BLASTX nr result
ID: Ephedra27_contig00015571
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00015571
(781 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001759127.1| predicted protein [Physcomitrella patens] gi... 321 2e-85
ref|NP_001237041.1| uncharacterized protein LOC100306068 [Glycin... 315 9e-84
gb|ESW19694.1| hypothetical protein PHAVU_006G147400g [Phaseolus... 315 1e-83
gb|AFK44906.1| unknown [Medicago truncatula] 314 2e-83
ref|XP_002448797.1| hypothetical protein SORBIDRAFT_06g033360 [S... 314 2e-83
ref|XP_006653045.1| PREDICTED: cleavage and polyadenylation spec... 314 2e-83
ref|XP_006353309.1| PREDICTED: cleavage and polyadenylation spec... 314 2e-83
gb|EOY23171.1| Cleavage/polyadenylation specificity factor, 25kD... 314 2e-83
ref|XP_004234388.1| PREDICTED: cleavage and polyadenylation spec... 314 2e-83
ref|NP_001141685.1| uncharacterized protein LOC100273812 [Zea ma... 314 2e-83
emb|CAJ86300.1| H0124B04.17 [Oryza sativa Indica Group] 314 2e-83
gb|ADT92189.1| cleavage and polyadenylation specificity factor 5... 313 3e-83
ref|NP_001148753.1| LOC100282369 [Zea mays] gi|195621890|gb|ACG3... 313 3e-83
ref|NP_001054301.1| Os04g0683100 [Oryza sativa Japonica Group] g... 313 4e-83
emb|CAE03439.1| OSJNBa0032F06.22 [Oryza sativa Japonica Group] 313 4e-83
ref|XP_006421904.1| hypothetical protein CICLE_v10005929mg [Citr... 313 6e-83
gb|EMJ19638.1| hypothetical protein PRUPE_ppa011679mg [Prunus pe... 313 6e-83
ref|XP_003580856.1| PREDICTED: cleavage and polyadenylation spec... 313 6e-83
ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, p... 313 6e-83
gb|ACG33128.1| cleavage and polyadenylation specificity factor 5... 313 6e-83
>ref|XP_001759127.1| predicted protein [Physcomitrella patens]
gi|162689826|gb|EDQ76196.1| predicted protein
[Physcomitrella patens]
Length = 200
Score = 321 bits (823), Expect = 2e-85
Identities = 151/190 (79%), Positives = 172/190 (90%)
Frame = -2
Query: 780 VVNLYPLGSYTFGSKEYKREKDASVSDRMSRLKDKYMNEGMRTSVEGILLVREHNHPHIL 601
VVN+YPL SYTFGSKE K EKD SV+DR++R+K YM EGMRTSVEGILLV+EHNHPH+L
Sbjct: 6 VVNVYPLSSYTFGSKEAKMEKDTSVADRLARMKQNYMKEGMRTSVEGILLVQEHNHPHVL 65
Query: 600 LLQIGNTFFKLPGGRLKVGEDETEGLKRKLSSKLAPSSPTMPYDWEIGDLAAVWWRPNFE 421
LLQIGNTFFKLPGGRLK GE+E EGLKRKL+SKLAP++ ++ +W+IG+ AA+WWRPNFE
Sbjct: 66 LLQIGNTFFKLPGGRLKTGENEIEGLKRKLTSKLAPTASSIQPEWQIGECAAMWWRPNFE 125
Query: 420 NVMYPYCPPHITKPKECKKLFVVPLPDKQYFAVPKNLKLLAVPLFELYDNVQRYGPVISA 241
++YPY PPHITKPKECKKLFVV L ++QYFAVPKNLKLLAVPLFELYDNVQRYGPVISA
Sbjct: 126 TLLYPYQPPHITKPKECKKLFVVCLSERQYFAVPKNLKLLAVPLFELYDNVQRYGPVISA 185
Query: 240 IPLQLSRFNF 211
IP QLSRFNF
Sbjct: 186 IPQQLSRFNF 195
>ref|NP_001237041.1| uncharacterized protein LOC100306068 [Glycine max]
gi|255627433|gb|ACU14061.1| unknown [Glycine max]
Length = 200
Score = 315 bits (808), Expect = 9e-84
Identities = 148/190 (77%), Positives = 166/190 (87%)
Frame = -2
Query: 780 VVNLYPLGSYTFGSKEYKREKDASVSDRMSRLKDKYMNEGMRTSVEGILLVREHNHPHIL 601
VVN YPL SYTFG+KE K EKD SV+DR++R+K YM EGMRTSVEGILLV+EHNHPHIL
Sbjct: 6 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPHIL 65
Query: 600 LLQIGNTFFKLPGGRLKVGEDETEGLKRKLSSKLAPSSPTMPYDWEIGDLAAVWWRPNFE 421
LLQIGNTF KLPGGRLK GE+E EGLKRKL+SKL +SP + DW+IG+ A+WWRPNFE
Sbjct: 66 LLQIGNTFCKLPGGRLKPGENENEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 125
Query: 420 NVMYPYCPPHITKPKECKKLFVVPLPDKQYFAVPKNLKLLAVPLFELYDNVQRYGPVISA 241
+MYPYCPPHITKPKECKKLF+V L +++YFAVPKNLKLLAVPLFELYDNVQRYGPVIS
Sbjct: 126 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVIST 185
Query: 240 IPLQLSRFNF 211
IP QLSRF F
Sbjct: 186 IPQQLSRFQF 195
>gb|ESW19694.1| hypothetical protein PHAVU_006G147400g [Phaseolus vulgaris]
Length = 200
Score = 315 bits (807), Expect = 1e-83
Identities = 148/190 (77%), Positives = 166/190 (87%)
Frame = -2
Query: 780 VVNLYPLGSYTFGSKEYKREKDASVSDRMSRLKDKYMNEGMRTSVEGILLVREHNHPHIL 601
VVN YPL SYTFG+KE K EKD SV+DR++R+K YM EGMRTSVEGILLV+EHNHPHIL
Sbjct: 6 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPHIL 65
Query: 600 LLQIGNTFFKLPGGRLKVGEDETEGLKRKLSSKLAPSSPTMPYDWEIGDLAAVWWRPNFE 421
LLQIGNTF KLPGGRLK GE+E EGLKRKL+SKL +SP + DW+IG+ A+WWRPNFE
Sbjct: 66 LLQIGNTFCKLPGGRLKPGENEMEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 125
Query: 420 NVMYPYCPPHITKPKECKKLFVVPLPDKQYFAVPKNLKLLAVPLFELYDNVQRYGPVISA 241
+MYPYCPPHITKPKECKKLF+V L +++YFAVPKNLKLLAVPLFELYDNVQRYGPVIS
Sbjct: 126 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVIST 185
Query: 240 IPLQLSRFNF 211
IP QLSRF F
Sbjct: 186 IPQQLSRFQF 195
>gb|AFK44906.1| unknown [Medicago truncatula]
Length = 200
Score = 314 bits (805), Expect = 2e-83
Identities = 148/190 (77%), Positives = 166/190 (87%)
Frame = -2
Query: 780 VVNLYPLGSYTFGSKEYKREKDASVSDRMSRLKDKYMNEGMRTSVEGILLVREHNHPHIL 601
VVN YPL SYTFG+KE K EKD SV+DR++R+K YM EGMRTSVEGILLV+EHNHPHIL
Sbjct: 6 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPHIL 65
Query: 600 LLQIGNTFFKLPGGRLKVGEDETEGLKRKLSSKLAPSSPTMPYDWEIGDLAAVWWRPNFE 421
LLQIGNTF KLPGGRLK GE+E EGLKRKL+SKL +SP + DW+IG+ A+WWRPNFE
Sbjct: 66 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPGLVPDWQIGECVAIWWRPNFE 125
Query: 420 NVMYPYCPPHITKPKECKKLFVVPLPDKQYFAVPKNLKLLAVPLFELYDNVQRYGPVISA 241
+MYPYCPPHITKPKECKKLF+V L +++YFAVPKNLKLLAVPLFELYDNVQRYGPVIS
Sbjct: 126 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVIST 185
Query: 240 IPLQLSRFNF 211
IP QLSRF F
Sbjct: 186 IPQQLSRFQF 195
>ref|XP_002448797.1| hypothetical protein SORBIDRAFT_06g033360 [Sorghum bicolor]
gi|241939980|gb|EES13125.1| hypothetical protein
SORBIDRAFT_06g033360 [Sorghum bicolor]
Length = 202
Score = 314 bits (805), Expect = 2e-83
Identities = 148/190 (77%), Positives = 167/190 (87%)
Frame = -2
Query: 780 VVNLYPLGSYTFGSKEYKREKDASVSDRMSRLKDKYMNEGMRTSVEGILLVREHNHPHIL 601
VVN+YPL +YTFG+KE K EKD SV+DR++R+K YM EGMRTSVE ILLV+EHNHPHIL
Sbjct: 8 VVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 67
Query: 600 LLQIGNTFFKLPGGRLKVGEDETEGLKRKLSSKLAPSSPTMPYDWEIGDLAAVWWRPNFE 421
LLQIGNTF KLPGGRLK GE+E EGLKRKL SKLA +SP+ P +W+IG+ AVWWRPNFE
Sbjct: 68 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQIGECVAVWWRPNFE 127
Query: 420 NVMYPYCPPHITKPKECKKLFVVPLPDKQYFAVPKNLKLLAVPLFELYDNVQRYGPVISA 241
VMYPYCPPHITKPKECKKLF+V L +++YFAVP+NLKLLAVPLFELYDNVQRYGPVIS
Sbjct: 128 TVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPVIST 187
Query: 240 IPLQLSRFNF 211
IP QLSRF F
Sbjct: 188 IPQQLSRFQF 197
>ref|XP_006653045.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Oryza brachyantha]
Length = 202
Score = 314 bits (804), Expect = 2e-83
Identities = 147/190 (77%), Positives = 167/190 (87%)
Frame = -2
Query: 780 VVNLYPLGSYTFGSKEYKREKDASVSDRMSRLKDKYMNEGMRTSVEGILLVREHNHPHIL 601
VVN+YPL +YTFG+KE K EKD SV+DR++R+K YM EGMRTSVE ILLV+EHNHPHIL
Sbjct: 8 VVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 67
Query: 600 LLQIGNTFFKLPGGRLKVGEDETEGLKRKLSSKLAPSSPTMPYDWEIGDLAAVWWRPNFE 421
LLQIGNTF KLPGGRLK GE+E EGLKRKL SKLA +SP+ P +W++G+ AVWWRPNFE
Sbjct: 68 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFE 127
Query: 420 NVMYPYCPPHITKPKECKKLFVVPLPDKQYFAVPKNLKLLAVPLFELYDNVQRYGPVISA 241
VMYPYCPPHITKPKECKKLF+V L +++YFAVP+NLKLLAVPLFELYDNVQRYGPVIS
Sbjct: 128 TVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPVIST 187
Query: 240 IPLQLSRFNF 211
IP QLSRF F
Sbjct: 188 IPQQLSRFQF 197
>ref|XP_006353309.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform X1 [Solanum tuberosum]
gi|565373499|ref|XP_006353310.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
isoform X2 [Solanum tuberosum]
gi|565373501|ref|XP_006353311.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
isoform X3 [Solanum tuberosum]
gi|565373503|ref|XP_006353312.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
isoform X4 [Solanum tuberosum]
Length = 200
Score = 314 bits (804), Expect = 2e-83
Identities = 149/190 (78%), Positives = 166/190 (87%)
Frame = -2
Query: 780 VVNLYPLGSYTFGSKEYKREKDASVSDRMSRLKDKYMNEGMRTSVEGILLVREHNHPHIL 601
VVN YPL SYTFG+KE K EKD SV+DR++R+K Y EGMRTSVEGILLV+EHNHPHIL
Sbjct: 6 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYTKEGMRTSVEGILLVQEHNHPHIL 65
Query: 600 LLQIGNTFFKLPGGRLKVGEDETEGLKRKLSSKLAPSSPTMPYDWEIGDLAAVWWRPNFE 421
LLQIGNTF KLPGGRLK GE+E EGLKRKLSSKLA +SP + +W+IG+ A+WWRPNFE
Sbjct: 66 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPGIQPNWQIGECVAIWWRPNFE 125
Query: 420 NVMYPYCPPHITKPKECKKLFVVPLPDKQYFAVPKNLKLLAVPLFELYDNVQRYGPVISA 241
+MYPYCPPHITKPKECKKLFVV L +++YFAVPKNLKLLAVPLFELYDNVQRYGPVIS
Sbjct: 126 TIMYPYCPPHITKPKECKKLFVVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVIST 185
Query: 240 IPLQLSRFNF 211
IP QLSRF F
Sbjct: 186 IPQQLSRFQF 195
>gb|EOY23171.1| Cleavage/polyadenylation specificity factor, 25kDa subunit
[Theobroma cacao]
Length = 200
Score = 314 bits (804), Expect = 2e-83
Identities = 148/190 (77%), Positives = 165/190 (86%)
Frame = -2
Query: 780 VVNLYPLGSYTFGSKEYKREKDASVSDRMSRLKDKYMNEGMRTSVEGILLVREHNHPHIL 601
VVN YPL SYTFG+KE K EKD SV+DR++R+K YM EGMRTSVE ILLV+EHNHPHIL
Sbjct: 6 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 65
Query: 600 LLQIGNTFFKLPGGRLKVGEDETEGLKRKLSSKLAPSSPTMPYDWEIGDLAAVWWRPNFE 421
LLQIGNTF KLPGGRLK GE+E EGLKRKL+SKL +SP + DW+IG+ A+WWRPNFE
Sbjct: 66 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 125
Query: 420 NVMYPYCPPHITKPKECKKLFVVPLPDKQYFAVPKNLKLLAVPLFELYDNVQRYGPVISA 241
+MYPYCPPHITKPKECKKLF+V L +K+YFAVPKNLKLLAVPLFELYDNVQRYGPVIS
Sbjct: 126 TIMYPYCPPHITKPKECKKLFLVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYGPVIST 185
Query: 240 IPLQLSRFNF 211
IP QLSRF F
Sbjct: 186 IPQQLSRFQF 195
>ref|XP_004234388.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Solanum lycopersicum]
Length = 200
Score = 314 bits (804), Expect = 2e-83
Identities = 148/190 (77%), Positives = 166/190 (87%)
Frame = -2
Query: 780 VVNLYPLGSYTFGSKEYKREKDASVSDRMSRLKDKYMNEGMRTSVEGILLVREHNHPHIL 601
VVN YPL SYTFG+KE K EKD SV+DR++R+K Y EGMRTSVEGILLV+EHNHPHIL
Sbjct: 6 VVNTYPLSSYTFGTKETKMEKDTSVADRLARMKVNYTKEGMRTSVEGILLVQEHNHPHIL 65
Query: 600 LLQIGNTFFKLPGGRLKVGEDETEGLKRKLSSKLAPSSPTMPYDWEIGDLAAVWWRPNFE 421
LLQIGNTF KLPGGRLK GE+E EGLKRKLSSKLA +SP + +W++G+ A+WWRPNFE
Sbjct: 66 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPGIQPNWQVGECVAIWWRPNFE 125
Query: 420 NVMYPYCPPHITKPKECKKLFVVPLPDKQYFAVPKNLKLLAVPLFELYDNVQRYGPVISA 241
+MYPYCPPHITKPKECKKLFVV L +++YFAVPKNLKLLAVPLFELYDNVQRYGPVIS
Sbjct: 126 TIMYPYCPPHITKPKECKKLFVVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVIST 185
Query: 240 IPLQLSRFNF 211
IP QLSRF F
Sbjct: 186 IPQQLSRFQF 195
>ref|NP_001141685.1| uncharacterized protein LOC100273812 [Zea mays]
gi|514741959|ref|XP_004960022.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
[Setaria italica] gi|194705542|gb|ACF86855.1| unknown
[Zea mays] gi|218195850|gb|EEC78277.1| hypothetical
protein OsI_17973 [Oryza sativa Indica Group]
gi|222629797|gb|EEE61929.1| hypothetical protein
OsJ_16671 [Oryza sativa Japonica Group]
gi|223944619|gb|ACN26393.1| unknown [Zea mays]
gi|414584722|tpg|DAA35293.1| TPA: cleavage and
polyadenylation specificity factor 5 [Zea mays]
Length = 202
Score = 314 bits (804), Expect = 2e-83
Identities = 147/190 (77%), Positives = 167/190 (87%)
Frame = -2
Query: 780 VVNLYPLGSYTFGSKEYKREKDASVSDRMSRLKDKYMNEGMRTSVEGILLVREHNHPHIL 601
VVN+YPL +YTFG+KE K EKD SV+DR++R+K YM EGMRTSVE ILLV+EHNHPHIL
Sbjct: 8 VVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 67
Query: 600 LLQIGNTFFKLPGGRLKVGEDETEGLKRKLSSKLAPSSPTMPYDWEIGDLAAVWWRPNFE 421
LLQIGNTF KLPGGRLK GE+E EGLKRKL SKLA +SP+ P +W++G+ AVWWRPNFE
Sbjct: 68 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFE 127
Query: 420 NVMYPYCPPHITKPKECKKLFVVPLPDKQYFAVPKNLKLLAVPLFELYDNVQRYGPVISA 241
VMYPYCPPHITKPKECKKLF+V L +++YFAVP+NLKLLAVPLFELYDNVQRYGPVIS
Sbjct: 128 TVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPVIST 187
Query: 240 IPLQLSRFNF 211
IP QLSRF F
Sbjct: 188 IPQQLSRFQF 197
>emb|CAJ86300.1| H0124B04.17 [Oryza sativa Indica Group]
Length = 2505
Score = 314 bits (804), Expect = 2e-83
Identities = 147/190 (77%), Positives = 167/190 (87%)
Frame = -2
Query: 780 VVNLYPLGSYTFGSKEYKREKDASVSDRMSRLKDKYMNEGMRTSVEGILLVREHNHPHIL 601
VVN+YPL +YTFG+KE K EKD SV+DR++R+K YM EGMRTSVE ILLV+EHNHPHIL
Sbjct: 8 VVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 67
Query: 600 LLQIGNTFFKLPGGRLKVGEDETEGLKRKLSSKLAPSSPTMPYDWEIGDLAAVWWRPNFE 421
LLQIGNTF KLPGGRLK GE+E EGLKRKL SKLA +SP+ P +W++G+ AVWWRPNFE
Sbjct: 68 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFE 127
Query: 420 NVMYPYCPPHITKPKECKKLFVVPLPDKQYFAVPKNLKLLAVPLFELYDNVQRYGPVISA 241
VMYPYCPPHITKPKECKKLF+V L +++YFAVP+NLKLLAVPLFELYDNVQRYGPVIS
Sbjct: 128 TVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPVIST 187
Query: 240 IPLQLSRFNF 211
IP QLSRF F
Sbjct: 188 IPQQLSRFQF 197
>gb|ADT92189.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
Length = 223
Score = 313 bits (803), Expect = 3e-83
Identities = 146/190 (76%), Positives = 167/190 (87%)
Frame = -2
Query: 780 VVNLYPLGSYTFGSKEYKREKDASVSDRMSRLKDKYMNEGMRTSVEGILLVREHNHPHIL 601
VVN+YPL +YTFG+KE K EKD SV+DR++R+K YM EGMRTSVE ILLV+EHNHPHIL
Sbjct: 8 VVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 67
Query: 600 LLQIGNTFFKLPGGRLKVGEDETEGLKRKLSSKLAPSSPTMPYDWEIGDLAAVWWRPNFE 421
LLQIGNTF KLPGGRLK GE+E EGLKRKL SKLA +SP+ P +W++G+ AVWWRPNFE
Sbjct: 68 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFE 127
Query: 420 NVMYPYCPPHITKPKECKKLFVVPLPDKQYFAVPKNLKLLAVPLFELYDNVQRYGPVISA 241
VMYPYCPPHITKPKECKKLF+V L +++YFAVP+NLKLLAVPLFELYDN+QRYGPVIS
Sbjct: 128 TVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNIQRYGPVIST 187
Query: 240 IPLQLSRFNF 211
IP QLSRF F
Sbjct: 188 IPQQLSRFQF 197
>ref|NP_001148753.1| LOC100282369 [Zea mays] gi|195621890|gb|ACG32775.1| cleavage and
polyadenylation specificity factor 5 [Zea mays]
gi|224032173|gb|ACN35162.1| unknown [Zea mays]
gi|413920017|gb|AFW59949.1| cleavage and polyadenylation
specificity factor 5 isoform 1 [Zea mays]
gi|413920018|gb|AFW59950.1| cleavage and polyadenylation
specificity factor 5 isoform 2 [Zea mays]
Length = 202
Score = 313 bits (803), Expect = 3e-83
Identities = 146/190 (76%), Positives = 167/190 (87%)
Frame = -2
Query: 780 VVNLYPLGSYTFGSKEYKREKDASVSDRMSRLKDKYMNEGMRTSVEGILLVREHNHPHIL 601
VVN+YPL +YTFG+KE K EKD SV+DR++R+K YM EGMRTSVE ILLV+EHNHPHIL
Sbjct: 8 VVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 67
Query: 600 LLQIGNTFFKLPGGRLKVGEDETEGLKRKLSSKLAPSSPTMPYDWEIGDLAAVWWRPNFE 421
LLQIGNTF KLPGGRLK GE+E EGLKRKL SKLA +SP+ P +W++G+ AVWWRPNFE
Sbjct: 68 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFE 127
Query: 420 NVMYPYCPPHITKPKECKKLFVVPLPDKQYFAVPKNLKLLAVPLFELYDNVQRYGPVISA 241
VMYPYCPPHITKPKECKKLF+V L +++YFAVP+NLKLLAVPLFELYDN+QRYGPVIS
Sbjct: 128 TVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNIQRYGPVIST 187
Query: 240 IPLQLSRFNF 211
IP QLSRF F
Sbjct: 188 IPQQLSRFQF 197
>ref|NP_001054301.1| Os04g0683100 [Oryza sativa Japonica Group]
gi|113565872|dbj|BAF16215.1| Os04g0683100, partial
[Oryza sativa Japonica Group]
Length = 259
Score = 313 bits (802), Expect = 4e-83
Identities = 147/190 (77%), Positives = 166/190 (87%)
Frame = -2
Query: 780 VVNLYPLGSYTFGSKEYKREKDASVSDRMSRLKDKYMNEGMRTSVEGILLVREHNHPHIL 601
VVN+YPL +YTFG+KE K EKD SV+DR +R+K YM EGMRTSVE ILLV+EHNHPHIL
Sbjct: 65 VVNVYPLANYTFGTKEPKMEKDTSVADRFARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 124
Query: 600 LLQIGNTFFKLPGGRLKVGEDETEGLKRKLSSKLAPSSPTMPYDWEIGDLAAVWWRPNFE 421
LLQIGNTF KLPGGRLK GE+E EGLKRKL SKLA +SP+ P +W++G+ AVWWRPNFE
Sbjct: 125 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFE 184
Query: 420 NVMYPYCPPHITKPKECKKLFVVPLPDKQYFAVPKNLKLLAVPLFELYDNVQRYGPVISA 241
VMYPYCPPHITKPKECKKLF+V L +++YFAVP+NLKLLAVPLFELYDNVQRYGPVIS
Sbjct: 185 TVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPVIST 244
Query: 240 IPLQLSRFNF 211
IP QLSRF F
Sbjct: 245 IPQQLSRFQF 254
>emb|CAE03439.1| OSJNBa0032F06.22 [Oryza sativa Japonica Group]
Length = 202
Score = 313 bits (802), Expect = 4e-83
Identities = 147/190 (77%), Positives = 166/190 (87%)
Frame = -2
Query: 780 VVNLYPLGSYTFGSKEYKREKDASVSDRMSRLKDKYMNEGMRTSVEGILLVREHNHPHIL 601
VVN+YPL +YTFG+KE K EKD SV+DR +R+K YM EGMRTSVE ILLV+EHNHPHIL
Sbjct: 8 VVNVYPLANYTFGTKEPKMEKDTSVADRFARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 67
Query: 600 LLQIGNTFFKLPGGRLKVGEDETEGLKRKLSSKLAPSSPTMPYDWEIGDLAAVWWRPNFE 421
LLQIGNTF KLPGGRLK GE+E EGLKRKL SKLA +SP+ P +W++G+ AVWWRPNFE
Sbjct: 68 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFE 127
Query: 420 NVMYPYCPPHITKPKECKKLFVVPLPDKQYFAVPKNLKLLAVPLFELYDNVQRYGPVISA 241
VMYPYCPPHITKPKECKKLF+V L +++YFAVP+NLKLLAVPLFELYDNVQRYGPVIS
Sbjct: 128 TVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPVIST 187
Query: 240 IPLQLSRFNF 211
IP QLSRF F
Sbjct: 188 IPQQLSRFQF 197
>ref|XP_006421904.1| hypothetical protein CICLE_v10005929mg [Citrus clementina]
gi|568874546|ref|XP_006490376.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
[Citrus sinensis] gi|557523777|gb|ESR35144.1|
hypothetical protein CICLE_v10005929mg [Citrus
clementina]
Length = 200
Score = 313 bits (801), Expect = 6e-83
Identities = 147/190 (77%), Positives = 165/190 (86%)
Frame = -2
Query: 780 VVNLYPLGSYTFGSKEYKREKDASVSDRMSRLKDKYMNEGMRTSVEGILLVREHNHPHIL 601
VVN YPL SYTFG+KE K EKD SV+DR++R+K YM EGMRTSVE ILLV+EHNHPHIL
Sbjct: 6 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 65
Query: 600 LLQIGNTFFKLPGGRLKVGEDETEGLKRKLSSKLAPSSPTMPYDWEIGDLAAVWWRPNFE 421
LLQIGNTF KLPGGRLK GE+E EGLKRKL+SKL +SP + DW+IG+ A+WWRPNFE
Sbjct: 66 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 125
Query: 420 NVMYPYCPPHITKPKECKKLFVVPLPDKQYFAVPKNLKLLAVPLFELYDNVQRYGPVISA 241
+MYPYCPPHITKPKECKKLF+V L +++YFAVPKNLKLLAVPLFELYDNVQRYGPVIS
Sbjct: 126 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVIST 185
Query: 240 IPLQLSRFNF 211
IP QLSRF F
Sbjct: 186 IPQQLSRFQF 195
>gb|EMJ19638.1| hypothetical protein PRUPE_ppa011679mg [Prunus persica]
Length = 200
Score = 313 bits (801), Expect = 6e-83
Identities = 147/190 (77%), Positives = 165/190 (86%)
Frame = -2
Query: 780 VVNLYPLGSYTFGSKEYKREKDASVSDRMSRLKDKYMNEGMRTSVEGILLVREHNHPHIL 601
VVN YPL SYTFG+KE K EKD SV+DR++R+K YM EGMRTSVE ILLV+EHNHPHIL
Sbjct: 6 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKINYMKEGMRTSVEAILLVQEHNHPHIL 65
Query: 600 LLQIGNTFFKLPGGRLKVGEDETEGLKRKLSSKLAPSSPTMPYDWEIGDLAAVWWRPNFE 421
LLQIGNTF KLPGGRLK GE+E EGLKRKL+SKL +SP + DW+IG+ A+WWRPNFE
Sbjct: 66 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 125
Query: 420 NVMYPYCPPHITKPKECKKLFVVPLPDKQYFAVPKNLKLLAVPLFELYDNVQRYGPVISA 241
+MYPYCPPHITKPKECKKLF+V L +++YFAVPKNLKLLAVPLFELYDNVQRYGPVIS
Sbjct: 126 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVIST 185
Query: 240 IPLQLSRFNF 211
IP QLSRF F
Sbjct: 186 IPQQLSRFQF 195
>ref|XP_003580856.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Brachypodium distachyon]
Length = 203
Score = 313 bits (801), Expect = 6e-83
Identities = 146/190 (76%), Positives = 167/190 (87%)
Frame = -2
Query: 780 VVNLYPLGSYTFGSKEYKREKDASVSDRMSRLKDKYMNEGMRTSVEGILLVREHNHPHIL 601
VVN+YPL +YTFG+KE K EKD SV+DR++R+K YM EGMRTSVE ILLV+EHNHPHIL
Sbjct: 9 VVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 68
Query: 600 LLQIGNTFFKLPGGRLKVGEDETEGLKRKLSSKLAPSSPTMPYDWEIGDLAAVWWRPNFE 421
LLQIGNTF KLPGGRLK GE+E +GLKRKL SKLA +SP+ P +W++G+ AVWWRPNFE
Sbjct: 69 LLQIGNTFCKLPGGRLKPGENEIDGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFE 128
Query: 420 NVMYPYCPPHITKPKECKKLFVVPLPDKQYFAVPKNLKLLAVPLFELYDNVQRYGPVISA 241
VMYPYCPPHITKPKECKKLF+V L +++YFAVP+NLKLLAVPLFELYDNVQRYGPVIS
Sbjct: 129 TVMYPYCPPHITKPKECKKLFIVHLTEREYFAVPRNLKLLAVPLFELYDNVQRYGPVIST 188
Query: 240 IPLQLSRFNF 211
IP QLSRF F
Sbjct: 189 IPQQLSRFQF 198
>ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
communis] gi|223549917|gb|EEF51404.1| pre-mRNA cleavage
factor im, 25kD subunit, putative [Ricinus communis]
Length = 200
Score = 313 bits (801), Expect = 6e-83
Identities = 147/190 (77%), Positives = 165/190 (86%)
Frame = -2
Query: 780 VVNLYPLGSYTFGSKEYKREKDASVSDRMSRLKDKYMNEGMRTSVEGILLVREHNHPHIL 601
VVN YPL SYTFG+KE K EKD SV+DR++R+K YM EGMRTSVE ILLV+EHNHPHIL
Sbjct: 6 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 65
Query: 600 LLQIGNTFFKLPGGRLKVGEDETEGLKRKLSSKLAPSSPTMPYDWEIGDLAAVWWRPNFE 421
LLQIGNTF KLPGGRLK GE+E EGLKRKL+SKL +SP + DW+IG+ A+WWRPNFE
Sbjct: 66 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 125
Query: 420 NVMYPYCPPHITKPKECKKLFVVPLPDKQYFAVPKNLKLLAVPLFELYDNVQRYGPVISA 241
+MYPYCPPHITKPKECKKLF+V L +++YFAVPKNLKLLAVPLFELYDNVQRYGPVIS
Sbjct: 126 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVIST 185
Query: 240 IPLQLSRFNF 211
IP QLSRF F
Sbjct: 186 IPQQLSRFQF 195
>gb|ACG33128.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
Length = 202
Score = 313 bits (801), Expect = 6e-83
Identities = 147/190 (77%), Positives = 167/190 (87%)
Frame = -2
Query: 780 VVNLYPLGSYTFGSKEYKREKDASVSDRMSRLKDKYMNEGMRTSVEGILLVREHNHPHIL 601
VVN+YPL +YTFG+KE K EKD SV+DR++R+K YM EGMRTSVE ILLV+EHNHPHIL
Sbjct: 8 VVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 67
Query: 600 LLQIGNTFFKLPGGRLKVGEDETEGLKRKLSSKLAPSSPTMPYDWEIGDLAAVWWRPNFE 421
LLQIGNTF KLPGGRLK GE+E EGLKRKL SKLA +SP+ P +W++G+ AVWWRPNFE
Sbjct: 68 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFE 127
Query: 420 NVMYPYCPPHITKPKECKKLFVVPLPDKQYFAVPKNLKLLAVPLFELYDNVQRYGPVISA 241
VMYPYCPPHITKPKECKKLF+V L +++YFAVP+NLKLLAVPLFELYDNVQRYGPVIS
Sbjct: 128 TVMYPYCPPHITKPKECKKLFIVHLFEREYFAVPRNLKLLAVPLFELYDNVQRYGPVIST 187
Query: 240 IPLQLSRFNF 211
IP QLSRF F
Sbjct: 188 IPQQLSRFQF 197