRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELS 372

Query: 2438 GVLIALLFEDLFKRMNQEIKSHVDKTFSK-QRSTMFDVAKAIPPHIISYGLEHAISSGNW 2262
            G L++LLFEDLFK M  E++  VD   SK  RS+ FD+++ I    I+ GLE  +S+GN+
Sbjct: 373  GQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNF 432

Query: 2261 NVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPCDT 2082
            +VKRFKM RKG+TQV++RLS+I +LGHMTR+  QFEK+RKVSGPRALQ SQWGMLCPCDT
Sbjct: 433  DVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 492

Query: 2081 PEGEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFNGL 1902
            PEGEACGLVKNLALMTHVTTDEEE PLI+LC+ LGVEDL LLSGEELH+  ++L+IFNGL
Sbjct: 493  PEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGL 552

Query: 1901 MLGIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNGIS 1722
            +LG HR+PK FA  +R LRRAGKIGEFVSVFVN+KQRCVY+ASDGGRVCRPLVIAD GIS
Sbjct: 553  ILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGIS 612

Query: 1721 RIKEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSHIEIEPFTI 1542
            RIKEHHMKEL DG R+FDDFLREGL+EYLDVNEENNALIALYE +AT  T+HIEIEPFTI
Sbjct: 613  RIKEHHMKELLDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTI 672

Query: 1541 LGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTKT 1362
            LGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+NQLCRMD+LLYLLVYPQRPLLTT+T
Sbjct: 673  LGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRT 732

Query: 1361 IELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKHPN 1182
            IELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV+KKY+A+ +K+ N
Sbjct: 733  IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYAN 792

Query: 1181 RTQDRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNPMAL 1002
             T DRI+ P   +G    R Q LD+DG+AAPGEII+ +D+YINK++P +TR  + +P   
Sbjct: 793  STSDRILRP-DRTGPGAERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQ 851

Query: 1001 PDSEYKFTPQTYKAP--EPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRHGQK 828
             DS Y+   QTYK P  E  VVD+V L S++   L IKFL R TRRPELGDKFSSRHGQK
Sbjct: 852  TDSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQK 911

Query: 827  GVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYGSAF 648
            GVCG IVQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGV CG+FHYGSAF
Sbjct: 912  GVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAF 971

Query: 647  GEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMVVDK 468
            GEPSGHAD VE+I  TLVKHGF Y+GKD+IYSGITG PLQAYIFMGPIYYQKLKHMV+DK
Sbjct: 972  GEPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDK 1031

Query: 467  MHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFEIQV 288
            MHAR SGPR+MLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I ERLM+SSD FE+QV
Sbjct: 1032 MHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQV 1091

Query: 287  CTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAEA 114
            C  CGLLGYYNHKLK G CSTCK+G+ I++MKLPYACKLL QELQSMNIVPRL+LAEA
Sbjct: 1092 CRVCGLLGYYNHKLKAGICSTCKNGDNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1149


>ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina]
            gi|557534507|gb|ESR45625.1| hypothetical protein
            CICLE_v10000078mg [Citrus clementina]
          Length = 1149

 Score = 1642 bits (4253), Expect = 0.0
 Identities = 812/1138 (71%), Positives = 951/1138 (83%), Gaps = 4/1138 (0%)
 Frame = -2

Query: 3515 NERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISEN 3336
            +++ LAAPVK+ VDKFQLLP FLKVRGLVKQH+DSFN+FVN  I+KI+  +AN++++S  
Sbjct: 17   DKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIV--RANDRIVSGI 74

Query: 3335 NPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIV-VRK 3159
            +P+ +L++ D+R+ +P +  D +  +  PH CRL DMTYAAPI V++EY +G+       
Sbjct: 75   DPSIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTM 134

Query: 3158 GKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSK 2979
             K  + IGR+PIMLRSC+C+L GK E ELA+LGECPLDPGGYF++KGTEKV+LIQEQLSK
Sbjct: 135  EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 194

Query: 2978 NRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIE 2799
            NR++IDTD KG         T   KSKT+I ++    YL LN F + +PI++V+KAMG+E
Sbjct: 195  NRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGME 254

Query: 2798 SDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKV 2619
            SDQE VQMVGRDPR+  +L PS++ CA+  IYT+E ALEYL  KVK   FG+  ++R   
Sbjct: 255  SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDRE-- 312

Query: 2618 DEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELA 2439
              A  IL +VFLANVPVH  +FRPKC YVAVMLRRM+EAMLN +A+DDKDYVGNKRLEL+
Sbjct: 313  GRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELS 372

Query: 2438 GVLIALLFEDLFKRMNQEIKSHVDKTFSK-QRSTMFDVAKAIPPHIISYGLEHAISSGNW 2262
            G L++LLFEDLFK M  E++  VD   SK  RS+ FD+++ I    I+ GLE  +S+GN+
Sbjct: 373  GQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNF 432

Query: 2261 NVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPCDT 2082
            +VKRFKM RKG+TQV++RLS+I +LGHMTR+  QFEK+RKVSGPRALQ SQWGMLCPCDT
Sbjct: 433  DVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 492

Query: 2081 PEGEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFNGL 1902
            PEGEACGLVKNLALMTHVTTDEEE PLI+LC+ LGVEDL LLSGEELH+  ++L+IFNGL
Sbjct: 493  PEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGL 552

Query: 1901 MLGIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNGIS 1722
            +LG HR+PK FA  +R LRRAGKIGEFVSVFVN+KQRCVY+ASDGGRVCRPLVIAD GIS
Sbjct: 553  ILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGIS 612

Query: 1721 RIKEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSHIEIEPFTI 1542
            RIKEHHMKEL DG R+FDDFLREGL+EYLDVNEENNALIALYE +AT  T+HIEIEPFTI
Sbjct: 613  RIKEHHMKELSDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTI 672

Query: 1541 LGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTKT 1362
            LGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+NQLCRMD+LLYLLVYPQRPLLTT+T
Sbjct: 673  LGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRT 732

Query: 1361 IELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKHPN 1182
            IELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV+KKY+A+ +K+ N
Sbjct: 733  IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYAN 792

Query: 1181 RTQDRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNPMAL 1002
             T DRI+ P   +G    R Q LD+DG+AAPGEII+ +D+YINK++P +TR  + +P   
Sbjct: 793  STSDRILRP-DRTGPGSERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQ 851

Query: 1001 PDSEYKFTPQTYKAP--EPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRHGQK 828
             DS Y+   QTYK P  E  VVD+V L S++   L IKFL R TRRPELGDKFSSRHGQK
Sbjct: 852  TDSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQK 911

Query: 827  GVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYGSAF 648
            GVCG IVQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGV CG+FHYGSAF
Sbjct: 912  GVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAF 971

Query: 647  GEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMVVDK 468
            GEPSGHAD VE+I  TLVKHGF Y+GKD+IYSGITG PLQAYIFMGPIYYQKLKHMV+DK
Sbjct: 972  GEPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDK 1031

Query: 467  MHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFEIQV 288
            MHAR SGPR+MLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I ERLM+SSD FE+QV
Sbjct: 1032 MHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQV 1091

Query: 287  CTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAEA 114
            C  CGLLGYYNHKLK G CSTCK+G  I++MKLPYACKLL QELQSMNIVPRL+LAEA
Sbjct: 1092 CRVCGLLGYYNHKLKAGICSTCKNGNNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1149


>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1142

 Score = 1642 bits (4251), Expect = 0.0
 Identities = 815/1136 (71%), Positives = 952/1136 (83%), Gaps = 7/1136 (0%)
 Frame = -2

Query: 3500 AAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNFY 3321
            A PVK AVDKF LLP FLKVRGLVKQH+DSFN+FV  +IKKI+  +AN++++S  +P+ Y
Sbjct: 12   ADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIV--RANDRIVSSVDPSIY 69

Query: 3320 LKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIV-VRKGKGAI 3144
            L++ D+R+  P +  D +  +  PH CRL DMTYAAPI V++EY  G+ +   R  K  +
Sbjct: 70   LRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGSHVQKTRVEKNDV 129

Query: 3143 TIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRILI 2964
             IGR+PIMLRSC C+L  K E ELA+LGECPLDPGGYFVVKGTEKVILIQEQLSKNRI+I
Sbjct: 130  VIGRMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIII 189

Query: 2963 DTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESDQEF 2784
            DTD KG         T   KSKT+I+++ E  +L+LN FT  +PI+IV+KAMG+ESDQE 
Sbjct: 190  DTDKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIPIMIVMKAMGMESDQEV 249

Query: 2783 VQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKVDEARD 2604
            VQMVGR+PR+  +L PS++ CAS+GIYT++ ALE+L  KVK + F N   E  K      
Sbjct: 250  VQMVGRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLPFYNPSLE--KEGRGMA 307

Query: 2603 ILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELAGVLIA 2424
            IL + F+ANVPV + +FRPKC+YVAVMLRRM++A+LN +A+DDKDYVGNKRLEL+G LI+
Sbjct: 308  ILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLELSGQLIS 367

Query: 2423 LLFEDLFKRMNQEIKSHVDKTFSK-QRSTMFDVAKA---IPPHIISYGLEHAISSGNWNV 2256
            LLFEDLFK M  E+K  +D   +K  RS+ FD ++    I    I+ GLE  +S+GNW+V
Sbjct: 368  LLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQCLRFIVRDSITVGLERTLSTGNWDV 427

Query: 2255 KRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPCDTPE 2076
            KRF+M RKG++QVV+RLSYI SLGHMT+I  QFEK+RKVSGPRALQ SQWGMLCPCDTPE
Sbjct: 428  KRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 487

Query: 2075 GEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFNGLML 1896
            GEACGLVKNLALMTHVTTDEEE+PLI+LC++LGVEDL LLSGEELH+  ++LIIFNGL+L
Sbjct: 488  GEACGLVKNLALMTHVTTDEEESPLISLCYSLGVEDLELLSGEELHTPNSFLIIFNGLIL 547

Query: 1895 GIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNGISRI 1716
            G HR+P+RFA+ LR LRRAGKIGEFVSVFVN+KQ CVY+ASDGGRVCRP+VIAD G SRI
Sbjct: 548  GKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPVVIADKGKSRI 607

Query: 1715 KEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSHIEIEPFTILG 1536
            KEHHMKEL DG RTFDDFLR+GL+EYLDVNEENNALIALYE++A   T+HIEIEPFTILG
Sbjct: 608  KEHHMKELIDGVRTFDDFLRDGLIEYLDVNEENNALIALYEADAKPETTHIEIEPFTILG 667

Query: 1535 VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTKTIE 1356
            VCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMD+LLYLLVYPQRPLLTT+TIE
Sbjct: 668  VCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLTTRTIE 727

Query: 1355 LVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKHPNRT 1176
            LV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK+SAV +++ N  
Sbjct: 728  LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKFSAVNQRYENNA 787

Query: 1175 QDRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNPMALPD 996
             DRI+ P    G    R Q LD+DG+AAPGEII+ +DIYINK++P  T+  + +P+ LPD
Sbjct: 788  SDRIVRPL-KVGHDAERMQILDDDGLAAPGEIIKPNDIYINKESPIITKGPLISPVGLPD 846

Query: 995  SEYKFTPQTYKAP--EPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRHGQKGV 822
            S YK + QT+K P  E SVVD+V L S++   L IKFL R TRRPE+GDKFSSRHGQKGV
Sbjct: 847  SAYKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHTRRPEVGDKFSSRHGQKGV 906

Query: 821  CGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYGSAFGE 642
            CG I+QQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGV CG+FHYGSAFGE
Sbjct: 907  CGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGE 966

Query: 641  PSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMVVDKMH 462
            PSGHADKVETI  TLVKHGF YSGKD IYSGITG PLQAYIFMGPIYYQKLKHMV+DKMH
Sbjct: 967  PSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMH 1026

Query: 461  ARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFEIQVCT 282
            AR SGPR+MLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I ERLM+SSD FE+QVC 
Sbjct: 1027 ARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCR 1086

Query: 281  KCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAEA 114
             CGLLGYYNHKLK+G CSTCK+G+ I+TMKLPYACKLLFQELQ+MN+VPRL+L EA
Sbjct: 1087 VCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPRLKLTEA 1142


>gb|EOY19609.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
          Length = 1158

 Score = 1623 bits (4202), Expect = 0.0
 Identities = 809/1166 (69%), Positives = 953/1166 (81%), Gaps = 5/1166 (0%)
 Frame = -2

Query: 3596 KYKIFVRHNNCWQKSFSTMEDDEVDYENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHI 3417
            K +  + +NN    + S M  D+      + LAAP+K+AVDKFQLLP FLKVRGLVKQH+
Sbjct: 4    KQEDLLLNNNTNNSNVSEMPVDK------QKLAAPIKSAVDKFQLLPEFLKVRGLVKQHL 57

Query: 3416 DSFNFFVNHEIKKIIHAKANEKVISENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCR 3237
            DSFN+FVN  IKKI+  +AN++++S  +P+ YL++ D+R+  P +  + +  +  PH CR
Sbjct: 58   DSFNYFVNTGIKKIV--RANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCR 115

Query: 3236 LRDMTYAAPIKVDVEYTRGNE-IVVRKGKGAITIGRLPIMLRSCQCILTGKSETELAKLG 3060
            L DMTYAAPI V++EY +G+     R  K  + IGR+PIMLRSC C+L GK E ELA+LG
Sbjct: 116  LSDMTYAAPIFVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLG 175

Query: 3059 ECPLDPGGYFVVKGTEKVILIQEQLSKNRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVK 2880
            ECPLDPGGYFV+KG EKVILIQEQLSKNRI+ID D KG         +   KSKT+I ++
Sbjct: 176  ECPLDPGGYFVIKGAEKVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQME 235

Query: 2879 HEIFYLKLNTFTEDVPIVIVVKAMGIESDQEFVQMVGRDPRFGGILAPSLQNCASYGIYT 2700
             E  YL LN F + +PI++V+KAMG+ESDQE VQMVGRDP +  +L PS++ CA  GIYT
Sbjct: 236  KEKIYLLLNQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYT 295

Query: 2699 KELALEYLGTKVKSMRFGNEKSERSKVDEARDILHNVFLANVPVHKFDFRPKCIYVAVML 2520
            +E ALEYL TKVK + +    SE  K   A  IL +VFLANVPV   +FRPKC+YVAVML
Sbjct: 296  QEQALEYLETKVKRVMYTGPASE--KEGRALSILRDVFLANVPVRSNNFRPKCLYVAVML 353

Query: 2519 RRMIEAMLNPEAVDDKDYVGNKRLELAGVLIALLFEDLFKRMNQEIKSHVDKTFSK-QRS 2343
            RRM+EA+LN +A+DDKDYVGNKRLEL+G LI+LLFEDLFK    E++  +D   SK  RS
Sbjct: 354  RRMVEAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRS 413

Query: 2342 TMFDVAKAIPPH-IISYGLEHAISSGNWNVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQ 2166
            +  D ++ +     I++GLE  +S+GN+++KRFKM RKG+TQV++RLS+I +LG+MT++ 
Sbjct: 414  SALDPSQFLRSRETITFGLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVS 473

Query: 2165 SQFEKTRKVSGPRALQSSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLITLCH 1986
             QFEK+RKVSGPRALQ SQWGMLCPCDTPEGEACGLVKNLALMTHVTTDE+E PLI+LC+
Sbjct: 474  PQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCY 533

Query: 1985 TLGVEDLSLLSGEELHSRKAYLIIFNGLMLGIHRQPKRFAHFLRILRRAGKIGEFVSVFV 1806
             LGVEDL LLSGEELH+  ++L+I NGL+LG HR+P+ FA  +R LRRAGK+GEFVSVFV
Sbjct: 534  CLGVEDLELLSGEELHTPNSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFV 593

Query: 1805 NDKQRCVYVASDGGRVCRPLVIADNGISRIKEHHMKELRDGFRTFDDFLREGLVEYLDVN 1626
            N+KQRCVY+ASDGGRVCRPLVIAD G+SRIKEHHMKEL DG RTFDDFLR+GL+EYLDVN
Sbjct: 594  NEKQRCVYIASDGGRVCRPLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVN 653

Query: 1625 EENNALIALYESEATESTSHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGN 1446
            EENNALIALYE EAT  T+HIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGN
Sbjct: 654  EENNALIALYEGEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGN 713

Query: 1445 IAYNQLCRMDTLLYLLVYPQRPLLTTKTIELVKYDKLGAGQNATVAVMSYSGYDIEDAIV 1266
            IAYNQLCRMDTLLYLLVYPQRPLLTT+TIELV YDKLGAGQNATVAVMSYSGYDIEDAIV
Sbjct: 714  IAYNQLCRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIV 773

Query: 1265 MNKASLDRGFGRCIVMKKYSAVLKKHPNRTQDRIIGPTSSSGRVDTRCQALDNDGIAAPG 1086
            MNK+SLDRGFGRCIVMK+YSAV +K+     DRI+ P   +G    R Q LD+DGIA PG
Sbjct: 774  MNKSSLDRGFGRCIVMKRYSAVNQKYETGASDRILRP-QRTGPGSERMQILDDDGIATPG 832

Query: 1085 EIIRNHDIYINKQTPTKTREEVKNPMALPDSEYKFTPQTYKAP--EPSVVDKVVLTSNEE 912
            EIIR +DIYINK++   TR    +  +LPDS Y+   QTYK P  E  VVD+V L ++  
Sbjct: 833  EIIRPNDIYINKESSIHTRGSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRN 892

Query: 911  DALNIKFLFRQTRRPELGDKFSSRHGQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPS 732
              L+IKFL R TRRPE+GDKFSSRHGQKGVCG I+QQEDFPFSERGICPDLIMNPHGFPS
Sbjct: 893  SNLSIKFLIRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPS 952

Query: 731  RMTIGKMIELLGGKAGVCCGKFHYGSAFGEPSGHADKVETICATLVKHGFCYSGKDLIYS 552
            RMT+GKMIELLGGKAGV CG+FHYGSAFGEPSGHAD+VE I  TL+KHGF Y+GKD IYS
Sbjct: 953  RMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYS 1012

Query: 551  GITGYPLQAYIFMGPIYYQKLKHMVVDKMHARASGPRMMLTRQPTEGRSRDGGLRLGEME 372
            GITG PLQAYIFMGPIYYQKLKHMV+DKMHAR +GPR+MLTRQPTEGR+R+GGLR+GEME
Sbjct: 1013 GITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEME 1072

Query: 371  RDCLIAYGASMMILERLMISSDQFEIQVCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMK 192
            RDCLIAYGASM+I ERLMISSD FE+QVC KCGLLGYY+HKLK G CS+CK+G+ ++TMK
Sbjct: 1073 RDCLIAYGASMLIFERLMISSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMK 1132

Query: 191  LPYACKLLFQELQSMNIVPRLQLAEA 114
            LPYACKLL QELQSMNIVPRL+L+EA
Sbjct: 1133 LPYACKLLIQELQSMNIVPRLKLSEA 1158


>ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Solanum
            lycopersicum]
          Length = 1183

 Score = 1617 bits (4186), Expect = 0.0
 Identities = 807/1155 (69%), Positives = 941/1155 (81%), Gaps = 5/1155 (0%)
 Frame = -2

Query: 3563 WQKSFSTMEDDEVDYENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEI 3384
            +  + S   +D     ++++LA+ +K  VDK+QL+P FLKVRGLVKQH+DSFN+FV  EI
Sbjct: 33   YDSTMSNTTEDSNQGIDKQHLASHIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEI 92

Query: 3383 KKIIHAKANEKVISENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIK 3204
            KKI+  +AN+++ S  +PN YL+Y D+ +  P +  D +  +  P +CRL D TYAAPI 
Sbjct: 93   KKIV--RANQEIRSTLDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIY 150

Query: 3203 VDVEYTRGN--EIVVRKGKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYF 3030
            V ++YT G+  +  V   K  I IGR+PIMLRS  C+L GK E ELA+LGECPLDPGGYF
Sbjct: 151  VTIDYTTGSHGQTSVSTKKNVI-IGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYF 209

Query: 3029 VVKGTEKVILIQEQLSKNRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNT 2850
            V+KGTEKVILIQEQLSKNRI+IDTD KG         T + KSKTII ++ E  YL+LN 
Sbjct: 210  VIKGTEKVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNM 269

Query: 2849 FTEDVPIVIVVKAMGIESDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGT 2670
            F   VPI++V+KAMG+ESDQE VQM+GRDPRF  +L PS++ CA   +YT++ ALE+L +
Sbjct: 270  FKTKVPIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQQQALEFLES 329

Query: 2669 KVKSMRFGNEKSERSKVDEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNP 2490
                           K   A  IL ++FLANVPVH+ +FR KCIYVAVM+RRM+EA+LN 
Sbjct: 330  DKMLKMPSYSTGPIEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNK 389

Query: 2489 EAVDDKDYVGNKRLELAGVLIALLFEDLFKRMNQEIKSHVDKTFSK-QRSTMFDVAKAIP 2313
            +A+DDKDYVGNKRLEL+G L++LLFEDLFK MN E +  +D   ++  RS+  D+++ I 
Sbjct: 390  DAMDDKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYII 449

Query: 2312 PHIISYGLEHAISSGNWNVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSG 2133
               I+ GLE  +S+GNW+VKRF+M RKG+TQVV+RLSYI SLGHMT+I  QFEK+RKVSG
Sbjct: 450  KDSITMGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSG 509

Query: 2132 PRALQSSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLS 1953
            PRALQ SQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDE+E P+++LC+ LGVEDL  LS
Sbjct: 510  PRALQPSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLS 569

Query: 1952 GEELHSRKAYLIIFNGLMLGIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVAS 1773
             EELH   +YLI  NGL+LG H+ P+RFA+ +R LRRAGK+GEFVS+FVN+KQRCVY+AS
Sbjct: 570  PEELHMPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKVGEFVSIFVNEKQRCVYIAS 629

Query: 1772 DGGRVCRPLVIADNGISRIKEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYE 1593
            DGGRVCRPLVIAD G+SRIKEHHM+ELRDG R FD FL++GL+EYLDVNEENN LIALYE
Sbjct: 630  DGGRVCRPLVIADKGVSRIKEHHMRELRDGLRDFDSFLKDGLIEYLDVNEENNTLIALYE 689

Query: 1592 SEATESTSHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 1413
             EAT  T+HIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD 
Sbjct: 690  KEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDG 749

Query: 1412 LLYLLVYPQRPLLTTKTIELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFG 1233
            LLYLLVYPQRPLLTT+TIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFG
Sbjct: 750  LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 809

Query: 1232 RCIVMKKYSAVLKKHPNRTQDRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYIN 1053
            RCIVMKKYSA+ +K+ N T DRII P       D R Q LD+DG+AAPGE IRNHDIYIN
Sbjct: 810  RCIVMKKYSAICQKYENGTSDRIIKPQRQGPEAD-RMQILDDDGMAAPGETIRNHDIYIN 868

Query: 1052 KQTPTKTREEVKNPMALPDSEYKFTPQTYKAP--EPSVVDKVVLTSNEEDALNIKFLFRQ 879
            K++PT TR  V +PM LPDS YK + QTYK P  E +VVD+V L S+  + L+IKF+ R 
Sbjct: 869  KESPTVTRTPVTSPMGLPDSAYKSSKQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRH 928

Query: 878  TRRPELGDKFSSRHGQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELL 699
            TRRPELGDKFSSRHGQKGVCG IVQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELL
Sbjct: 929  TRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELL 988

Query: 698  GGKAGVCCGKFHYGSAFGEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYI 519
            G KAGV CG+FHYGSAFGEPSGHAD V+ I  TLVKHGF Y+GKD IYSGITG PLQAYI
Sbjct: 989  GSKAGVSCGRFHYGSAFGEPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYI 1048

Query: 518  FMGPIYYQKLKHMVVDKMHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASM 339
            FMGPIYYQKLKHMVVDKMHAR SGPR+M+TRQPTEGRSR+GGLR+GEMERDCLIAYGASM
Sbjct: 1049 FMGPIYYQKLKHMVVDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASM 1108

Query: 338  MILERLMISSDQFEIQVCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQE 159
            +I ERLMISSD FE+QVC KCGLLGYYN+KLK G CS CK+GE I+TMKLPYACKLLFQE
Sbjct: 1109 LIYERLMISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQE 1168

Query: 158  LQSMNIVPRLQLAEA 114
            LQSMNIVPRL+LAEA
Sbjct: 1169 LQSMNIVPRLKLAEA 1183


>ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Solanum tuberosum] gi|565393087|ref|XP_006362215.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Solanum tuberosum]
          Length = 1153

 Score = 1616 bits (4185), Expect = 0.0
 Identities = 806/1155 (69%), Positives = 942/1155 (81%), Gaps = 5/1155 (0%)
 Frame = -2

Query: 3563 WQKSFSTMEDDEVDYENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEI 3384
            +  + S   +D     ++++LA+P+K  VDK+QL+P FLKVRGLVKQH+DSFN+FV  EI
Sbjct: 3    YDSTMSNTTEDSNQGIDKQHLASPIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEI 62

Query: 3383 KKIIHAKANEKVISENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIK 3204
            KKI+  +AN+++ S  +PN YL+Y D+ +  P +  D +  +  P +CRL D TYAAPI 
Sbjct: 63   KKIV--RANQEIRSILDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIY 120

Query: 3203 VDVEYTRGN--EIVVRKGKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYF 3030
            V +EYT G+  +  V   K  I IGR+PIMLRS  C+L GK E ELA+LGECPLDPGGYF
Sbjct: 121  VTIEYTTGSHGQTSVSTKKNVI-IGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYF 179

Query: 3029 VVKGTEKVILIQEQLSKNRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNT 2850
            V+KGTEKVILIQEQLSKNRI+IDTD KG         T + KSKTII ++ E  YL+LN 
Sbjct: 180  VIKGTEKVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNM 239

Query: 2849 FTEDVPIVIVVKAMGIESDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGT 2670
            F   VPI++V+KAMG+ESDQE VQM+GRDPRF  +L PS++ CA   +YT+  ALE+L +
Sbjct: 240  FKTKVPIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQHQALEFLES 299

Query: 2669 KVKSMRFGNEKSERSKVDEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNP 2490
                           K   A  IL ++FLANVPVH+ +FR KCIYVAVM+RRM+EA+LN 
Sbjct: 300  DKMLKMPSYSTGPVEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNK 359

Query: 2489 EAVDDKDYVGNKRLELAGVLIALLFEDLFKRMNQEIKSHVDKTFSK-QRSTMFDVAKAIP 2313
            +A+DDKDYVGNKRLEL+G L++LLFEDLFK MN E +  +D   ++  RS+  D+++ I 
Sbjct: 360  DAMDDKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIV 419

Query: 2312 PHIISYGLEHAISSGNWNVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSG 2133
               I+ GLE  +S+GNW+VKRF+M RKG+TQVV+RLSYI SLGHMT+I  QFEK+RKVSG
Sbjct: 420  KDSITMGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSG 479

Query: 2132 PRALQSSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLS 1953
            PRALQ SQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDE+E P+++LC+ LGVEDL  LS
Sbjct: 480  PRALQPSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLS 539

Query: 1952 GEELHSRKAYLIIFNGLMLGIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVAS 1773
             EELH   +YLI  NGL+LG H+ P+RFA+ +R LRRAGKIGEFVS+FVN+KQRCVY+AS
Sbjct: 540  PEELHMPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKIGEFVSIFVNEKQRCVYIAS 599

Query: 1772 DGGRVCRPLVIADNGISRIKEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYE 1593
            DGGRVCRPLVIAD G+SRIKEHHM+ELRDG R FD FL++GL+EYLDVNEENN LIALYE
Sbjct: 600  DGGRVCRPLVIADKGVSRIKEHHMRELRDGVRDFDSFLKDGLIEYLDVNEENNTLIALYE 659

Query: 1592 SEATESTSHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 1413
             EAT  T+HIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD 
Sbjct: 660  KEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDG 719

Query: 1412 LLYLLVYPQRPLLTTKTIELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFG 1233
            LLYLLVYPQRPLLTT+TIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFG
Sbjct: 720  LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 779

Query: 1232 RCIVMKKYSAVLKKHPNRTQDRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYIN 1053
            RCIVMKKYSA+ +K+ N T DRII P       D + Q LD+DG+AAPGE IRNHDIYIN
Sbjct: 780  RCIVMKKYSAICQKYENGTSDRIIKPQRQGFEAD-KMQILDDDGMAAPGETIRNHDIYIN 838

Query: 1052 KQTPTKTREEVKNPMALPDSEYKFTPQTYKAP--EPSVVDKVVLTSNEEDALNIKFLFRQ 879
            K++PT TR  + +PM LPDS YK + QTYK P  E +VVD+V L S+  + L+IKF+ R 
Sbjct: 839  KESPTVTRTPITSPMGLPDSAYKTSRQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRH 898

Query: 878  TRRPELGDKFSSRHGQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELL 699
            TRRPE+GDKFSSRHGQKGVCG IVQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELL
Sbjct: 899  TRRPEIGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELL 958

Query: 698  GGKAGVCCGKFHYGSAFGEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYI 519
            G KAGV CG+FHYGSAFGEPSGHAD V++I  TLVKHGF Y+GKD IYSGITG PLQAYI
Sbjct: 959  GSKAGVSCGRFHYGSAFGEPSGHADTVDSISETLVKHGFSYNGKDFIYSGITGMPLQAYI 1018

Query: 518  FMGPIYYQKLKHMVVDKMHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASM 339
            FMGPIYYQKLKHMV+DKMHAR SGPR+M+TRQPTEGRSR+GGLR+GEMERDCLIAYGASM
Sbjct: 1019 FMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASM 1078

Query: 338  MILERLMISSDQFEIQVCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQE 159
            +I ERLMISSD FE+QVC KCGLLGYYN+KLK G CS CK+GE I+TMKLPYACKLLFQE
Sbjct: 1079 LIYERLMISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQE 1138

Query: 158  LQSMNIVPRLQLAEA 114
            LQSMNIVPRL+LAEA
Sbjct: 1139 LQSMNIVPRLKLAEA 1153


>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
            sativus]
          Length = 1158

 Score = 1612 bits (4174), Expect = 0.0
 Identities = 804/1147 (70%), Positives = 951/1147 (82%), Gaps = 6/1147 (0%)
 Frame = -2

Query: 3536 DDEVDYENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKAN 3357
            D ++D   ++ +  P+K+AVDKFQLLP FLKVRGLVKQH+DSFN+FVN EIKKI+  KAN
Sbjct: 23   DSDID---KQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTEIKKIV--KAN 77

Query: 3356 EKVISENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGN 3177
            +++ S  +P+ YL++LD+R+  P +  + +     PH CRL D+TYAAPI VD+EY   +
Sbjct: 78   DRIESSTDPSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSDLTYAAPILVDIEYIEES 137

Query: 3176 EIV-VRKGKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVIL 3000
                  + K  + IGR+PIMLRS  C+L GK E ELA+LGECPLDPGGYF++KGTEKV+L
Sbjct: 138  HAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFIIKGTEKVVL 197

Query: 2999 IQEQLSKNRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTED-VPIVI 2823
            IQEQLSKNRI+IDTD KG         T   KSKT+I +++E  YL+LN FT   +PI++
Sbjct: 198  IQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFTTPKIPIMV 257

Query: 2822 VVKAMGIESDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGN 2643
            V+KAMG+ES QE VQMVGRDPR+G +L PS++ CA   IYT+E ALEYL TKVK  +F +
Sbjct: 258  VLKAMGMESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETKVKKFQFAS 317

Query: 2642 EKSERSKVDEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYV 2463
               E  K   A  IL +VFLANVPV+K +F PKCIYVAVM+RRM++A+L+ +A+DDKDYV
Sbjct: 318  APPE--KEGRALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAMDDKDYV 375

Query: 2462 GNKRLELAGVLIALLFEDLFKRMNQEIKSHVDKTFSKQ-RSTMFDVAKAIPPHIISYGLE 2286
            GNKRLEL+G LI+LLFEDLFK M  E+K  +DK   K  RS+ FD ++ +  +IIS+GLE
Sbjct: 376  GNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNIISFGLE 435

Query: 2285 HAISSGNWNVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQW 2106
              +S+GNW+VKRF+M RKG++QV++RLS+I+++GH+TR+  QFEK+RKVSGPRALQ SQW
Sbjct: 436  RTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQW 495

Query: 2105 GMLCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKA 1926
            GMLCPCDTPEGEACGLVKNLALMTHVTTD+EE PLI+LC+ LGVEDL LLS EELH+  +
Sbjct: 496  GMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEELHTPNS 555

Query: 1925 YLIIFNGLMLGIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPL 1746
            +L+IFNG +LG HR+P+ FA  +R+LRRAGKIGEFVSVFVN+KQ CVY+ASDGGRVCRPL
Sbjct: 556  FLVIFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPL 615

Query: 1745 VIADNGISRIKEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSH 1566
            VIAD G+SRIKE+HMKEL DG RTFDDFLR+GL+EYLDVNEENNALIALYE EAT  T+H
Sbjct: 616  VIADKGVSRIKEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTH 675

Query: 1565 IEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQ 1386
            IEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTLLYLLVYPQ
Sbjct: 676  IEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVYPQ 735

Query: 1385 RPLLTTKTIELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYS 1206
            RPLLTTKTIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV KKYS
Sbjct: 736  RPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVFKKYS 795

Query: 1205 AVLKKHPNRTQDRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTRE 1026
            +V +K+ N T DRI+ P  +        Q LD+DG+AAPGEIIR +DIY+NKQ+P   + 
Sbjct: 796  SVNQKYENNTADRIVRPNRNED-FTGNMQILDDDGLAAPGEIIRPNDIYVNKQSPIIMK- 853

Query: 1025 EVKNPM-ALPDSEYKFTPQTYKAP--EPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGD 855
               +P+  +PD+ Y+   Q +K    EP+VVD+V L++++ D L IKFL RQTRRPELGD
Sbjct: 854  --GSPLPGIPDNAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRPELGD 911

Query: 854  KFSSRHGQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCC 675
            KFSSRHGQKGVCG IVQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGV C
Sbjct: 912  KFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSC 971

Query: 674  GKFHYGSAFGEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQ 495
            G+FHYGSAFGEPSGHADKV+ I  TL+K GF Y+GKD +YSGITG PLQAYIFMGPIYYQ
Sbjct: 972  GRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQ 1031

Query: 494  KLKHMVVDKMHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMI 315
            KLKHMV+DKMHAR SGPR+MLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I ERLMI
Sbjct: 1032 KLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMI 1091

Query: 314  SSDQFEIQVCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVP 135
            SSD FE+QVC  CGLLGYYNHKLK G CS+CK+G+ I+TMKLPYACKLL QELQSMNIVP
Sbjct: 1092 SSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVP 1151

Query: 134  RLQLAEA 114
            RL+LAEA
Sbjct: 1152 RLKLAEA 1158


>gb|EOY19611.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
          Length = 1153

 Score = 1608 bits (4165), Expect = 0.0
 Identities = 804/1166 (68%), Positives = 948/1166 (81%), Gaps = 5/1166 (0%)
 Frame = -2

Query: 3596 KYKIFVRHNNCWQKSFSTMEDDEVDYENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHI 3417
            K +  + +NN    + S M  D+      + LAAP+K+AVDKFQLLP FLKVRGLVKQH+
Sbjct: 4    KQEDLLLNNNTNNSNVSEMPVDK------QKLAAPIKSAVDKFQLLPEFLKVRGLVKQHL 57

Query: 3416 DSFNFFVNHEIKKIIHAKANEKVISENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCR 3237
            DSFN+FVN  IKKI+  +AN++++S  +P+ YL++ D+R+  P +  + +  +  PH CR
Sbjct: 58   DSFNYFVNTGIKKIV--RANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCR 115

Query: 3236 LRDMTYAAPIKVDVEYTRGNE-IVVRKGKGAITIGRLPIMLRSCQCILTGKSETELAKLG 3060
            L DMTYAAPI V++EY +G+     R  K  + IGR+PIMLRSC C+L GK E ELA+LG
Sbjct: 116  LSDMTYAAPIFVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLG 175

Query: 3059 ECPLDPGGYFVVKGTEKVILIQEQLSKNRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVK 2880
            ECPLDPGGYFV+KG EK     EQLSKNRI+ID D KG         +   KSKT+I ++
Sbjct: 176  ECPLDPGGYFVIKGAEK-----EQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQME 230

Query: 2879 HEIFYLKLNTFTEDVPIVIVVKAMGIESDQEFVQMVGRDPRFGGILAPSLQNCASYGIYT 2700
             E  YL LN F + +PI++V+KAMG+ESDQE VQMVGRDP +  +L PS++ CA  GIYT
Sbjct: 231  KEKIYLLLNQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYT 290

Query: 2699 KELALEYLGTKVKSMRFGNEKSERSKVDEARDILHNVFLANVPVHKFDFRPKCIYVAVML 2520
            +E ALEYL TKVK + +    SE  K   A  IL +VFLANVPV   +FRPKC+YVAVML
Sbjct: 291  QEQALEYLETKVKRVMYTGPASE--KEGRALSILRDVFLANVPVRSNNFRPKCLYVAVML 348

Query: 2519 RRMIEAMLNPEAVDDKDYVGNKRLELAGVLIALLFEDLFKRMNQEIKSHVDKTFSK-QRS 2343
            RRM+EA+LN +A+DDKDYVGNKRLEL+G LI+LLFEDLFK    E++  +D   SK  RS
Sbjct: 349  RRMVEAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRS 408

Query: 2342 TMFDVAKAIPPH-IISYGLEHAISSGNWNVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQ 2166
            +  D ++ +     I++GLE  +S+GN+++KRFKM RKG+TQV++RLS+I +LG+MT++ 
Sbjct: 409  SALDPSQFLRSRETITFGLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVS 468

Query: 2165 SQFEKTRKVSGPRALQSSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLITLCH 1986
             QFEK+RKVSGPRALQ SQWGMLCPCDTPEGEACGLVKNLALMTHVTTDE+E PLI+LC+
Sbjct: 469  PQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCY 528

Query: 1985 TLGVEDLSLLSGEELHSRKAYLIIFNGLMLGIHRQPKRFAHFLRILRRAGKIGEFVSVFV 1806
             LGVEDL LLSGEELH+  ++L+I NGL+LG HR+P+ FA  +R LRRAGK+GEFVSVFV
Sbjct: 529  CLGVEDLELLSGEELHTPNSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFV 588

Query: 1805 NDKQRCVYVASDGGRVCRPLVIADNGISRIKEHHMKELRDGFRTFDDFLREGLVEYLDVN 1626
            N+KQRCVY+ASDGGRVCRPLVIAD G+SRIKEHHMKEL DG RTFDDFLR+GL+EYLDVN
Sbjct: 589  NEKQRCVYIASDGGRVCRPLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVN 648

Query: 1625 EENNALIALYESEATESTSHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGN 1446
            EENNALIALYE EAT  T+HIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGN
Sbjct: 649  EENNALIALYEGEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGN 708

Query: 1445 IAYNQLCRMDTLLYLLVYPQRPLLTTKTIELVKYDKLGAGQNATVAVMSYSGYDIEDAIV 1266
            IAYNQLCRMDTLLYLLVYPQRPLLTT+TIELV YDKLGAGQNATVAVMSYSGYDIEDAIV
Sbjct: 709  IAYNQLCRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIV 768

Query: 1265 MNKASLDRGFGRCIVMKKYSAVLKKHPNRTQDRIIGPTSSSGRVDTRCQALDNDGIAAPG 1086
            MNK+SLDRGFGRCIVMK+YSAV +K+     DRI+ P   +G    R Q LD+DGIA PG
Sbjct: 769  MNKSSLDRGFGRCIVMKRYSAVNQKYETGASDRILRP-QRTGPGSERMQILDDDGIATPG 827

Query: 1085 EIIRNHDIYINKQTPTKTREEVKNPMALPDSEYKFTPQTYKAP--EPSVVDKVVLTSNEE 912
            EIIR +DIYINK++   TR    +  +LPDS Y+   QTYK P  E  VVD+V L ++  
Sbjct: 828  EIIRPNDIYINKESSIHTRGSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRN 887

Query: 911  DALNIKFLFRQTRRPELGDKFSSRHGQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPS 732
              L+IKFL R TRRPE+GDKFSSRHGQKGVCG I+QQEDFPFSERGICPDLIMNPHGFPS
Sbjct: 888  SNLSIKFLIRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPS 947

Query: 731  RMTIGKMIELLGGKAGVCCGKFHYGSAFGEPSGHADKVETICATLVKHGFCYSGKDLIYS 552
            RMT+GKMIELLGGKAGV CG+FHYGSAFGEPSGHAD+VE I  TL+KHGF Y+GKD IYS
Sbjct: 948  RMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYS 1007

Query: 551  GITGYPLQAYIFMGPIYYQKLKHMVVDKMHARASGPRMMLTRQPTEGRSRDGGLRLGEME 372
            GITG PLQAYIFMGPIYYQKLKHMV+DKMHAR +GPR+MLTRQPTEGR+R+GGLR+GEME
Sbjct: 1008 GITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEME 1067

Query: 371  RDCLIAYGASMMILERLMISSDQFEIQVCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMK 192
            RDCLIAYGASM+I ERLMISSD FE+QVC KCGLLGYY+HKLK G CS+CK+G+ ++TMK
Sbjct: 1068 RDCLIAYGASMLIFERLMISSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMK 1127

Query: 191  LPYACKLLFQELQSMNIVPRLQLAEA 114
            LPYACKLL QELQSMNIVPRL+L+EA
Sbjct: 1128 LPYACKLLIQELQSMNIVPRLKLSEA 1153


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis]
            gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase
            III subunit, putative [Ricinus communis]
          Length = 1139

 Score = 1596 bits (4132), Expect = 0.0
 Identities = 801/1138 (70%), Positives = 933/1138 (81%), Gaps = 4/1138 (0%)
 Frame = -2

Query: 3515 NERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISEN 3336
            +++ L AP+K+AVDKFQLLP FLKVRGLVKQH+DSFN+FVN  IKKI+  +AN++++S  
Sbjct: 23   DKQKLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNIGIKKIV--RANDRIVSTV 80

Query: 3335 NPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGN-EIVVRK 3159
            +P  YL++ D+R+  P    D +  + +PH CRL D TYAAPI V+VEY  G+ +   R 
Sbjct: 81   DPGIYLRFKDVRIGTPSDIMDGVSEQLSPHMCRLSDKTYAAPILVNVEYIYGSHDQKTRV 140

Query: 3158 GKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSK 2979
             K  + IGR+PIMLRS  C+L GK E ELA+LGECPLDPGGYFV+KGTEKVILIQEQLSK
Sbjct: 141  EKNDVVIGRMPIMLRSRSCVLYGKDEAELARLGECPLDPGGYFVIKGTEKVILIQEQLSK 200

Query: 2978 NRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIE 2799
            NRI+IDTD KG         T   KSKTII ++ E  YL LN F + +PI++V+KAMG+E
Sbjct: 201  NRIIIDTDKKGNINASVTSSTEATKSKTIIQMEKEKMYLCLNQFVKKIPIMVVIKAMGME 260

Query: 2798 SDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKV 2619
            SDQE VQMVGRDPR+  +L PS++ CA   IYT++ ALEYL                 K 
Sbjct: 261  SDQEVVQMVGRDPRYSALLLPSIEECAGLSIYTQQKALEYLD---------------GKE 305

Query: 2618 DEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELA 2439
            + A  IL +VFLANVPVHK +FRPKC+YVAVMLRRM+EAMLN +A+DDKDYVGNKRLEL+
Sbjct: 306  NRALTILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKDAMDDKDYVGNKRLELS 365

Query: 2438 GVLIALLFEDLFKRMNQEIKSHVDKTFSKQ-RSTMFDVAKAIPPHIISYGLEHAISSGNW 2262
            G LI+LLFEDLFK M  E++  +D   +KQ RS+ FD+A+ I    I+ GLE  +S+GN+
Sbjct: 366  GQLISLLFEDLFKTMITEVQRTIDTVLTKQNRSSRFDLAQYIVRDNITNGLERTLSTGNF 425

Query: 2261 NVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPCDT 2082
            +VKRFKM RKG+TQV+ RLSYIASLG MTR+  QFEK+RKVSGPRALQ SQWGMLCPCDT
Sbjct: 426  DVKRFKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 485

Query: 2081 PEGEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFNGL 1902
            PEGEACGLVKNLALMTHVTTD+EE PLI+LC+ LGVEDL LLSGEELH+  ++L+IFNGL
Sbjct: 486  PEGEACGLVKNLALMTHVTTDDEEGPLISLCYCLGVEDLELLSGEELHTPNSFLVIFNGL 545

Query: 1901 MLGIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNGIS 1722
            +LG HR+P+ F + +R LRRAGKIGEFVSVFVN+KQR VY+ASDGGRVCRPLVIAD G+S
Sbjct: 546  ILGKHRRPQYFVNSMRKLRRAGKIGEFVSVFVNEKQRAVYLASDGGRVCRPLVIADRGVS 605

Query: 1721 RIKEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSHIEIEPFTI 1542
            RIKEHHMKELRDG RTFDDFLR+GL+EYLDVNEENNAL+ALYE EAT  T+HIEIEPFTI
Sbjct: 606  RIKEHHMKELRDGVRTFDDFLRDGLIEYLDVNEENNALVALYEGEATPETTHIEIEPFTI 665

Query: 1541 LGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTKT 1362
            LGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+LLYLLVYPQRPLLTT+T
Sbjct: 666  LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRMDSLLYLLVYPQRPLLTTRT 725

Query: 1361 IELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKHPN 1182
            IELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKY A+ +K+ N
Sbjct: 726  IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYPAIRQKYEN 785

Query: 1181 RTQDRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNPMAL 1002
               DRI+ P     R   R + LD DG+AAPGEII+  DIY+ K+ P  T   VK+  AL
Sbjct: 786  GASDRILRP----DRTVERERVLDYDGLAAPGEIIKPSDIYVKKECPIDTMGPVKSSAAL 841

Query: 1001 PDSEYKFTPQTYKAP--EPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRHGQK 828
             + +Y+ +P +YK P  E  V+D+V L+S+  + L IK + R TRRPE+GDKFSSRHGQK
Sbjct: 842  ENIKYRPSPLSYKGPEGESPVIDRVALSSDRNNNLCIKVMIRHTRRPEVGDKFSSRHGQK 901

Query: 827  GVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYGSAF 648
            GVCG I+QQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGV CG+FHYGSAF
Sbjct: 902  GVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAF 961

Query: 647  GEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMVVDK 468
            GEPSGHAD VE I  TLV  GF Y+GKD+IYSGITG PLQAYIFMGPIYYQKLKHMV+DK
Sbjct: 962  GEPSGHADTVEAISETLVNRGFSYNGKDIIYSGITGCPLQAYIFMGPIYYQKLKHMVLDK 1021

Query: 467  MHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFEIQV 288
            MHAR +GPR+MLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I ERLMISSD FE+QV
Sbjct: 1022 MHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQV 1081

Query: 287  CTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAEA 114
            C  CGLLGY+N KL+ G CSTCK+G+ I+TMKLPYACKLL QELQSMNIVPRL+LAEA
Sbjct: 1082 CRVCGLLGYFNQKLRAGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1139


>ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like isoform
            X1 [Glycine max]
          Length = 1165

 Score = 1593 bits (4125), Expect = 0.0
 Identities = 794/1139 (69%), Positives = 938/1139 (82%), Gaps = 5/1139 (0%)
 Frame = -2

Query: 3515 NERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISEN 3336
            ++R L AP+K+AVDKFQLLP FLKVRGLVKQH+DSFN+FV  +IKKI+  +AN+ +++  
Sbjct: 32   DQRVLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTDIKKIV--RANDLIVASR 89

Query: 3335 NPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVR-K 3159
             P+ YL++L++ + +P +  D +  + TP  CRL D+TYAAPI  DVEYT G+      K
Sbjct: 90   YPHIYLRFLNVGIGKPSIMIDEVTEDLTPQTCRLSDLTYAAPICADVEYTLGSHDKPDIK 149

Query: 3158 GKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSK 2979
             K  + IGR+PIMLRSC C+L G+ E ELAKLGECPLDPGGYFV+KGTEKVILIQEQLSK
Sbjct: 150  RKLKVEIGRMPIMLRSCCCVLHGRDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQLSK 209

Query: 2978 NRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIE 2799
            NRI+IDTD KG         T + K+KT+++++ E  +L+LN F + VP+++V+KAMG+E
Sbjct: 210  NRIIIDTDKKGNITASVTSSTEKIKTKTVVVMEKEKLWLQLNKFPKKVPLMVVMKAMGME 269

Query: 2798 SDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKV 2619
            SDQE  QMVGRDPR+  +L PS++ C    +YT+E ALEYL   VK   + N  +E  K 
Sbjct: 270  SDQEVTQMVGRDPRYSFLLLPSIEECTKCKVYTREQALEYLDKLVKRPTYSNNAAE--KE 327

Query: 2618 DEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELA 2439
              A   L +VFLANVPV + +FRPKCIYVAVM+RR+++A+LN +A+DDKDYVGNKRLEL+
Sbjct: 328  GAAFSALRDVFLANVPVDQDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLELS 387

Query: 2438 GVLIALLFEDLFKRMNQEIKSHVDKTFSK-QRSTMFDVAKAIPP--HIISYGLEHAISSG 2268
            G LI+LLFEDLFK M  E+K+  DK   K  ++  FD+   +     II+ GLE  +S+G
Sbjct: 388  GQLISLLFEDLFKSMTTEVKNLTDKMLEKPDKAKNFDICTLLTRTRSIITLGLERTLSTG 447

Query: 2267 NWNVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPC 2088
            N+ +KRF+M+RKG+TQV+ RLS+I +LGHMTR+  QFEK+RKVSGPRALQ SQWGMLCPC
Sbjct: 448  NFEIKRFRMERKGMTQVLQRLSFIGALGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPC 507

Query: 2087 DTPEGEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFN 1908
            DTPEGE+CGLVKNLALMTHVTTDEEE PLI+LC +LGVED+  LS EELH+  ++L+IFN
Sbjct: 508  DTPEGESCGLVKNLALMTHVTTDEEEKPLISLCESLGVEDMKDLSAEELHTPDSFLVIFN 567

Query: 1907 GLMLGIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNG 1728
            GL+LG HR+P  FA  +R LRRAGKIGEFVSV+VN+KQ CVY+ASDGGRVCRPLVIAD G
Sbjct: 568  GLILGKHRRPLHFATAIRKLRRAGKIGEFVSVYVNEKQHCVYLASDGGRVCRPLVIADKG 627

Query: 1727 ISRIKEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSHIEIEPF 1548
            ISRIK+HHMKEL DG RTFDDFLR+GL+EYLDVNEENNALIALYE +AT  T+HIEIEPF
Sbjct: 628  ISRIKQHHMKELMDGVRTFDDFLRDGLLEYLDVNEENNALIALYEGDATSETTHIEIEPF 687

Query: 1547 TILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTT 1368
            TILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+LLYLLVYPQRPLLTT
Sbjct: 688  TILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQRPLLTT 747

Query: 1367 KTIELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKH 1188
            KTIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKY+A+++KH
Sbjct: 748  KTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYNAIIQKH 807

Query: 1187 PNRTQDRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNPM 1008
             N T DRI+ P  ++     R Q LD+DGIAAPGEI+R +DIYINKQ+P  TR       
Sbjct: 808  SNDTSDRILRPNRTADTAG-RMQILDDDGIAAPGEILRPYDIYINKQSPIDTRTPKTGSA 866

Query: 1007 A-LPDSEYKFTPQTYKAPEPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRHGQ 831
            A LPDS Y+   Q++K     VVD+VVL S++++ + IKFL R TRRPELGDKFSSRHGQ
Sbjct: 867  ANLPDSAYRSNAQSFKGNGGEVVDRVVLCSDKDNNMCIKFLIRHTRRPELGDKFSSRHGQ 926

Query: 830  KGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYGSA 651
            KGVCG IV QEDFPFSE+GICPDLIMNPHGFPSRMT+GKMIELLGGKAGV CG+FHYGSA
Sbjct: 927  KGVCGTIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSA 986

Query: 650  FGEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMVVD 471
            FGE SGHADKVETI  TLV  GF YSGKD IYSGITG PLQAYIFMGPIYYQKLKHMV+D
Sbjct: 987  FGERSGHADKVETISETLVSKGFNYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLD 1046

Query: 470  KMHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFEIQ 291
            KMHAR SGPR+MLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I ERLM+SSD FE+Q
Sbjct: 1047 KMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEVQ 1106

Query: 290  VCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAEA 114
            VCT CGLLGYYNHKLK G CS+CK+G+ I+TMKLPYACKL+ QELQSMNIVPRL+LA+A
Sbjct: 1107 VCTACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQSMNIVPRLKLADA 1165


>gb|ESW24958.1| hypothetical protein PHAVU_004G175000g [Phaseolus vulgaris]
          Length = 1161

 Score = 1593 bits (4125), Expect = 0.0
 Identities = 794/1139 (69%), Positives = 938/1139 (82%), Gaps = 5/1139 (0%)
 Frame = -2

Query: 3515 NERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISEN 3336
            ++R L AP+K+AVDKFQLLP FLKVRGLVKQH+DSFN+FV  EIKKI+  +AN  + +  
Sbjct: 28   DQRILTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIV--RANNLISATR 85

Query: 3335 NPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKG 3156
            +P+ YL++L++++ +PC+ ++ +  + TP  CRL D TYAAPI VDVEYT G+    R  
Sbjct: 86   HPHIYLRFLNVKIRKPCIMDESVTDDVTPQTCRLSDQTYAAPICVDVEYTHGSRDDPRLH 145

Query: 3155 KGA-ITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSK 2979
            K   + IGR+PIMLRSC C+L G+ + ELAKLGECPLDPGGYFVVKGTEKVILIQEQLSK
Sbjct: 146  KRLNVEIGRMPIMLRSCCCVLYGRDQAELAKLGECPLDPGGYFVVKGTEKVILIQEQLSK 205

Query: 2978 NRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIE 2799
            NRI+IDTD KG         T + K+KTII++++E  +L LN F + VP++ V+KAMGIE
Sbjct: 206  NRIIIDTDKKGNIAASVTSSTEKIKTKTIIVMENEKLWLHLNQFPKKVPLMAVMKAMGIE 265

Query: 2798 SDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKV 2619
            SDQE  QMVGRDPR+  +L PS + C    +YT+E ALEYL   VK   + +  +E  K 
Sbjct: 266  SDQEVTQMVGRDPRYSFLLLPSFEECRKCNVYTQEQALEYLDKMVKRSMYSSNSAE--KE 323

Query: 2618 DEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELA 2439
              A  +L +VFLANVPV   +FRPKCIYVAVM+RR+++A+LN +A+DDKDYVGNKRLEL+
Sbjct: 324  GRAFSVLRDVFLANVPVDGDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLELS 383

Query: 2438 GVLIALLFEDLFKRMNQEIKSHVDKTFSK-QRSTMFDVAKAI--PPHIISYGLEHAISSG 2268
            G LI+LLFEDLFK M  E+K+  DK   K  ++  FD++  +    +II+ GLE  +S+G
Sbjct: 384  GQLISLLFEDLFKSMATEVKNLTDKMLDKPDKARNFDISTLLNRTQNIITLGLERTLSTG 443

Query: 2267 NWNVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPC 2088
            N+ +KRF+M+RKG+TQV+ RLS+I ++GHMTR+  QFEK+RKVSGPRALQ SQWGMLCPC
Sbjct: 444  NFEIKRFRMERKGMTQVLQRLSFIGAMGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPC 503

Query: 2087 DTPEGEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFN 1908
            DTPEGE+CGLVKNLALMTHVTTDEEE+PLI++C++LGVEDL LLS EELH+  ++L+I N
Sbjct: 504  DTPEGESCGLVKNLALMTHVTTDEEESPLISMCYSLGVEDLELLSAEELHTPDSFLVILN 563

Query: 1907 GLMLGIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNG 1728
            GL+LG H++P RFA  +R LRR GKIGEFVSVFV++KQ CVY+ASDGGRVCRPLVIAD G
Sbjct: 564  GLILGKHKRPLRFATAIRKLRRRGKIGEFVSVFVHEKQNCVYLASDGGRVCRPLVIADKG 623

Query: 1727 ISRIKEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSHIEIEPF 1548
            ISRIK+HHMKEL DG RTFDDFLR+GL+EYLDVNEENN LIALYE +AT  T+HIEIEPF
Sbjct: 624  ISRIKQHHMKELMDGVRTFDDFLRDGLLEYLDVNEENNTLIALYEGDATSETTHIEIEPF 683

Query: 1547 TILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTT 1368
            TILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+LLYLLVYPQRPLLTT
Sbjct: 684  TILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQRPLLTT 743

Query: 1367 KTIELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKH 1188
            KTIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAV++KH
Sbjct: 744  KTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVIQKH 803

Query: 1187 PNRTQDRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNPM 1008
             N T DRI+ P  ++     R + LD+DGIAAPGEI++  DIYINKQ+P  TR       
Sbjct: 804  SNDTSDRILRPNRAADTAG-RMRILDDDGIAAPGEILKPFDIYINKQSPIDTRTPRTGAA 862

Query: 1007 A-LPDSEYKFTPQTYKAPEPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRHGQ 831
              LPDS Y+   Q++K     VVD+VVL S+++  + IKFL R TRRPELGDKFSSRHGQ
Sbjct: 863  GNLPDSAYRSNSQSFKGHGGEVVDRVVLCSDKDKNMCIKFLIRHTRRPELGDKFSSRHGQ 922

Query: 830  KGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYGSA 651
            KGVCG IVQQEDFPFSE+GICPDLIMNPHGFPSRMT+GKMIELLGGKAGV CG+FHYGSA
Sbjct: 923  KGVCGTIVQQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSA 982

Query: 650  FGEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMVVD 471
            FGE SGHADKVE I  TLV  GF YSGKD IYSGITG PLQAYIFMGPIYYQKLKHMV+D
Sbjct: 983  FGERSGHADKVEAISETLVSKGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLD 1042

Query: 470  KMHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFEIQ 291
            KMHAR SGPR+MLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I ERLM+SSD FE+Q
Sbjct: 1043 KMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEVQ 1102

Query: 290  VCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAEA 114
            VCT CGLLGYYNHKLK G CS CK+G++I+TMKLPYACKL+ QELQSMNIVPRL+LA+A
Sbjct: 1103 VCTACGLLGYYNHKLKTGICSYCKNGDKISTMKLPYACKLMIQELQSMNIVPRLKLADA 1161


>ref|NP_001050323.1| Os03g0403100 [Oryza sativa Japonica Group]
            gi|108708688|gb|ABF96483.1| DNA-directed RNA polymerase
            III 130 kDa polypeptide, putative, expressed [Oryza
            sativa Japonica Group] gi|113548794|dbj|BAF12237.1|
            Os03g0403100 [Oryza sativa Japonica Group]
          Length = 1155

 Score = 1575 bits (4079), Expect = 0.0
 Identities = 782/1140 (68%), Positives = 927/1140 (81%), Gaps = 9/1140 (0%)
 Frame = -2

Query: 3509 RNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNP 3330
            R+LAAPV   VDKF LLPAFLKVRGLVK+HIDSFN+F+   I+ I+  KAN ++ + NNP
Sbjct: 25   RSLAAPVTKPVDKFALLPAFLKVRGLVKEHIDSFNYFITKGIRNIV--KANNRIEARNNP 82

Query: 3329 NFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKGKG 3150
            + +L+Y  +RV  P ++   +  + TPH CRL D TY+AP+  D+EYT G +  +++ K 
Sbjct: 83   SIFLRYNSVRVGVPSVQVQYIAEKITPHFCRLTDRTYSAPVLADIEYTVGKQYELKR-KP 141

Query: 3149 AITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRI 2970
               IG LPIMLRS  C+L GK E ELA+ GECPLDPGGYF+VKGTEKVILIQEQLSKNRI
Sbjct: 142  NFIIGYLPIMLRSHACVLNGKDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRI 201

Query: 2969 LIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESDQ 2790
            +IDTDSKG         THE KSKT+I ++ E  YL+LN FT+ +PI++V+KAMG+ESDQ
Sbjct: 202  IIDTDSKGRVIASVTSSTHEIKSKTVIFMEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQ 261

Query: 2789 EFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKVDEA 2610
            E  QMVGRDPR+G +L PS+Q CA   IYT++ AL+Y+  KV     GN+K  RSK    
Sbjct: 262  EVAQMVGRDPRYGDLLYPSIQECAFERIYTQKQALQYMDDKVMYPGAGNQKEGRSK---- 317

Query: 2609 RDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELAGVL 2430
              IL +VF+A+VPV   +FRPKCIY AVMLRRM++A+LN +  DDKDYVGNKRLEL+G L
Sbjct: 318  -SILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQL 376

Query: 2429 IALLFEDLFKRMNQEIKSHVDKTFSKQRSTMFDVAKAIPPHIISYGLEHAISSGNWNVKR 2250
            I+LLFEDLFK MN      ++KT  K  S+  D++  I  +II++GLE AIS+GNW++KR
Sbjct: 377  ISLLFEDLFKTMNSNAVELMNKTSEKIHSSPLDLSLHIKENIITHGLERAISTGNWDIKR 436

Query: 2249 FKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPCDTPEGE 2070
            F+M RKGV+QV+SRLSY+ASLG+MTRI  QFEKTRK SGPRALQ SQWGMLCPCDTPEGE
Sbjct: 437  FRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGE 496

Query: 2069 ACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFNGLMLGI 1890
            ACGL KNLAL+THVTTD+EE PL+ LC++LGVEDLSLLSGEE+H+  ++L++FNGL+LG 
Sbjct: 497  ACGLTKNLALLTHVTTDQEEGPLMNLCYSLGVEDLSLLSGEEIHASGSFLVMFNGLILGK 556

Query: 1889 HRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNGISRIKE 1710
            HRQP+RFA+ +R LRR+G IGEFVS+FVN+KQ C+++ASDGGRVCRPL+IAD GI R+KE
Sbjct: 557  HRQPQRFANAMRKLRRSGIIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGIPRVKE 616

Query: 1709 HHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATE-----STSHIEIEPFT 1545
            HHMK+LRDG R+FDDFLR+GL+EYLDVNEENNALIALYE E  +     S +HIEIEP T
Sbjct: 617  HHMKQLRDGIRSFDDFLRDGLIEYLDVNEENNALIALYEHEDQDDVQRSSITHIEIEPLT 676

Query: 1544 ILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTK 1365
            ILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL R D+LLYLLVY QRPLLTTK
Sbjct: 677  ILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLLYLLVYAQRPLLTTK 736

Query: 1364 TIELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKHP 1185
            TIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCI MKKY+   +K+ 
Sbjct: 737  TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAMKKYTVTKEKYE 796

Query: 1184 NRTQDRIIGP--TSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNP 1011
                DRI+ P        +    +ALD DG AAPG IIRNHDIY+NKQTP  T+ +  + 
Sbjct: 797  GGYSDRIVKPQRDKDGALLKQNMRALDEDGFAAPGLIIRNHDIYVNKQTPRNTKRD--SG 854

Query: 1010 MALPDSEYKFTPQTYKA--PEPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRH 837
              L D +YK +P  YK    E +VVD+V+L S+ ++ L IK + R TRRPE+GDKFSSRH
Sbjct: 855  AHLTDRDYKDSPAVYKGVDGETTVVDRVMLCSDTDEKLIIKCIIRHTRRPEVGDKFSSRH 914

Query: 836  GQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYG 657
            GQKGVCG IVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGV CG+FHYG
Sbjct: 915  GQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGQFHYG 974

Query: 656  SAFGEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMV 477
            SAFGEPSG+ADKVE I  TLVKHGF Y+GKDL+YSGI G+P QAY+FMGPIYYQKLKHMV
Sbjct: 975  SAFGEPSGNADKVEDISRTLVKHGFSYNGKDLLYSGILGHPCQAYVFMGPIYYQKLKHMV 1034

Query: 476  VDKMHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFE 297
            +DKMHARASGPR++LTRQPTEGRSRDGGLRLGEMERDCLIAYGASM+I ERL+ISSD ++
Sbjct: 1035 LDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLISSDPYQ 1094

Query: 296  IQVCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAE 117
            +QVC KCGLLGYYNHKLK  +CS CK+GE +A M++PYACKLLFQELQ+MN+VPRL+L E
Sbjct: 1095 VQVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMNVVPRLKLTE 1154


>gb|AAP03366.1| putative RNA polymerase III [Oryza sativa Japonica Group]
          Length = 1174

 Score = 1575 bits (4079), Expect = 0.0
 Identities = 782/1140 (68%), Positives = 927/1140 (81%), Gaps = 9/1140 (0%)
 Frame = -2

Query: 3509 RNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNP 3330
            R+LAAPV   VDKF LLPAFLKVRGLVK+HIDSFN+F+   I+ I+  KAN ++ + NNP
Sbjct: 44   RSLAAPVTKPVDKFALLPAFLKVRGLVKEHIDSFNYFITKGIRNIV--KANNRIEARNNP 101

Query: 3329 NFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKGKG 3150
            + +L+Y  +RV  P ++   +  + TPH CRL D TY+AP+  D+EYT G +  +++ K 
Sbjct: 102  SIFLRYNSVRVGVPSVQVQYIAEKITPHFCRLTDRTYSAPVLADIEYTVGKQYELKR-KP 160

Query: 3149 AITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRI 2970
               IG LPIMLRS  C+L GK E ELA+ GECPLDPGGYF+VKGTEKVILIQEQLSKNRI
Sbjct: 161  NFIIGYLPIMLRSHACVLNGKDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRI 220

Query: 2969 LIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESDQ 2790
            +IDTDSKG         THE KSKT+I ++ E  YL+LN FT+ +PI++V+KAMG+ESDQ
Sbjct: 221  IIDTDSKGRVIASVTSSTHEIKSKTVIFMEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQ 280

Query: 2789 EFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKVDEA 2610
            E  QMVGRDPR+G +L PS+Q CA   IYT++ AL+Y+  KV     GN+K  RSK    
Sbjct: 281  EVAQMVGRDPRYGDLLYPSIQECAFERIYTQKQALQYMDDKVMYPGAGNQKEGRSK---- 336

Query: 2609 RDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELAGVL 2430
              IL +VF+A+VPV   +FRPKCIY AVMLRRM++A+LN +  DDKDYVGNKRLEL+G L
Sbjct: 337  -SILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQL 395

Query: 2429 IALLFEDLFKRMNQEIKSHVDKTFSKQRSTMFDVAKAIPPHIISYGLEHAISSGNWNVKR 2250
            I+LLFEDLFK MN      ++KT  K  S+  D++  I  +II++GLE AIS+GNW++KR
Sbjct: 396  ISLLFEDLFKTMNSNAVELMNKTSEKIHSSPLDLSLHIKENIITHGLERAISTGNWDIKR 455

Query: 2249 FKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPCDTPEGE 2070
            F+M RKGV+QV+SRLSY+ASLG+MTRI  QFEKTRK SGPRALQ SQWGMLCPCDTPEGE
Sbjct: 456  FRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGE 515

Query: 2069 ACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFNGLMLGI 1890
            ACGL KNLAL+THVTTD+EE PL+ LC++LGVEDLSLLSGEE+H+  ++L++FNGL+LG 
Sbjct: 516  ACGLTKNLALLTHVTTDQEEGPLMNLCYSLGVEDLSLLSGEEIHASGSFLVMFNGLILGK 575

Query: 1889 HRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNGISRIKE 1710
            HRQP+RFA+ +R LRR+G IGEFVS+FVN+KQ C+++ASDGGRVCRPL+IAD GI R+KE
Sbjct: 576  HRQPQRFANAMRKLRRSGIIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGIPRVKE 635

Query: 1709 HHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATE-----STSHIEIEPFT 1545
            HHMK+LRDG R+FDDFLR+GL+EYLDVNEENNALIALYE E  +     S +HIEIEP T
Sbjct: 636  HHMKQLRDGIRSFDDFLRDGLIEYLDVNEENNALIALYEHEDQDDVQRSSITHIEIEPLT 695

Query: 1544 ILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTK 1365
            ILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL R D+LLYLLVY QRPLLTTK
Sbjct: 696  ILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLLYLLVYAQRPLLTTK 755

Query: 1364 TIELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKHP 1185
            TIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCI MKKY+   +K+ 
Sbjct: 756  TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAMKKYTVTKEKYE 815

Query: 1184 NRTQDRIIGP--TSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNP 1011
                DRI+ P        +    +ALD DG AAPG IIRNHDIY+NKQTP  T+ +  + 
Sbjct: 816  GGYSDRIVKPQRDKDGALLKQNMRALDEDGFAAPGLIIRNHDIYVNKQTPRNTKRD--SG 873

Query: 1010 MALPDSEYKFTPQTYKA--PEPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRH 837
              L D +YK +P  YK    E +VVD+V+L S+ ++ L IK + R TRRPE+GDKFSSRH
Sbjct: 874  AHLTDRDYKDSPAVYKGVDGETTVVDRVMLCSDTDEKLIIKCIIRHTRRPEVGDKFSSRH 933

Query: 836  GQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYG 657
            GQKGVCG IVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGV CG+FHYG
Sbjct: 934  GQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGQFHYG 993

Query: 656  SAFGEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMV 477
            SAFGEPSG+ADKVE I  TLVKHGF Y+GKDL+YSGI G+P QAY+FMGPIYYQKLKHMV
Sbjct: 994  SAFGEPSGNADKVEDISRTLVKHGFSYNGKDLLYSGILGHPCQAYVFMGPIYYQKLKHMV 1053

Query: 476  VDKMHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFE 297
            +DKMHARASGPR++LTRQPTEGRSRDGGLRLGEMERDCLIAYGASM+I ERL+ISSD ++
Sbjct: 1054 LDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLISSDPYQ 1113

Query: 296  IQVCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAE 117
            +QVC KCGLLGYYNHKLK  +CS CK+GE +A M++PYACKLLFQELQ+MN+VPRL+L E
Sbjct: 1114 VQVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMNVVPRLKLTE 1173


>ref|XP_006656544.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Oryza
            brachyantha]
          Length = 1164

 Score = 1572 bits (4070), Expect = 0.0
 Identities = 778/1140 (68%), Positives = 928/1140 (81%), Gaps = 9/1140 (0%)
 Frame = -2

Query: 3509 RNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNP 3330
            R+LAAPV   VDKF LLPAFLKVRGLVK+HIDSFN+F+   IK I+  KAN ++ + NNP
Sbjct: 33   RSLAAPVSNPVDKFALLPAFLKVRGLVKEHIDSFNYFITKGIKNIV--KANNRIEARNNP 90

Query: 3329 NFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKGKG 3150
            + +L+Y+++RV  P ++ + +  + TPH CRL D TY+AP+  D+EYT G +  +++ K 
Sbjct: 91   SIFLRYVNVRVGVPSVQVEYIAEKITPHFCRLTDRTYSAPVLADIEYTVGKQYELKR-KP 149

Query: 3149 AITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRI 2970
               IG LPIMLRS  C+L G+ E ELA+ GECPLDPGGYF+VKGTEKVILIQEQLSKNRI
Sbjct: 150  QFIIGYLPIMLRSYACVLNGRDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRI 209

Query: 2969 LIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESDQ 2790
            +IDTDSK          THE KSKT+I ++ E  YL+LN FT+ +PI++V+KAMG+ESDQ
Sbjct: 210  IIDTDSKRRVIASVTSSTHEIKSKTVIFMEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQ 269

Query: 2789 EFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKVDEA 2610
            E VQMVGRDPR+G +L PS+Q CA   IYT++ AL+Y+  KV     GN+K  RSK    
Sbjct: 270  EVVQMVGRDPRYGDLLYPSIQECAFERIYTQKQALQYMDDKVMYPGTGNQKEGRSK---- 325

Query: 2609 RDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELAGVL 2430
              IL +VF+A+VPV+  +FRPKCIY AVMLRRM++A+LN +  DDKDYVGNKRLEL+G L
Sbjct: 326  -SILRDVFVAHVPVNSGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQL 384

Query: 2429 IALLFEDLFKRMNQEIKSHVDKTFSKQRSTMFDVAKAIPPHIISYGLEHAISSGNWNVKR 2250
            I+LLFEDLFK MN      +++T  +  S+  D++  I  +II++GLE AIS+GNW++KR
Sbjct: 385  ISLLFEDLFKTMNSNAVELMNRTSERIHSSPLDLSLHIKENIITHGLERAISTGNWDIKR 444

Query: 2249 FKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPCDTPEGE 2070
            F+M RKGV+QV+SRLSY+ASLG+MTRI  QFEKTRK SGPRALQ SQWGMLCPCDTPEGE
Sbjct: 445  FRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGE 504

Query: 2069 ACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFNGLMLGI 1890
            ACGL KNLAL+THVTTD+EE PL+ LC++LGVEDLSLLSGEE+H+  +YL++FNGL+LG 
Sbjct: 505  ACGLTKNLALLTHVTTDQEEGPLMNLCYSLGVEDLSLLSGEEIHAPGSYLVMFNGLILGK 564

Query: 1889 HRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNGISRIKE 1710
            HRQP+RFA+ +R LRR+G IGEFVS+FVN+KQ C+++ASDGGRVCRPL+IAD GISR+KE
Sbjct: 565  HRQPQRFANAMRKLRRSGIIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGISRVKE 624

Query: 1709 HHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATE-----STSHIEIEPFT 1545
            HHMKELRDG R+FDDFLR+GL+EYLDVNEENNALIALYE E  +     S +HIEIEP T
Sbjct: 625  HHMKELRDGIRSFDDFLRDGLIEYLDVNEENNALIALYEHEDQDNVQRSSITHIEIEPLT 684

Query: 1544 ILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTK 1365
            ILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGN+AYNQL R D+LLYLLVY QRPLLTTK
Sbjct: 685  ILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNVAYNQLFRADSLLYLLVYAQRPLLTTK 744

Query: 1364 TIELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKHP 1185
            TIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCI MKKY+   +K+ 
Sbjct: 745  TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAMKKYTVTKEKYE 804

Query: 1184 NRTQDRIIGP--TSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNP 1011
                DRI+ P        +    +ALD DG AAPG IIRNHDIY+NKQTP  T+ +    
Sbjct: 805  GGYSDRIVKPQRDKDGSLLKQNMRALDEDGFAAPGLIIRNHDIYVNKQTPKSTKRD-SGG 863

Query: 1010 MALPDSEYKFTPQTYKA--PEPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRH 837
              L D +YK +P  YK    E +VVD+V+L S+ ++ L IK + R TRRPE+GDKFSSRH
Sbjct: 864  AQLTDRDYKDSPAVYKGVDGETTVVDRVMLCSDTDEKLIIKCIIRHTRRPEVGDKFSSRH 923

Query: 836  GQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYG 657
            GQKGVCG IVQQEDFPFSERG+CPDLIMNPHGFPSRMTIGKMIELLGGKAG+ CG+FHYG
Sbjct: 924  GQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSRMTIGKMIELLGGKAGLSCGQFHYG 983

Query: 656  SAFGEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMV 477
            SAFGE SG ADKVE I  TL+KHGF Y+GKDL+YSGI G P Q+YIFMGPIYYQKLKHMV
Sbjct: 984  SAFGESSGTADKVEDISLTLIKHGFSYNGKDLLYSGILGNPCQSYIFMGPIYYQKLKHMV 1043

Query: 476  VDKMHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFE 297
            +DKMHARASGPR++LTRQPTEGRSRDGGLRLGEMERDCLIAYGASM+I ERL+ISSD ++
Sbjct: 1044 LDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLISSDPYQ 1103

Query: 296  IQVCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAE 117
            +QVC KCGLLGYYNHKLK  +CS CK+GE +A M++PYACKLLFQELQ+MN+VPRL+L E
Sbjct: 1104 VQVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMNVVPRLKLTE 1163


>ref|XP_004510587.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cicer
            arietinum]
          Length = 1134

 Score = 1571 bits (4068), Expect = 0.0
 Identities = 790/1134 (69%), Positives = 928/1134 (81%), Gaps = 4/1134 (0%)
 Frame = -2

Query: 3503 LAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNF 3324
            L  P K AVDKFQLLP FLK RGLVKQH+DSFN+FVN +IKKI+  +AN  V S   P+ 
Sbjct: 6    LIDPQKPAVDKFQLLPEFLKYRGLVKQHLDSFNYFVNTDIKKIV--RANNLVQSSRYPHI 63

Query: 3323 YLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGN-EIVVRKGKGA 3147
            YL++LD+R+ +P    D      +P  CRL D TYAAPI V VEYT+G+ + V++  K  
Sbjct: 64   YLRFLDVRIGKPERIFDGSSEYVSPQTCRLSDQTYAAPILVSVEYTQGSPDNVIKIPKNK 123

Query: 3146 ITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIL 2967
            + IGR+PIMLRSC C+L  + E ELAKLGECPLDPGGYFV+KGTEKVILIQEQLSKNRI+
Sbjct: 124  VVIGRMPIMLRSCCCVLYNRDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQLSKNRII 183

Query: 2966 IDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESDQE 2787
            IDTD K          T + K+KT I+++ E  +L+LN F   VP++IV+KAMG+ESD E
Sbjct: 184  IDTDKKKNITASVTSSTEKVKTKTTILMEREKMWLELNQFQTKVPLMIVMKAMGMESDHE 243

Query: 2786 FVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKVDEAR 2607
             VQM+GRDPR+G +L PS++ C   G+ T+  AL YL +K K   F   + E  K   A 
Sbjct: 244  VVQMIGRDPRYGLLLLPSIEECNKSGVSTQAQALAYLDSKAKRSMFSTMQPE--KEGRAF 301

Query: 2606 DILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELAGVLI 2427
             IL +VFLANVPVH+ +FRPKCIYVAVM+RR+++A+LN +A+DDKDYVGNKRLEL+G LI
Sbjct: 302  SILRDVFLANVPVHEDNFRPKCIYVAVMMRRILDAILNKDAMDDKDYVGNKRLELSGQLI 361

Query: 2426 ALLFEDLFKRMNQEIKSHVDKTFSK-QRSTMFDVAKAIPPHIISYGLEHAISSGNWNVKR 2250
            +LLFEDLFK M  E+++  DK   K  R+  FD    +    IS GLE  +S+GN+++KR
Sbjct: 362  SLLFEDLFKTMTTELQTLTDKYLEKPDRAKKFDFTTLLNRDYISPGLERYLSTGNFDIKR 421

Query: 2249 FKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPCDTPEGE 2070
            FKM R G+TQV+ RLS+I++LG MTR++ QFEK++KVSGPRALQ SQWGMLCPCDTPEGE
Sbjct: 422  FKMHRSGMTQVLQRLSFISALGQMTRVKPQFEKSKKVSGPRALQPSQWGMLCPCDTPEGE 481

Query: 2069 ACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFNGLMLGI 1890
            ACGLVKNLALMTHVTTD++EAPLI+LC+ LGVED+  LSGEELH+  +YL+IFNGL+LG 
Sbjct: 482  ACGLVKNLALMTHVTTDDDEAPLISLCYILGVEDIEHLSGEELHTPNSYLVIFNGLILGK 541

Query: 1889 HRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNGISRIKE 1710
            HR+P+RFA  +R LRRAG IGEFVSV++N+KQ CVY+ASDGGRVCRPLVIAD GISR+K 
Sbjct: 542  HRRPQRFATAMRNLRRAGVIGEFVSVYLNEKQCCVYLASDGGRVCRPLVIADKGISRVKA 601

Query: 1709 HHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSHIEIEPFTILGVC 1530
            HHMKEL+DG  TF+ FLR GL+EYLDVNEENNALIALYE +AT  T+HIEIEPFTILGVC
Sbjct: 602  HHMKELKDGVTTFNHFLRNGLIEYLDVNEENNALIALYEGDATPKTTHIEIEPFTILGVC 661

Query: 1529 AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTKTIELV 1350
            AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTLLYLLVYPQRPLLTTK+IELV
Sbjct: 662  AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVYPQRPLLTTKSIELV 721

Query: 1349 KYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKHPNRTQD 1170
             YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMK+Y A+ +K+ N T+D
Sbjct: 722  GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYVAIRQKYSNGTED 781

Query: 1169 RIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNPMA-LPDS 993
            RII P  ++     R Q LD+DGIAAPGEIIR +D+YINKQ+P +TR       A LPD+
Sbjct: 782  RIIRPNRAADTTG-RMQILDDDGIAAPGEIIRPNDMYINKQSPIETRATTTGSTAKLPDN 840

Query: 992  EYKFTPQTY-KAPEPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRHGQKGVCG 816
             Y+ TPQT+ K     VVD+VVL ++++  L IKFL R TRRPELGDKFSSRHGQKGVCG
Sbjct: 841  AYRSTPQTFNKCHGGEVVDRVVLCNDKDTNLCIKFLTRHTRRPELGDKFSSRHGQKGVCG 900

Query: 815  NIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYGSAFGEPS 636
                QEDFPFSE+GICPDLIMNPHGFPSRMT+GKMIELLGGKAGV CG+FHYGSAFGE S
Sbjct: 901  XXXXQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGERS 960

Query: 635  GHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMVVDKMHAR 456
            GHADKVETI  TLVKHGF Y+GKD IYSGITG PLQAYIFMGPIYYQKLKHMV+DKMHAR
Sbjct: 961  GHADKVETISETLVKHGFNYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 1020

Query: 455  ASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFEIQVCTKC 276
             +GPR ++TRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I ERLMISSD FE+QVC KC
Sbjct: 1021 GNGPRALMTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQVCRKC 1080

Query: 275  GLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAEA 114
            GLLGYYNHKLK G CS+CK+GE+I+T+KLPYACKLL QELQSMNIVPRL+LA+A
Sbjct: 1081 GLLGYYNHKLKTGICSSCKNGEQISTVKLPYACKLLMQELQSMNIVPRLKLADA 1134


>ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like isoform
            X1 [Glycine max]
          Length = 1166

 Score = 1568 bits (4060), Expect = 0.0
 Identities = 785/1139 (68%), Positives = 932/1139 (81%), Gaps = 5/1139 (0%)
 Frame = -2

Query: 3515 NERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISEN 3336
            ++R L AP+K+AVDKFQL+P FLKVRGLVKQH+DSFN+FV  +IKKI+  +AN  +++  
Sbjct: 33   DQRVLTAPIKSAVDKFQLIPEFLKVRGLVKQHLDSFNYFVRTDIKKIV--RANNLIMASR 90

Query: 3335 NPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYT-RGNEIVVRK 3159
             P+ YL++L++ + +P +  D +    TP  CRL D+TYAAPI  DVEYT R ++    K
Sbjct: 91   YPHIYLRFLNVGIGKPSMMIDEVTEGLTPQTCRLSDLTYAAPICADVEYTLRSHDKPDNK 150

Query: 3158 GKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSK 2979
                + IGR+PIMLRSC C+L GK E ELAKLGECPLDPGGYFV+KGTEKVILIQEQLSK
Sbjct: 151  RTLRVEIGRMPIMLRSCCCVLHGKDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQLSK 210

Query: 2978 NRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIE 2799
            NRI+IDTD KG         T + K+KT+I++++E  +L+LN F + VP+++V+KAMG+E
Sbjct: 211  NRIIIDTDKKGNITASVTSSTEKIKTKTVIVMENEKLWLQLNKFPKKVPLMVVMKAMGME 270

Query: 2798 SDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKV 2619
            SDQE +QMVGRDPR+  +L PS++ C    +YTKE ALEYL   VK   + +  +E  K 
Sbjct: 271  SDQEVIQMVGRDPRYSFLLLPSIEECRKCKVYTKEQALEYLDKLVKRPTYSSNSAE--KE 328

Query: 2618 DEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVGNKRLELA 2439
              A   L +VFLANVPV + +F+ KCIYVAVM+RR+++A+LN +A+DDKDYVGNKRLEL+
Sbjct: 329  GAAFSALRDVFLANVPVDQDNFQKKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLELS 388

Query: 2438 GVLIALLFEDLFKRMNQEIKSHVDKTFSK-QRSTMFDVAKAIPP--HIISYGLEHAISSG 2268
            G LI+LLFEDLFK M  E+K+  DK   K  ++  FD+   +     II+ GLE  +S+G
Sbjct: 389  GQLISLLFEDLFKSMTTEVKNLTDKMLDKPDKAKNFDICTLLTRTRSIITLGLERTLSTG 448

Query: 2267 NWNVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGMLCPC 2088
            N+ +KRF+M+RKG+TQV+ RLS+I +LGHMTR+  QFEK+RKVSGPRALQ SQWGMLCPC
Sbjct: 449  NFEIKRFRMERKGMTQVLQRLSFIGALGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPC 508

Query: 2087 DTPEGEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYLIIFN 1908
            DTPEGE+CGLVKNLALMTHVTTDEEE PLI+L ++L V  +  L  EELH+  ++L+IFN
Sbjct: 509  DTPEGESCGLVKNLALMTHVTTDEEEKPLISLFYSLDVARIEHLFAEELHTPDSFLVIFN 568

Query: 1907 GLMLGIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVIADNG 1728
            GL+LG HR+P  FA  +R LRRAG+IGEFVSV+VN+KQ CVY+ASDGGRVCRPLVIAD G
Sbjct: 569  GLILGKHRRPLHFATRIRKLRRAGEIGEFVSVYVNEKQHCVYLASDGGRVCRPLVIADKG 628

Query: 1727 ISRIKEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYESEATESTSHIEIEPF 1548
            ISRIK+HHMKEL DG  TFDDFLR+GL+EYLDVNEENNALIALYE +AT  T+HIEIEPF
Sbjct: 629  ISRIKQHHMKELMDGVCTFDDFLRDGLLEYLDVNEENNALIALYEGDATSETTHIEIEPF 688

Query: 1547 TILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTT 1368
            TILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+LLYLLVYPQRPLLTT
Sbjct: 689  TILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQRPLLTT 748

Query: 1367 KTIELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVLKKH 1188
            KTIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKY+A+++KH
Sbjct: 749  KTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYNAIIQKH 808

Query: 1187 PNRTQDRIIGPTSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTPTKTREEVKNPM 1008
             N T DRI+ P  ++     R Q LD+DGIAAPGEI+R +DIYINKQ+P  TR       
Sbjct: 809  SNDTSDRILRPNRTADTAG-RMQILDDDGIAAPGEILRPYDIYINKQSPIDTRTPKTGSA 867

Query: 1007 A-LPDSEYKFTPQTYKAPEPSVVDKVVLTSNEEDALNIKFLFRQTRRPELGDKFSSRHGQ 831
            A LPDS Y+   Q++K     VVD+VVL S++++ + IKFL R TRRPELGDKFSSRHGQ
Sbjct: 868  ANLPDSAYRSNAQSFKGNGGEVVDRVVLCSDKDNNMCIKFLIRHTRRPELGDKFSSRHGQ 927

Query: 830  KGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVCCGKFHYGSA 651
            KGVCG IV QEDFPFSE+GICPDLIMNPHGFPSRMT+GKMIELLGGKAGV CG+FHYGSA
Sbjct: 928  KGVCGTIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSA 987

Query: 650  FGEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGPIYYQKLKHMVVD 471
            FGE SGHADKVETI  TLV  GF YSGKD IYSGITG PLQAYIFMGPIYYQKLKHMV+D
Sbjct: 988  FGERSGHADKVETISETLVSKGFNYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLD 1047

Query: 470  KMHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILERLMISSDQFEIQ 291
            KMHAR SGPR+MLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I ERLM+SSD FE+Q
Sbjct: 1048 KMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEVQ 1107

Query: 290  VCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSMNIVPRLQLAEA 114
            VCT CGLLGYYNHKLK G CS+CK+G+ I+TMKLPYACKL+ QELQSMNIVPRL+LA+A
Sbjct: 1108 VCTACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQSMNIVPRLKLADA 1166


>ref|XP_004951189.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like isoform
            X1 [Setaria italica]
          Length = 1154

 Score = 1568 bits (4059), Expect = 0.0
 Identities = 784/1150 (68%), Positives = 927/1150 (80%), Gaps = 9/1150 (0%)
 Frame = -2

Query: 3539 EDDEVDYENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKA 3360
            +D +V   + R+LAAPV   VDKF LLPAFLKVRGLVK+HIDSFN+F+   I+ II  +A
Sbjct: 13   KDKDVPPPSYRSLAAPVANPVDKFALLPAFLKVRGLVKEHIDSFNYFITRGIRNII--QA 70

Query: 3359 NEKVISENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRG 3180
            N ++ + N+PN YL+Y ++ V  P ++ D    E TPH CRL D TY+APIKVD+EYT G
Sbjct: 71   NNRIEARNDPNIYLRYTNVHVGTPSVQVDYKVEEITPHFCRLTDRTYSAPIKVDIEYTVG 130

Query: 3179 NEIVVRKGKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVIL 3000
             +  ++  K  + IG +PIMLRS  CIL GK E ELA+LGECPLDPGGYF+VKGTEKVIL
Sbjct: 131  KQHELQF-KRNVLIGYMPIMLRSYACILHGKDEAELARLGECPLDPGGYFIVKGTEKVIL 189

Query: 2999 IQEQLSKNRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIV 2820
            IQEQLSKNRI+IDTDSKG         THE KSKT+I +  E  YL+LN FT+ +PI++V
Sbjct: 190  IQEQLSKNRIIIDTDSKGRVIASVTSSTHEIKSKTVITLDKEKIYLQLNQFTKPIPIIVV 249

Query: 2819 VKAMGIESDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNE 2640
            +KAMG+ESDQE VQMVGRDPR+G +L PS+Q CAS  IYT++ AL+Y+  KV     GN+
Sbjct: 250  MKAMGMESDQEVVQMVGRDPRYGDLLFPSIQECASERIYTQQQALQYMDEKVTYPGAGNQ 309

Query: 2639 KSERSKVDEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRMIEAMLNPEAVDDKDYVG 2460
            K  RSK      IL +VF+A+VPV   +FR KCIY  VMLRRM++A+LN    DDKDYVG
Sbjct: 310  KEGRSK-----SILRDVFIAHVPVKNGNFRQKCIYTGVMLRRMMDAILNANTFDDKDYVG 364

Query: 2459 NKRLELAGVLIALLFEDLFKRMNQEIKSHVDKTFSKQRSTMFDVAKAIPPHIISYGLEHA 2280
            NKRLEL+G LI+LLFEDLFK MN +    ++K   K RS+  D ++ I    I+ GLE A
Sbjct: 365  NKRLELSGQLISLLFEDLFKTMNSQAVELMNKNSDKTRSSPSDFSQLIKHESITSGLERA 424

Query: 2279 ISSGNWNVKRFKMDRKGVTQVVSRLSYIASLGHMTRIQSQFEKTRKVSGPRALQSSQWGM 2100
            IS+GNW++KRF+M RKGV+QV+SRLSY+ASLG+MTRI  QFEKTRK SGPRALQ SQWGM
Sbjct: 425  ISTGNWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGM 484

Query: 2099 LCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLITLCHTLGVEDLSLLSGEELHSRKAYL 1920
            LCPCDTPEGEACGL KNLAL+THVTTD+EE PL+ LC +LGVEDLSLLSGEE+H+  ++L
Sbjct: 485  LCPCDTPEGEACGLTKNLALLTHVTTDQEEGPLMNLCKSLGVEDLSLLSGEEIHAPGSFL 544

Query: 1919 IIFNGLMLGIHRQPKRFAHFLRILRRAGKIGEFVSVFVNDKQRCVYVASDGGRVCRPLVI 1740
            ++FNGL+LG HRQP+ FA+ +R LRR+GKIGEFVS+FVN+KQ C+++ASDGGRVCRPL+I
Sbjct: 545  VMFNGLILGKHRQPQTFANAMRNLRRSGKIGEFVSIFVNEKQHCIHIASDGGRVCRPLII 604

Query: 1739 ADNGISRIKEHHMKELRDGFRTFDDFLREGLVEYLDVNEENNALIALYE-----SEATES 1575
            AD GISR+KEHHMKELRDG R+FDDFLR+GL+EYLDVNEENNALIALYE          S
Sbjct: 605  ADKGISRVKEHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNALIALYEHVDQDDVERSS 664

Query: 1574 TSHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLV 1395
             +HIEIEP +ILGV +GLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL R D+LLYLLV
Sbjct: 665  ITHIEIEPLSILGVVSGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLLYLLV 724

Query: 1394 YPQRPLLTTKTIELVKYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMK 1215
            Y QRPLLTTKTIELV YDKLGAGQNATVAVM YSGYDIEDAIVMNK+SLDRGFGRCI MK
Sbjct: 725  YAQRPLLTTKTIELVGYDKLGAGQNATVAVMGYSGYDIEDAIVMNKSSLDRGFGRCIAMK 784

Query: 1214 KYSAVLKKHPNRTQDRIIGP--TSSSGRVDTRCQALDNDGIAAPGEIIRNHDIYINKQTP 1041
            KY+ + + +     DRI  P        V    +ALD DGIAAPG+IIRNHD+Y+NKQ+P
Sbjct: 785  KYTVIKEYYGEGVSDRIAKPQRDKDGALVKQNMRALDEDGIAAPGQIIRNHDVYVNKQSP 844

Query: 1040 TKTREEVKNPMALPDSEYKFTPQTYKA--PEPSVVDKVVLTSNEEDALNIKFLFRQTRRP 867
             K  +       L D +YK +P  YK    E +VVD+V+L S+  + L+IK + R TRRP
Sbjct: 845  -KVIDRRGAGAPLMDRDYKDSPAIYKGVDGETTVVDRVMLCSDTNEKLSIKCIIRHTRRP 903

Query: 866  ELGDKFSSRHGQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKA 687
            E+GDKFSSRHGQKGVCG IVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIEL+GGKA
Sbjct: 904  EVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELIGGKA 963

Query: 686  GVCCGKFHYGSAFGEPSGHADKVETICATLVKHGFCYSGKDLIYSGITGYPLQAYIFMGP 507
            GV CG+FHYGSAFGEPSG+ADKVE I  TL+KHGF Y+GKD +YSGI G+PL+AYIFMGP
Sbjct: 964  GVSCGRFHYGSAFGEPSGNADKVEDISNTLIKHGFSYNGKDFLYSGILGHPLEAYIFMGP 1023

Query: 506  IYYQKLKHMVVDKMHARASGPRMMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMILE 327
            IYYQKLKHMV+DKMHARASGPR++LTRQPTEGRSRDGGLRLGEMERDCLIAYGASM+I E
Sbjct: 1024 IYYQKLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFE 1083

Query: 326  RLMISSDQFEIQVCTKCGLLGYYNHKLKMGFCSTCKSGEEIATMKLPYACKLLFQELQSM 147
            RL++SSD +++QVC KCGLLGYYN+KLK  +CS CK+GE +A M+LPYACKLLFQELQSM
Sbjct: 1084 RLLLSSDPYQVQVCRKCGLLGYYNYKLKTSYCSMCKNGENMAKMRLPYACKLLFQELQSM 1143

Query: 146  NIVPRLQLAE 117
            N+VPRL+L E
Sbjct: 1144 NVVPRLKLTE 1153


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