BLASTX nr result
ID: Ephedra27_contig00015513
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00015513
(562 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [A... 273 2e-71
gb|EOX93474.1| CCCH-type zinc fingerfamily protein with RNA-bind... 265 7e-69
ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containin... 263 2e-68
ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containin... 263 2e-68
ref|XP_006447767.1| hypothetical protein CICLE_v10014902mg [Citr... 263 2e-68
ref|XP_002320513.1| RNA recognition motif-containing family prot... 259 3e-67
ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containin... 258 7e-67
ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containin... 258 7e-67
gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus pe... 257 2e-66
gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Mo... 256 2e-66
ref|XP_006452534.1| hypothetical protein CICLE_v10007876mg [Citr... 256 3e-66
ref|XP_006452532.1| hypothetical protein CICLE_v10007876mg [Citr... 256 3e-66
ref|XP_001771275.1| predicted protein [Physcomitrella patens] gi... 256 3e-66
gb|EMJ15058.1| hypothetical protein PRUPE_ppa019338mg [Prunus pe... 254 1e-65
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu... 253 3e-65
gb|EOX93477.1| CCCH-type zinc fingerfamily protein with RNA-bind... 252 4e-65
ref|XP_001758251.1| predicted protein [Physcomitrella patens] gi... 252 4e-65
ref|XP_002302838.2| RNA recognition motif-containing family prot... 252 5e-65
ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containin... 252 5e-65
gb|EXB67424.1| Zinc finger CCCH domain-containing protein 18 [Mo... 248 7e-64
>ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [Amborella trichopoda]
gi|548839320|gb|ERM99613.1| hypothetical protein
AMTR_s00088p00158600 [Amborella trichopoda]
Length = 575
Score = 273 bits (698), Expect = 2e-71
Identities = 139/178 (78%), Positives = 154/178 (86%), Gaps = 2/178 (1%)
Frame = -3
Query: 560 LYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASR 384
LYYE+FG+TLQAEGYLTESQRHGKAGYSLTKLLARLK ++RLIDRPHGQHA+VLAEDA++
Sbjct: 271 LYYERFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHAVVLAEDAAK 330
Query: 383 YTEYKGEGGG-GATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQK 207
YTEY+ + GA AGSRQIYLTFPAESTFTEEDVSNYFRT+GPVQDVRIP QQK
Sbjct: 331 YTEYRSDRNDPGAIV----AGSRQIYLTFPAESTFTEEDVSNYFRTFGPVQDVRIPCQQK 386
Query: 206 RMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGYSS 33
RMFGFVTF+YPETVK IL KGNPH VCG+RVLVKPY+EK +L DRK EK + P Y S
Sbjct: 387 RMFGFVTFMYPETVKMILNKGNPHFVCGARVLVKPYREKSRLVDRKYPEKIDHPVYYS 444
>gb|EOX93474.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
putative isoform 1 [Theobroma cacao]
gi|508701579|gb|EOX93475.1| CCCH-type zinc fingerfamily
protein with RNA-binding domain, putative isoform 1
[Theobroma cacao] gi|508701580|gb|EOX93476.1| CCCH-type
zinc fingerfamily protein with RNA-binding domain,
putative isoform 1 [Theobroma cacao]
Length = 545
Score = 265 bits (676), Expect = 7e-69
Identities = 136/179 (75%), Positives = 149/179 (83%), Gaps = 3/179 (1%)
Frame = -3
Query: 560 LYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASR 384
LYYE +GRTLQAEGYLTESQRHGKAGYSLTKLLARLK ++RLIDRPHGQH+++LAEDA +
Sbjct: 272 LYYEMYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDAPK 331
Query: 383 YTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQ 210
Y EY GE GG A GSRQIYLTFPAESTFTEEDVSNYF +GPVQDVRIP QQ
Sbjct: 332 YLEYAGERSDPGGIVA-----GSRQIYLTFPAESTFTEEDVSNYFNKFGPVQDVRIPCQQ 386
Query: 209 KRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGYSS 33
KRMFGFVTFVY ETVK ILAKGNPH VCG+RVLVKPY+EK ++ DRK EK + P Y S
Sbjct: 387 KRMFGFVTFVYAETVKQILAKGNPHFVCGARVLVKPYREKSRVVDRKFTEKVQQPMYYS 445
>ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X4 [Citrus sinensis]
Length = 578
Score = 263 bits (673), Expect = 2e-68
Identities = 133/182 (73%), Positives = 150/182 (82%), Gaps = 3/182 (1%)
Frame = -3
Query: 560 LYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASR 384
+YYEK+G+TLQAEGYLTESQRHGKAGYSLTKLLARLK ++RLIDRPHGQH+++LAED
Sbjct: 271 MYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPN 330
Query: 383 YTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQ 210
Y EY GE GG A GSRQIYLTFPAESTFTE+DVSNYF +GPVQDVRIP QQ
Sbjct: 331 YLEYSGEKSDPGGIVA-----GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQ 385
Query: 209 KRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGYSSL 30
KRMFGFVTFV+ ETVK ILAKGNPH VCG+RVLVKPY+EK +L DRK EK + P + SL
Sbjct: 386 KRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPLFCSL 445
Query: 29 GY 24
+
Sbjct: 446 HF 447
>ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X3 [Citrus sinensis]
Length = 579
Score = 263 bits (673), Expect = 2e-68
Identities = 133/182 (73%), Positives = 150/182 (82%), Gaps = 3/182 (1%)
Frame = -3
Query: 560 LYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASR 384
+YYEK+G+TLQAEGYLTESQRHGKAGYSLTKLLARLK ++RLIDRPHGQH+++LAED
Sbjct: 271 MYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPN 330
Query: 383 YTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQ 210
Y EY GE GG A GSRQIYLTFPAESTFTE+DVSNYF +GPVQDVRIP QQ
Sbjct: 331 YLEYSGEKSDPGGIVA-----GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQ 385
Query: 209 KRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGYSSL 30
KRMFGFVTFV+ ETVK ILAKGNPH VCG+RVLVKPY+EK +L DRK EK + P + SL
Sbjct: 386 KRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPLFCSL 445
Query: 29 GY 24
+
Sbjct: 446 HF 447
>ref|XP_006447767.1| hypothetical protein CICLE_v10014902mg [Citrus clementina]
gi|557550378|gb|ESR61007.1| hypothetical protein
CICLE_v10014902mg [Citrus clementina]
Length = 524
Score = 263 bits (673), Expect = 2e-68
Identities = 133/182 (73%), Positives = 150/182 (82%), Gaps = 3/182 (1%)
Frame = -3
Query: 560 LYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASR 384
+YYEK+G+TLQAEGYLTESQRHGKAGYSLTKLLARLK ++RLIDRPHGQH+++LAED
Sbjct: 216 MYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPN 275
Query: 383 YTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQ 210
Y EY GE GG A GSRQIYLTFPAESTFTE+DVSNYF +GPVQDVRIP QQ
Sbjct: 276 YLEYSGEKSDPGGIVA-----GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQ 330
Query: 209 KRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGYSSL 30
KRMFGFVTFV+ ETVK ILAKGNPH VCG+RVLVKPY+EK +L DRK EK + P + SL
Sbjct: 331 KRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPLFCSL 390
Query: 29 GY 24
+
Sbjct: 391 HF 392
>ref|XP_002320513.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222861286|gb|EEE98828.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 554
Score = 259 bits (662), Expect = 3e-67
Identities = 131/179 (73%), Positives = 148/179 (82%), Gaps = 3/179 (1%)
Frame = -3
Query: 560 LYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASR 384
+YYEK+GR LQAEGYLTESQRHGKAGYSLTKLLARLK ++RLIDRPHGQH+++L ED +
Sbjct: 248 MYYEKYGRMLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILTEDVPK 307
Query: 383 YTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQ 210
Y EY GE GG A GSRQIYLTFPAESTFTE+DVSNYF +GPVQDVRIP QQ
Sbjct: 308 YLEYAGERNDPGGIVA-----GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQ 362
Query: 209 KRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGYSS 33
KRMFGFVTFV+ ETVK IL+KGNPH VCG+RVLVKPY+EK +L DRK AEK + P + S
Sbjct: 363 KRMFGFVTFVFAETVKQILSKGNPHHVCGARVLVKPYREKSRLVDRKYAEKIQHPFFYS 421
>ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X2 [Citrus sinensis]
Length = 581
Score = 258 bits (659), Expect = 7e-67
Identities = 133/185 (71%), Positives = 150/185 (81%), Gaps = 6/185 (3%)
Frame = -3
Query: 560 LYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-TVRLIDR---PHGQHAIVLAED 393
+YYEK+G+TLQAEGYLTESQRHGKAGYSLTKLLARLK ++RLIDR PHGQH+++LAED
Sbjct: 271 MYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRCNLPHGQHSVILAED 330
Query: 392 ASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIP 219
Y EY GE GG A GSRQIYLTFPAESTFTE+DVSNYF +GPVQDVRIP
Sbjct: 331 VPNYLEYSGEKSDPGGIVA-----GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIP 385
Query: 218 YQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGY 39
QQKRMFGFVTFV+ ETVK ILAKGNPH VCG+RVLVKPY+EK +L DRK EK + P +
Sbjct: 386 CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPLF 445
Query: 38 SSLGY 24
SL +
Sbjct: 446 CSLHF 450
>ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X1 [Citrus sinensis]
Length = 582
Score = 258 bits (659), Expect = 7e-67
Identities = 133/185 (71%), Positives = 150/185 (81%), Gaps = 6/185 (3%)
Frame = -3
Query: 560 LYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-TVRLIDR---PHGQHAIVLAED 393
+YYEK+G+TLQAEGYLTESQRHGKAGYSLTKLLARLK ++RLIDR PHGQH+++LAED
Sbjct: 271 MYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRCNLPHGQHSVILAED 330
Query: 392 ASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIP 219
Y EY GE GG A GSRQIYLTFPAESTFTE+DVSNYF +GPVQDVRIP
Sbjct: 331 VPNYLEYSGEKSDPGGIVA-----GSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIP 385
Query: 218 YQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGY 39
QQKRMFGFVTFV+ ETVK ILAKGNPH VCG+RVLVKPY+EK +L DRK EK + P +
Sbjct: 386 CQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPLF 445
Query: 38 SSLGY 24
SL +
Sbjct: 446 CSLHF 450
>gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus persica]
Length = 565
Score = 257 bits (656), Expect = 2e-66
Identities = 129/172 (75%), Positives = 146/172 (84%), Gaps = 2/172 (1%)
Frame = -3
Query: 560 LYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASR 384
+YYEK+GRTLQAEGYLTESQRHGKAGYSLTKLLARLK ++RL+DRPHGQH+++LAED +
Sbjct: 257 MYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLLDRPHGQHSVILAEDIPK 316
Query: 383 YTEYKGEGGGGATAPTSN-AGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQK 207
Y EY GE T P AGSRQIYLTFPAES FTE+DVSNYF YGPVQDVRIP QQK
Sbjct: 317 YLEYAGE----KTEPGGIIAGSRQIYLTFPAESNFTEQDVSNYFNKYGPVQDVRIPCQQK 372
Query: 206 RMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQE 51
RMFGFVTFVY ETV+ IL+KGNPH VCG+RVLVKPY+EK +L DRK +EK +
Sbjct: 373 RMFGFVTFVYAETVRHILSKGNPHFVCGARVLVKPYREKSRLVDRKFSEKMQ 424
>gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Morus notabilis]
Length = 557
Score = 256 bits (655), Expect = 2e-66
Identities = 125/169 (73%), Positives = 144/169 (85%), Gaps = 1/169 (0%)
Frame = -3
Query: 560 LYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASR 384
+YYEK+GR+LQAEGYLTESQRHGK GYSLTKLLARLK ++R++DRPHGQH+++LAED R
Sbjct: 251 MYYEKYGRSLQAEGYLTESQRHGKTGYSLTKLLARLKHSIRIVDRPHGQHSVILAEDVPR 310
Query: 383 YTEYKGEGGGGATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKR 204
Y +Y GE + GSRQIYLTFPAESTFTE+DVSNYF +GPVQDVRIP QQKR
Sbjct: 311 YLDYAGEKNEPGVIVS---GSRQIYLTFPAESTFTEQDVSNYFNKFGPVQDVRIPCQQKR 367
Query: 203 MFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEK 57
MFGFVTFVYPETV+ IL+KGNPH VCG+RVLVKPY+EK +L DRK AEK
Sbjct: 368 MFGFVTFVYPETVRQILSKGNPHFVCGARVLVKPYREKSRLVDRKFAEK 416
>ref|XP_006452534.1| hypothetical protein CICLE_v10007876mg [Citrus clementina]
gi|567921060|ref|XP_006452536.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|567921062|ref|XP_006452537.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555760|gb|ESR65774.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555762|gb|ESR65776.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555763|gb|ESR65777.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
Length = 547
Score = 256 bits (654), Expect = 3e-66
Identities = 132/180 (73%), Positives = 144/180 (80%), Gaps = 1/180 (0%)
Frame = -3
Query: 560 LYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASR 384
LYYEK+G+ LQA GYLTESQRHGKAGYSLTKLLARLK +VRLIDRPHGQHA++LAEDA +
Sbjct: 261 LYYEKYGKVLQAGGYLTESQRHGKAGYSLTKLLARLKNSVRLIDRPHGQHAVILAEDAPK 320
Query: 383 YTEYKGEGGGGATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKR 204
Y E + E T GSRQIYLTFPAESTFTE+DVSNYF TYGPV DVRIP QQKR
Sbjct: 321 YLENRNERSDPGPIVT---GSRQIYLTFPAESTFTEDDVSNYFNTYGPVDDVRIPCQQKR 377
Query: 203 MFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGYSSLGY 24
MFGFVTF +TVK ILAKGNPH VCG+RVLVKPY+EK KL DRK E+ E P Y S Y
Sbjct: 378 MFGFVTFASADTVKMILAKGNPHFVCGARVLVKPYREKSKLVDRKYQERMESPMYFSPQY 437
>ref|XP_006452532.1| hypothetical protein CICLE_v10007876mg [Citrus clementina]
gi|567921054|ref|XP_006452533.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|567921058|ref|XP_006452535.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|568841990|ref|XP_006474936.1| PREDICTED: zinc finger
CCCH domain-containing protein 18-like isoform X1
[Citrus sinensis] gi|568841992|ref|XP_006474937.1|
PREDICTED: zinc finger CCCH domain-containing protein
18-like isoform X2 [Citrus sinensis]
gi|557555758|gb|ESR65772.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555759|gb|ESR65773.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555761|gb|ESR65775.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
Length = 565
Score = 256 bits (654), Expect = 3e-66
Identities = 132/180 (73%), Positives = 144/180 (80%), Gaps = 1/180 (0%)
Frame = -3
Query: 560 LYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASR 384
LYYEK+G+ LQA GYLTESQRHGKAGYSLTKLLARLK +VRLIDRPHGQHA++LAEDA +
Sbjct: 261 LYYEKYGKVLQAGGYLTESQRHGKAGYSLTKLLARLKNSVRLIDRPHGQHAVILAEDAPK 320
Query: 383 YTEYKGEGGGGATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKR 204
Y E + E T GSRQIYLTFPAESTFTE+DVSNYF TYGPV DVRIP QQKR
Sbjct: 321 YLENRNERSDPGPIVT---GSRQIYLTFPAESTFTEDDVSNYFNTYGPVDDVRIPCQQKR 377
Query: 203 MFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGYSSLGY 24
MFGFVTF +TVK ILAKGNPH VCG+RVLVKPY+EK KL DRK E+ E P Y S Y
Sbjct: 378 MFGFVTFASADTVKMILAKGNPHFVCGARVLVKPYREKSKLVDRKYQERMESPMYFSPQY 437
>ref|XP_001771275.1| predicted protein [Physcomitrella patens]
gi|162677364|gb|EDQ63835.1| predicted protein
[Physcomitrella patens]
Length = 386
Score = 256 bits (653), Expect = 3e-66
Identities = 128/164 (78%), Positives = 142/164 (86%), Gaps = 1/164 (0%)
Frame = -3
Query: 560 LYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASR 384
LYYE+FG+TLQAEGYLTESQRHGKAGYSLTKLLARLK TV LIDRPHGQHA+VLAEDA R
Sbjct: 224 LYYERFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNTVTLIDRPHGQHAVVLAEDAHR 283
Query: 383 YTEYKGEGGGGATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKR 204
+T Y+ + G + N SRQIYLTFPAESTFTEEDV+ +FR YGPVQDVRIPYQQKR
Sbjct: 284 FTAYRSDHRGEDLSGI-NPSSRQIYLTFPAESTFTEEDVTAHFRAYGPVQDVRIPYQQKR 342
Query: 203 MFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEKGKLADR 72
MFGFVTFVY ETVK IL++GNPH +CG+RVLVKPY+EKGK DR
Sbjct: 343 MFGFVTFVYSETVKAILSEGNPHYICGARVLVKPYREKGKHGDR 386
>gb|EMJ15058.1| hypothetical protein PRUPE_ppa019338mg [Prunus persica]
Length = 564
Score = 254 bits (648), Expect = 1e-65
Identities = 125/177 (70%), Positives = 148/177 (83%), Gaps = 1/177 (0%)
Frame = -3
Query: 560 LYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARL-KTVRLIDRPHGQHAIVLAEDASR 384
+YY+KFG++LQAEGYLTESQRHGKAGYSLTKLLARL ++RLIDRPHGQHA++LAED+ +
Sbjct: 260 MYYDKFGKSLQAEGYLTESQRHGKAGYSLTKLLARLGSSIRLIDRPHGQHAVILAEDSPK 319
Query: 383 YTEYKGEGGGGATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKR 204
Y +++ E G + GSRQIYLTFPAESTF+E+DVSNYF T+GPV+DVRIP QQKR
Sbjct: 320 YADHRNEKGDPGPIVS---GSRQIYLTFPAESTFSEDDVSNYFSTFGPVEDVRIPCQQKR 376
Query: 203 MFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGYSS 33
MFGFVTFV+ +TVK ILAKGNPH VCGSRVLVKPY+EK KL DRK E+ + Y S
Sbjct: 377 MFGFVTFVHADTVKMILAKGNPHYVCGSRVLVKPYREKSKLVDRKHQERMDPAAYLS 433
>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
gi|223525472|gb|EEF28048.1| RNA binding protein,
putative [Ricinus communis]
Length = 578
Score = 253 bits (645), Expect = 3e-65
Identities = 128/179 (71%), Positives = 147/179 (82%), Gaps = 3/179 (1%)
Frame = -3
Query: 560 LYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASR 384
+YYEK+G+TLQAEGYLTESQRHGKAGYSLTKLLARLK ++R+IDRPHGQH+++L ED +
Sbjct: 274 MYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRVIDRPHGQHSVILEEDVPK 333
Query: 383 YTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQ 210
Y EY GE GG A GSRQIYLTFPAES FTE DVS YF +GPVQDVRIP QQ
Sbjct: 334 YLEYVGERNDPGGIVA-----GSRQIYLTFPAESIFTEHDVSIYFSKFGPVQDVRIPCQQ 388
Query: 209 KRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGYSS 33
KRMFGFVTF++ ETVK ILAKGNPH VCG+RVLVKPY+EK +L DRK +EK + P Y+S
Sbjct: 389 KRMFGFVTFIFVETVKQILAKGNPHYVCGARVLVKPYREKSRLIDRKFSEKLQHPMYNS 447
>gb|EOX93477.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
putative isoform 4, partial [Theobroma cacao]
Length = 430
Score = 252 bits (644), Expect = 4e-65
Identities = 128/163 (78%), Positives = 140/163 (85%), Gaps = 3/163 (1%)
Frame = -3
Query: 560 LYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASR 384
LYYE +GRTLQAEGYLTESQRHGKAGYSLTKLLARLK ++RLIDRPHGQH+++LAEDA +
Sbjct: 272 LYYEMYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDAPK 331
Query: 383 YTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQ 210
Y EY GE GG A GSRQIYLTFPAESTFTEEDVSNYF +GPVQDVRIP QQ
Sbjct: 332 YLEYAGERSDPGGIVA-----GSRQIYLTFPAESTFTEEDVSNYFNKFGPVQDVRIPCQQ 386
Query: 209 KRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEKGKL 81
KRMFGFVTFVY ETVK ILAKGNPH VCG+RVLVKPY+EK ++
Sbjct: 387 KRMFGFVTFVYAETVKQILAKGNPHFVCGARVLVKPYREKSRV 429
>ref|XP_001758251.1| predicted protein [Physcomitrella patens]
gi|162690707|gb|EDQ77073.1| predicted protein
[Physcomitrella patens]
Length = 421
Score = 252 bits (644), Expect = 4e-65
Identities = 126/164 (76%), Positives = 142/164 (86%), Gaps = 1/164 (0%)
Frame = -3
Query: 560 LYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASR 384
LYYE+FG+TLQAEGYLTESQRHGKAGYSLTKLLARLK TV LIDRPHGQHA+VLAEDA R
Sbjct: 259 LYYERFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNTVTLIDRPHGQHAVVLAEDAHR 318
Query: 383 YTEYKGEGGGGATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKR 204
+T ++ + G + N SRQIYLTFPAESTF EEDV+++FR YGPVQDVRIPYQQKR
Sbjct: 319 FTVHRSDHRGEDLSGI-NPSSRQIYLTFPAESTFCEEDVTSHFRAYGPVQDVRIPYQQKR 377
Query: 203 MFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEKGKLADR 72
MFGFVTFVY ETVK IL++GNPH +CG+RVLVKPY+EKGK DR
Sbjct: 378 MFGFVTFVYSETVKAILSEGNPHYICGARVLVKPYREKGKHGDR 421
>ref|XP_002302838.2| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|550345575|gb|EEE82111.2| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 391
Score = 252 bits (643), Expect = 5e-65
Identities = 126/166 (75%), Positives = 141/166 (84%), Gaps = 3/166 (1%)
Frame = -3
Query: 560 LYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASR 384
+YYE +GRTLQAEGYLTESQRHGKAGYSLTKLLARLK ++RLIDRPHGQH+++LAED +
Sbjct: 231 MYYEMYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDFPK 290
Query: 383 YTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQ 210
Y EY GE GG A GSRQIYLTFPAESTFTE+DVSNYF +GPVQDVRIP QQ
Sbjct: 291 YLEYAGERNDPGGIVA-----GSRQIYLTFPAESTFTEQDVSNYFSNFGPVQDVRIPCQQ 345
Query: 209 KRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEKGKLADR 72
KRMFGFVTFV+ ETVK ILAKGNPH +CG+RVLVKPY+EK +L DR
Sbjct: 346 KRMFGFVTFVFAETVKKILAKGNPHHICGARVLVKPYREKSRLIDR 391
>ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Fragaria vesca subsp. vesca]
Length = 566
Score = 252 bits (643), Expect = 5e-65
Identities = 129/179 (72%), Positives = 149/179 (83%), Gaps = 3/179 (1%)
Frame = -3
Query: 560 LYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASR 384
+YYEK+GRTLQAEGYLTESQRHGKAGYSLTKLLARLK ++RLIDRPHGQH+++LAED +
Sbjct: 259 MYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDIPK 318
Query: 383 YTEYKGEGGGGATAPTSN-AGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQK 207
Y EY GE T P AGSRQIYLTFPAES FTE+DVSNYF YGPVQDVRIP QQK
Sbjct: 319 YLEYTGE----KTEPGGIIAGSRQIYLTFPAESNFTEQDVSNYFNKYGPVQDVRIPCQQK 374
Query: 206 RMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEK-QEFPGYSS 33
RMFGFVTF+Y +TV+ IL+KGNPH VCG+RVLVKPY+EK + DRK ++K Q P ++S
Sbjct: 375 RMFGFVTFLYADTVRHILSKGNPHFVCGARVLVKPYREKSRPVDRKFSDKMQHSPCFNS 433
>gb|EXB67424.1| Zinc finger CCCH domain-containing protein 18 [Morus notabilis]
Length = 556
Score = 248 bits (633), Expect = 7e-64
Identities = 125/181 (69%), Positives = 147/181 (81%), Gaps = 1/181 (0%)
Frame = -3
Query: 560 LYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-TVRLIDRPHGQHAIVLAEDASR 384
+YYEK+G+ LQAEGYLTESQRHGKAGYSLTKLLARLK ++RLIDRPHGQHA++LAED+ +
Sbjct: 252 MYYEKYGKYLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHAVILAEDSQK 311
Query: 383 YTEYKGEGGGGATAPTSNAGSRQIYLTFPAESTFTEEDVSNYFRTYGPVQDVRIPYQQKR 204
+ + + E + GSRQIYLTFPAESTFTEEDVSNYF T+G V+DVRIP QQKR
Sbjct: 312 FFDNRSEKSDPGPIVS---GSRQIYLTFPAESTFTEEDVSNYFNTFGTVEDVRIPCQQKR 368
Query: 203 MFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEKGKLADRKPAEKQEFPGYSSLGY 24
MFGFVTF +TVK ILAKGNPH VCG+RVLVKPY+EK KL DRK +++ E P Y S Y
Sbjct: 369 MFGFVTFAIADTVKMILAKGNPHFVCGARVLVKPYREKSKLVDRKYSDRFEAPVYYSPHY 428
Query: 23 N 21
+
Sbjct: 429 S 429